simple	09-Dec-2019 00:47:27	Build BrownDog - semanticservice - Default Job #3 (BD-SEM-JOB1-3) started building on agent buildserver-2.os.ncsa.edu
simple	09-Dec-2019 00:47:27	Remote agent on host buildserver-2.os.ncsa.edu
simple	09-Dec-2019 00:47:27	Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/BD-SEM-JOB1
simple	09-Dec-2019 00:47:27	Executing build BrownDog - semanticservice - Default Job #3 (BD-SEM-JOB1-3)
simple	09-Dec-2019 00:47:27	Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
simple	09-Dec-2019 00:47:27	Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/BD-SEM-JOB1
simple	09-Dec-2019 00:47:27	Updating source code to revision: 488b32c43861f745061eefc01c38013cb6403b7b
simple	09-Dec-2019 00:47:27	Enforcing full fetch as requested revision has not been found on the configured branch
simple	09-Dec-2019 00:47:27	Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache/2c97c17bf72727f8c604198b58b2da5504ce9188/.git'.
simple	09-Dec-2019 00:47:27	Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache/2c97c17bf72727f8c604198b58b2da5504ce9188/.git/
simple	09-Dec-2019 00:48:40	Fetching 'refs/heads/*' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/standard-vocabulary-mappings.git'.
simple	09-Dec-2019 00:48:41	Warning: Permanently added '[127.0.0.1]:36507' (RSA) to the list of known hosts.
simple	09-Dec-2019 00:48:41	From ssh://127.0.0.1:36507/cats/standard-vocabulary-mappings
simple	09-Dec-2019 00:48:41	 * [new branch]      develop    -> develop
simple	09-Dec-2019 00:48:41	 * [new branch]      master     -> master
simple	09-Dec-2019 00:48:41	Checking out revision 488b32c43861f745061eefc01c38013cb6403b7b.
simple	09-Dec-2019 00:48:41	Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/BD-SEM-JOB1/.git'.
simple	09-Dec-2019 00:48:41	Cloning into '/home/bamboo/bamboo-agent-home/xml-data/build-dir/BD-SEM-JOB1'...
simple	09-Dec-2019 00:48:41	done.
simple	09-Dec-2019 00:48:41	Already on 'master'
simple	09-Dec-2019 00:48:41	Your branch is up-to-date with 'origin/master'.
simple	09-Dec-2019 00:48:41	Updated source code to revision: 488b32c43861f745061eefc01c38013cb6403b7b
simple	09-Dec-2019 00:48:41	Finished task 'Checkout Default Repository' with result: Success
simple	09-Dec-2019 00:48:41	Running pre-build action: VCS Version Collector
simple	09-Dec-2019 00:48:41	Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
command	09-Dec-2019 00:48:42	Beginning to execute external process for build 'BrownDog - semanticservice - Default Job #3 (BD-SEM-JOB1-3)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/BD-SEM-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=master\nbamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm\nbamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster\nbamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node\nbamboo_capability_system_builder_command_buckminster_4_4=/home/bamboo/buckminster-4.4/buckminster\nbamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster\nbamboo_planRepository_1_branchDisplayName=master\nbamboo_repository_revision_number=488b32c43861f745061eefc01c38013cb6403b7b\nbamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/BD-SEM-JOB1-3\nbamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build\nbamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/BD-SEM-JOB1\nbamboo_planRepository_1_name=semanticservice\nbamboo_buildKey=BD-SEM-JOB1\nbamboo_capability_system_os=linux\nbamboo_repository_166953006_revision_number=488b32c43861f745061eefc01c38013cb6403b7b\nbamboo_shortPlanName=semanticservice\nbamboo_planRepository_name=semanticservice\nbamboo_repository_166953006_name=semanticservice\nbamboo_repository_166953006_branch_name=master\nbamboo_repository_166953006_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/standard-vocabulary-mappings.git\nbamboo_buildNumber=3\nbamboo_capability_system_builder_node_grunt_6=/home/bamboo/node-v6.9.1/bin/grunt\nbamboo_shortJobName=Default Job\nbamboo_capability_system_builder_command_python3_6=/usr/bin/python3.6\nbamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/BD-SEM-JOB1-3\nbamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/standard-vocabulary-mappings.git\nbamboo_repository_166953006_git_username=\nbamboo_repository_166953006_git_branch=master\nbamboo_agentId=140673028\nbamboo_planName=BrownDog - semanticservice\nbamboo_shortPlanKey=SEM\nbamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt\nbamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node\nbamboo_shortJobKey=JOB1\nbamboo_planRepository_revision=488b32c43861f745061eefc01c38013cb6403b7b\nbamboo_buildTimeStamp=2019-12-09T00:47:27.014-06:00\nbamboo_repository_previous_revision_number=a37d3af7dfb4687b89187e507285279500d57dc3\nbamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm\nbamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1\nbamboo_planRepository_previousRevision=a37d3af7dfb4687b89187e507285279500d57dc3\nbamboo_repository_git_branch=master\nbamboo_buildResultKey=BD-SEM-JOB1-3\nbamboo_repository_branch_name=master\nbamboo_buildPlanName=BrownDog - semanticservice - Default Job\nbamboo_planRepository_1_revision=488b32c43861f745061eefc01c38013cb6403b7b\nbamboo_capability_system_builder_command_python3=/usr/bin/python3\nbamboo_repository_name=semanticservice\nbamboo_buildFailed=false\nbamboo_capability_system_docker_executable=/usr/bin/docker\nbamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt\nbamboo_planRepository_branch=master\nbamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/usr/bin/git\nbamboo_repository_git_username=\nbamboo_planRepository_1_previousRevision=a37d3af7dfb4687b89187e507285279500d57dc3\nbamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13\nbamboo_planRepository_branchDisplayName=master\nbamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs\nbamboo_planRepository_1_type=bbserver\nbamboo_planRepository_branchName=master\nbamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7\nbamboo_capability_system_hostname=buildserver-1\nbamboo_repository_166953006_previous_revision_number=a37d3af7dfb4687b89187e507285279500d57dc3\nbamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_software_mongo=/usr/bin/mongo\nbamboo_plan_storageTag=plan-166756443\nbamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs\nbamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl\nbamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=bbserver\nbamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache\nbamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/standard-vocabulary-mappings.git\nbamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node\nbamboo_capability_system_builder_node_Node_js_v9_3_0=/home/bamboo/node-v9.3.0/bin/node\nbamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4\nbamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9\nbamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp\nbamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/BD-SEM-JOB1\nbamboo_planKey=BD-SEM\nbamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/standard-vocabulary-mappings.git\nbamboo_planRepository_username=\nbamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41\nbamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh\nbamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60\nbamboo_planRepository_1_branchName=master\n
build	09-Dec-2019 00:48:42	Sending build context to Docker daemon  58.88kB
build	09-Dec-2019 00:48:42	
build	09-Dec-2019 00:48:42	Step 1/8 : FROM python:3-alpine
build	09-Dec-2019 00:48:42	3-alpine: Pulling from library/python
build	09-Dec-2019 00:48:42	89d9c30c1d48: Pulling fs layer
build	09-Dec-2019 00:48:42	910c49c00810: Pulling fs layer
build	09-Dec-2019 00:48:42	66564da92047: Pulling fs layer
build	09-Dec-2019 00:48:42	bb0265c0d9a9: Pulling fs layer
build	09-Dec-2019 00:48:42	b86dfbfbb035: Pulling fs layer
build	09-Dec-2019 00:48:42	b86dfbfbb035: Waiting
build	09-Dec-2019 00:48:42	bb0265c0d9a9: Waiting
build	09-Dec-2019 00:48:43	910c49c00810: Verifying Checksum
build	09-Dec-2019 00:48:43	910c49c00810: Download complete
build	09-Dec-2019 00:48:43	89d9c30c1d48: Verifying Checksum
build	09-Dec-2019 00:48:43	89d9c30c1d48: Download complete
build	09-Dec-2019 00:48:43	bb0265c0d9a9: Verifying Checksum
build	09-Dec-2019 00:48:43	bb0265c0d9a9: Download complete
build	09-Dec-2019 00:48:43	b86dfbfbb035: Verifying Checksum
build	09-Dec-2019 00:48:43	89d9c30c1d48: Pull complete
build	09-Dec-2019 00:48:43	66564da92047: Verifying Checksum
build	09-Dec-2019 00:48:43	66564da92047: Download complete
build	09-Dec-2019 00:48:44	910c49c00810: Pull complete
build	09-Dec-2019 00:48:45	66564da92047: Pull complete
build	09-Dec-2019 00:48:46	bb0265c0d9a9: Pull complete
build	09-Dec-2019 00:48:46	b86dfbfbb035: Pull complete
build	09-Dec-2019 00:48:46	Digest: sha256:7f465d82a49e092b609fa97cea8ea761c9aa4fa6cab05f4876150e28bf16bcc3
build	09-Dec-2019 00:48:46	Status: Downloaded newer image for python:3-alpine
build	09-Dec-2019 00:48:46	 ---> 59acf2b3028c
build	09-Dec-2019 00:48:46	Step 2/8 : MAINTAINER Sandeep Puthanveetil Satheesan <sandeeps@illinois.edu>
build	09-Dec-2019 00:48:46	 ---> Running in d361ff6cf541
build	09-Dec-2019 00:48:47	Removing intermediate container d361ff6cf541
build	09-Dec-2019 00:48:47	 ---> 1af677a963d8
build	09-Dec-2019 00:48:47	Step 3/8 : COPY ./requirements.txt /app/requirements.txt
build	09-Dec-2019 00:48:47	 ---> 4662617db1e1
build	09-Dec-2019 00:48:47	Step 4/8 : RUN pip install -r /app/requirements.txt
build	09-Dec-2019 00:48:47	 ---> Running in f33fccd35e48
build	09-Dec-2019 00:48:50	Collecting flask==1.0.2
build	09-Dec-2019 00:48:50	  Downloading https://files.pythonhosted.org/packages/7f/e7/08578774ed4536d3242b14dacb4696386634607af824ea997202cd0edb4b/Flask-1.0.2-py2.py3-none-any.whl (91kB)
build	09-Dec-2019 00:48:50	Collecting Flask-PyMongo==2.2.0
build	09-Dec-2019 00:48:50	  Downloading https://files.pythonhosted.org/packages/d5/c8/22ddacfe05893884dceef5b9ecfa683f947ba155bd63cd9d841aea29b7b7/Flask_PyMongo-2.2.0-py2.py3-none-any.whl
build	09-Dec-2019 00:48:50	Collecting gunicorn==19.9.0
build	09-Dec-2019 00:48:50	  Downloading https://files.pythonhosted.org/packages/8c/da/b8dd8deb741bff556db53902d4706774c8e1e67265f69528c14c003644e6/gunicorn-19.9.0-py2.py3-none-any.whl (112kB)
build	09-Dec-2019 00:48:50	Collecting configparser==3.5.0
build	09-Dec-2019 00:48:50	  Downloading https://files.pythonhosted.org/packages/7c/69/c2ce7e91c89dc073eb1aa74c0621c3eefbffe8216b3f9af9d3885265c01c/configparser-3.5.0.tar.gz
build	09-Dec-2019 00:48:50	Collecting Werkzeug>=0.14
build	09-Dec-2019 00:48:50	  Downloading https://files.pythonhosted.org/packages/ce/42/3aeda98f96e85fd26180534d36570e4d18108d62ae36f87694b476b83d6f/Werkzeug-0.16.0-py2.py3-none-any.whl (327kB)
build	09-Dec-2019 00:48:51	Collecting itsdangerous>=0.24
build	09-Dec-2019 00:48:51	  Downloading https://files.pythonhosted.org/packages/76/ae/44b03b253d6fade317f32c24d100b3b35c2239807046a4c953c7b89fa49e/itsdangerous-1.1.0-py2.py3-none-any.whl
build	09-Dec-2019 00:48:51	Collecting Jinja2>=2.10
build	09-Dec-2019 00:48:51	  Downloading https://files.pythonhosted.org/packages/65/e0/eb35e762802015cab1ccee04e8a277b03f1d8e53da3ec3106882ec42558b/Jinja2-2.10.3-py2.py3-none-any.whl (125kB)
build	09-Dec-2019 00:48:51	Collecting click>=5.1
build	09-Dec-2019 00:48:51	  Downloading https://files.pythonhosted.org/packages/fa/37/45185cb5abbc30d7257104c434fe0b07e5a195a6847506c074527aa599ec/Click-7.0-py2.py3-none-any.whl (81kB)
build	09-Dec-2019 00:48:52	Collecting PyMongo>=3.0
build	09-Dec-2019 00:48:52	  Downloading https://files.pythonhosted.org/packages/c0/69/9388b715d013444ae8e5d497a6825d120f6a7a67ef5aa8ddea62f601cbff/pymongo-3.9.0.tar.gz (701kB)
build	09-Dec-2019 00:48:52	Collecting MarkupSafe>=0.23
build	09-Dec-2019 00:48:52	  Downloading https://files.pythonhosted.org/packages/b9/2e/64db92e53b86efccfaea71321f597fa2e1b2bd3853d8ce658568f7a13094/MarkupSafe-1.1.1.tar.gz
build	09-Dec-2019 00:48:52	Building wheels for collected packages: configparser, PyMongo, MarkupSafe
build	09-Dec-2019 00:48:52	  Building wheel for configparser (setup.py): started
build	09-Dec-2019 00:48:53	  Building wheel for configparser (setup.py): finished with status 'done'
build	09-Dec-2019 00:48:53	  Created wheel for configparser: filename=configparser-3.5.0-cp38-none-any.whl size=20938 sha256=d929472bb790090d6d028a378c30f9ae6dd5d3a45665ab10eced9637fefea2f2
build	09-Dec-2019 00:48:53	  Stored in directory: /root/.cache/pip/wheels/a3/61/79/424ef897a2f3b14684a7de5d89e8600b460b89663e6ce9d17c
build	09-Dec-2019 00:48:53	  Building wheel for PyMongo (setup.py): started
build	09-Dec-2019 00:48:53	  Building wheel for PyMongo (setup.py): finished with status 'done'
build	09-Dec-2019 00:48:53	  Created wheel for PyMongo: filename=pymongo-3.9.0-cp38-cp38-linux_x86_64.whl size=313064 sha256=a4c78e4ba05158acab7a431473b55d2cd18e34c5df70736a80ad536a719412e3
build	09-Dec-2019 00:48:53	  Stored in directory: /root/.cache/pip/wheels/a3/3e/43/996c9a3b75b246d4a47fef3a3d17d294163bbc1ef4adacf8d4
build	09-Dec-2019 00:48:53	  Building wheel for MarkupSafe (setup.py): started
build	09-Dec-2019 00:48:53	  Building wheel for MarkupSafe (setup.py): finished with status 'done'
build	09-Dec-2019 00:48:53	  Created wheel for MarkupSafe: filename=MarkupSafe-1.1.1-cp38-none-any.whl size=12629 sha256=9dd8aac47dd73082aa2772977e39c69105d02ddc99fd7eea342a48681f3c92e5
build	09-Dec-2019 00:48:53	  Stored in directory: /root/.cache/pip/wheels/f2/aa/04/0edf07a1b8a5f5f1aed7580fffb69ce8972edc16a505916a77
build	09-Dec-2019 00:48:53	Successfully built configparser PyMongo MarkupSafe
build	09-Dec-2019 00:48:53	Installing collected packages: Werkzeug, itsdangerous, MarkupSafe, Jinja2, click, flask, PyMongo, Flask-PyMongo, gunicorn, configparser
build	09-Dec-2019 00:48:54	Successfully installed Flask-PyMongo-2.2.0 Jinja2-2.10.3 MarkupSafe-1.1.1 PyMongo-3.9.0 Werkzeug-0.16.0 click-7.0 configparser-3.5.0 flask-1.0.2 gunicorn-19.9.0 itsdangerous-1.1.0
build	09-Dec-2019 00:48:56	Removing intermediate container f33fccd35e48
build	09-Dec-2019 00:48:56	 ---> 22b62297bbb0
build	09-Dec-2019 00:48:56	Step 5/8 : COPY ./*.py /app/
build	09-Dec-2019 00:48:56	 ---> 6738614a693b
build	09-Dec-2019 00:48:56	Step 6/8 : COPY ./docker.ini /app/config.ini
build	09-Dec-2019 00:48:56	 ---> 6ea2c05cbf7d
build	09-Dec-2019 00:48:56	Step 7/8 : WORKDIR /app
build	09-Dec-2019 00:48:57	 ---> Running in 2a6bcf84c9b9
build	09-Dec-2019 00:48:57	Removing intermediate container 2a6bcf84c9b9
build	09-Dec-2019 00:48:57	 ---> 658faacfd015
build	09-Dec-2019 00:48:57	Step 8/8 : CMD [ "gunicorn", "-w 4", "-b 0.0.0.0:5000", "app:app"]
build	09-Dec-2019 00:48:57	 ---> Running in e050098fc244
build	09-Dec-2019 00:48:57	Removing intermediate container e050098fc244
build	09-Dec-2019 00:48:57	 ---> d12192b9bcf5
build	09-Dec-2019 00:48:57	Successfully built d12192b9bcf5
build	09-Dec-2019 00:48:57	Successfully tagged clowder/standard-vocabulary-mapping-service:latest
simple	09-Dec-2019 00:48:57	Finished task 'docker build' with result: Success
simple	09-Dec-2019 00:48:57	Running post build plugin 'Docker Container Cleanup'
simple	09-Dec-2019 00:48:57	Running post build plugin 'NCover Results Collector'
simple	09-Dec-2019 00:48:57	Running post build plugin 'Clover Results Collector'
simple	09-Dec-2019 00:48:57	Running post build plugin 'npm Cache Cleanup'
simple	09-Dec-2019 00:48:57	Running post build plugin 'Artifact Copier'
simple	09-Dec-2019 00:48:57	Finalising the build...
simple	09-Dec-2019 00:48:57	Stopping timer.
simple	09-Dec-2019 00:48:57	Build BD-SEM-JOB1-3 completed.
simple	09-Dec-2019 00:48:58	Running on server: post build plugin 'NCover Results Collector'
simple	09-Dec-2019 00:48:58	Running on server: post build plugin 'Build Hanging Detection Configuration'
simple	09-Dec-2019 00:48:58	Running on server: post build plugin 'Clover Delta Calculator'
simple	09-Dec-2019 00:48:58	Running on server: post build plugin 'Maven Dependencies Postprocessor'
simple	09-Dec-2019 00:48:58	All post build plugins have finished
simple	09-Dec-2019 00:48:58	Generating build results summary...
simple	09-Dec-2019 00:48:58	Saving build results to disk...
simple	09-Dec-2019 00:48:58	Logging substituted variables...
simple	09-Dec-2019 00:48:58	Indexing build results...
simple	09-Dec-2019 00:48:58	Finished building BD-SEM-JOB1-3.