simple 14-Oct-2019 13:55:23 Build Clowder - extractors-geo - Default Job #54 (CATS-EXGEO-JOB1-54) started building on agent buildserver-2.os.ncsa.edu simple 14-Oct-2019 13:55:23 Remote agent on host buildserver-2.os.ncsa.edu simple 14-Oct-2019 13:55:23 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO-JOB1 simple 14-Oct-2019 13:55:23 Executing build Clowder - extractors-geo - Default Job #54 (CATS-EXGEO-JOB1-54) simple 14-Oct-2019 13:55:23 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 14-Oct-2019 13:55:23 Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO-JOB1 simple 14-Oct-2019 13:55:23 Updating source code to revision: 6ebd1411333a267d11ecbaf83343d2e912a9268a simple 14-Oct-2019 13:55:23 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO-JOB1/.git'. simple 14-Oct-2019 13:55:23 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO-JOB1/.git/ simple 14-Oct-2019 13:55:23 Fetching 'refs/heads/master' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git'. Will try to do a shallow fetch. simple 14-Oct-2019 13:55:23 Warning: Permanently added '[127.0.0.1]:45310' (RSA) to the list of known hosts. simple 14-Oct-2019 13:55:24 From ssh://127.0.0.1:45310/cats/extractors-geo simple 14-Oct-2019 13:55:24 * [new branch] master -> master simple 14-Oct-2019 13:55:24 * [new tag] v1.0.2 -> v1.0.2 simple 14-Oct-2019 13:55:24 Checking out revision 6ebd1411333a267d11ecbaf83343d2e912a9268a. simple 14-Oct-2019 13:55:24 Already on 'master' simple 14-Oct-2019 13:55:24 Updated source code to revision: 6ebd1411333a267d11ecbaf83343d2e912a9268a simple 14-Oct-2019 13:55:24 Finished task 'Checkout Default Repository' with result: Success simple 14-Oct-2019 13:55:24 Running pre-build action: VCS Version Collector simple 14-Oct-2019 13:55:24 Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 14-Oct-2019 13:55:24 Beginning to execute external process for build 'Clowder - extractors-geo - Default Job #54 (CATS-EXGEO-JOB1-54)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=master\nbamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm\nbamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster\nbamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node\nbamboo_capability_system_builder_command_buckminster_4_4=/home/bamboo/buckminster-4.4/buckminster\nbamboo_dependency_parent_0=CATS-PYC-27\nbamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster\nbamboo_dependency_parent_total=1\nbamboo_planRepository_1_branchDisplayName=master\nbamboo_repository_revision_number=6ebd1411333a267d11ecbaf83343d2e912a9268a\nbamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-EXGEO-JOB1-54\nbamboo_repository_131072008_git_username=\nbamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build\nbamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO-JOB1\nbamboo_planRepository_1_name=extractors-geo\nbamboo_buildKey=CATS-EXGEO-JOB1\nbamboo_capability_system_os=linux\nbamboo_repository_131072008_name=extractors-geo\nbamboo_shortPlanName=extractors-geo\nbamboo_repository_131072008_git_branch=master\nbamboo_planRepository_name=extractors-geo\nbamboo_buildNumber=54\nbamboo_capability_system_builder_node_grunt_6=/home/bamboo/node-v6.9.1/bin/grunt\nbamboo_shortJobName=Default 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build 14-Oct-2019 13:55:24 Sending build context to Docker daemon 1.324MB build 14-Oct-2019 13:55:24 build 14-Oct-2019 13:55:24 Step 1/8 : FROM clowder/pyclowder:2 build 14-Oct-2019 13:55:24 ---> a3ddbd70e26e build 14-Oct-2019 13:55:24 Step 2/8 : MAINTAINER Yong Wook Kim build 14-Oct-2019 13:55:25 ---> Running in 8f742e87110a build 14-Oct-2019 13:55:26 Removing intermediate container 8f742e87110a build 14-Oct-2019 13:55:26 ---> 9e01fcc8b515 build 14-Oct-2019 13:55:26 Step 3/8 : COPY requirements.txt /home/clowder/ build 14-Oct-2019 13:55:26 ---> 4bc0c7555603 build 14-Oct-2019 13:55:26 Step 4/8 : RUN apt-get update && apt-get -y install python-dev python-pip python-dev build-essential python-numpy gdal-bin python-gdal python-scipy software-properties-common && apt-add-repository ppa:ubuntugis/ppa && pip install --upgrade pip==9.0.3 && pip install -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 14-Oct-2019 13:55:27 ---> Running in 1be65d32c924 build 14-Oct-2019 13:55:29 Get:1 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 14-Oct-2019 13:55:29 Get:2 http://security.ubuntu.com/ubuntu xenial-security InRelease [109 kB] build 14-Oct-2019 13:55:29 Get:3 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 14-Oct-2019 13:55:29 Get:4 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [971 kB] build 14-Oct-2019 13:55:30 Get:5 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 14-Oct-2019 13:55:30 Get:6 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 14-Oct-2019 13:55:30 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 14-Oct-2019 13:55:31 Get:8 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [587 kB] build 14-Oct-2019 13:55:31 Get:9 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 14-Oct-2019 13:55:31 Get:10 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [6276 B] build 14-Oct-2019 13:55:31 Get:11 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 14-Oct-2019 13:55:32 Get:12 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 14-Oct-2019 13:55:33 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1348 kB] build 14-Oct-2019 13:55:34 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 14-Oct-2019 13:55:34 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [991 kB] build 14-Oct-2019 13:55:35 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [19.2 kB] build 14-Oct-2019 13:55:35 Get:17 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7942 B] build 14-Oct-2019 13:55:35 Get:18 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8807 B] build 14-Oct-2019 13:55:35 Fetched 16.1 MB in 6s (2396 kB/s) build 14-Oct-2019 13:55:36 Reading package lists... build 14-Oct-2019 13:55:37 Reading package lists... build 14-Oct-2019 13:55:37 Building dependency tree... build 14-Oct-2019 13:55:37 Reading state information... build 14-Oct-2019 13:55:38 The following additional packages will be installed: build 14-Oct-2019 13:55:38 binutils bzip2 ca-certificates cpp cpp-5 cron dbus dh-python build 14-Oct-2019 13:55:38 distro-info-data dpkg-dev fakeroot fontconfig-config fonts-dejavu-core g++ build 14-Oct-2019 13:55:38 g++-5 gcc gcc-5 gir1.2-glib-2.0 ifupdown iproute2 isc-dhcp-client build 14-Oct-2019 13:55:38 isc-dhcp-common iso-codes libaec0 libalgorithm-diff-perl build 14-Oct-2019 13:55:38 libalgorithm-diff-xs-perl libalgorithm-merge-perl libapt-inst2.0 build 14-Oct-2019 13:55:38 libarmadillo6 libarpack2 libasan2 libatm1 libatomic1 libblas-common libblas3 build 14-Oct-2019 13:55:38 libc-dev-bin libc6-dev libcap-ng0 libcc1-0 libcilkrts5 libdap17v5 build 14-Oct-2019 13:55:38 libdapclient6v5 libdbus-1-3 libdbus-glib-1-2 libdns-export162 libdpkg-perl build 14-Oct-2019 13:55:38 libepsilon1 libexpat1-dev libfakeroot libfile-fcntllock-perl libfontconfig1 build 14-Oct-2019 13:55:38 libfreetype6 libfreexl1 libgcc-5-dev libgdal1i libgdbm3 libgeos-3.5.0 build 14-Oct-2019 13:55:38 libgeos-c1v5 libgfortran3 libgif7 libgirepository-1.0-1 libglib2.0-0 build 14-Oct-2019 13:55:38 libglib2.0-data libgomp1 libhdf4-0-alt libhdf5-10 libicu55 libisc-export160 build 14-Oct-2019 13:55:38 libisl15 libitm1 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libkmlbase1 build 14-Oct-2019 13:55:38 libkmldom1 libkmlengine1 liblapack3 liblcms2-2 liblsan0 libltdl7 libminizip1 build 14-Oct-2019 13:55:38 libmnl0 libmpc3 libmpdec2 libmpfr4 libmpx0 libmysqlclient20 libnetcdf11 build 14-Oct-2019 13:55:38 libodbc1 libogdi3.2 libopenjp2-7 libperl5.22 libpng12-0 libpoppler58 libpq5 build 14-Oct-2019 13:55:38 libproj9 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 build 14-Oct-2019 13:55:38 libpython2.7-dev libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib build 14-Oct-2019 13:55:38 libquadmath0 libspatialite7 libstdc++-5-dev libsuperlu4 libsz2 libtiff5 build 14-Oct-2019 13:55:38 libtsan0 libubsan0 liburiparser1 libwebp5 libwebpmux1 libxerces-c3.1 libxml2 build 14-Oct-2019 13:55:38 libxtables11 linux-libc-dev lsb-release make manpages manpages-dev build 14-Oct-2019 13:55:38 mysql-common netbase odbcinst odbcinst1debian2 openssl patch perl build 14-Oct-2019 13:55:38 perl-modules-5.22 powermgmt-base proj-bin proj-data python python-all build 14-Oct-2019 13:55:38 python-all-dev python-apt-common python-decorator python-imaging build 14-Oct-2019 13:55:38 python-minimal python-pil python-pip-whl python-pkg-resources build 14-Oct-2019 13:55:38 python-setuptools python-wheel python2.7-dev python3 python3-apt build 14-Oct-2019 13:55:38 python3-dbus python3-gi python3-minimal python3-pycurl build 14-Oct-2019 13:55:38 python3-software-properties python3.5 python3.5-minimal rename sgml-base build 14-Oct-2019 13:55:38 shared-mime-info ucf unattended-upgrades xdg-user-dirs xml-core xz-utils build 14-Oct-2019 13:55:38 Suggested packages: build 14-Oct-2019 13:55:38 binutils-doc bzip2-doc cpp-doc gcc-5-locales anacron logrotate checksecurity build 14-Oct-2019 13:55:38 exim4 | postfix | mail-transport-agent dbus-user-session | dbus-x11 build 14-Oct-2019 13:55:38 debian-keyring g++-multilib g++-5-multilib gcc-5-doc libstdc++6-5-dbg build 14-Oct-2019 13:55:38 gcc-multilib autoconf automake libtool flex bison gdb gcc-doc gcc-5-multilib build 14-Oct-2019 13:55:38 libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan2-dbg build 14-Oct-2019 13:55:38 liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx0-dbg build 14-Oct-2019 13:55:38 libquadmath0-dbg ppp rdnssd iproute2-doc resolvconf avahi-autoipd build 14-Oct-2019 13:55:38 isc-dhcp-client-ddns apparmor isoquery glibc-doc libhdf4-doc libhdf4-alt-dev build 14-Oct-2019 13:55:38 hdf4-tools libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc build 14-Oct-2019 13:55:38 odbc-postgresql tdsodbc unixodbc-bin ogdi-bin poppler-data libstdc++-5-doc build 14-Oct-2019 13:55:38 lsb make-doc man-browser ed diffutils-doc perl-doc libterm-readline-gnu-perl build 14-Oct-2019 13:55:38 | libterm-readline-perl-perl python-doc python-tk gfortran python-nose build 14-Oct-2019 13:55:38 python-numpy-dbg python-numpy-doc python-pil-doc python-pil-dbg build 14-Oct-2019 13:55:38 python-scipy-doc python-setuptools-doc python3-doc python3-tk python3-venv build 14-Oct-2019 13:55:38 python3-apt-dbg python-apt-doc python-dbus-doc python3-dbus-dbg build 14-Oct-2019 13:55:38 libcurl4-gnutls-dev python-pycurl-doc python3-pycurl-dbg python3.5-venv build 14-Oct-2019 13:55:38 python3.5-doc binfmt-support sgml-base-doc bsd-mailx default-mta build 14-Oct-2019 13:55:38 | mail-transport-agent needrestart debhelper build 14-Oct-2019 13:55:38 The following NEW packages will be installed: build 14-Oct-2019 13:55:38 binutils build-essential bzip2 ca-certificates cpp cpp-5 cron dbus dh-python build 14-Oct-2019 13:55:38 distro-info-data dpkg-dev fakeroot fontconfig-config fonts-dejavu-core g++ build 14-Oct-2019 13:55:38 g++-5 gcc gcc-5 gdal-bin gir1.2-glib-2.0 ifupdown iproute2 isc-dhcp-client build 14-Oct-2019 13:55:38 isc-dhcp-common iso-codes libaec0 libalgorithm-diff-perl build 14-Oct-2019 13:55:38 libalgorithm-diff-xs-perl libalgorithm-merge-perl libapt-inst2.0 build 14-Oct-2019 13:55:38 libarmadillo6 libarpack2 libasan2 libatm1 libatomic1 libblas-common libblas3 build 14-Oct-2019 13:55:38 libc-dev-bin libc6-dev libcap-ng0 libcc1-0 libcilkrts5 libdap17v5 build 14-Oct-2019 13:55:38 libdapclient6v5 libdbus-1-3 libdbus-glib-1-2 libdns-export162 libdpkg-perl build 14-Oct-2019 13:55:38 libepsilon1 libexpat1-dev libfakeroot libfile-fcntllock-perl libfontconfig1 build 14-Oct-2019 13:55:38 libfreetype6 libfreexl1 libgcc-5-dev libgdal1i libgdbm3 libgeos-3.5.0 build 14-Oct-2019 13:55:38 libgeos-c1v5 libgfortran3 libgif7 libgirepository-1.0-1 libglib2.0-0 build 14-Oct-2019 13:55:38 libglib2.0-data libgomp1 libhdf4-0-alt libhdf5-10 libicu55 libisc-export160 build 14-Oct-2019 13:55:38 libisl15 libitm1 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libkmlbase1 build 14-Oct-2019 13:55:38 libkmldom1 libkmlengine1 liblapack3 liblcms2-2 liblsan0 libltdl7 libminizip1 build 14-Oct-2019 13:55:38 libmnl0 libmpc3 libmpdec2 libmpfr4 libmpx0 libmysqlclient20 libnetcdf11 build 14-Oct-2019 13:55:38 libodbc1 libogdi3.2 libopenjp2-7 libperl5.22 libpng12-0 libpoppler58 libpq5 build 14-Oct-2019 13:55:38 libproj9 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 build 14-Oct-2019 13:55:38 libpython2.7-dev libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib build 14-Oct-2019 13:55:38 libquadmath0 libspatialite7 libstdc++-5-dev libsuperlu4 libsz2 libtiff5 build 14-Oct-2019 13:55:38 libtsan0 libubsan0 liburiparser1 libwebp5 libwebpmux1 libxerces-c3.1 libxml2 build 14-Oct-2019 13:55:38 libxtables11 linux-libc-dev lsb-release make manpages manpages-dev build 14-Oct-2019 13:55:38 mysql-common netbase odbcinst odbcinst1debian2 openssl patch perl build 14-Oct-2019 13:55:38 perl-modules-5.22 powermgmt-base proj-bin proj-data python python-all build 14-Oct-2019 13:55:38 python-all-dev python-apt-common python-decorator python-dev python-gdal build 14-Oct-2019 13:55:38 python-imaging python-minimal python-numpy python-pil python-pip build 14-Oct-2019 13:55:38 python-pip-whl python-pkg-resources python-scipy python-setuptools build 14-Oct-2019 13:55:38 python-wheel python2.7-dev python3 python3-apt python3-dbus python3-gi build 14-Oct-2019 13:55:38 python3-minimal python3-pycurl python3-software-properties python3.5 build 14-Oct-2019 13:55:38 python3.5-minimal rename sgml-base shared-mime-info build 14-Oct-2019 13:55:38 software-properties-common ucf unattended-upgrades xdg-user-dirs xml-core build 14-Oct-2019 13:55:38 xz-utils build 14-Oct-2019 13:55:38 0 upgraded, 173 newly installed, 0 to remove and 5 not upgraded. build 14-Oct-2019 13:55:38 Need to get 130 MB of archives. build 14-Oct-2019 13:55:38 After this operation, 460 MB of additional disk space will be used. build 14-Oct-2019 13:55:38 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 cron amd64 3.0pl1-128ubuntu2 [68.4 kB] build 14-Oct-2019 13:55:39 Get:2 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatm1 amd64 1:2.5.1-1.5 [24.2 kB] build 14-Oct-2019 13:55:39 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmnl0 amd64 1.0.3-5 [12.0 kB] build 14-Oct-2019 13:55:39 Get:4 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython3.5-minimal amd64 3.5.2-2ubuntu0~16.04.9 [524 kB] build 14-Oct-2019 13:55:40 Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3.5-minimal amd64 3.5.2-2ubuntu0~16.04.9 [1593 kB] build 14-Oct-2019 13:55:41 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-minimal amd64 3.5.1-3 [23.3 kB] build 14-Oct-2019 13:55:41 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpdec2 amd64 2.4.2-1 [82.6 kB] build 14-Oct-2019 13:55:42 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython3.5-stdlib amd64 3.5.2-2ubuntu0~16.04.9 [2137 kB] build 14-Oct-2019 13:55:42 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3.5 amd64 3.5.2-2ubuntu0~16.04.9 [165 kB] build 14-Oct-2019 13:55:43 Get:10 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpython3-stdlib amd64 3.5.1-3 [6818 B] build 14-Oct-2019 13:55:43 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dh-python all 2.20151103ubuntu1.2 [73.9 kB] build 14-Oct-2019 13:55:44 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3 amd64 3.5.1-3 [8710 B] build 14-Oct-2019 13:55:44 Get:13 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgdbm3 amd64 1.8.3-13.1 [16.9 kB] build 14-Oct-2019 13:55:44 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libglib2.0-0 amd64 2.48.2-0ubuntu4.4 [1120 kB] build 14-Oct-2019 13:55:45 Get:15 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 14-Oct-2019 13:55:45 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 14-Oct-2019 13:55:46 Get:17 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 14-Oct-2019 13:55:46 Get:18 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 14-Oct-2019 13:55:46 Get:19 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 14-Oct-2019 13:55:47 Get:20 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-modules-5.22 all 5.22.1-9ubuntu0.6 [2629 kB] build 14-Oct-2019 13:55:48 Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libperl5.22 amd64 5.22.1-9ubuntu0.6 [3405 kB] build 14-Oct-2019 13:55:49 Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl amd64 5.22.1-9ubuntu0.6 [237 kB] build 14-Oct-2019 13:55:50 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-minimal amd64 2.7.12-1~16.04 [28.1 kB] build 14-Oct-2019 13:55:50 Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython-stdlib amd64 2.7.12-1~16.04 [7768 B] build 14-Oct-2019 13:55:50 Get:25 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python amd64 2.7.12-1~16.04 [137 kB] build 14-Oct-2019 13:55:51 Get:26 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 14-Oct-2019 13:55:51 Get:27 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpfr4 amd64 3.1.4-1 [191 kB] build 14-Oct-2019 13:55:52 Get:28 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpc3 amd64 1.0.3-1 [39.7 kB] build 14-Oct-2019 13:55:52 Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 bzip2 amd64 1.0.6-8ubuntu0.2 [32.5 kB] build 14-Oct-2019 13:55:52 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 distro-info-data all 0.28ubuntu0.12 [4638 B] build 14-Oct-2019 13:55:52 Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 iproute2 amd64 4.3.0-1ubuntu3.16.04.5 [523 kB] build 14-Oct-2019 13:55:53 Get:32 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ifupdown amd64 0.8.10ubuntu1.4 [54.9 kB] build 14-Oct-2019 13:55:54 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libisc-export160 amd64 1:9.10.3.dfsg.P4-8ubuntu1.15 [153 kB] build 14-Oct-2019 13:55:54 Get:34 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdns-export162 amd64 1:9.10.3.dfsg.P4-8ubuntu1.15 [665 kB] build 14-Oct-2019 13:55:55 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-client amd64 4.3.3-5ubuntu12.10 [224 kB] build 14-Oct-2019 13:55:56 Get:36 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-common amd64 4.3.3-5ubuntu12.10 [105 kB] build 14-Oct-2019 13:55:56 Get:37 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libapt-inst2.0 amd64 1.2.32 [55.8 kB] build 14-Oct-2019 13:55:56 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 14-Oct-2019 13:55:57 Get:39 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxtables11 amd64 1.6.0-2ubuntu3 [27.2 kB] build 14-Oct-2019 13:55:57 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 lsb-release all 9.20160110ubuntu0.2 [11.8 kB] build 14-Oct-2019 13:55:57 Get:41 http://archive.ubuntu.com/ubuntu xenial/main amd64 netbase all 5.3 [12.9 kB] build 14-Oct-2019 13:55:58 Get:42 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 14-Oct-2019 13:55:58 Get:43 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 openssl amd64 1.0.2g-1ubuntu4.15 [492 kB] build 14-Oct-2019 13:55:59 Get:44 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ca-certificates all 20170717~16.04.2 [167 kB] build 14-Oct-2019 13:55:59 Get:45 http://archive.ubuntu.com/ubuntu xenial/main amd64 libcap-ng0 amd64 0.7.7-1 [10.9 kB] build 14-Oct-2019 13:56:00 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdbus-1-3 amd64 1.10.6-1ubuntu3.4 [161 kB] build 14-Oct-2019 13:56:00 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dbus amd64 1.10.6-1ubuntu3.4 [142 kB] build 14-Oct-2019 13:56:01 Get:48 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgirepository-1.0-1 amd64 1.46.0-3ubuntu1 [88.3 kB] build 14-Oct-2019 13:56:01 Get:49 http://archive.ubuntu.com/ubuntu xenial/main amd64 gir1.2-glib-2.0 amd64 1.46.0-3ubuntu1 [127 kB] build 14-Oct-2019 13:56:02 Get:50 http://archive.ubuntu.com/ubuntu xenial/main amd64 iso-codes all 3.65-1 [2268 kB] build 14-Oct-2019 13:56:03 Get:51 http://archive.ubuntu.com/ubuntu xenial/main amd64 libdbus-glib-1-2 amd64 0.106-1 [67.1 kB] build 14-Oct-2019 13:56:03 Get:52 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libglib2.0-data all 2.48.2-0ubuntu4.4 [131 kB] build 14-Oct-2019 13:56:04 Get:53 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 14-Oct-2019 13:56:05 Get:54 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 14-Oct-2019 13:56:06 Get:55 http://archive.ubuntu.com/ubuntu xenial/main amd64 manpages all 4.04-2 [1087 kB] build 14-Oct-2019 13:56:06 Get:56 http://archive.ubuntu.com/ubuntu xenial/main amd64 powermgmt-base all 1.31+nmu1 [7178 B] build 14-Oct-2019 13:56:07 Get:57 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-apt-common all 1.1.0~beta1ubuntu0.16.04.5 [16.2 kB] build 14-Oct-2019 13:56:07 Get:58 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3-apt amd64 1.1.0~beta1ubuntu0.16.04.5 [138 kB] build 14-Oct-2019 13:56:07 Get:59 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-dbus amd64 1.2.0-3 [83.1 kB] build 14-Oct-2019 13:56:08 Get:60 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-gi amd64 3.20.0-0ubuntu1 [153 kB] build 14-Oct-2019 13:56:08 Get:61 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 shared-mime-info amd64 1.5-2ubuntu0.2 [405 kB] build 14-Oct-2019 13:56:09 Get:62 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 xdg-user-dirs amd64 0.15-2ubuntu6.16.04.1 [61.8 kB] build 14-Oct-2019 13:56:10 Get:63 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 14-Oct-2019 13:56:10 Get:64 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 binutils amd64 2.26.1-1ubuntu1~16.04.8 [2312 kB] build 14-Oct-2019 13:56:11 Get:65 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc-dev-bin amd64 2.23-0ubuntu11 [68.5 kB] build 14-Oct-2019 13:56:11 Get:66 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 linux-libc-dev amd64 4.4.0-165.193 [838 kB] build 14-Oct-2019 13:56:12 Get:67 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc6-dev amd64 2.23-0ubuntu11 [2086 kB] build 14-Oct-2019 13:56:13 Get:68 http://archive.ubuntu.com/ubuntu xenial/main amd64 libisl15 amd64 0.16.1-1 [524 kB] build 14-Oct-2019 13:56:14 Get:69 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 cpp-5 amd64 5.4.0-6ubuntu1~16.04.11 [7660 kB] build 14-Oct-2019 13:56:15 Get:70 http://archive.ubuntu.com/ubuntu xenial/main amd64 cpp amd64 4:5.3.1-1ubuntu1 [27.7 kB] build 14-Oct-2019 13:56:15 Get:71 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcc1-0 amd64 5.4.0-6ubuntu1~16.04.11 [38.8 kB] build 14-Oct-2019 13:56:15 Get:72 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgomp1 amd64 5.4.0-6ubuntu1~16.04.11 [55.0 kB] build 14-Oct-2019 13:56:16 Get:73 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libitm1 amd64 5.4.0-6ubuntu1~16.04.11 [27.4 kB] build 14-Oct-2019 13:56:16 Get:74 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libatomic1 amd64 5.4.0-6ubuntu1~16.04.11 [8896 B] build 14-Oct-2019 13:56:16 Get:75 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasan2 amd64 5.4.0-6ubuntu1~16.04.11 [264 kB] build 14-Oct-2019 13:56:17 Get:76 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 liblsan0 amd64 5.4.0-6ubuntu1~16.04.11 [105 kB] build 14-Oct-2019 13:56:18 Get:77 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtsan0 amd64 5.4.0-6ubuntu1~16.04.11 [244 kB] build 14-Oct-2019 13:56:18 Get:78 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libubsan0 amd64 5.4.0-6ubuntu1~16.04.11 [95.4 kB] build 14-Oct-2019 13:56:19 Get:79 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcilkrts5 amd64 5.4.0-6ubuntu1~16.04.11 [40.1 kB] build 14-Oct-2019 13:56:19 Get:80 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmpx0 amd64 5.4.0-6ubuntu1~16.04.11 [9748 B] build 14-Oct-2019 13:56:19 Get:81 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.11 [131 kB] build 14-Oct-2019 13:56:20 Get:82 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgcc-5-dev amd64 5.4.0-6ubuntu1~16.04.11 [2229 kB] build 14-Oct-2019 13:56:21 Get:83 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5 amd64 5.4.0-6ubuntu1~16.04.11 [8417 kB] build 14-Oct-2019 13:56:22 Get:84 http://archive.ubuntu.com/ubuntu xenial/main amd64 gcc amd64 4:5.3.1-1ubuntu1 [5244 B] build 14-Oct-2019 13:56:22 Get:85 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++-5-dev amd64 5.4.0-6ubuntu1~16.04.11 [1426 kB] build 14-Oct-2019 13:56:23 Get:86 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 g++-5 amd64 5.4.0-6ubuntu1~16.04.11 [8310 kB] build 14-Oct-2019 13:56:24 Get:87 http://archive.ubuntu.com/ubuntu xenial/main amd64 g++ amd64 4:5.3.1-1ubuntu1 [1504 B] build 14-Oct-2019 13:56:24 Get:88 http://archive.ubuntu.com/ubuntu xenial/main amd64 make amd64 4.1-6 [151 kB] build 14-Oct-2019 13:56:25 Get:89 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdpkg-perl all 1.18.4ubuntu1.6 [195 kB] build 14-Oct-2019 13:56:25 Get:90 http://archive.ubuntu.com/ubuntu xenial/main amd64 xz-utils amd64 5.1.1alpha+20120614-2ubuntu2 [78.8 kB] build 14-Oct-2019 13:56:26 Get:91 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 patch amd64 2.7.5-1ubuntu0.16.04.2 [90.8 kB] build 14-Oct-2019 13:56:26 Get:92 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dpkg-dev all 1.18.4ubuntu1.6 [584 kB] build 14-Oct-2019 13:56:27 Get:93 http://archive.ubuntu.com/ubuntu xenial/main amd64 build-essential amd64 12.1ubuntu2 [4758 B] build 14-Oct-2019 13:56:27 Get:94 http://archive.ubuntu.com/ubuntu xenial/main amd64 libfakeroot amd64 1.20.2-1ubuntu1 [25.5 kB] build 14-Oct-2019 13:56:28 Get:95 http://archive.ubuntu.com/ubuntu xenial/main amd64 fakeroot amd64 1.20.2-1ubuntu1 [61.8 kB] build 14-Oct-2019 13:56:28 Get:96 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 14-Oct-2019 13:56:29 Get:97 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 14-Oct-2019 13:56:29 Get:98 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.11 [260 kB] build 14-Oct-2019 13:56:30 Get:99 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 14-Oct-2019 13:56:31 Get:100 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 14-Oct-2019 13:56:31 Get:101 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarmadillo6 amd64 1:6.500.5+dfsg-1 [75.2 kB] build 14-Oct-2019 13:56:32 Get:102 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 14-Oct-2019 13:56:32 Get:103 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 14-Oct-2019 13:56:33 Get:104 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libepsilon1 amd64 0.9.2-3ubuntu1 [41.0 kB] build 14-Oct-2019 13:56:33 Get:105 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 libfreexl1 amd64 1.0.2-1ubuntu0.1 [33.9 kB] build 14-Oct-2019 13:56:34 Get:106 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-3.5.0 amd64 3.5.0-1ubuntu2 [477 kB] build 14-Oct-2019 13:56:34 Get:107 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-c1v5 amd64 3.5.0-1ubuntu2 [52.4 kB] build 14-Oct-2019 13:56:35 Get:108 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgif7 amd64 5.1.4-0.3~16.04.1 [30.5 kB] build 14-Oct-2019 13:56:35 Get:109 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] build 14-Oct-2019 13:56:35 Get:110 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf4-0-alt amd64 4.2.10-3.2 [264 kB] build 14-Oct-2019 13:56:36 Get:111 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libaec0 amd64 0.3.2-1 [18.0 kB] build 14-Oct-2019 13:56:36 Get:112 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsz2 amd64 0.3.2-1 [5048 B] build 14-Oct-2019 13:56:36 Get:113 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 libhdf5-10 amd64 1.8.16+docs-4ubuntu1.1 [997 kB] build 14-Oct-2019 13:56:37 Get:114 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjasper1 amd64 1.900.1-debian1-2.4ubuntu1.2 [131 kB] build 14-Oct-2019 13:56:38 Get:115 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libminizip1 amd64 1.1-8 [20.3 kB] build 14-Oct-2019 13:56:38 Get:116 http://archive.ubuntu.com/ubuntu xenial/universe amd64 liburiparser1 amd64 0.8.4-1 [38.0 kB] build 14-Oct-2019 13:56:39 Get:117 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlbase1 amd64 1.3.0-1 [43.9 kB] build 14-Oct-2019 13:56:39 Get:118 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmldom1 amd64 1.3.0-1 [175 kB] build 14-Oct-2019 13:56:39 Get:119 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlengine1 amd64 1.3.0-1 [77.1 kB] build 14-Oct-2019 13:56:40 Get:120 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 mysql-common all 5.7.27-0ubuntu0.16.04.1 [14.7 kB] build 14-Oct-2019 13:56:40 Get:121 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmysqlclient20 amd64 5.7.27-0ubuntu0.16.04.1 [811 kB] build 14-Oct-2019 13:56:41 Get:122 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libnetcdf11 amd64 1:4.4.0-2 [286 kB] build 14-Oct-2019 13:56:42 Get:123 http://archive.ubuntu.com/ubuntu xenial/main amd64 libltdl7 amd64 2.4.6-0.1 [38.3 kB] build 14-Oct-2019 13:56:42 Get:124 http://archive.ubuntu.com/ubuntu xenial/main amd64 libodbc1 amd64 2.3.1-4.1 [180 kB] build 14-Oct-2019 13:56:43 Get:125 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-data all 4.9.2-2 [4004 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files found: doing nothing. build 14-Oct-2019 14:02:14 Setting up sgml-base (1.26+nmu4ubuntu1) ... build 14-Oct-2019 14:02:14 Setting up libjpeg-turbo8:amd64 (1.4.2-0ubuntu3.1) ... build 14-Oct-2019 14:02:14 Setting up libblas-common (3.6.0-2ubuntu2) ... build 14-Oct-2019 14:02:15 Setting up libblas3 (3.6.0-2ubuntu2) ... build 14-Oct-2019 14:02:15 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 14-Oct-2019 14:02:15 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 14-Oct-2019 14:02:16 Setting up perl-modules-5.22 (5.22.1-9ubuntu0.6) ... build 14-Oct-2019 14:02:16 Setting up libperl5.22:amd64 (5.22.1-9ubuntu0.6) ... build 14-Oct-2019 14:02:17 Setting up perl (5.22.1-9ubuntu0.6) ... build 14-Oct-2019 14:02:17 update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode build 14-Oct-2019 14:02:17 Setting up libpython-stdlib:amd64 (2.7.12-1~16.04) ... build 14-Oct-2019 14:02:18 Setting up python (2.7.12-1~16.04) ... build 14-Oct-2019 14:02:18 Setting up libjbig0:amd64 (2.1-3.1) ... build 14-Oct-2019 14:02:19 Setting up libmpfr4:amd64 (3.1.4-1) ... build 14-Oct-2019 14:02:19 Setting up libmpc3:amd64 (1.0.3-1) ... build 14-Oct-2019 14:02:19 Setting up bzip2 (1.0.6-8ubuntu0.2) ... build 14-Oct-2019 14:02:20 Setting up distro-info-data (0.28ubuntu0.12) ... build 14-Oct-2019 14:02:20 Setting up iproute2 (4.3.0-1ubuntu3.16.04.5) ... build 14-Oct-2019 14:02:21 Setting up ifupdown (0.8.10ubuntu1.4) ... build 14-Oct-2019 14:02:23 Creating /etc/network/interfaces. build 14-Oct-2019 14:02:23 Setting up libisc-export160 (1:9.10.3.dfsg.P4-8ubuntu1.15) ... build 14-Oct-2019 14:02:24 Setting up libdns-export162 (1:9.10.3.dfsg.P4-8ubuntu1.15) ... build 14-Oct-2019 14:02:24 Setting up isc-dhcp-client (4.3.3-5ubuntu12.10) ... build 14-Oct-2019 14:02:25 Setting up isc-dhcp-common (4.3.3-5ubuntu12.10) ... build 14-Oct-2019 14:02:26 Setting up libapt-inst2.0:amd64 (1.2.32) ... build 14-Oct-2019 14:02:26 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ... build 14-Oct-2019 14:02:26 Setting up libxtables11:amd64 (1.6.0-2ubuntu3) ... build 14-Oct-2019 14:02:27 Setting up netbase (5.3) ... build 14-Oct-2019 14:02:27 Setting up ucf (3.0036) ... build 14-Oct-2019 14:02:28 debconf: unable to initialize frontend: Dialog build 14-Oct-2019 14:02:28 debconf: (TERM is not set, so the dialog frontend is not usable.) build 14-Oct-2019 14:02:28 debconf: falling back to frontend: Readline build 14-Oct-2019 14:02:28 Setting up openssl (1.0.2g-1ubuntu4.15) ... build 14-Oct-2019 14:02:28 Setting up ca-certificates (20170717~16.04.2) ... build 14-Oct-2019 14:02:28 debconf: unable to initialize frontend: Dialog build 14-Oct-2019 14:02:28 debconf: (TERM is not set, so the dialog frontend is not usable.) build 14-Oct-2019 14:02:28 debconf: falling back to frontend: Readline build 14-Oct-2019 14:02:29 Setting up libcap-ng0:amd64 (0.7.7-1) ... build 14-Oct-2019 14:02:30 Setting up 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libpython-dev:amd64 (2.7.12-1~16.04) ... build 14-Oct-2019 14:05:16 Setting up libpython-all-dev:amd64 (2.7.12-1~16.04) ... build 14-Oct-2019 14:05:16 Setting up manpages-dev (4.04-2) ... build 14-Oct-2019 14:05:17 Setting up python-all (2.7.12-1~16.04) ... build 14-Oct-2019 14:05:18 Setting up python2.7-dev (2.7.12-1ubuntu0~16.04.9) ... build 14-Oct-2019 14:05:19 Setting up python-dev (2.7.12-1~16.04) ... build 14-Oct-2019 14:05:19 Setting up python-all-dev (2.7.12-1~16.04) ... build 14-Oct-2019 14:05:20 Setting up python-decorator (4.0.6-1) ... build 14-Oct-2019 14:05:21 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 14-Oct-2019 14:05:24 Setting up libwebpmux1:amd64 (0.4.4-1) ... build 14-Oct-2019 14:05:24 Setting up python-pil:amd64 (3.1.2-0ubuntu1.1) ... build 14-Oct-2019 14:05:26 Setting up python-imaging (3.1.2-0ubuntu1.1) ... build 14-Oct-2019 14:05:28 Setting up python-pip-whl (8.1.1-2ubuntu0.4) ... build 14-Oct-2019 14:05:29 Setting up python-pip (8.1.1-2ubuntu0.4) ... build 14-Oct-2019 14:05:30 Setting up python-pkg-resources (20.7.0-1) ... build 14-Oct-2019 14:05:32 Setting up python-setuptools (20.7.0-1) ... build 14-Oct-2019 14:05:34 Setting up python-wheel (0.29.0-1) ... build 14-Oct-2019 14:05:35 Setting up rename (0.20-4) ... build 14-Oct-2019 14:05:36 update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode build 14-Oct-2019 14:05:36 Setting up proj-bin (4.9.2-2) ... build 14-Oct-2019 14:05:37 Setting up python-scipy (0.17.0-1) ... build 14-Oct-2019 14:05:40 Setting up python3 (3.5.1-3) ... build 14-Oct-2019 14:05:40 running python rtupdate hooks for python3.5... build 14-Oct-2019 14:05:40 running python post-rtupdate hooks for python3.5... build 14-Oct-2019 14:05:41 Setting up lsb-release (9.20160110ubuntu0.2) ... build 14-Oct-2019 14:05:41 Setting up python3-apt (1.1.0~beta1ubuntu0.16.04.5) ... build 14-Oct-2019 14:05:42 Setting up python3-dbus (1.2.0-3) ... build 14-Oct-2019 14:05:43 Setting up python3-gi (3.20.0-0ubuntu1) ... build 14-Oct-2019 14:05:44 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 14-Oct-2019 14:05:45 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:05:45 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:05:46 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:05:48 Setting up python3-pycurl (7.43.0-1ubuntu1) ... build 14-Oct-2019 14:05:48 Setting up python3-software-properties (0.96.20.9) ... build 14-Oct-2019 14:05:49 Setting up software-properties-common (0.96.20.9) ... build 14-Oct-2019 14:05:50 Setting up unattended-upgrades (1.1ubuntu1.18.04.7~16.04.3) ... build 14-Oct-2019 14:05:52 debconf: unable to initialize frontend: Dialog build 14-Oct-2019 14:05:52 debconf: (TERM is not set, so the dialog frontend is not usable.) build 14-Oct-2019 14:05:52 debconf: falling back to frontend: Readline build 14-Oct-2019 14:05:52 build 14-Oct-2019 14:05:52 Creating config file /etc/apt/apt.conf.d/20auto-upgrades with new version build 14-Oct-2019 14:05:52 build 14-Oct-2019 14:05:52 Creating config file /etc/apt/apt.conf.d/50unattended-upgrades with new version build 14-Oct-2019 14:05:53 Setting up dh-python (2.20151103ubuntu1.2) ... build 14-Oct-2019 14:05:54 Setting up odbcinst (2.3.1-4.1) ... build 14-Oct-2019 14:05:55 Processing triggers for systemd (229-4ubuntu21.22) ... build 14-Oct-2019 14:05:55 Processing triggers for libc-bin (2.23-0ubuntu11) ... build 14-Oct-2019 14:05:56 Processing triggers for ca-certificates (20170717~16.04.2) ... build 14-Oct-2019 14:05:56 Updating certificates in /etc/ssl/certs... build 14-Oct-2019 14:05:58 148 added, 0 removed; done. build 14-Oct-2019 14:05:58 Running hooks in /etc/ca-certificates/update.d... build 14-Oct-2019 14:05:58 done. build 14-Oct-2019 14:05:58 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 14-Oct-2019 14:05:58 Processing triggers for dbus (1.10.6-1ubuntu3.4) ... build 14-Oct-2019 14:06:00 Official stable UbuntuGIS packages. build 14-Oct-2019 14:06:00 build 14-Oct-2019 14:06:00 build 14-Oct-2019 14:06:00 More info: https://launchpad.net/~ubuntugis/+archive/ubuntu/ppa build 14-Oct-2019 14:06:01 gpg: keyring `/tmp/tmpqzfofu9u/secring.gpg' created build 14-Oct-2019 14:06:01 gpg: keyring `/tmp/tmpqzfofu9u/pubring.gpg' created build 14-Oct-2019 14:06:01 gpg: requesting key 314DF160 from hkp server keyserver.ubuntu.com build 14-Oct-2019 14:06:01 gpg: /tmp/tmpqzfofu9u/trustdb.gpg: trustdb created build 14-Oct-2019 14:06:01 gpg: key 314DF160: public key "Launchpad ubuntugis-stable" imported build 14-Oct-2019 14:06:01 gpg: Total number processed: 1 build 14-Oct-2019 14:06:01 gpg: imported: 1 (RSA: 1) build 14-Oct-2019 14:06:01 OK build 14-Oct-2019 14:06:01 DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support build 14-Oct-2019 14:06:02 Collecting pip==9.0.3 build 14-Oct-2019 14:06:02 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 14-Oct-2019 14:06:02 Installing collected packages: pip build 14-Oct-2019 14:06:02 Found existing installation: pip 19.3 build 14-Oct-2019 14:06:02 Uninstalling pip-19.3: build 14-Oct-2019 14:06:03 Successfully uninstalled pip-19.3 build 14-Oct-2019 14:06:03 Successfully installed pip-9.0.3 build 14-Oct-2019 14:06:04 Collecting cython>=0.23.4 (from -r /home/clowder/requirements.txt (line 1)) build 14-Oct-2019 14:06:04 Downloading https://files.pythonhosted.org/packages/91/00/f5891fa0e95b14bb7f5698fc4da3139318d3e36b12a49c7598936afd4f08/Cython-0.29.13-cp27-cp27mu-manylinux1_x86_64.whl (2.0MB) build 14-Oct-2019 14:06:05 Requirement already satisfied: numpy>=1.10.4 in /usr/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 2)) build 14-Oct-2019 14:06:05 Collecting shapely>=1.3.2 (from -r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:06:05 Downloading https://files.pythonhosted.org/packages/81/d1/b8e1b089a8ddd6df74be583d70373eac55c725c6197c115efbd3c3e1509f/Shapely-1.6.4.post2-cp27-cp27mu-manylinux1_x86_64.whl (1.4MB) build 14-Oct-2019 14:06:05 Collecting pygeoprocessing==0.2.2 (from -r /home/clowder/requirements.txt (line 4)) build 14-Oct-2019 14:06:05 Downloading https://files.pythonhosted.org/packages/5a/00/23b0d22a568308d8626b493f8da4780ac29c29d62a065f8795803f64148f/pygeoprocessing-0.2.2.zip (532kB) build 14-Oct-2019 14:06:06 Requirement already satisfied: pika>=0.10.0 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 5)) build 14-Oct-2019 14:06:06 Requirement already satisfied: requests>=2.9.1 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 6)) build 14-Oct-2019 14:06:06 Requirement already satisfied: scipy in /usr/lib/python2.7/dist-packages (from pygeoprocessing==0.2.2->-r /home/clowder/requirements.txt (line 4)) build 14-Oct-2019 14:06:06 Requirement already satisfied: gdal in /usr/lib/python2.7/dist-packages (from pygeoprocessing==0.2.2->-r /home/clowder/requirements.txt (line 4)) build 14-Oct-2019 14:06:06 Requirement already satisfied: certifi>=2017.4.17 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 14-Oct-2019 14:06:06 Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 14-Oct-2019 14:06:06 Requirement already satisfied: idna<2.9,>=2.5 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 14-Oct-2019 14:06:06 Requirement already satisfied: urllib3<1.25,>=1.21.1 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 14-Oct-2019 14:06:06 Building wheels for collected packages: pygeoprocessing build 14-Oct-2019 14:06:06 Running setup.py bdist_wheel for pygeoprocessing: started build 14-Oct-2019 14:06:13  Failed building wheel for pygeoprocessing build 14-Oct-2019 14:06:13  Running setup.py bdist_wheel for pygeoprocessing: finished with status 'error' build 14-Oct-2019 14:06:13 Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-wW647g/pygeoprocessing/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/tmp90NyqFpip-wheel- --python-tag cp27: build 14-Oct-2019 14:06:13 running bdist_wheel build 14-Oct-2019 14:06:13 running build build 14-Oct-2019 14:06:13 running build_py build 14-Oct-2019 14:06:13 creating build build 14-Oct-2019 14:06:13 creating build/lib.linux-x86_64-2.7 build 14-Oct-2019 14:06:13 creating build/lib.linux-x86_64-2.7/pygeoprocessing build 14-Oct-2019 14:06:13 copying pygeoprocessing/fileio.py -> build/lib.linux-x86_64-2.7/pygeoprocessing build 14-Oct-2019 14:06:13 copying pygeoprocessing/__init__.py -> build/lib.linux-x86_64-2.7/pygeoprocessing build 14-Oct-2019 14:06:13 copying pygeoprocessing/geoprocessing.py -> build/lib.linux-x86_64-2.7/pygeoprocessing build 14-Oct-2019 14:06:13 creating build/lib.linux-x86_64-2.7/pygeoprocessing/routing build 14-Oct-2019 14:06:13 copying pygeoprocessing/routing/__init__.py -> build/lib.linux-x86_64-2.7/pygeoprocessing/routing build 14-Oct-2019 14:06:13 copying pygeoprocessing/routing/routing.py -> build/lib.linux-x86_64-2.7/pygeoprocessing/routing build 14-Oct-2019 14:06:13 creating build/lib.linux-x86_64-2.7/pygeoprocessing/tests build 14-Oct-2019 14:06:13 copying pygeoprocessing/tests/test_suite.py -> build/lib.linux-x86_64-2.7/pygeoprocessing/tests build 14-Oct-2019 14:06:13 copying pygeoprocessing/tests/__init__.py -> build/lib.linux-x86_64-2.7/pygeoprocessing/tests build 14-Oct-2019 14:06:13 creating build/lib.linux-x86_64-2.7/pygeoprocessing/dbfpy build 14-Oct-2019 14:06:13 copying pygeoprocessing/dbfpy/dbf.py -> build/lib.linux-x86_64-2.7/pygeoprocessing/dbfpy build 14-Oct-2019 14:06:13 copying pygeoprocessing/dbfpy/record.py -> build/lib.linux-x86_64-2.7/pygeoprocessing/dbfpy build 14-Oct-2019 14:06:13 copying pygeoprocessing/dbfpy/utils.py -> build/lib.linux-x86_64-2.7/pygeoprocessing/dbfpy build 14-Oct-2019 14:06:13 copying pygeoprocessing/dbfpy/__init__.py -> build/lib.linux-x86_64-2.7/pygeoprocessing/dbfpy build 14-Oct-2019 14:06:13 copying pygeoprocessing/dbfpy/fields.py -> build/lib.linux-x86_64-2.7/pygeoprocessing/dbfpy build 14-Oct-2019 14:06:13 copying pygeoprocessing/dbfpy/header.py -> build/lib.linux-x86_64-2.7/pygeoprocessing/dbfpy build 14-Oct-2019 14:06:13 copying pygeoprocessing/dbfpy/dbfnew.py -> build/lib.linux-x86_64-2.7/pygeoprocessing/dbfpy build 14-Oct-2019 14:06:13 running egg_info build 14-Oct-2019 14:06:13 writing requirements to pygeoprocessing.egg-info/requires.txt build 14-Oct-2019 14:06:13 writing pygeoprocessing.egg-info/PKG-INFO build 14-Oct-2019 14:06:13 writing top-level names to pygeoprocessing.egg-info/top_level.txt build 14-Oct-2019 14:06:13 writing dependency_links to pygeoprocessing.egg-info/dependency_links.txt build 14-Oct-2019 14:06:13 reading manifest file 'pygeoprocessing.egg-info/SOURCES.txt' build 14-Oct-2019 14:06:13 reading manifest template 'MANIFEST.in' build 14-Oct-2019 14:06:13 writing manifest file 'pygeoprocessing.egg-info/SOURCES.txt' build 14-Oct-2019 14:06:13 copying pygeoprocessing/geoprocessing_core.cpp -> build/lib.linux-x86_64-2.7/pygeoprocessing build 14-Oct-2019 14:06:13 copying pygeoprocessing/geoprocessing_core.pyx -> build/lib.linux-x86_64-2.7/pygeoprocessing build 14-Oct-2019 14:06:13 copying pygeoprocessing/routing/routing_core.cpp -> build/lib.linux-x86_64-2.7/pygeoprocessing/routing build 14-Oct-2019 14:06:13 copying pygeoprocessing/routing/routing_core.pxd -> build/lib.linux-x86_64-2.7/pygeoprocessing/routing build 14-Oct-2019 14:06:13 copying pygeoprocessing/routing/routing_core.pyx -> build/lib.linux-x86_64-2.7/pygeoprocessing/routing build 14-Oct-2019 14:06:13 running build_ext build 14-Oct-2019 14:06:13 building 'pygeoprocessing.geoprocessing_core' extension build 14-Oct-2019 14:06:13 creating build/temp.linux-x86_64-2.7 build 14-Oct-2019 14:06:13 creating build/temp.linux-x86_64-2.7/pygeoprocessing build 14-Oct-2019 14:06:13 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c pygeoprocessing/geoprocessing_core.cpp -o build/temp.linux-x86_64-2.7/pygeoprocessing/geoprocessing_core.o build 14-Oct-2019 14:06:13 cc1plus: warning: command line option '-Wstrict-prototypes' is valid for C/ObjC but not for C++ build 14-Oct-2019 14:06:13 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1777:0, build 14-Oct-2019 14:06:13 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18, build 14-Oct-2019 14:06:13 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, build 14-Oct-2019 14:06:13 from pygeoprocessing/geoprocessing_core.cpp:250: build 14-Oct-2019 14:06:13 /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] build 14-Oct-2019 14:06:13 #warning "Using deprecated NumPy API, disable it by " \ build 14-Oct-2019 14:06:13 ^ build 14-Oct-2019 14:06:13 In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:27:0, build 14-Oct-2019 14:06:13 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, build 14-Oct-2019 14:06:13 from pygeoprocessing/geoprocessing_core.cpp:250: build 14-Oct-2019 14:06:13 /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1448:1: warning: 'int _import_array()' defined but not used [-Wunused-function] build 14-Oct-2019 14:06:13 _import_array(void) build 14-Oct-2019 14:06:13 ^ build 14-Oct-2019 14:06:13 c++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wdate-time -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/pygeoprocessing/geoprocessing_core.o -o build/lib.linux-x86_64-2.7/pygeoprocessing/geoprocessing_core.so build 14-Oct-2019 14:06:13 building 'pygeoprocessing.routing.routing_core' extension build 14-Oct-2019 14:06:13 error: unknown file type '.pxd' (from 'pygeoprocessing/routing/routing_core.pxd') build 14-Oct-2019 14:06:13 build 14-Oct-2019 14:06:13 ---------------------------------------- build 14-Oct-2019 14:06:13 Running setup.py clean for pygeoprocessing build 14-Oct-2019 14:06:13 Failed to build pygeoprocessing build 14-Oct-2019 14:06:13 Installing collected packages: cython, shapely, pygeoprocessing build 14-Oct-2019 14:06:14 Running setup.py install for pygeoprocessing: started build 14-Oct-2019 14:06:37 Running setup.py install for pygeoprocessing: finished with status 'done' build 14-Oct-2019 14:06:37 Successfully installed cython-0.29.13 pygeoprocessing-0.2.2 shapely-1.6.4.post2 build 14-Oct-2019 14:06:37 You are using pip version 9.0.3, however version 19.3 is available. build 14-Oct-2019 14:06:37 You should consider upgrading via the 'pip install --upgrade pip' command. build 14-Oct-2019 14:06:47 Removing intermediate container 1be65d32c924 build 14-Oct-2019 14:06:47 ---> 4b7e0c354be9 build 14-Oct-2019 14:06:47 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 14-Oct-2019 14:06:48 ---> Running in e6229e51e086 build 14-Oct-2019 14:06:49 Removing intermediate container e6229e51e086 build 14-Oct-2019 14:06:49 ---> 71c53feb2c4b build 14-Oct-2019 14:06:49 Step 6/8 : CMD ["extractor"] build 14-Oct-2019 14:06:49 ---> Running in c52e521a6311 build 14-Oct-2019 14:06:50 Removing intermediate container c52e521a6311 build 14-Oct-2019 14:06:50 ---> 8287678b737a build 14-Oct-2019 14:06:50 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geotiff.metadata" MAIN_SCRIPT="ncsa.image.geotiff.py" build 14-Oct-2019 14:06:51 ---> Running in 5119b53403fe build 14-Oct-2019 14:06:52 Removing intermediate container 5119b53403fe build 14-Oct-2019 14:06:52 ---> a793b7452068 build 14-Oct-2019 14:06:52 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json /home/clowder/ build 14-Oct-2019 14:06:53 ---> cfe6131c0c8f build 14-Oct-2019 14:06:53 Successfully built cfe6131c0c8f build 14-Oct-2019 14:06:53 Successfully tagged 21384:latest build 14-Oct-2019 14:06:53 The push refers to repository [docker.io/clowder/extractors-geotiff-metadata] build 14-Oct-2019 14:06:54 a3905362d089: Preparing build 14-Oct-2019 14:06:54 2252ae832803: Preparing build 14-Oct-2019 14:06:54 ebb8c96852ad: Preparing build 14-Oct-2019 14:06:54 d8136157e163: Preparing build 14-Oct-2019 14:06:54 c808cf8c9ef8: Preparing build 14-Oct-2019 14:06:54 5f25474732fa: Preparing build 14-Oct-2019 14:06:54 03d26a86cc3e: Preparing build 14-Oct-2019 14:06:54 f1c0e1d76ba7: Preparing build 14-Oct-2019 14:06:54 b8c5d7f817e8: Preparing build 14-Oct-2019 14:06:54 9acfe225486b: Preparing build 14-Oct-2019 14:06:54 90109bbe5b76: Preparing build 14-Oct-2019 14:06:54 cb81b9d8a6c9: Preparing build 14-Oct-2019 14:06:54 ea69392465ad: Preparing build 14-Oct-2019 14:06:54 5f25474732fa: Waiting build 14-Oct-2019 14:06:54 f1c0e1d76ba7: Waiting build 14-Oct-2019 14:06:54 b8c5d7f817e8: Waiting build 14-Oct-2019 14:06:54 9acfe225486b: Waiting build 14-Oct-2019 14:06:54 03d26a86cc3e: Waiting build 14-Oct-2019 14:06:54 90109bbe5b76: Waiting build 14-Oct-2019 14:06:54 cb81b9d8a6c9: Waiting build 14-Oct-2019 14:06:55 d8136157e163: Mounted from clowder/extractors-siegfried build 14-Oct-2019 14:06:55 c808cf8c9ef8: Mounted from clowder/extractors-siegfried build 14-Oct-2019 14:06:56 5f25474732fa: Mounted from clowder/extractors-siegfried build 14-Oct-2019 14:06:56 ebb8c96852ad: Pushed build 14-Oct-2019 14:06:56 03d26a86cc3e: Mounted from clowder/extractors-siegfried build 14-Oct-2019 14:06:57 9acfe225486b: Layer already exists build 14-Oct-2019 14:06:57 f1c0e1d76ba7: Mounted from clowder/extractors-siegfried build 14-Oct-2019 14:06:57 90109bbe5b76: Layer already exists build 14-Oct-2019 14:06:57 b8c5d7f817e8: Mounted from clowder/extractors-siegfried build 14-Oct-2019 14:06:57 cb81b9d8a6c9: Layer already exists build 14-Oct-2019 14:06:57 ea69392465ad: Layer already exists build 14-Oct-2019 14:06:58 a3905362d089: Pushed build 14-Oct-2019 14:07:30 2252ae832803: Pushed build 14-Oct-2019 14:07:32 latest: digest: sha256:04648e00612c579c09a926746481b080a919ecde1eb4493dd0cc3ac1b05b5753 size: 3032 build 14-Oct-2019 14:07:32 Untagged: clowder/extractors-geotiff-metadata:latest build 14-Oct-2019 14:07:32 Untagged: clowder/extractors-geotiff-metadata@sha256:04648e00612c579c09a926746481b080a919ecde1eb4493dd0cc3ac1b05b5753 build 14-Oct-2019 14:07:33 Untagged: 21384:latest build 14-Oct-2019 14:07:33 Deleted: sha256:cfe6131c0c8f6eda836fd2ea38995c1e44aefc3c78391bee1bcc565e579c66b6 build 14-Oct-2019 14:07:33 Deleted: sha256:e267012af9376e368f9abfc7c7e7d5c113827bc900aaf882624f348033b7213d build 14-Oct-2019 14:07:33 Deleted: sha256:a793b7452068d2345ffda07287ea49f9b826693a4a22158c65bb415c629933b8 build 14-Oct-2019 14:07:33 Deleted: sha256:8287678b737a0ae757733cd340febae30ef0b3e99444f8bea09b5195e83cf3cd build 14-Oct-2019 14:07:33 Deleted: sha256:71c53feb2c4bdf01bfa577f1bd95ec297725d2c60fec2d21f25fc47c1ee377fc build 14-Oct-2019 14:07:33 Deleted: sha256:4b7e0c354be9dde61554a2f19be51efc34cba50d6c82f0a7b016ddfa7d06601c build 14-Oct-2019 14:07:33 Deleted: sha256:94601db84c0cfb8f7e8fad270d2fbe8268762a5156a8c806f7a4577dc8a7a760 build 14-Oct-2019 14:07:33 Deleted: sha256:4bc0c7555603e2c58b9583519082240c9f76edd895540520338fb25116c3703b build 14-Oct-2019 14:07:33 Deleted: sha256:4121437724c20390893c1f67e0f0d2c504a9ff4629f4c829e9bd4a6dc361d2a5 build 14-Oct-2019 14:07:33 Deleted: sha256:9e01fcc8b5156edd30b5ff677f30ebe8c00d8ae4be84608d8756f100f5d3e1bc build 14-Oct-2019 14:07:33 Sending build context to Docker daemon 1.353MB build 14-Oct-2019 14:07:33 build 14-Oct-2019 14:07:33 Step 1/8 : FROM clowder/pyclowder:2 build 14-Oct-2019 14:07:33 ---> a3ddbd70e26e build 14-Oct-2019 14:07:33 Step 2/8 : MAINTAINER Yong Wook Kim build 14-Oct-2019 14:07:34 ---> Running in 8a6f34f2449c build 14-Oct-2019 14:07:35 Removing intermediate container 8a6f34f2449c build 14-Oct-2019 14:07:35 ---> 7d2e2d12ba78 build 14-Oct-2019 14:07:35 Step 3/8 : COPY requirements.txt /home/clowder/ build 14-Oct-2019 14:07:36 ---> cb92726ae12d build 14-Oct-2019 14:07:36 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full && pip install --upgrade pip==9.0.3 && pip install --upgrade -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 14-Oct-2019 14:07:36 ---> Running in 0741599309ee build 14-Oct-2019 14:07:38 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [109 kB] build 14-Oct-2019 14:07:38 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 14-Oct-2019 14:07:39 Get:3 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [971 kB] build 14-Oct-2019 14:07:39 Get:4 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 14-Oct-2019 14:07:40 Get:5 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 14-Oct-2019 14:07:40 Get:6 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 14-Oct-2019 14:07:40 Get:7 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [587 kB] build 14-Oct-2019 14:07:40 Get:8 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 14-Oct-2019 14:07:41 Get:9 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [6276 B] build 14-Oct-2019 14:07:41 Get:10 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 14-Oct-2019 14:07:41 Get:11 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 14-Oct-2019 14:07:42 Get:12 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 14-Oct-2019 14:07:43 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1348 kB] build 14-Oct-2019 14:07:44 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 14-Oct-2019 14:07:44 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [991 kB] build 14-Oct-2019 14:07:45 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [19.2 kB] build 14-Oct-2019 14:07:45 Get:17 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7942 B] build 14-Oct-2019 14:07:45 Get:18 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8807 B] build 14-Oct-2019 14:07:45 Fetched 16.1 MB in 7s (2237 kB/s) build 14-Oct-2019 14:07:46 Reading package lists... build 14-Oct-2019 14:07:47 Reading package lists... build 14-Oct-2019 14:07:47 Building dependency tree... build 14-Oct-2019 14:07:47 Reading state information... build 14-Oct-2019 14:07:47 The following additional packages will be installed: build 14-Oct-2019 14:07:47 fontconfig-config fonts-dejavu-core libaec0 libarmadillo6 libarpack2 build 14-Oct-2019 14:07:47 libblas-common libblas3 libdap17v5 libdapclient6v5 libepsilon1 build 14-Oct-2019 14:07:47 libfontconfig1 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 build 14-Oct-2019 14:07:47 libgfortran3 libgif7 libhdf4-0-alt libhdf5-10 libicu55 libjasper1 libjbig0 build 14-Oct-2019 14:07:47 libjpeg-turbo8 libjpeg8 libkmlbase1 libkmldom1 libkmlengine1 liblapack3 build 14-Oct-2019 14:07:47 liblcms2-2 libltdl7 libmagic1 libminizip1 libmysqlclient20 libnetcdf11 build 14-Oct-2019 14:07:47 libodbc1 libogdi3.2 libopenjp2-7 libpng12-0 libpoppler58 libpq5 libproj9 build 14-Oct-2019 14:07:47 libpython-stdlib libquadmath0 libspatialite7 libsuperlu4 libsz2 libtiff5 build 14-Oct-2019 14:07:47 liburiparser1 libwebp5 libxerces-c3.1 libxml2 mysql-common odbcinst build 14-Oct-2019 14:07:47 odbcinst1debian2 proj-bin proj-data python python-minimal python-numpy build 14-Oct-2019 14:07:47 sgml-base ucf xml-core build 14-Oct-2019 14:07:47 Suggested packages: build 14-Oct-2019 14:07:47 libhdf4-doc libhdf4-alt-dev hdf4-tools libnetcdf4 libjasper-runtime build 14-Oct-2019 14:07:47 liblcms2-utils libmyodbc odbc-postgresql tdsodbc unixodbc-bin ogdi-bin build 14-Oct-2019 14:07:47 poppler-data p7zip-rar python-doc python-tk gcc gfortran python-dev build 14-Oct-2019 14:07:47 python-nose python-numpy-dbg python-numpy-doc sgml-base-doc debhelper build 14-Oct-2019 14:07:47 The following NEW packages will be installed: build 14-Oct-2019 14:07:47 file fontconfig-config fonts-dejavu-core gdal-bin libaec0 libarmadillo6 build 14-Oct-2019 14:07:47 libarpack2 libblas-common libblas3 libdap17v5 libdapclient6v5 libepsilon1 build 14-Oct-2019 14:07:47 libfontconfig1 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 build 14-Oct-2019 14:07:47 libgfortran3 libgif7 libhdf4-0-alt libhdf5-10 libicu55 libjasper1 libjbig0 build 14-Oct-2019 14:07:47 libjpeg-turbo8 libjpeg8 libkmlbase1 libkmldom1 libkmlengine1 liblapack3 build 14-Oct-2019 14:07:47 liblcms2-2 libltdl7 libmagic1 libminizip1 libmysqlclient20 libnetcdf11 build 14-Oct-2019 14:07:47 libodbc1 libogdi3.2 libopenjp2-7 libpng12-0 libpoppler58 libpq5 libproj9 build 14-Oct-2019 14:07:47 libpython-stdlib libquadmath0 libspatialite7 libsuperlu4 libsz2 libtiff5 build 14-Oct-2019 14:07:47 liburiparser1 libwebp5 libxerces-c3.1 libxml2 mysql-common odbcinst build 14-Oct-2019 14:07:47 odbcinst1debian2 p7zip-full proj-bin proj-data python python-gdal build 14-Oct-2019 14:07:47 python-minimal python-numpy sgml-base ucf xml-core build 14-Oct-2019 14:07:48 0 upgraded, 67 newly installed, 0 to remove and 5 not upgraded. build 14-Oct-2019 14:07:48 Need to get 32.9 MB of archives. build 14-Oct-2019 14:07:48 After this operation, 134 MB of additional disk space will be used. build 14-Oct-2019 14:07:48 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 14-Oct-2019 14:07:48 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 14-Oct-2019 14:07:49 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 14-Oct-2019 14:07:49 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 14-Oct-2019 14:07:49 Get:5 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 14-Oct-2019 14:07:50 Get:6 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-minimal amd64 2.7.12-1~16.04 [28.1 kB] build 14-Oct-2019 14:07:50 Get:7 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython-stdlib amd64 2.7.12-1~16.04 [7768 B] build 14-Oct-2019 14:07:50 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python amd64 2.7.12-1~16.04 [137 kB] build 14-Oct-2019 14:07:51 Get:9 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 14-Oct-2019 14:07:51 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.2 [216 kB] build 14-Oct-2019 14:07:52 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.2 [21.2 kB] build 14-Oct-2019 14:07:52 Get:12 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 14-Oct-2019 14:07:52 Get:13 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 14-Oct-2019 14:07:53 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 14-Oct-2019 14:07:54 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 14-Oct-2019 14:07:55 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(4.3+dfsg-3) ... build 14-Oct-2019 14:10:24 Setting up libpython-stdlib:amd64 (2.7.12-1~16.04) ... build 14-Oct-2019 14:10:25 Setting up python (2.7.12-1~16.04) ... build 14-Oct-2019 14:10:26 Setting up libjbig0:amd64 (2.1-3.1) ... build 14-Oct-2019 14:10:27 Setting up libmagic1:amd64 (1:5.25-2ubuntu1.2) ... build 14-Oct-2019 14:10:28 Setting up file (1:5.25-2ubuntu1.2) ... build 14-Oct-2019 14:10:28 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ... build 14-Oct-2019 14:10:29 Setting up ucf (3.0036) ... build 14-Oct-2019 14:10:30 debconf: unable to initialize frontend: Dialog build 14-Oct-2019 14:10:30 debconf: (TERM is not set, so the dialog frontend is not usable.) build 14-Oct-2019 14:10:30 debconf: falling back to frontend: Readline build 14-Oct-2019 14:10:30 debconf: unable to initialize frontend: Readline build 14-Oct-2019 14:10:30 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) build 14-Oct-2019 14:10:30 debconf: falling back to frontend: Teletype build 14-Oct-2019 14:10:30 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 14-Oct-2019 14:10:31 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ... build 14-Oct-2019 14:10:32 Setting up xml-core (0.13+nmu2) ... build 14-Oct-2019 14:10:33 Setting up fonts-dejavu-core (2.35-1) ... build 14-Oct-2019 14:10:36 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 14-Oct-2019 14:10:45 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.11) ... build 14-Oct-2019 14:10:45 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.11) ... build 14-Oct-2019 14:10:46 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 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(0.3.2-1) ... build 14-Oct-2019 14:10:54 Setting up libsz2:amd64 (0.3.2-1) ... build 14-Oct-2019 14:10:55 Setting up libhdf5-10:amd64 (1.8.16+docs-4ubuntu1.1) ... build 14-Oct-2019 14:10:56 Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.2) ... build 14-Oct-2019 14:10:56 Setting up libminizip1:amd64 (1.1-8) ... build 14-Oct-2019 14:10:57 Setting up liburiparser1:amd64 (0.8.4-1) ... build 14-Oct-2019 14:10:57 Setting up libkmlbase1:amd64 (1.3.0-1) ... build 14-Oct-2019 14:10:58 Setting up libkmldom1:amd64 (1.3.0-1) ... build 14-Oct-2019 14:10:59 Setting up libkmlengine1:amd64 (1.3.0-1) ... build 14-Oct-2019 14:10:59 Setting up mysql-common (5.7.27-0ubuntu0.16.04.1) ... build 14-Oct-2019 14:11:00 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 14-Oct-2019 14:11:00 Setting up libmysqlclient20:amd64 (5.7.27-0ubuntu0.16.04.1) ... build 14-Oct-2019 14:11:01 Setting up libnetcdf11 (1:4.4.0-2) ... build 14-Oct-2019 14:11:02 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 14-Oct-2019 14:11:02 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 14-Oct-2019 14:11:03 Setting up proj-data (4.9.2-2) ... build 14-Oct-2019 14:11:04 Setting up libproj9 (4.9.2-2) ... build 14-Oct-2019 14:11:04 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 14-Oct-2019 14:11:05 Setting up libopenjp2-7:amd64 (2.1.2-1.1+deb9u3build0.16.04.1) ... build 14-Oct-2019 14:11:06 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.4) ... build 14-Oct-2019 14:11:07 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 14-Oct-2019 14:11:07 Setting up liblcms2-2:amd64 (2.6-3ubuntu2.1) ... build 14-Oct-2019 14:11:08 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.6) ... build 14-Oct-2019 14:11:09 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.14) ... build 14-Oct-2019 14:11:09 Setting up libpq5:amd64 (9.5.19-0ubuntu0.16.04.1) ... build 14-Oct-2019 14:11:10 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 14-Oct-2019 14:11:11 Setting up libwebp5:amd64 (0.4.4-1) ... build 14-Oct-2019 14:11:11 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 14-Oct-2019 14:11:12 Setting up p7zip-full (9.20.1~dfsg.1-4.2ubuntu0.1) ... build 14-Oct-2019 14:11:13 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 14-Oct-2019 14:11:15 Setting up proj-bin (4.9.2-2) ... build 14-Oct-2019 14:11:16 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 14-Oct-2019 14:11:16 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:11:17 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:11:18 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:11:20 Setting up odbcinst (2.3.1-4.1) ... build 14-Oct-2019 14:11:21 Processing triggers for libc-bin (2.23-0ubuntu11) ... build 14-Oct-2019 14:11:21 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 14-Oct-2019 14:11:22 DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support build 14-Oct-2019 14:11:23 Collecting pip==9.0.3 build 14-Oct-2019 14:11:23 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 14-Oct-2019 14:11:23 Installing collected packages: pip build 14-Oct-2019 14:11:23 Found existing installation: pip 19.3 build 14-Oct-2019 14:11:23 Uninstalling pip-19.3: build 14-Oct-2019 14:11:24 Successfully uninstalled pip-19.3 build 14-Oct-2019 14:11:24 Successfully installed pip-9.0.3 build 14-Oct-2019 14:11:25 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 14-Oct-2019 14:11:25 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 14-Oct-2019 14:11:25 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:11:25 Collecting pika>=1.0.0 (from -r /home/clowder/requirements.txt (line 2)) build 14-Oct-2019 14:11:25 Downloading https://files.pythonhosted.org/packages/a1/ae/8bedf0e9f1c0c5d046db3a7428a4227fe36ec1b8e25607f3c38ac9bf513c/pika-1.1.0-py2.py3-none-any.whl (148kB) build 14-Oct-2019 14:11:25 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:11:25 Collecting requests>=2.10.0 (from -r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:11:25 Downloading https://files.pythonhosted.org/packages/51/bd/23c926cd341ea6b7dd0b2a00aba99ae0f828be89d72b2190f27c11d4b7fb/requests-2.22.0-py2.py3-none-any.whl (57kB) build 14-Oct-2019 14:11:25 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:11:25 Requirement already up-to-date: wheel>=0.24.0 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 4)) build 14-Oct-2019 14:11:25 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 14-Oct-2019 14:11:26 Downloading https://files.pythonhosted.org/packages/ce/2e/87461bfbb7e561203b759b3f7f639e2144226604372830d00a8279960ae1/httplib2-0.14.0.tar.gz (219kB) build 14-Oct-2019 14:11:26 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 14-Oct-2019 14:11:26 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 14-Oct-2019 14:11:26 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:11:26 Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:11:26 Downloading https://files.pythonhosted.org/packages/e0/da/55f51ea951e1b7c63a579c09dd7db825bb730ec1fe9c0180fc77bfb31448/urllib3-1.25.6-py2.py3-none-any.whl (125kB) build 14-Oct-2019 14:11:26 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:11:27 Requirement already up-to-date: certifi>=2017.4.17 in /usr/local/lib/python2.7/dist-packages (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:11:27 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:11:27 Requirement already up-to-date: chardet<3.1.0,>=3.0.2 in /usr/local/lib/python2.7/dist-packages (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:11:27 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:11:27 Requirement already up-to-date: idna<2.9,>=2.5 in /usr/local/lib/python2.7/dist-packages (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:11:27 Building wheels for collected packages: gsconfig, httplib2, gisdata build 14-Oct-2019 14:11:27 Running setup.py bdist_wheel for gsconfig: started build 14-Oct-2019 14:11:27 Running setup.py bdist_wheel for gsconfig: finished with status 'done' build 14-Oct-2019 14:11:27 Stored in directory: /root/.cache/pip/wheels/87/28/4d/d5bbfd0e2971455885ce43e19d1339fd271b3af8dee43f25aa build 14-Oct-2019 14:11:27 Running setup.py bdist_wheel for httplib2: started build 14-Oct-2019 14:11:27 Running setup.py bdist_wheel for httplib2: finished with status 'done' build 14-Oct-2019 14:11:27 Stored in directory: /root/.cache/pip/wheels/51/ab/65/f318b4271019823cf7d7c178ac76a8ea4d6e6271fe9f5ba488 build 14-Oct-2019 14:11:27 Running setup.py bdist_wheel for gisdata: started build 14-Oct-2019 14:11:28 Running setup.py bdist_wheel for gisdata: finished with status 'done' build 14-Oct-2019 14:11:28 Stored in directory: /root/.cache/pip/wheels/93/56/9e/9abf7bddfdf9ff72b71678a8bdfe35a3ab058e1b10722b361e build 14-Oct-2019 14:11:28 Successfully built gsconfig httplib2 gisdata build 14-Oct-2019 14:11:28 Installing collected packages: httplib2, gisdata, gsconfig, pika, urllib3, requests build 14-Oct-2019 14:11:28 Found existing installation: pika 1.0.0 build 14-Oct-2019 14:11:28 Uninstalling pika-1.0.0: build 14-Oct-2019 14:11:34 Successfully uninstalled pika-1.0.0 build 14-Oct-2019 14:11:34 Found existing installation: urllib3 1.24.3 build 14-Oct-2019 14:11:34 Uninstalling urllib3-1.24.3: build 14-Oct-2019 14:11:43 Successfully uninstalled urllib3-1.24.3 build 14-Oct-2019 14:11:43 Found existing installation: requests 2.21.0 build 14-Oct-2019 14:11:43 Uninstalling requests-2.21.0: build 14-Oct-2019 14:11:48 Successfully uninstalled requests-2.21.0 build 14-Oct-2019 14:11:48 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.14.0 pika-1.1.0 requests-2.22.0 urllib3-1.25.6 build 14-Oct-2019 14:11:48 You are using pip version 9.0.3, however version 19.3 is available. build 14-Oct-2019 14:11:48 You should consider upgrading via the 'pip install --upgrade pip' command. build 14-Oct-2019 14:11:52 Removing intermediate container 0741599309ee build 14-Oct-2019 14:11:52 ---> 40b10c33e5df build 14-Oct-2019 14:11:52 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 14-Oct-2019 14:11:53 ---> Running in 2d0bd52ef4af build 14-Oct-2019 14:11:54 Removing intermediate container 2d0bd52ef4af build 14-Oct-2019 14:11:54 ---> e6b2af4947af build 14-Oct-2019 14:11:54 Step 6/8 : CMD ["extractor"] build 14-Oct-2019 14:11:55 ---> Running in b3fca1c3df7f build 14-Oct-2019 14:11:56 Removing intermediate container b3fca1c3df7f build 14-Oct-2019 14:11:56 ---> fb08d2a49c1a build 14-Oct-2019 14:11:56 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geotiff.preview" MAIN_SCRIPT="ncsa.geo.tiff.py" GEOSERVER_URL="" GEOSERVER_USERNAME="admin" GEOSERVER_PASSWORD="geoserver" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 14-Oct-2019 14:11:56 ---> Running in 4f08cba0b4ba build 14-Oct-2019 14:11:57 Removing intermediate container 4f08cba0b4ba build 14-Oct-2019 14:11:57 ---> 3889bed6db75 build 14-Oct-2019 14:11:57 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json rasterTemplate.xml /home/clowder/ build 14-Oct-2019 14:11:59 ---> ff192cf8adca build 14-Oct-2019 14:11:59 Successfully built ff192cf8adca build 14-Oct-2019 14:11:59 Successfully tagged 21384:latest build 14-Oct-2019 14:11:59 The push refers to repository [docker.io/clowder/extractors-geotiff-preview] build 14-Oct-2019 14:11:59 b4c05bdf46d1: Preparing build 14-Oct-2019 14:11:59 739ad83ac531: Preparing build 14-Oct-2019 14:11:59 c03f326e00d1: Preparing build 14-Oct-2019 14:11:59 d8136157e163: Preparing build 14-Oct-2019 14:11:59 c808cf8c9ef8: Preparing build 14-Oct-2019 14:11:59 5f25474732fa: Preparing build 14-Oct-2019 14:11:59 03d26a86cc3e: Preparing build 14-Oct-2019 14:11:59 f1c0e1d76ba7: Preparing build 14-Oct-2019 14:11:59 b8c5d7f817e8: Preparing build 14-Oct-2019 14:11:59 9acfe225486b: Preparing build 14-Oct-2019 14:11:59 90109bbe5b76: Preparing build 14-Oct-2019 14:11:59 cb81b9d8a6c9: Preparing build 14-Oct-2019 14:11:59 ea69392465ad: Preparing build 14-Oct-2019 14:11:59 f1c0e1d76ba7: Waiting build 14-Oct-2019 14:11:59 90109bbe5b76: Waiting build 14-Oct-2019 14:11:59 b8c5d7f817e8: Waiting build 14-Oct-2019 14:11:59 cb81b9d8a6c9: Waiting build 14-Oct-2019 14:11:59 9acfe225486b: Waiting build 14-Oct-2019 14:11:59 ea69392465ad: Waiting build 14-Oct-2019 14:11:59 5f25474732fa: Waiting build 14-Oct-2019 14:11:59 03d26a86cc3e: Waiting build 14-Oct-2019 14:12:00 c808cf8c9ef8: Mounted from clowder/extractors-geotiff-metadata build 14-Oct-2019 14:12:00 d8136157e163: Mounted from clowder/extractors-geotiff-metadata build 14-Oct-2019 14:12:01 5f25474732fa: Mounted from clowder/extractors-geotiff-metadata build 14-Oct-2019 14:12:01 b4c05bdf46d1: Pushed build 14-Oct-2019 14:12:01 03d26a86cc3e: Mounted from clowder/extractors-geotiff-metadata build 14-Oct-2019 14:12:02 c03f326e00d1: Pushed build 14-Oct-2019 14:12:02 9acfe225486b: Layer already exists build 14-Oct-2019 14:12:02 90109bbe5b76: Layer already exists build 14-Oct-2019 14:12:03 f1c0e1d76ba7: Mounted from clowder/extractors-geotiff-metadata build 14-Oct-2019 14:12:03 ea69392465ad: Layer already exists build 14-Oct-2019 14:12:03 cb81b9d8a6c9: Layer already exists build 14-Oct-2019 14:12:03 b8c5d7f817e8: Mounted from clowder/extractors-geotiff-metadata build 14-Oct-2019 14:12:12 739ad83ac531: Pushed build 14-Oct-2019 14:12:14 latest: digest: sha256:dd034fab89cdf9b207c26e8ac1f20661cc0ed187dee082a04e641d8de4e986e3 size: 3031 build 14-Oct-2019 14:12:15 Untagged: clowder/extractors-geotiff-preview:latest build 14-Oct-2019 14:12:15 Untagged: clowder/extractors-geotiff-preview@sha256:dd034fab89cdf9b207c26e8ac1f20661cc0ed187dee082a04e641d8de4e986e3 build 14-Oct-2019 14:12:15 Untagged: 21384:latest build 14-Oct-2019 14:12:15 Deleted: sha256:ff192cf8adca49547a44202a745ece68ab315f84a58089e936a55185133ddd7a build 14-Oct-2019 14:12:15 Deleted: sha256:d73478ade024d122f65e34b642c538562c2071dce86130b1584b4e9a8b63b6bb build 14-Oct-2019 14:12:15 Deleted: sha256:3889bed6db7525ebb3e6c8e7c3019b7b49244d4e69a7cf942b8b4f2ab00caa40 build 14-Oct-2019 14:12:15 Deleted: sha256:fb08d2a49c1a7ced69f593020aa97e76c4ab6185165bf55658b1b2356db63351 build 14-Oct-2019 14:12:15 Deleted: sha256:e6b2af4947afa81a96dbe7e908c11248a61433f6dbc167e3e95f95bdae10249c build 14-Oct-2019 14:12:15 Deleted: sha256:40b10c33e5df0577f70642a48652203bdbdefcfc50a391cf8d0032d8ffda9aae build 14-Oct-2019 14:12:15 Deleted: sha256:ea4b1196bc76a89bb0103482fd22351914b7d9b81a3c0b6f76562898625b83bd build 14-Oct-2019 14:12:15 Deleted: sha256:cb92726ae12d5a86895652ba755636698ed5a18ae2b31017d9530013196e52a4 build 14-Oct-2019 14:12:15 Deleted: sha256:f898f510d2172679f3bfb6cf14a8d4342fdc8f0e2d70bd84c58e51878234cbe2 build 14-Oct-2019 14:12:15 Deleted: sha256:7d2e2d12ba78d4096909cdd7e709816bc03f814082e1aa8da9e5c4e26b746fd1 build 14-Oct-2019 14:12:15 Sending build context to Docker daemon 168.4kB build 14-Oct-2019 14:12:15 build 14-Oct-2019 14:12:15 Step 1/8 : FROM clowder/pyclowder:2 build 14-Oct-2019 14:12:15 ---> a3ddbd70e26e build 14-Oct-2019 14:12:15 Step 2/8 : MAINTAINER Yong Wook Kim build 14-Oct-2019 14:12:16 ---> Running in c1064e1c9e39 build 14-Oct-2019 14:12:17 Removing intermediate container c1064e1c9e39 build 14-Oct-2019 14:12:17 ---> 9700c6a53b1f build 14-Oct-2019 14:12:17 Step 3/8 : COPY requirements.txt /home/clowder/ build 14-Oct-2019 14:12:17 ---> 98cd3de7e594 build 14-Oct-2019 14:12:17 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full && pip install --upgrade pip==9.0.3 && pip install --upgrade -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 14-Oct-2019 14:12:18 ---> Running in 199df93b31e5 build 14-Oct-2019 14:12:20 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [109 kB] build 14-Oct-2019 14:12:20 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 14-Oct-2019 14:12:20 Get:3 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [971 kB] build 14-Oct-2019 14:12:20 Get:4 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 14-Oct-2019 14:12:20 Get:5 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [587 kB] build 14-Oct-2019 14:12:21 Get:6 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [6276 B] build 14-Oct-2019 14:12:21 Get:7 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 14-Oct-2019 14:12:21 Get:8 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 14-Oct-2019 14:12:22 Get:9 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 14-Oct-2019 14:12:23 Get:10 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 14-Oct-2019 14:12:23 Get:11 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 14-Oct-2019 14:12:24 Get:12 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 14-Oct-2019 14:12:25 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1348 kB] build 14-Oct-2019 14:12:25 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 14-Oct-2019 14:12:26 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [991 kB] build 14-Oct-2019 14:12:26 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [19.2 kB] build 14-Oct-2019 14:12:27 Get:17 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7942 B] build 14-Oct-2019 14:12:27 Get:18 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8807 B] build 14-Oct-2019 14:12:27 Fetched 16.1 MB in 7s (2238 kB/s) build 14-Oct-2019 14:12:28 Reading package lists... build 14-Oct-2019 14:12:29 Reading package lists... build 14-Oct-2019 14:12:29 Building dependency tree... build 14-Oct-2019 14:12:29 Reading state information... build 14-Oct-2019 14:12:29 The following additional packages will be installed: build 14-Oct-2019 14:12:29 fontconfig-config fonts-dejavu-core libaec0 libarmadillo6 libarpack2 build 14-Oct-2019 14:12:29 libblas-common libblas3 libdap17v5 libdapclient6v5 libepsilon1 build 14-Oct-2019 14:12:29 libfontconfig1 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 build 14-Oct-2019 14:12:29 libgfortran3 libgif7 libhdf4-0-alt libhdf5-10 libicu55 libjasper1 libjbig0 build 14-Oct-2019 14:12:29 libjpeg-turbo8 libjpeg8 libkmlbase1 libkmldom1 libkmlengine1 liblapack3 build 14-Oct-2019 14:12:29 liblcms2-2 libltdl7 libmagic1 libminizip1 libmysqlclient20 libnetcdf11 build 14-Oct-2019 14:12:29 libodbc1 libogdi3.2 libopenjp2-7 libpng12-0 libpoppler58 libpq5 libproj9 build 14-Oct-2019 14:12:29 libpython-stdlib libquadmath0 libspatialite7 libsuperlu4 libsz2 libtiff5 build 14-Oct-2019 14:12:29 liburiparser1 libwebp5 libxerces-c3.1 libxml2 mysql-common odbcinst build 14-Oct-2019 14:12:29 odbcinst1debian2 proj-bin proj-data python python-minimal python-numpy build 14-Oct-2019 14:12:29 sgml-base ucf xml-core build 14-Oct-2019 14:12:29 Suggested packages: build 14-Oct-2019 14:12:29 libhdf4-doc libhdf4-alt-dev hdf4-tools libnetcdf4 libjasper-runtime build 14-Oct-2019 14:12:29 liblcms2-utils libmyodbc odbc-postgresql tdsodbc unixodbc-bin ogdi-bin build 14-Oct-2019 14:12:29 poppler-data p7zip-rar python-doc python-tk gcc gfortran python-dev build 14-Oct-2019 14:12:29 python-nose python-numpy-dbg python-numpy-doc sgml-base-doc debhelper build 14-Oct-2019 14:12:29 The following NEW packages will be installed: build 14-Oct-2019 14:12:29 file fontconfig-config fonts-dejavu-core gdal-bin libaec0 libarmadillo6 build 14-Oct-2019 14:12:29 libarpack2 libblas-common libblas3 libdap17v5 libdapclient6v5 libepsilon1 build 14-Oct-2019 14:12:29 libfontconfig1 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 build 14-Oct-2019 14:12:29 libgfortran3 libgif7 libhdf4-0-alt libhdf5-10 libicu55 libjasper1 libjbig0 build 14-Oct-2019 14:12:29 libjpeg-turbo8 libjpeg8 libkmlbase1 libkmldom1 libkmlengine1 liblapack3 build 14-Oct-2019 14:12:29 liblcms2-2 libltdl7 libmagic1 libminizip1 libmysqlclient20 libnetcdf11 build 14-Oct-2019 14:12:29 libodbc1 libogdi3.2 libopenjp2-7 libpng12-0 libpoppler58 libpq5 libproj9 build 14-Oct-2019 14:12:29 libpython-stdlib libquadmath0 libspatialite7 libsuperlu4 libsz2 libtiff5 build 14-Oct-2019 14:12:29 liburiparser1 libwebp5 libxerces-c3.1 libxml2 mysql-common odbcinst build 14-Oct-2019 14:12:29 odbcinst1debian2 p7zip-full proj-bin proj-data python python-gdal build 14-Oct-2019 14:12:29 python-minimal python-numpy sgml-base ucf xml-core build 14-Oct-2019 14:12:30 0 upgraded, 67 newly installed, 0 to remove and 5 not upgraded. build 14-Oct-2019 14:12:30 Need to get 32.9 MB of archives. build 14-Oct-2019 14:12:30 After this operation, 134 MB of additional disk space will be used. build 14-Oct-2019 14:12:30 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 14-Oct-2019 14:12:30 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 14-Oct-2019 14:12:30 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 14-Oct-2019 14:12:30 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 14-Oct-2019 14:12:31 Get:5 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 14-Oct-2019 14:12:32 Get:6 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-minimal amd64 2.7.12-1~16.04 [28.1 kB] build 14-Oct-2019 14:12:32 Get:7 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython-stdlib amd64 2.7.12-1~16.04 [7768 B] build 14-Oct-2019 14:12:32 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python amd64 2.7.12-1~16.04 [137 kB] build 14-Oct-2019 14:12:33 Get:9 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 14-Oct-2019 14:12:33 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.2 [216 kB] build 14-Oct-2019 14:12:33 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.2 [21.2 kB] build 14-Oct-2019 14:12:34 Get:12 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 14-Oct-2019 14:12:34 Get:13 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 14-Oct-2019 14:12:35 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 14-Oct-2019 14:12:36 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 14-Oct-2019 14:12:37 Get:16 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 14-Oct-2019 14:12:37 Get:17 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 14-Oct-2019 14:12:38 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 14-Oct-2019 14:12:38 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.11 [131 kB] build 14-Oct-2019 14:12:39 Get:20 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.11 [260 kB] build 14-Oct-2019 14:12:39 Get:21 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 14-Oct-2019 14:12:40 Get:22 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 14-Oct-2019 14:12:41 Get:23 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarmadillo6 amd64 1:6.500.5+dfsg-1 [75.2 kB] build 14-Oct-2019 14:12:41 Get:24 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 14-Oct-2019 14:12:42 Get:25 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 14-Oct-2019 14:12:42 Get:26 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libepsilon1 amd64 0.9.2-3ubuntu1 [41.0 kB] build 14-Oct-2019 14:12:43 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 libfreexl1 amd64 1.0.2-1ubuntu0.1 [33.9 kB] build 14-Oct-2019 14:12:43 Get:28 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-3.5.0 amd64 3.5.0-1ubuntu2 [477 kB] build 14-Oct-2019 14:12:43 Get:29 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-c1v5 amd64 3.5.0-1ubuntu2 [52.4 kB] build 14-Oct-2019 14:12:44 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgif7 amd64 5.1.4-0.3~16.04.1 [30.5 kB] build 14-Oct-2019 14:12:44 Get:31 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] build 14-Oct-2019 14:12:44 Get:32 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf4-0-alt amd64 4.2.10-3.2 [264 kB] build 14-Oct-2019 14:12:45 Get:33 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libaec0 amd64 0.3.2-1 [18.0 kB] build 14-Oct-2019 14:12:45 Get:34 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsz2 amd64 0.3.2-1 [5048 B] build 14-Oct-2019 14:12:46 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 libhdf5-10 amd64 1.8.16+docs-4ubuntu1.1 [997 kB] build 14-Oct-2019 14:12:46 Get:36 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjasper1 amd64 1.900.1-debian1-2.4ubuntu1.2 [131 kB] build 14-Oct-2019 14:12:47 Get:37 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libminizip1 amd64 1.1-8 [20.3 kB] build 14-Oct-2019 14:12:47 Get:38 http://archive.ubuntu.com/ubuntu xenial/universe amd64 liburiparser1 amd64 0.8.4-1 [38.0 kB] build 14-Oct-2019 14:12:47 Get:39 http://archive.ubuntu.com/ubuntu 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previously unselected package libfreetype6:amd64. build 14-Oct-2019 14:14:40 Preparing to unpack .../libfreetype6_2.6.1-0.1ubuntu2.4_amd64.deb ... build 14-Oct-2019 14:14:41 Unpacking libfreetype6:amd64 (2.6.1-0.1ubuntu2.4) ... build 14-Oct-2019 14:14:42 Selecting previously unselected package libfontconfig1:amd64. build 14-Oct-2019 14:14:42 Preparing to unpack .../libfontconfig1_2.11.94-0ubuntu1.1_amd64.deb ... build 14-Oct-2019 14:14:42 Unpacking libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 14-Oct-2019 14:14:44 Selecting previously unselected package liblcms2-2:amd64. build 14-Oct-2019 14:14:44 Preparing to unpack .../liblcms2-2_2.6-3ubuntu2.1_amd64.deb ... build 14-Oct-2019 14:14:45 Unpacking liblcms2-2:amd64 (2.6-3ubuntu2.1) ... build 14-Oct-2019 14:14:46 Selecting previously unselected package libtiff5:amd64. build 14-Oct-2019 14:14:46 Preparing to unpack .../libtiff5_4.0.6-1ubuntu0.6_amd64.deb ... build 14-Oct-2019 14:14:46 Unpacking libtiff5:amd64 (4.0.6-1ubuntu0.6) ... build 14-Oct-2019 14:14:48 Selecting previously unselected package libpoppler58:amd64. build 14-Oct-2019 14:14:48 Preparing to unpack .../libpoppler58_0.41.0-0ubuntu1.14_amd64.deb ... build 14-Oct-2019 14:14:48 Unpacking libpoppler58:amd64 (0.41.0-0ubuntu1.14) ... build 14-Oct-2019 14:14:50 Selecting previously unselected package libpq5:amd64. build 14-Oct-2019 14:14:50 Preparing to unpack .../libpq5_9.5.19-0ubuntu0.16.04.1_amd64.deb ... build 14-Oct-2019 14:14:50 Unpacking libpq5:amd64 (9.5.19-0ubuntu0.16.04.1) ... build 14-Oct-2019 14:14:52 Selecting previously unselected package libspatialite7:amd64. build 14-Oct-2019 14:14:52 Preparing to unpack .../libspatialite7_4.3.0a-5_amd64.deb ... build 14-Oct-2019 14:14:52 Unpacking libspatialite7:amd64 (4.3.0a-5) ... build 14-Oct-2019 14:14:54 Selecting previously unselected package libwebp5:amd64. build 14-Oct-2019 14:14:54 Preparing to unpack .../libwebp5_0.4.4-1_amd64.deb ... build 14-Oct-2019 14:14:54 Unpacking libwebp5:amd64 (0.4.4-1) 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14-Oct-2019 14:15:03 Selecting previously unselected package gdal-bin. build 14-Oct-2019 14:15:03 Preparing to unpack .../gdal-bin_1.11.3+dfsg-3build2_amd64.deb ... build 14-Oct-2019 14:15:03 Unpacking gdal-bin (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:15:04 Selecting previously unselected package p7zip-full. build 14-Oct-2019 14:15:04 Preparing to unpack .../p7zip-full_9.20.1~dfsg.1-4.2ubuntu0.1_amd64.deb ... build 14-Oct-2019 14:15:04 Unpacking p7zip-full (9.20.1~dfsg.1-4.2ubuntu0.1) ... build 14-Oct-2019 14:15:06 Selecting previously unselected package python-numpy. build 14-Oct-2019 14:15:06 Preparing to unpack .../python-numpy_1%3a1.11.0-1ubuntu1_amd64.deb ... build 14-Oct-2019 14:15:06 Unpacking python-numpy (1:1.11.0-1ubuntu1) ... build 14-Oct-2019 14:15:08 Selecting previously unselected package python-gdal. build 14-Oct-2019 14:15:08 Preparing to unpack .../python-gdal_1.11.3+dfsg-3build2_amd64.deb ... build 14-Oct-2019 14:15:08 Unpacking python-gdal (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:15:09 Selecting previously unselected package proj-bin. build 14-Oct-2019 14:15:09 Preparing to unpack .../proj-bin_4.9.2-2_amd64.deb ... build 14-Oct-2019 14:15:10 Unpacking proj-bin (4.9.2-2) ... build 14-Oct-2019 14:15:11 Processing triggers for libc-bin (2.23-0ubuntu11) ... build 14-Oct-2019 14:15:11 Setting up sgml-base (1.26+nmu4ubuntu1) ... build 14-Oct-2019 14:15:12 Setting up libjpeg-turbo8:amd64 (1.4.2-0ubuntu3.1) ... build 14-Oct-2019 14:15:13 Setting up libblas-common (3.6.0-2ubuntu2) ... build 14-Oct-2019 14:15:14 Setting up libblas3 (3.6.0-2ubuntu2) ... build 14-Oct-2019 14:15:14 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 14-Oct-2019 14:15:14 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 14-Oct-2019 14:15:15 Setting up libpython-stdlib:amd64 (2.7.12-1~16.04) ... build 14-Oct-2019 14:15:16 Setting up python (2.7.12-1~16.04) ... build 14-Oct-2019 14:15:17 Setting up libjbig0:amd64 (2.1-3.1) ... build 14-Oct-2019 14:15:17 Setting up libmagic1:amd64 (1:5.25-2ubuntu1.2) ... build 14-Oct-2019 14:15:19 Setting up file (1:5.25-2ubuntu1.2) ... build 14-Oct-2019 14:15:19 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ... build 14-Oct-2019 14:15:20 Setting up ucf (3.0036) ... build 14-Oct-2019 14:15:21 debconf: unable to initialize frontend: Dialog build 14-Oct-2019 14:15:21 debconf: (TERM is not set, so the dialog frontend is not usable.) build 14-Oct-2019 14:15:21 debconf: falling back to frontend: Readline build 14-Oct-2019 14:15:21 debconf: unable to initialize frontend: Readline build 14-Oct-2019 14:15:21 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) build 14-Oct-2019 14:15:21 debconf: falling back to frontend: Teletype build 14-Oct-2019 14:15:21 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 14-Oct-2019 14:15:22 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ... build 14-Oct-2019 14:15:22 Setting up xml-core (0.13+nmu2) ... build 14-Oct-2019 14:15:24 Setting up fonts-dejavu-core (2.35-1) ... build 14-Oct-2019 14:15:28 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 14-Oct-2019 14:15:37 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.11) ... build 14-Oct-2019 14:15:38 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.11) ... build 14-Oct-2019 14:15:39 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 14-Oct-2019 14:15:39 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 14-Oct-2019 14:15:39 Setting up libarpack2 (3.3.0-1build2) ... build 14-Oct-2019 14:15:39 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 14-Oct-2019 14:15:40 Setting up libdap17v5:amd64 (3.15.1-7) ... build 14-Oct-2019 14:15:41 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 14-Oct-2019 14:15:42 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 14-Oct-2019 14:15:42 Setting up libfreexl1:amd64 (1.0.2-1ubuntu0.1) ... build 14-Oct-2019 14:15:43 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 14-Oct-2019 14:15:44 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 14-Oct-2019 14:15:44 Setting up libgif7:amd64 (5.1.4-0.3~16.04.1) ... build 14-Oct-2019 14:15:45 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 14-Oct-2019 14:15:46 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 14-Oct-2019 14:15:47 Setting up libaec0:amd64 (0.3.2-1) ... build 14-Oct-2019 14:15:48 Setting up libsz2:amd64 (0.3.2-1) ... build 14-Oct-2019 14:15:49 Setting up libhdf5-10:amd64 (1.8.16+docs-4ubuntu1.1) ... build 14-Oct-2019 14:15:49 Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.2) ... build 14-Oct-2019 14:15:50 Setting up libminizip1:amd64 (1.1-8) ... build 14-Oct-2019 14:15:51 Setting up liburiparser1:amd64 (0.8.4-1) ... build 14-Oct-2019 14:15:51 Setting up libkmlbase1:amd64 (1.3.0-1) ... build 14-Oct-2019 14:15:52 Setting up libkmldom1:amd64 (1.3.0-1) ... build 14-Oct-2019 14:15:52 Setting up libkmlengine1:amd64 (1.3.0-1) ... build 14-Oct-2019 14:15:53 Setting up mysql-common (5.7.27-0ubuntu0.16.04.1) ... build 14-Oct-2019 14:15:54 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 14-Oct-2019 14:15:54 Setting up libmysqlclient20:amd64 (5.7.27-0ubuntu0.16.04.1) ... build 14-Oct-2019 14:15:55 Setting up libnetcdf11 (1:4.4.0-2) ... build 14-Oct-2019 14:15:56 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 14-Oct-2019 14:15:56 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 14-Oct-2019 14:15:57 Setting up proj-data (4.9.2-2) ... build 14-Oct-2019 14:15:57 Setting up libproj9 (4.9.2-2) ... build 14-Oct-2019 14:15:58 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 14-Oct-2019 14:15:59 Setting up libopenjp2-7:amd64 (2.1.2-1.1+deb9u3build0.16.04.1) ... build 14-Oct-2019 14:16:00 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.4) ... build 14-Oct-2019 14:16:00 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 14-Oct-2019 14:16:01 Setting up liblcms2-2:amd64 (2.6-3ubuntu2.1) ... build 14-Oct-2019 14:16:02 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.6) ... build 14-Oct-2019 14:16:02 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.14) ... build 14-Oct-2019 14:16:03 Setting up libpq5:amd64 (9.5.19-0ubuntu0.16.04.1) ... build 14-Oct-2019 14:16:04 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 14-Oct-2019 14:16:04 Setting up libwebp5:amd64 (0.4.4-1) ... build 14-Oct-2019 14:16:05 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 14-Oct-2019 14:16:06 Setting up p7zip-full (9.20.1~dfsg.1-4.2ubuntu0.1) ... build 14-Oct-2019 14:16:07 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 14-Oct-2019 14:16:09 Setting up proj-bin (4.9.2-2) ... build 14-Oct-2019 14:16:10 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 14-Oct-2019 14:16:11 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:16:11 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:16:13 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:16:14 Setting up odbcinst (2.3.1-4.1) ... build 14-Oct-2019 14:16:15 Processing triggers for libc-bin (2.23-0ubuntu11) ... build 14-Oct-2019 14:16:16 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 14-Oct-2019 14:16:18 DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support build 14-Oct-2019 14:16:18 Collecting pip==9.0.3 build 14-Oct-2019 14:16:18 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 14-Oct-2019 14:16:18 Installing collected packages: pip build 14-Oct-2019 14:16:18 Found existing installation: pip 19.3 build 14-Oct-2019 14:16:18 Uninstalling pip-19.3: build 14-Oct-2019 14:16:19 Successfully uninstalled pip-19.3 build 14-Oct-2019 14:16:19 Successfully installed pip-9.0.3 build 14-Oct-2019 14:16:20 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 14-Oct-2019 14:16:20 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 14-Oct-2019 14:16:20 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:16:20 Collecting pika>=1.0.0 (from -r /home/clowder/requirements.txt (line 2)) build 14-Oct-2019 14:16:20 Downloading https://files.pythonhosted.org/packages/a1/ae/8bedf0e9f1c0c5d046db3a7428a4227fe36ec1b8e25607f3c38ac9bf513c/pika-1.1.0-py2.py3-none-any.whl (148kB) build 14-Oct-2019 14:16:20 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:16:20 Collecting requests>=2.10.0 (from -r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:16:20 Downloading https://files.pythonhosted.org/packages/51/bd/23c926cd341ea6b7dd0b2a00aba99ae0f828be89d72b2190f27c11d4b7fb/requests-2.22.0-py2.py3-none-any.whl (57kB) build 14-Oct-2019 14:16:20 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:16:20 Requirement already up-to-date: wheel>=0.24.0 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 4)) build 14-Oct-2019 14:16:20 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 14-Oct-2019 14:16:21 Downloading https://files.pythonhosted.org/packages/ce/2e/87461bfbb7e561203b759b3f7f639e2144226604372830d00a8279960ae1/httplib2-0.14.0.tar.gz (219kB) build 14-Oct-2019 14:16:21 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 14-Oct-2019 14:16:21 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 14-Oct-2019 14:16:21 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:16:21 Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:16:21 Downloading https://files.pythonhosted.org/packages/e0/da/55f51ea951e1b7c63a579c09dd7db825bb730ec1fe9c0180fc77bfb31448/urllib3-1.25.6-py2.py3-none-any.whl (125kB) build 14-Oct-2019 14:16:21 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:16:21 Requirement already up-to-date: certifi>=2017.4.17 in /usr/local/lib/python2.7/dist-packages (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:16:22 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:16:22 Requirement already up-to-date: chardet<3.1.0,>=3.0.2 in /usr/local/lib/python2.7/dist-packages (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:16:22 Cache entry deserialization failed, entry ignored build 14-Oct-2019 14:16:22 Requirement already up-to-date: idna<2.9,>=2.5 in /usr/local/lib/python2.7/dist-packages (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:16:22 Building wheels for collected packages: gsconfig, httplib2, gisdata build 14-Oct-2019 14:16:22 Running setup.py bdist_wheel for gsconfig: started build 14-Oct-2019 14:16:22 Running setup.py bdist_wheel for gsconfig: finished with status 'done' build 14-Oct-2019 14:16:22 Stored in directory: /root/.cache/pip/wheels/87/28/4d/d5bbfd0e2971455885ce43e19d1339fd271b3af8dee43f25aa build 14-Oct-2019 14:16:22 Running setup.py bdist_wheel for httplib2: started build 14-Oct-2019 14:16:22 Running setup.py bdist_wheel for httplib2: finished with status 'done' build 14-Oct-2019 14:16:22 Stored in directory: /root/.cache/pip/wheels/51/ab/65/f318b4271019823cf7d7c178ac76a8ea4d6e6271fe9f5ba488 build 14-Oct-2019 14:16:22 Running setup.py bdist_wheel for gisdata: started build 14-Oct-2019 14:16:23 Running setup.py bdist_wheel for gisdata: finished with status 'done' build 14-Oct-2019 14:16:23 Stored in directory: /root/.cache/pip/wheels/93/56/9e/9abf7bddfdf9ff72b71678a8bdfe35a3ab058e1b10722b361e build 14-Oct-2019 14:16:23 Successfully built gsconfig httplib2 gisdata build 14-Oct-2019 14:16:23 Installing collected packages: httplib2, gisdata, gsconfig, pika, urllib3, requests build 14-Oct-2019 14:16:23 Found existing installation: pika 1.0.0 build 14-Oct-2019 14:16:23 Uninstalling pika-1.0.0: build 14-Oct-2019 14:16:30 Successfully uninstalled pika-1.0.0 build 14-Oct-2019 14:16:30 Found existing installation: urllib3 1.24.3 build 14-Oct-2019 14:16:30 Uninstalling urllib3-1.24.3: build 14-Oct-2019 14:16:38 Successfully uninstalled urllib3-1.24.3 build 14-Oct-2019 14:16:38 Found existing installation: requests 2.21.0 build 14-Oct-2019 14:16:38 Uninstalling requests-2.21.0: build 14-Oct-2019 14:16:43 Successfully uninstalled requests-2.21.0 build 14-Oct-2019 14:16:43 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.14.0 pika-1.1.0 requests-2.22.0 urllib3-1.25.6 build 14-Oct-2019 14:16:43 You are using pip version 9.0.3, however version 19.3 is available. build 14-Oct-2019 14:16:43 You should consider upgrading via the 'pip install --upgrade pip' command. build 14-Oct-2019 14:16:48 Removing intermediate container 199df93b31e5 build 14-Oct-2019 14:16:48 ---> 56f64ce12714 build 14-Oct-2019 14:16:48 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 14-Oct-2019 14:16:49 ---> Running in 4b818df8072b build 14-Oct-2019 14:16:50 Removing intermediate container 4b818df8072b build 14-Oct-2019 14:16:50 ---> 99d85348a5f6 build 14-Oct-2019 14:16:50 Step 6/8 : CMD ["extractor"] build 14-Oct-2019 14:16:50 ---> Running in b9dc5009e479 build 14-Oct-2019 14:16:52 Removing intermediate container b9dc5009e479 build 14-Oct-2019 14:16:52 ---> 6dc6038fa5e6 build 14-Oct-2019 14:16:52 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geoshp.preview" MAIN_SCRIPT="ncsa.geo.shp.py" GEOSERVER_URL="" GEOSERVER_USERNAME="admin" GEOSERVER_PASSWORD="geoserver" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 14-Oct-2019 14:16:52 ---> Running in 6f307f95997c build 14-Oct-2019 14:16:53 Removing intermediate container 6f307f95997c build 14-Oct-2019 14:16:53 ---> 6ef6290e4849 build 14-Oct-2019 14:16:53 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json rasterTemplate.xml /home/clowder/ build 14-Oct-2019 14:16:54 ---> cf95c271ebd2 build 14-Oct-2019 14:16:54 Successfully built cf95c271ebd2 build 14-Oct-2019 14:16:55 Successfully tagged 21384:latest build 14-Oct-2019 14:16:55 The push refers to repository [docker.io/clowder/extractors-geoshp-preview] build 14-Oct-2019 14:16:55 a26a4253f3ee: Preparing build 14-Oct-2019 14:16:55 5dfb2651f8e7: Preparing build 14-Oct-2019 14:16:55 09e77133317f: Preparing build 14-Oct-2019 14:16:55 d8136157e163: Preparing build 14-Oct-2019 14:16:55 c808cf8c9ef8: Preparing build 14-Oct-2019 14:16:55 5f25474732fa: Preparing build 14-Oct-2019 14:16:55 03d26a86cc3e: Preparing build 14-Oct-2019 14:16:55 f1c0e1d76ba7: Preparing build 14-Oct-2019 14:16:55 b8c5d7f817e8: Preparing build 14-Oct-2019 14:16:55 9acfe225486b: Preparing build 14-Oct-2019 14:16:55 90109bbe5b76: Preparing build 14-Oct-2019 14:16:55 cb81b9d8a6c9: Preparing build 14-Oct-2019 14:16:55 ea69392465ad: Preparing build 14-Oct-2019 14:16:55 b8c5d7f817e8: Waiting build 14-Oct-2019 14:16:55 9acfe225486b: Waiting build 14-Oct-2019 14:16:55 90109bbe5b76: Waiting build 14-Oct-2019 14:16:55 cb81b9d8a6c9: Waiting build 14-Oct-2019 14:16:55 03d26a86cc3e: Waiting build 14-Oct-2019 14:16:55 5f25474732fa: Waiting build 14-Oct-2019 14:16:55 ea69392465ad: Waiting build 14-Oct-2019 14:16:55 f1c0e1d76ba7: Waiting build 14-Oct-2019 14:16:56 d8136157e163: Mounted from clowder/extractors-geotiff-preview build 14-Oct-2019 14:16:56 c808cf8c9ef8: Mounted from clowder/extractors-geotiff-preview build 14-Oct-2019 14:16:57 5f25474732fa: Mounted from clowder/extractors-geotiff-preview build 14-Oct-2019 14:16:57 09e77133317f: Pushed build 14-Oct-2019 14:16:57 03d26a86cc3e: Mounted from clowder/extractors-geotiff-preview build 14-Oct-2019 14:16:57 a26a4253f3ee: Pushed build 14-Oct-2019 14:16:58 9acfe225486b: Layer already exists build 14-Oct-2019 14:16:58 90109bbe5b76: Layer already exists build 14-Oct-2019 14:16:58 b8c5d7f817e8: Mounted from clowder/extractors-geotiff-preview build 14-Oct-2019 14:16:58 cb81b9d8a6c9: Layer already exists build 14-Oct-2019 14:16:58 f1c0e1d76ba7: Mounted from clowder/extractors-geotiff-preview build 14-Oct-2019 14:16:58 ea69392465ad: Layer already exists build 14-Oct-2019 14:17:09 5dfb2651f8e7: Pushed build 14-Oct-2019 14:17:11 latest: digest: sha256:5e93861f2c7ad6b1afb632eabf67c944093d271f346b8acff2aa48e5f1ad9d25 size: 3031 build 14-Oct-2019 14:17:12 Untagged: clowder/extractors-geoshp-preview:latest build 14-Oct-2019 14:17:12 Untagged: clowder/extractors-geoshp-preview@sha256:5e93861f2c7ad6b1afb632eabf67c944093d271f346b8acff2aa48e5f1ad9d25 build 14-Oct-2019 14:17:12 Untagged: 21384:latest build 14-Oct-2019 14:17:12 Deleted: sha256:cf95c271ebd2660dbb1c1848c7cf2786d09fe51cc1c68ed5e526925e74b83afd build 14-Oct-2019 14:17:12 Deleted: sha256:07825a6d41142d8b3efa84c7ed7030c6708f0b00a442572151ddc326fc1f6fc0 build 14-Oct-2019 14:17:12 Deleted: sha256:6ef6290e4849f742e44fc638d6992837b531e7361707c074dfe5f15f7f5d29e1 build 14-Oct-2019 14:17:12 Deleted: sha256:6dc6038fa5e633d0aae8bff259df8bd3f248a940aa246ca138cecd3edf33af8e build 14-Oct-2019 14:17:12 Deleted: sha256:99d85348a5f6bcab22a48f42c86b74624c446f736338e8a0dafcaf5df35b48f1 build 14-Oct-2019 14:17:12 Deleted: sha256:56f64ce12714e5c963700c951022eb76f3877ed92a84a980c0a09a56b1687b14 build 14-Oct-2019 14:17:12 Deleted: sha256:17fcdc48e6471bf1020b3b4e10e5cf13492347e7d956533570b54be0b96420f6 build 14-Oct-2019 14:17:12 Deleted: sha256:98cd3de7e594ac665c86de5a0be118dfe86b6bbb8f614d132a3f0f0ef818305f build 14-Oct-2019 14:17:12 Deleted: sha256:b3368485af4ac2d3352192a32fcf6f5716f23718ced593f8c9e13c4ac412b1c9 build 14-Oct-2019 14:17:12 Deleted: sha256:9700c6a53b1fb734077440522acf0ddc6a78e5b0442a504a8caa9256cbf11f4a build 14-Oct-2019 14:17:12 Sending build context to Docker daemon 1.479MB build 14-Oct-2019 14:17:12 build 14-Oct-2019 14:17:12 Step 1/8 : FROM clowder/pyclowder:2 build 14-Oct-2019 14:17:12 ---> a3ddbd70e26e build 14-Oct-2019 14:17:12 Step 2/8 : MAINTAINER Yong Wook Kim build 14-Oct-2019 14:17:13 ---> Running in aa8df499742a build 14-Oct-2019 14:17:14 Removing intermediate container aa8df499742a build 14-Oct-2019 14:17:14 ---> de824e2a1f71 build 14-Oct-2019 14:17:14 Step 3/8 : COPY requirements.txt /home/clowder/ build 14-Oct-2019 14:17:15 ---> e5fe0cadd99e build 14-Oct-2019 14:17:15 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full python-pyproj git && pip install --upgrade pip==9.0.3 && pip install -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 14-Oct-2019 14:17:15 ---> Running in 32fff37cc058 build 14-Oct-2019 14:17:17 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [109 kB] build 14-Oct-2019 14:17:17 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 14-Oct-2019 14:17:17 Get:3 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [971 kB] build 14-Oct-2019 14:17:17 Get:4 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 14-Oct-2019 14:17:17 Get:5 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [587 kB] build 14-Oct-2019 14:17:18 Get:6 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 14-Oct-2019 14:17:18 Get:7 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [6276 B] build 14-Oct-2019 14:17:18 Get:8 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 14-Oct-2019 14:17:19 Get:9 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 14-Oct-2019 14:17:20 Get:10 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 14-Oct-2019 14:17:20 Get:11 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 14-Oct-2019 14:17:21 Get:12 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 14-Oct-2019 14:17:21 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1348 kB] build 14-Oct-2019 14:17:22 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 14-Oct-2019 14:17:22 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [991 kB] build 14-Oct-2019 14:17:23 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [19.2 kB] build 14-Oct-2019 14:17:23 Get:17 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7942 B] build 14-Oct-2019 14:17:24 Get:18 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8807 B] build 14-Oct-2019 14:17:24 Fetched 16.1 MB in 6s (2374 kB/s) build 14-Oct-2019 14:17:24 Reading package lists... build 14-Oct-2019 14:17:25 Reading package lists... build 14-Oct-2019 14:17:25 Building dependency tree... build 14-Oct-2019 14:17:25 Reading state information... build 14-Oct-2019 14:17:26 The following additional packages will be installed: build 14-Oct-2019 14:17:26 fontconfig-config fonts-dejavu-core git-man ifupdown iproute2 build 14-Oct-2019 14:17:26 isc-dhcp-client isc-dhcp-common less libaec0 libarmadillo6 libarpack2 build 14-Oct-2019 14:17:26 libatm1 libblas-common libblas3 libbsd0 libdap17v5 libdapclient6v5 build 14-Oct-2019 14:17:26 libdns-export162 libedit2 libepsilon1 liberror-perl libfontconfig1 build 14-Oct-2019 14:17:26 libfreetype6 libfreexl1 libgdal1i libgdbm3 libgeos-3.5.0 libgeos-c1v5 build 14-Oct-2019 14:17:26 libgfortran3 libgif7 libhdf4-0-alt libhdf5-10 libicu55 libisc-export160 build 14-Oct-2019 14:17:26 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libkmlbase1 libkmldom1 build 14-Oct-2019 14:17:26 libkmlengine1 liblapack3 liblcms2-2 libltdl7 libmagic1 libminizip1 libmnl0 build 14-Oct-2019 14:17:26 libmysqlclient20 libnetcdf11 libodbc1 libogdi3.2 libopenjp2-7 libperl5.22 build 14-Oct-2019 14:17:26 libpng12-0 libpoppler58 libpopt0 libpq5 libproj9 libpython-stdlib build 14-Oct-2019 14:17:26 libquadmath0 libspatialite7 libsuperlu4 libsz2 libtiff5 liburiparser1 build 14-Oct-2019 14:17:26 libwebp5 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxerces-c3.1 build 14-Oct-2019 14:17:26 libxext6 libxml2 libxmuu1 libxtables11 mysql-common netbase odbcinst build 14-Oct-2019 14:17:26 odbcinst1debian2 openssh-client patch perl perl-modules-5.22 proj-bin build 14-Oct-2019 14:17:26 proj-data python python-minimal python-numpy rename rsync sgml-base ucf build 14-Oct-2019 14:17:26 xauth xml-core build 14-Oct-2019 14:17:26 Suggested packages: build 14-Oct-2019 14:17:26 gettext-base git-daemon-run | git-daemon-sysvinit git-doc git-el git-email build 14-Oct-2019 14:17:26 git-gui gitk gitweb git-arch git-cvs git-mediawiki git-svn ppp rdnssd build 14-Oct-2019 14:17:26 iproute2-doc resolvconf avahi-autoipd isc-dhcp-client-ddns apparmor build 14-Oct-2019 14:17:26 libhdf4-doc libhdf4-alt-dev hdf4-tools libnetcdf4 libjasper-runtime build 14-Oct-2019 14:17:26 liblcms2-utils libmyodbc odbc-postgresql tdsodbc unixodbc-bin ogdi-bin build 14-Oct-2019 14:17:26 poppler-data ssh-askpass libpam-ssh keychain monkeysphere p7zip-rar ed build 14-Oct-2019 14:17:26 diffutils-doc perl-doc libterm-readline-gnu-perl build 14-Oct-2019 14:17:26 | libterm-readline-perl-perl make python-doc python-tk gcc gfortran build 14-Oct-2019 14:17:26 python-dev python-nose python-numpy-dbg python-numpy-doc openssh-server build 14-Oct-2019 14:17:26 sgml-base-doc debhelper build 14-Oct-2019 14:17:26 The following NEW packages will be installed: build 14-Oct-2019 14:17:26 file fontconfig-config fonts-dejavu-core gdal-bin git git-man ifupdown build 14-Oct-2019 14:17:26 iproute2 isc-dhcp-client isc-dhcp-common less libaec0 libarmadillo6 build 14-Oct-2019 14:17:26 libarpack2 libatm1 libblas-common libblas3 libbsd0 libdap17v5 build 14-Oct-2019 14:17:26 libdapclient6v5 libdns-export162 libedit2 libepsilon1 liberror-perl build 14-Oct-2019 14:17:26 libfontconfig1 libfreetype6 libfreexl1 libgdal1i libgdbm3 libgeos-3.5.0 build 14-Oct-2019 14:17:26 libgeos-c1v5 libgfortran3 libgif7 libhdf4-0-alt libhdf5-10 libicu55 build 14-Oct-2019 14:17:26 libisc-export160 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libkmlbase1 build 14-Oct-2019 14:17:26 libkmldom1 libkmlengine1 liblapack3 liblcms2-2 libltdl7 libmagic1 build 14-Oct-2019 14:17:26 libminizip1 libmnl0 libmysqlclient20 libnetcdf11 libodbc1 libogdi3.2 build 14-Oct-2019 14:17:26 libopenjp2-7 libperl5.22 libpng12-0 libpoppler58 libpopt0 libpq5 libproj9 build 14-Oct-2019 14:17:26 libpython-stdlib libquadmath0 libspatialite7 libsuperlu4 libsz2 libtiff5 build 14-Oct-2019 14:17:26 liburiparser1 libwebp5 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 build 14-Oct-2019 14:17:26 libxerces-c3.1 libxext6 libxml2 libxmuu1 libxtables11 mysql-common netbase build 14-Oct-2019 14:17:26 odbcinst odbcinst1debian2 openssh-client p7zip-full patch perl build 14-Oct-2019 14:17:26 perl-modules-5.22 proj-bin proj-data python python-gdal python-minimal build 14-Oct-2019 14:17:26 python-numpy python-pyproj rename rsync sgml-base ucf xauth xml-core build 14-Oct-2019 14:17:26 0 upgraded, 101 newly installed, 0 to remove and 5 not upgraded. build 14-Oct-2019 14:17:26 Need to get 47.0 MB of archives. build 14-Oct-2019 14:17:26 After this operation, 213 MB of additional disk space will be used. build 14-Oct-2019 14:17:26 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatm1 amd64 1:2.5.1-1.5 [24.2 kB] build 14-Oct-2019 14:17:26 Get:2 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmnl0 amd64 1.0.3-5 [12.0 kB] build 14-Oct-2019 14:17:27 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpopt0 amd64 1.16-10 [26.0 kB] build 14-Oct-2019 14:17:27 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgdbm3 amd64 1.8.3-13.1 [16.9 kB] build 14-Oct-2019 14:17:27 Get:5 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxau6 amd64 1:1.0.8-1 [8376 B] build 14-Oct-2019 14:17:27 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxdmcp6 amd64 1:1.1.2-1.1 [11.0 kB] build 14-Oct-2019 14:17:28 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb1 amd64 1.11.1-1ubuntu1 [40.0 kB] build 14-Oct-2019 14:17:28 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libx11-data all 2:1.6.3-1ubuntu2.1 [113 kB] build 14-Oct-2019 14:17:29 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libx11-6 amd64 2:1.6.3-1ubuntu2.1 [570 kB] build 14-Oct-2019 14:17:29 Get:10 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxext6 amd64 2:1.3.3-1 [29.4 kB] build 14-Oct-2019 14:17:30 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 14-Oct-2019 14:17:30 Get:12 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 14-Oct-2019 14:17:30 Get:13 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 14-Oct-2019 14:17:31 Get:14 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 14-Oct-2019 14:17:31 Get:15 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 14-Oct-2019 14:17:32 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-modules-5.22 all 5.22.1-9ubuntu0.6 [2629 kB] build 14-Oct-2019 14:17:33 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libperl5.22 amd64 5.22.1-9ubuntu0.6 [3405 kB] build 14-Oct-2019 14:17:34 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl amd64 5.22.1-9ubuntu0.6 [237 kB] build 14-Oct-2019 14:17:34 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-minimal amd64 2.7.12-1~16.04 [28.1 kB] build 14-Oct-2019 14:17:35 Get:20 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython-stdlib amd64 2.7.12-1~16.04 [7768 B] build 14-Oct-2019 14:17:35 Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python amd64 2.7.12-1~16.04 [137 kB] build 14-Oct-2019 14:17:35 Get:22 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 14-Oct-2019 14:17:36 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.2 [216 kB] build 14-Oct-2019 14:17:36 Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.2 [21.2 kB] build 14-Oct-2019 14:17:37 Get:25 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 iproute2 amd64 4.3.0-1ubuntu3.16.04.5 [523 kB] build 14-Oct-2019 14:17:37 Get:26 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ifupdown amd64 0.8.10ubuntu1.4 [54.9 kB] build 14-Oct-2019 14:17:38 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libisc-export160 amd64 1:9.10.3.dfsg.P4-8ubuntu1.15 [153 kB] build 14-Oct-2019 14:17:38 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdns-export162 amd64 1:9.10.3.dfsg.P4-8ubuntu1.15 [665 kB] build 14-Oct-2019 14:17:39 Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-client amd64 4.3.3-5ubuntu12.10 [224 kB] build 14-Oct-2019 14:17:40 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-common amd64 4.3.3-5ubuntu12.10 [105 kB] build 14-Oct-2019 14:17:40 Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 less amd64 481-2.1ubuntu0.2 [110 kB] build 14-Oct-2019 14:17:41 Get:32 http://archive.ubuntu.com/ubuntu xenial/main amd64 libbsd0 amd64 0.8.2-1 [41.7 kB] build 14-Oct-2019 14:17:41 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 14-Oct-2019 14:17:42 Get:34 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxtables11 amd64 1.6.0-2ubuntu3 [27.2 kB] build 14-Oct-2019 14:17:42 Get:35 http://archive.ubuntu.com/ubuntu xenial/main amd64 netbase all 5.3 [12.9 kB] build 14-Oct-2019 14:17:42 Get:36 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 14-Oct-2019 14:17:42 Get:37 http://archive.ubuntu.com/ubuntu xenial/main amd64 libedit2 amd64 3.1-20150325-1ubuntu2 [76.5 kB] build 14-Oct-2019 14:17:43 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 14-Oct-2019 14:17:44 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 14-Oct-2019 14:17:45 Get:40 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxmuu1 amd64 2:1.1.2-2 [9674 B] build 14-Oct-2019 14:17:45 Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 openssh-client amd64 1:7.2p2-4ubuntu2.8 [590 kB] build 14-Oct-2019 14:17:46 Get:42 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 rsync amd64 3.1.1-3ubuntu1.2 [329 kB] build 14-Oct-2019 14:17:46 Get:43 http://archive.ubuntu.com/ubuntu xenial/main amd64 xauth amd64 1:1.0.9-1ubuntu2 [22.7 kB] build 14-Oct-2019 14:17:47 Get:44 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 14-Oct-2019 14:17:47 Get:45 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 14-Oct-2019 14:17:48 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 14-Oct-2019 14:17:48 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.11 [131 kB] build 14-Oct-2019 14:17:49 Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.11 [260 kB] build 14-Oct-2019 14:17:50 Get:49 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 14-Oct-2019 14:17:50 Get:50 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 14-Oct-2019 14:17:51 Get:51 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initialize frontend: Dialog build 14-Oct-2019 14:21:49 debconf: (TERM is not set, so the dialog frontend is not usable.) build 14-Oct-2019 14:21:49 debconf: falling back to frontend: Readline build 14-Oct-2019 14:21:49 Setting up libedit2:amd64 (3.1-20150325-1ubuntu2) ... build 14-Oct-2019 14:21:50 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 14-Oct-2019 14:21:51 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ... build 14-Oct-2019 14:21:51 Setting up libxmuu1:amd64 (2:1.1.2-2) ... build 14-Oct-2019 14:21:52 Setting up openssh-client (1:7.2p2-4ubuntu2.8) ... build 14-Oct-2019 14:21:54 Setting up rsync (3.1.1-3ubuntu1.2) ... build 14-Oct-2019 14:21:54 invoke-rc.d: could not determine current runlevel build 14-Oct-2019 14:21:54 invoke-rc.d: policy-rc.d denied execution of restart. build 14-Oct-2019 14:21:54 Setting up xauth (1:1.0.9-1ubuntu2) ... build 14-Oct-2019 14:21:55 Setting up xml-core (0.13+nmu2) ... build 14-Oct-2019 14:21:56 Setting up fonts-dejavu-core (2.35-1) ... build 14-Oct-2019 14:22:00 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 14-Oct-2019 14:22:10 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.11) ... build 14-Oct-2019 14:22:10 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.11) ... build 14-Oct-2019 14:22:11 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 14-Oct-2019 14:22:12 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 14-Oct-2019 14:22:12 Setting up libarpack2 (3.3.0-1build2) ... build 14-Oct-2019 14:22:13 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 14-Oct-2019 14:22:13 Setting up libdap17v5:amd64 (3.15.1-7) ... build 14-Oct-2019 14:22:14 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 14-Oct-2019 14:22:15 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 14-Oct-2019 14:22:15 Setting up libfreexl1:amd64 (1.0.2-1ubuntu0.1) ... build 14-Oct-2019 14:22:16 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 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(5.7.27-0ubuntu0.16.04.1) ... build 14-Oct-2019 14:22:27 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 14-Oct-2019 14:22:27 Setting up libmysqlclient20:amd64 (5.7.27-0ubuntu0.16.04.1) ... build 14-Oct-2019 14:22:28 Setting up libnetcdf11 (1:4.4.0-2) ... build 14-Oct-2019 14:22:29 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 14-Oct-2019 14:22:30 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 14-Oct-2019 14:22:30 Setting up proj-data (4.9.2-2) ... build 14-Oct-2019 14:22:31 Setting up libproj9 (4.9.2-2) ... build 14-Oct-2019 14:22:32 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 14-Oct-2019 14:22:32 Setting up libopenjp2-7:amd64 (2.1.2-1.1+deb9u3build0.16.04.1) ... build 14-Oct-2019 14:22:33 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.4) ... build 14-Oct-2019 14:22:34 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 14-Oct-2019 14:22:34 Setting up liblcms2-2:amd64 (2.6-3ubuntu2.1) ... build 14-Oct-2019 14:22:35 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.6) ... build 14-Oct-2019 14:22:36 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.14) ... build 14-Oct-2019 14:22:37 Setting up libpq5:amd64 (9.5.19-0ubuntu0.16.04.1) ... build 14-Oct-2019 14:22:37 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 14-Oct-2019 14:22:38 Setting up libwebp5:amd64 (0.4.4-1) ... build 14-Oct-2019 14:22:39 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 14-Oct-2019 14:22:39 Setting up liberror-perl (0.17-1.2) ... build 14-Oct-2019 14:22:40 Setting up git-man (1:2.7.4-0ubuntu1.6) ... build 14-Oct-2019 14:22:40 Setting up git (1:2.7.4-0ubuntu1.6) ... build 14-Oct-2019 14:22:41 Setting up p7zip-full (9.20.1~dfsg.1-4.2ubuntu0.1) ... build 14-Oct-2019 14:22:42 Setting up patch (2.7.5-1ubuntu0.16.04.2) ... build 14-Oct-2019 14:22:42 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 14-Oct-2019 14:22:45 Setting up python-pyproj (1.9.5.1-1build1) ... build 14-Oct-2019 14:22:46 Setting up rename (0.20-4) ... build 14-Oct-2019 14:22:46 update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode build 14-Oct-2019 14:22:47 Setting up proj-bin (4.9.2-2) ... build 14-Oct-2019 14:22:48 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 14-Oct-2019 14:22:49 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:22:49 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:22:50 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 14-Oct-2019 14:22:52 Setting up odbcinst (2.3.1-4.1) ... build 14-Oct-2019 14:22:53 Processing triggers for libc-bin (2.23-0ubuntu11) ... build 14-Oct-2019 14:22:53 Processing triggers for systemd (229-4ubuntu21.22) ... build 14-Oct-2019 14:22:54 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 14-Oct-2019 14:22:56 DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support build 14-Oct-2019 14:22:56 Collecting pip==9.0.3 build 14-Oct-2019 14:22:56 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 14-Oct-2019 14:22:56 Installing collected packages: pip build 14-Oct-2019 14:22:56 Found existing installation: pip 19.3 build 14-Oct-2019 14:22:56 Uninstalling pip-19.3: build 14-Oct-2019 14:22:57 Successfully uninstalled pip-19.3 build 14-Oct-2019 14:22:57 Successfully installed pip-9.0.3 build 14-Oct-2019 14:22:58 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 14-Oct-2019 14:22:58 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 14-Oct-2019 14:22:58 Requirement already satisfied: pika>=1.0.0 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 2)) build 14-Oct-2019 14:22:58 Requirement already satisfied: requests>=2.10.0 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:22:58 Requirement already satisfied: wheel>=0.24.0 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 4)) build 14-Oct-2019 14:22:58 Collecting xmltodict==0.11.0 (from -r /home/clowder/requirements.txt (line 5)) build 14-Oct-2019 14:22:58 Downloading https://files.pythonhosted.org/packages/42/a9/7e99652c6bc619d19d58cdd8c47560730eb5825d43a7e25db2e1d776ceb7/xmltodict-0.11.0-py2.py3-none-any.whl build 14-Oct-2019 14:22:58 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 14-Oct-2019 14:22:58 Downloading https://files.pythonhosted.org/packages/ce/2e/87461bfbb7e561203b759b3f7f639e2144226604372830d00a8279960ae1/httplib2-0.14.0.tar.gz (219kB) build 14-Oct-2019 14:22:59 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 14-Oct-2019 14:22:59 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 14-Oct-2019 14:22:59 Requirement already satisfied: certifi>=2017.4.17 in /usr/local/lib/python2.7/dist-packages (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:22:59 Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /usr/local/lib/python2.7/dist-packages (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:22:59 Requirement already satisfied: idna<2.9,>=2.5 in /usr/local/lib/python2.7/dist-packages (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:22:59 Requirement already satisfied: urllib3<1.25,>=1.21.1 in /usr/local/lib/python2.7/dist-packages (from requests>=2.10.0->-r /home/clowder/requirements.txt (line 3)) build 14-Oct-2019 14:22:59 Building wheels for collected packages: gsconfig, httplib2, gisdata build 14-Oct-2019 14:22:59 Running setup.py bdist_wheel for gsconfig: started build 14-Oct-2019 14:22:59 Running setup.py bdist_wheel for gsconfig: finished with status 'done' build 14-Oct-2019 14:22:59 Stored in directory: /root/.cache/pip/wheels/87/28/4d/d5bbfd0e2971455885ce43e19d1339fd271b3af8dee43f25aa build 14-Oct-2019 14:22:59 Running setup.py bdist_wheel for httplib2: started build 14-Oct-2019 14:22:59 Running setup.py bdist_wheel for httplib2: finished with status 'done' build 14-Oct-2019 14:22:59 Stored in directory: /root/.cache/pip/wheels/51/ab/65/f318b4271019823cf7d7c178ac76a8ea4d6e6271fe9f5ba488 build 14-Oct-2019 14:22:59 Running setup.py bdist_wheel for gisdata: started build 14-Oct-2019 14:23:00 Running setup.py bdist_wheel for gisdata: finished with status 'done' build 14-Oct-2019 14:23:00 Stored in directory: /root/.cache/pip/wheels/93/56/9e/9abf7bddfdf9ff72b71678a8bdfe35a3ab058e1b10722b361e build 14-Oct-2019 14:23:00 Successfully built gsconfig httplib2 gisdata build 14-Oct-2019 14:23:00 Installing collected packages: httplib2, gisdata, gsconfig, xmltodict build 14-Oct-2019 14:23:00 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.14.0 xmltodict-0.11.0 build 14-Oct-2019 14:23:00 You are using pip version 9.0.3, however version 19.3 is available. build 14-Oct-2019 14:23:00 You should consider upgrading via the 'pip install --upgrade pip' command. build 14-Oct-2019 14:23:06 Removing intermediate container 32fff37cc058 build 14-Oct-2019 14:23:06 ---> 701015982b45 build 14-Oct-2019 14:23:06 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 14-Oct-2019 14:23:07 ---> Running in d792af1fa8ec build 14-Oct-2019 14:23:08 Removing intermediate container d792af1fa8ec build 14-Oct-2019 14:23:08 ---> 98e668934378 build 14-Oct-2019 14:23:08 Step 6/8 : CMD ["extractor"] build 14-Oct-2019 14:23:08 ---> Running in a03fd8ed2ceb build 14-Oct-2019 14:23:09 Removing intermediate container a03fd8ed2ceb build 14-Oct-2019 14:23:09 ---> ee7653570c91 build 14-Oct-2019 14:23:09 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.pycsw.extractor" MAIN_SCRIPT="ncsa.geo.pycsw.py" GEOSERVER_URL="" GEOSERVER_WORKSPACE="clowder" PYCSW_URL="http://localhost:8000/pycsw" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 14-Oct-2019 14:23:10 ---> Running in 6a1f6cdce23e build 14-Oct-2019 14:23:12 Removing intermediate container 6a1f6cdce23e build 14-Oct-2019 14:23:12 ---> 450176d904b8 build 14-Oct-2019 14:23:12 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json pycsw_insert_template.xml pycsw_remove_template.xml /home/clowder/ build 14-Oct-2019 14:23:15 ---> 3a5a17a79bd9 build 14-Oct-2019 14:23:15 Successfully built 3a5a17a79bd9 build 14-Oct-2019 14:23:15 Successfully tagged 21384:latest build 14-Oct-2019 14:23:15 The push refers to repository [docker.io/clowder/extractors-pycsw] build 14-Oct-2019 14:23:15 654147fae9a1: Preparing build 14-Oct-2019 14:23:15 a378081eccd9: Preparing build 14-Oct-2019 14:23:15 c946bc60bdc9: Preparing build 14-Oct-2019 14:23:15 d8136157e163: Preparing build 14-Oct-2019 14:23:15 c808cf8c9ef8: Preparing build 14-Oct-2019 14:23:15 5f25474732fa: Preparing build 14-Oct-2019 14:23:15 03d26a86cc3e: Preparing build 14-Oct-2019 14:23:15 f1c0e1d76ba7: Preparing build 14-Oct-2019 14:23:15 b8c5d7f817e8: Preparing build 14-Oct-2019 14:23:15 9acfe225486b: Preparing build 14-Oct-2019 14:23:15 90109bbe5b76: Preparing build 14-Oct-2019 14:23:15 cb81b9d8a6c9: Preparing build 14-Oct-2019 14:23:15 ea69392465ad: Preparing build 14-Oct-2019 14:23:15 5f25474732fa: Waiting build 14-Oct-2019 14:23:15 03d26a86cc3e: Waiting build 14-Oct-2019 14:23:15 f1c0e1d76ba7: Waiting build 14-Oct-2019 14:23:15 b8c5d7f817e8: Waiting build 14-Oct-2019 14:23:15 9acfe225486b: Waiting build 14-Oct-2019 14:23:15 90109bbe5b76: Waiting build 14-Oct-2019 14:23:15 cb81b9d8a6c9: Waiting build 14-Oct-2019 14:23:15 ea69392465ad: Waiting build 14-Oct-2019 14:23:16 c808cf8c9ef8: Mounted from clowder/extractors-geoshp-preview build 14-Oct-2019 14:23:17 d8136157e163: Mounted from clowder/extractors-geoshp-preview build 14-Oct-2019 14:23:17 5f25474732fa: Mounted from clowder/extractors-geoshp-preview build 14-Oct-2019 14:23:18 c946bc60bdc9: Pushed build 14-Oct-2019 14:23:18 03d26a86cc3e: Mounted from clowder/extractors-geoshp-preview build 14-Oct-2019 14:23:18 654147fae9a1: Pushed build 14-Oct-2019 14:23:18 f1c0e1d76ba7: Mounted from clowder/extractors-geoshp-preview build 14-Oct-2019 14:23:19 9acfe225486b: Layer already exists build 14-Oct-2019 14:23:19 90109bbe5b76: Layer already exists build 14-Oct-2019 14:23:19 cb81b9d8a6c9: Layer already exists build 14-Oct-2019 14:23:19 b8c5d7f817e8: Mounted from clowder/extractors-geoshp-preview build 14-Oct-2019 14:23:19 ea69392465ad: Layer already exists build 14-Oct-2019 14:23:33 a378081eccd9: Pushed build 14-Oct-2019 14:23:36 latest: digest: sha256:a568a63c4a50e2e8d591151f7721fb4a492ca4c0e46ec253b4c9d0857b40f5d5 size: 3032 build 14-Oct-2019 14:23:36 Untagged: clowder/extractors-pycsw:latest build 14-Oct-2019 14:23:36 Untagged: clowder/extractors-pycsw@sha256:a568a63c4a50e2e8d591151f7721fb4a492ca4c0e46ec253b4c9d0857b40f5d5 build 14-Oct-2019 14:23:36 Untagged: 21384:latest build 14-Oct-2019 14:23:36 Deleted: sha256:3a5a17a79bd992365c9c828c795673c6daee11d60b07878c9145f21eef2fcab2 build 14-Oct-2019 14:23:36 Deleted: sha256:b36f0de08c887ad0d3c5c22539f97a99e49792ce7fbec66e5affc693cf5a3825 build 14-Oct-2019 14:23:36 Deleted: sha256:450176d904b892c0c3de2ffadd43be4be6ee9b9bc7e40b35b4ce0d8770420216 build 14-Oct-2019 14:23:36 Deleted: sha256:ee7653570c914aafd9eb4ce287a8380f2819740fa5c4b07b36ed07826f4e09bc build 14-Oct-2019 14:23:36 Deleted: sha256:98e668934378272f7ccfa0c4735daed33622a2727914c2feb1fa4b3530626f35 build 14-Oct-2019 14:23:36 Deleted: sha256:701015982b456c68bce76c0638f2933858572929fc5ec39965df0d3a91e57922 build 14-Oct-2019 14:23:36 Deleted: sha256:81956dcc1972f972c251cabb6351aa1050df2d614c1bae149e93b2ab99c3be66 build 14-Oct-2019 14:23:36 Deleted: sha256:e5fe0cadd99edc96608b464a1ea7e81fdf8579625dea80a08b8b021f59866b04 build 14-Oct-2019 14:23:36 Deleted: sha256:a2dd7fd87bfc7026d5b25f188921857d0137c4e1781aab6ceaa351575c1519ca build 14-Oct-2019 14:23:36 Deleted: sha256:de824e2a1f71762fa61784a62a63f74ae9d7cd983f9c8402f4ae0fea89e00548 build 14-Oct-2019 14:23:36 Sending build context to Docker daemon 3.584kB build 14-Oct-2019 14:23:36 build 14-Oct-2019 14:23:36 Step 1/10 : FROM openjdk:8-jre build 14-Oct-2019 14:23:37 8-jre: Pulling from library/openjdk build 14-Oct-2019 14:23:37 092586df9206: Pulling fs layer build 14-Oct-2019 14:23:37 ef599477fae0: Pulling fs layer build 14-Oct-2019 14:23:37 4530c6472b5d: Pulling fs layer build 14-Oct-2019 14:23:37 f68761487d74: Pulling fs layer build 14-Oct-2019 14:23:37 44e59d0ee089: Pulling fs layer build 14-Oct-2019 14:23:37 81c7d41ff281: Pulling fs layer build 14-Oct-2019 14:23:37 f68761487d74: Waiting build 14-Oct-2019 14:23:37 44e59d0ee089: Waiting build 14-Oct-2019 14:23:37 81c7d41ff281: Waiting build 14-Oct-2019 14:23:37 4530c6472b5d: Verifying Checksum build 14-Oct-2019 14:23:37 4530c6472b5d: Download complete build 14-Oct-2019 14:23:37 ef599477fae0: Verifying Checksum build 14-Oct-2019 14:23:37 ef599477fae0: Download complete build 14-Oct-2019 14:23:38 44e59d0ee089: Verifying Checksum build 14-Oct-2019 14:23:38 44e59d0ee089: Download complete build 14-Oct-2019 14:23:38 f68761487d74: Verifying Checksum build 14-Oct-2019 14:23:38 f68761487d74: Download complete build 14-Oct-2019 14:23:38 092586df9206: Verifying Checksum build 14-Oct-2019 14:23:38 092586df9206: Download complete build 14-Oct-2019 14:23:39 81c7d41ff281: Verifying Checksum build 14-Oct-2019 14:23:39 81c7d41ff281: Download complete build 14-Oct-2019 14:23:40 092586df9206: Pull complete build 14-Oct-2019 14:23:42 ef599477fae0: Pull complete build 14-Oct-2019 14:23:43 4530c6472b5d: Pull complete build 14-Oct-2019 14:23:44 f68761487d74: Pull complete build 14-Oct-2019 14:23:45 44e59d0ee089: Pull complete build 14-Oct-2019 14:23:46 81c7d41ff281: Pull complete build 14-Oct-2019 14:23:47 Digest: sha256:6a83f99dbc99e989a2248f5bc3b2adc724c864e159748002644e5e9296a45c0c build 14-Oct-2019 14:23:47 Status: Downloaded newer image for openjdk:8-jre build 14-Oct-2019 14:23:47 ---> fd62519d2906 build 14-Oct-2019 14:23:47 Step 2/10 : MAINTAINER Yong Wook Kim build 14-Oct-2019 14:23:47 ---> Running in 364a8e9caca7 build 14-Oct-2019 14:23:48 Removing intermediate container 364a8e9caca7 build 14-Oct-2019 14:23:48 ---> 677776cbb7e4 build 14-Oct-2019 14:23:48 Step 3/10 : ARG GEOSERVER_VERSION=2.14.2 build 14-Oct-2019 14:23:49 ---> Running in 8164c6b741bb build 14-Oct-2019 14:23:50 Removing intermediate container 8164c6b741bb build 14-Oct-2019 14:23:50 ---> b9f510a5ac7e build 14-Oct-2019 14:23:50 Step 4/10 : ENV GEOSERVER_PORT=8080 GEOSERVER_HOME=/usr/share/geoserver GEOSERVER_DATA_DIR=/data_dir GEOSERVER_VERSION=${GEOSERVER_VERSION} build 14-Oct-2019 14:23:50 ---> Running in 88fc0f81af50 build 14-Oct-2019 14:23:51 Removing intermediate container 88fc0f81af50 build 14-Oct-2019 14:23:51 ---> 9bc8757fa473 build 14-Oct-2019 14:23:51 Step 5/10 : VOLUME /data build 14-Oct-2019 14:23:52 ---> Running in 16c7dbde9083 build 14-Oct-2019 14:23:54 Removing intermediate container 16c7dbde9083 build 14-Oct-2019 14:23:54 ---> 312456fcc5a2 build 14-Oct-2019 14:23:54 Step 6/10 : EXPOSE 8080 build 14-Oct-2019 14:23:54 ---> Running in 6bcd6b772a38 build 14-Oct-2019 14:23:56 Removing intermediate container 6bcd6b772a38 build 14-Oct-2019 14:23:56 ---> 71b9e12de40b build 14-Oct-2019 14:23:56 Step 7/10 : RUN wget --quiet http://sourceforge.net/projects/geoserver/files/GeoServer/${GEOSERVER_VERSION}/geoserver-${GEOSERVER_VERSION}-bin.zip && unzip -q geoserver-${GEOSERVER_VERSION}-bin.zip && rm geoserver-${GEOSERVER_VERSION}-bin.zip && mv geoserver-${GEOSERVER_VERSION} /usr/share/geoserver && chown -R root /usr/share/geoserver/ && mv /usr/share/geoserver/data_dir /data_dir build 14-Oct-2019 14:23:56 ---> Running in 7218dc7a7e01 build 14-Oct-2019 14:25:36 Removing intermediate container 7218dc7a7e01 build 14-Oct-2019 14:25:36 ---> c55c72cd75ea build 14-Oct-2019 14:25:36 Step 8/10 : RUN wget --quiet http://sourceforge.net/projects/geoserver/files/GeoServer/${GEOSERVER_VERSION}/extensions/geoserver-${GEOSERVER_VERSION}-csw-plugin.zip && unzip -q geoserver-${GEOSERVER_VERSION}-csw-plugin.zip && mv *.jar /usr/share/geoserver/webapps/geoserver/WEB-INF/lib/. && rm geoserver-${GEOSERVER_VERSION}-csw-plugin.zip build 14-Oct-2019 14:25:36 ---> Running in b32080620e7c build 14-Oct-2019 14:25:42 Removing intermediate container b32080620e7c build 14-Oct-2019 14:25:42 ---> 9c1850c3278b build 14-Oct-2019 14:25:42 Step 9/10 : RUN wget --quiet http://central.maven.org/maven2/org/eclipse/jetty/jetty-servlets/9.2.13.v20150730/jetty-servlets-9.2.13.v20150730.jar && mv *.jar /usr/share/geoserver/webapps/geoserver/WEB-INF/lib/. && sed -i "s|||g" /usr/share/geoserver/webapps/geoserver/WEB-INF/web.xml && sed -i "s|||g" /usr/share/geoserver/webapps/geoserver/WEB-INF/web.xml build 14-Oct-2019 14:25:42 ---> Running in cfde8251faf7 build 14-Oct-2019 14:25:46 Removing intermediate container cfde8251faf7 build 14-Oct-2019 14:25:46 ---> 02339d37fa5a build 14-Oct-2019 14:25:46 Step 10/10 : CMD /usr/share/geoserver/bin/startup.sh build 14-Oct-2019 14:25:47 ---> Running in 8bd92bed0efe build 14-Oct-2019 14:25:48 Removing intermediate container 8bd92bed0efe build 14-Oct-2019 14:25:48 ---> 63aadfd17a09 build 14-Oct-2019 14:25:48 Successfully built 63aadfd17a09 build 14-Oct-2019 14:25:48 Successfully tagged 21384:latest build 14-Oct-2019 14:25:49 The push refers to repository [docker.io/clowder/geoserver] build 14-Oct-2019 14:25:49 8ea15814fe22: Preparing build 14-Oct-2019 14:25:49 a44e1afce447: Preparing build 14-Oct-2019 14:25:49 b255648daeba: Preparing build 14-Oct-2019 14:25:49 b690201c509b: Preparing build 14-Oct-2019 14:25:49 6a00eae1d01d: Preparing build 14-Oct-2019 14:25:49 cb5d7b073fde: Preparing build 14-Oct-2019 14:25:49 8bacec4e3446: Preparing build 14-Oct-2019 14:25:49 26b1991f37bd: Preparing build 14-Oct-2019 14:25:49 55e6b89812f3: Preparing build 14-Oct-2019 14:25:49 cb5d7b073fde: Waiting build 14-Oct-2019 14:25:49 26b1991f37bd: Waiting build 14-Oct-2019 14:25:49 55e6b89812f3: Waiting build 14-Oct-2019 14:25:49 8bacec4e3446: Waiting build 14-Oct-2019 14:25:49 b690201c509b: Layer already exists build 14-Oct-2019 14:25:50 6a00eae1d01d: Layer already exists build 14-Oct-2019 14:25:50 cb5d7b073fde: Layer already exists build 14-Oct-2019 14:25:50 8bacec4e3446: Layer already exists build 14-Oct-2019 14:25:50 26b1991f37bd: Layer already exists build 14-Oct-2019 14:25:50 55e6b89812f3: Layer already exists build 14-Oct-2019 14:25:51 8ea15814fe22: Pushed build 14-Oct-2019 14:25:51 a44e1afce447: Pushed build 14-Oct-2019 14:25:59 b255648daeba: Pushed build 14-Oct-2019 14:26:01 latest: digest: sha256:0a60c2f86ec19a51bfa4410b38a5f4715e6f15c2c88c1f4c1ea3ca328390e7b4 size: 2216 build 14-Oct-2019 14:26:01 Untagged: clowder/geoserver:latest build 14-Oct-2019 14:26:01 Untagged: clowder/geoserver@sha256:0a60c2f86ec19a51bfa4410b38a5f4715e6f15c2c88c1f4c1ea3ca328390e7b4 build 14-Oct-2019 14:26:01 Untagged: 21384:latest build 14-Oct-2019 14:26:01 Deleted: sha256:63aadfd17a096fd2698e361562d0bf970b63d972450135b19a320296f89085d1 build 14-Oct-2019 14:26:01 Deleted: sha256:02339d37fa5a34b230e25d5275969b154f5f48b62bb284a1a4c2fcec62fbcd29 build 14-Oct-2019 14:26:01 Deleted: sha256:4fcc599e5d2d0b42172164d97b0a7c508fb5fc93dc7b6441be96fb0103d8dc90 build 14-Oct-2019 14:26:01 Deleted: sha256:9c1850c3278b775b0d028de11cf4fd5d4426d07caf9542a12dc881b26446543d build 14-Oct-2019 14:26:01 Deleted: sha256:c3d1a0a8b7b94834e28abe5988374c97d5d5a5ddbbb5d9de073d7915aefea346 build 14-Oct-2019 14:26:01 Deleted: sha256:c55c72cd75ea1f719626a9647812a0f37585c538452551833adc54ed6173e7a1 build 14-Oct-2019 14:26:01 Deleted: sha256:ee0f9b15931d948fe026f5b65ce14fbaf69ba208182d2d0522c7d263c98504c4 build 14-Oct-2019 14:26:01 Deleted: sha256:71b9e12de40b4736931fded3f4226877099cb5dc21265beeb2164766eafeb346 build 14-Oct-2019 14:26:01 Deleted: sha256:312456fcc5a240a83cbf22ba70d1fa1e5e495edc2db019191805c136f3a1e4b4 build 14-Oct-2019 14:26:01 Deleted: sha256:9bc8757fa473c622f76cf69de59e41b43019670eb7a8d8fabf956e48ea083007 build 14-Oct-2019 14:26:01 Deleted: sha256:b9f510a5ac7e6ad56c89861a6c35f6958e33357298d51c0cbc3e3f08adfeab02 build 14-Oct-2019 14:26:01 Deleted: sha256:677776cbb7e47c2b2c4c4235c717d4aea4d49b170f51ce8675ad13f195dae2c2 build 14-Oct-2019 14:26:01 Sending build context to Docker daemon 9.216kB build 14-Oct-2019 14:26:01 build 14-Oct-2019 14:26:01 Step 1/7 : FROM geopython/pycsw build 14-Oct-2019 14:26:02 latest: Pulling from geopython/pycsw build 14-Oct-2019 14:26:02 c1e54eec4b57: Pulling fs layer build 14-Oct-2019 14:26:02 7db076a8ac47: Pulling fs layer build 14-Oct-2019 14:26:02 7b816f02eea3: Pulling fs layer build 14-Oct-2019 14:26:02 e2d056f20316: Pulling fs layer build 14-Oct-2019 14:26:02 47f660338ad5: Pulling fs layer build 14-Oct-2019 14:26:02 ebcf65e3db62: Pulling fs layer build 14-Oct-2019 14:26:02 e2d056f20316: Waiting build 14-Oct-2019 14:26:02 47f660338ad5: Waiting build 14-Oct-2019 14:26:02 74461b1e60f6: Pulling fs layer build 14-Oct-2019 14:26:02 2ab9670f06b9: Pulling fs layer build 14-Oct-2019 14:26:02 c27673160012: Pulling fs layer build 14-Oct-2019 14:26:02 ebcf65e3db62: Waiting build 14-Oct-2019 14:26:02 74461b1e60f6: Waiting build 14-Oct-2019 14:26:02 2ab9670f06b9: Waiting build 14-Oct-2019 14:26:02 c4a4cded5244: Pulling fs layer build 14-Oct-2019 14:26:02 4dbd49f43a6a: Pulling fs layer build 14-Oct-2019 14:26:02 bca102304a79: Pulling fs layer build 14-Oct-2019 14:26:02 3bdbbd06c89b: Pulling fs layer build 14-Oct-2019 14:26:02 d0abcd48a009: Pulling fs layer build 14-Oct-2019 14:26:02 a166dcc919c7: Pulling fs layer build 14-Oct-2019 14:26:02 c27673160012: Waiting build 14-Oct-2019 14:26:02 c4a4cded5244: Waiting build 14-Oct-2019 14:26:02 3bdbbd06c89b: Waiting build 14-Oct-2019 14:26:02 4dbd49f43a6a: Waiting build 14-Oct-2019 14:26:02 d0abcd48a009: Waiting build 14-Oct-2019 14:26:02 bca102304a79: Waiting build 14-Oct-2019 14:26:02 6c802702aaed: Pulling fs layer build 14-Oct-2019 14:26:02 a166dcc919c7: Waiting build 14-Oct-2019 14:26:02 6c802702aaed: Waiting build 14-Oct-2019 14:26:02 c1e54eec4b57: Verifying Checksum build 14-Oct-2019 14:26:02 c1e54eec4b57: Download complete build 14-Oct-2019 14:26:02 7b816f02eea3: Verifying Checksum build 14-Oct-2019 14:26:02 7b816f02eea3: Download complete build 14-Oct-2019 14:26:02 e2d056f20316: Verifying Checksum build 14-Oct-2019 14:26:02 e2d056f20316: Download complete build 14-Oct-2019 14:26:03 c1e54eec4b57: Pull complete build 14-Oct-2019 14:26:03 47f660338ad5: Verifying Checksum build 14-Oct-2019 14:26:03 47f660338ad5: Download complete build 14-Oct-2019 14:26:03 74461b1e60f6: Verifying Checksum build 14-Oct-2019 14:26:03 74461b1e60f6: Download complete build 14-Oct-2019 14:26:03 2ab9670f06b9: Download complete build 14-Oct-2019 14:26:04 ebcf65e3db62: Verifying Checksum build 14-Oct-2019 14:26:04 ebcf65e3db62: Download complete build 14-Oct-2019 14:26:04 c27673160012: Verifying Checksum build 14-Oct-2019 14:26:04 c27673160012: Download complete build 14-Oct-2019 14:26:04 4dbd49f43a6a: Verifying Checksum build 14-Oct-2019 14:26:04 4dbd49f43a6a: Download complete build 14-Oct-2019 14:26:05 7db076a8ac47: Verifying Checksum build 14-Oct-2019 14:26:05 7db076a8ac47: Download complete build 14-Oct-2019 14:26:05 bca102304a79: Verifying Checksum build 14-Oct-2019 14:26:05 bca102304a79: Download complete build 14-Oct-2019 14:26:05 c4a4cded5244: Download complete build 14-Oct-2019 14:26:05 3bdbbd06c89b: Verifying Checksum build 14-Oct-2019 14:26:05 3bdbbd06c89b: Download complete build 14-Oct-2019 14:26:05 d0abcd48a009: Verifying Checksum build 14-Oct-2019 14:26:05 d0abcd48a009: Download complete build 14-Oct-2019 14:26:05 6c802702aaed: Verifying Checksum build 14-Oct-2019 14:26:05 6c802702aaed: Download complete build 14-Oct-2019 14:26:10 7db076a8ac47: Pull complete build 14-Oct-2019 14:26:11 7b816f02eea3: Pull complete build 14-Oct-2019 14:26:11 e2d056f20316: Pull complete build 14-Oct-2019 14:26:13 47f660338ad5: Pull complete build 14-Oct-2019 14:26:15 ebcf65e3db62: Pull complete build 14-Oct-2019 14:26:16 74461b1e60f6: Pull complete build 14-Oct-2019 14:26:16 2ab9670f06b9: Pull complete build 14-Oct-2019 14:26:17 c27673160012: Pull complete build 14-Oct-2019 14:26:17 c4a4cded5244: Pull complete build 14-Oct-2019 14:26:18 4dbd49f43a6a: Pull complete build 14-Oct-2019 14:26:18 bca102304a79: Pull complete build 14-Oct-2019 14:26:19 3bdbbd06c89b: Pull complete build 14-Oct-2019 14:26:20 d0abcd48a009: Pull complete build 14-Oct-2019 14:26:21 a166dcc919c7: Pull complete build 14-Oct-2019 14:26:22 6c802702aaed: Pull complete build 14-Oct-2019 14:26:23 Digest: sha256:f2d57d2841352ec039dcfddea0a2457814c7f97660a6433f132a7d29132cb584 build 14-Oct-2019 14:26:23 Status: Downloaded newer image for geopython/pycsw:latest build 14-Oct-2019 14:26:23 ---> b8ab089d4596 build 14-Oct-2019 14:26:23 Step 2/7 : ENV PYCSW_CONFIG=/etc/pycsw/pycsw.cfg build 14-Oct-2019 14:26:23 ---> Running in f0d88fa8457c build 14-Oct-2019 14:26:25 Removing intermediate container f0d88fa8457c build 14-Oct-2019 14:26:25 ---> 7fcf07622329 build 14-Oct-2019 14:26:25 Step 3/7 : COPY entrypoint.py /usr/local/bin/entrypoint.py build 14-Oct-2019 14:26:26 ---> 8019cd61b0df build 14-Oct-2019 14:26:26 Step 4/7 : WORKDIR /home/pycsw build 14-Oct-2019 14:26:26 ---> Running in 917c2d47327b build 14-Oct-2019 14:26:27 Removing intermediate container 917c2d47327b build 14-Oct-2019 14:26:27 ---> 171c23c2f65a build 14-Oct-2019 14:26:27 Step 5/7 : USER pycsw build 14-Oct-2019 14:26:28 ---> Running in 94eaa2b52d60 build 14-Oct-2019 14:26:29 Removing intermediate container 94eaa2b52d60 build 14-Oct-2019 14:26:29 ---> 196bb77d69df build 14-Oct-2019 14:26:29 Step 6/7 : EXPOSE 8082 build 14-Oct-2019 14:26:30 ---> Running in 6e84193a2a5c build 14-Oct-2019 14:26:31 Removing intermediate container 6e84193a2a5c build 14-Oct-2019 14:26:31 ---> 81b5fd6195e6 build 14-Oct-2019 14:26:31 Step 7/7 : ENTRYPOINT [ "python3", "/usr/local/bin/entrypoint.py" ] build 14-Oct-2019 14:26:32 ---> Running in 07a05fa836c0 build 14-Oct-2019 14:26:33 Removing intermediate container 07a05fa836c0 build 14-Oct-2019 14:26:33 ---> 9cd51bf0e040 build 14-Oct-2019 14:26:33 Successfully built 9cd51bf0e040 build 14-Oct-2019 14:26:33 Successfully tagged 21384:latest build 14-Oct-2019 14:26:33 The push refers to repository [docker.io/clowder/pycsw] build 14-Oct-2019 14:26:33 ffeeba428165: Preparing build 14-Oct-2019 14:26:33 bde0636e980a: Preparing build 14-Oct-2019 14:26:33 13d53d3428d2: Preparing build 14-Oct-2019 14:26:33 75e3e3aacef5: Preparing build 14-Oct-2019 14:26:33 e3ce39a7f224: Preparing build 14-Oct-2019 14:26:33 74ad212a56d2: Preparing build 14-Oct-2019 14:26:33 19e1b21a313a: Preparing build 14-Oct-2019 14:26:33 37dc46dc63a3: Preparing build 14-Oct-2019 14:26:33 05d9cb9cfc1f: Preparing build 14-Oct-2019 14:26:33 39764b297a6f: Preparing build 14-Oct-2019 14:26:33 7033033b662b: Preparing build 14-Oct-2019 14:26:33 011622192fbe: Preparing build 14-Oct-2019 14:26:33 e15f4b80680e: Preparing build 14-Oct-2019 14:26:33 e1b6f2e83996: Preparing build 14-Oct-2019 14:26:33 cc4edf8b5dbb: Preparing build 14-Oct-2019 14:26:33 51521fd8f0ae: Preparing build 14-Oct-2019 14:26:33 23f7bd114e4a: Preparing build 14-Oct-2019 14:26:33 74ad212a56d2: Waiting build 14-Oct-2019 14:26:33 19e1b21a313a: Waiting build 14-Oct-2019 14:26:33 37dc46dc63a3: Waiting build 14-Oct-2019 14:26:33 05d9cb9cfc1f: Waiting build 14-Oct-2019 14:26:33 39764b297a6f: Waiting build 14-Oct-2019 14:26:33 7033033b662b: Waiting build 14-Oct-2019 14:26:33 011622192fbe: Waiting build 14-Oct-2019 14:26:33 e15f4b80680e: Waiting build 14-Oct-2019 14:26:33 e1b6f2e83996: Waiting build 14-Oct-2019 14:26:33 cc4edf8b5dbb: Waiting build 14-Oct-2019 14:26:33 51521fd8f0ae: Waiting build 14-Oct-2019 14:26:33 23f7bd114e4a: Waiting build 14-Oct-2019 14:26:34 13d53d3428d2: Layer already exists build 14-Oct-2019 14:26:34 e3ce39a7f224: Layer already exists build 14-Oct-2019 14:26:34 75e3e3aacef5: Layer already exists build 14-Oct-2019 14:26:34 bde0636e980a: Layer already exists build 14-Oct-2019 14:26:34 19e1b21a313a: Layer already exists build 14-Oct-2019 14:26:34 74ad212a56d2: Layer already exists build 14-Oct-2019 14:26:34 37dc46dc63a3: Layer already exists build 14-Oct-2019 14:26:34 05d9cb9cfc1f: Layer already exists build 14-Oct-2019 14:26:34 39764b297a6f: Layer already exists build 14-Oct-2019 14:26:34 011622192fbe: Layer already exists build 14-Oct-2019 14:26:34 e15f4b80680e: Layer already exists build 14-Oct-2019 14:26:34 7033033b662b: Layer already exists build 14-Oct-2019 14:26:34 e1b6f2e83996: Layer already exists build 14-Oct-2019 14:26:34 cc4edf8b5dbb: Layer already exists build 14-Oct-2019 14:26:34 23f7bd114e4a: Layer already exists build 14-Oct-2019 14:26:34 51521fd8f0ae: Layer already exists build 14-Oct-2019 14:26:35 ffeeba428165: Pushed build 14-Oct-2019 14:26:37 latest: digest: sha256:50233f5dd82e8427242709c6cbb4b66803bbadd0ed26ab499bed4ce8d888589b size: 3867 build 14-Oct-2019 14:26:38 Untagged: clowder/pycsw:latest build 14-Oct-2019 14:26:38 Untagged: clowder/pycsw@sha256:50233f5dd82e8427242709c6cbb4b66803bbadd0ed26ab499bed4ce8d888589b build 14-Oct-2019 14:26:38 Untagged: 21384:latest build 14-Oct-2019 14:26:38 Deleted: sha256:9cd51bf0e040445a02377a566eda549deface5f899bfd0f116975b360ea2e5a1 build 14-Oct-2019 14:26:38 Deleted: sha256:81b5fd6195e641577596b7a98e9324257719093dc9bf869b6d7e7dc353300b57 build 14-Oct-2019 14:26:38 Deleted: sha256:196bb77d69dff2cd157040ed832f6608557009fe040196139683f58f126a8671 build 14-Oct-2019 14:26:38 Deleted: sha256:171c23c2f65a549d2a643d8ee11795ef48268e359e82ae477c9013d4fac0362b build 14-Oct-2019 14:26:38 Deleted: sha256:8019cd61b0dfbde41919c1716df544e6f7d5512fc2f1f6b203f5ee2f8769356c build 14-Oct-2019 14:26:38 Deleted: sha256:ef22dc94a7dcc56dd51fb6076890e22742ec5fb651920091879da821c7d06f1d build 14-Oct-2019 14:26:38 Deleted: sha256:7fcf076223292cf4f360f9719572dc2b822eec4b9a49f8c3486f38980ffac844 simple 14-Oct-2019 14:26:38 Finished task 'docker build' with result: Success simple 14-Oct-2019 14:26:38 Running post build plugin 'Docker Container Cleanup' simple 14-Oct-2019 14:26:38 Running post build plugin 'NCover Results Collector' simple 14-Oct-2019 14:26:38 Running post build plugin 'Clover Results Collector' simple 14-Oct-2019 14:26:38 Running post build plugin 'npm Cache Cleanup' simple 14-Oct-2019 14:26:38 Running post build plugin 'Artifact Copier' simple 14-Oct-2019 14:26:38 Finalising the build... simple 14-Oct-2019 14:26:38 Stopping timer. simple 14-Oct-2019 14:26:38 Build CATS-EXGEO-JOB1-54 completed. simple 14-Oct-2019 14:26:38 Running on server: post build plugin 'NCover Results Collector' simple 14-Oct-2019 14:26:38 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 14-Oct-2019 14:26:38 Running on server: post build plugin 'Clover Delta Calculator' simple 14-Oct-2019 14:26:38 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 14-Oct-2019 14:26:38 All post build plugins have finished simple 14-Oct-2019 14:26:38 Generating build results summary... simple 14-Oct-2019 14:26:38 Saving build results to disk... simple 14-Oct-2019 14:26:38 Logging substituted variables... simple 14-Oct-2019 14:26:38 Indexing build results... simple 14-Oct-2019 14:26:38 Finished building CATS-EXGEO-JOB1-54.