simple 09-Jul-2018 11:49:52 Build Clowder - extractors-geo - SYN-167-temporary-deactivate-proxy-post - Default Job #2 (CATS-EXGEO11-JOB1-2) started building on agent buildserver-1.os.ncsa.edu simple 09-Jul-2018 11:49:52 Remote agent on host buildserver-1.os.ncsa.edu simple 09-Jul-2018 11:49:52 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO11-JOB1 simple 09-Jul-2018 11:49:52 Executing build Clowder - extractors-geo - SYN-167-temporary-deactivate-proxy-post - Default Job #2 (CATS-EXGEO11-JOB1-2) simple 09-Jul-2018 11:49:52 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 09-Jul-2018 11:49:52 Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO11-JOB1 simple 09-Jul-2018 11:49:52 Updating source code to revision: 5debaac8c2aa09f6ba6498f6635db854f580707a simple 09-Jul-2018 11:49:52 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO11-JOB1/.git'. simple 09-Jul-2018 11:49:52 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO11-JOB1/.git/ simple 09-Jul-2018 11:49:52 Fetching 'refs/heads/SYN-167-temporary-deactivate-proxy-post' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git'. Will try to do a shallow fetch. simple 09-Jul-2018 11:49:52 Warning: Permanently added '[127.0.0.1]:35350' (RSA) to the list of known hosts. simple 09-Jul-2018 11:49:53 From ssh://127.0.0.1:35350/cats/extractors-geo simple 09-Jul-2018 11:49:53 * [new branch] SYN-167-temporary-deactivate-proxy-post -> SYN-167-temporary-deactivate-proxy-post simple 09-Jul-2018 11:49:53 Checking out revision 5debaac8c2aa09f6ba6498f6635db854f580707a. simple 09-Jul-2018 11:49:53 Switched to branch 'SYN-167-temporary-deactivate-proxy-post' simple 09-Jul-2018 11:49:53 Updated source code to revision: 5debaac8c2aa09f6ba6498f6635db854f580707a simple 09-Jul-2018 11:49:53 Finished task 'Checkout Default Repository' with result: Success simple 09-Jul-2018 11:49:53 Running pre-build action: VCS Version Collector simple 09-Jul-2018 11:49:53 Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 09-Jul-2018 11:49:53 Beginning to execute external process for build 'Clowder - extractors-geo - SYN-167-temporary-deactivate-proxy-post - Default Job #2 (CATS-EXGEO11-JOB1-2)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO11-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=SYN-167-temporary-deactivate-proxy-post\nbamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm\nbamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster\nbamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node\nbamboo_repository_161939463_previous_revision_number=92bdc1f6a078370b37b60f034928ec27169faf11\nbamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster\nbamboo_planRepository_1_branchDisplayName=SYN-167-temporary-deactivate-proxy-post\nbamboo_repository_revision_number=5debaac8c2aa09f6ba6498f6635db854f580707a\nbamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-EXGEO11-JOB1-2\nbamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build\nbamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO11-JOB1\nbamboo_planRepository_1_name=extractors-geo\nbamboo_buildKey=CATS-EXGEO11-JOB1\nbamboo_repository_161939463_git_branch=SYN-167-temporary-deactivate-proxy-post\nbamboo_capability_system_os=linux\nbamboo_shortPlanName=SYN-167-temporary-deactivate-proxy-post\nbamboo_repository_161939463_git_username=\nbamboo_planRepository_name=extractors-geo\nbamboo_buildNumber=2\nbamboo_shortJobName=Default Job\nbamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-EXGEO11-JOB1-2\nbamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git\nbamboo_agentId=140673027\nbamboo_planName=Clowder - extractors-geo - 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Default Job\nbamboo_planRepository_1_revision=5debaac8c2aa09f6ba6498f6635db854f580707a\nbamboo_capability_system_builder_command_python3=/usr/bin/python3\nbamboo_repository_name=extractors-geo\nbamboo_buildFailed=false\nbamboo_repository_161939463_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git\nbamboo_capability_system_docker_executable=/usr/bin/docker\nbamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt\nbamboo_repository_161939463_branch_name=SYN-167-temporary-deactivate-proxy-post\nbamboo_planRepository_branch=SYN-167-temporary-deactivate-proxy-post\nbamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/usr/bin/git\nbamboo_repository_git_username=\nbamboo_planRepository_1_previousRevision=92bdc1f6a078370b37b60f034928ec27169faf11\nbamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13\nbamboo_planRepository_branchDisplayName=SYN-167-temporary-deactivate-proxy-post\nbamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs\nbamboo_planRepository_1_type=bbserver\nbamboo_planRepository_branchName=SYN-167-temporary-deactivate-proxy-post\nbamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7\nbamboo_capability_system_hostname=buildserver-1\nbamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_software_mongo=/usr/bin/mongo\nbamboo_plan_storageTag=plan-161742861\nbamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs\nbamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl\nbamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=bbserver\nbamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache\nbamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git\nbamboo_repository_161939463_name=extractors-geo\nbamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node\nbamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4\nbamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9\nbamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp\nbamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO11-JOB1\nbamboo_planKey=CATS-EXGEO11\nbamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git\nbamboo_planRepository_username=\nbamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41\nbamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh\nbamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60\nbamboo_repository_161939463_revision_number=5debaac8c2aa09f6ba6498f6635db854f580707a\nbamboo_planRepository_1_branchName=SYN-167-temporary-deactivate-proxy-post\n build 09-Jul-2018 11:49:53 Sending build context to Docker daemon 1.324MB build 09-Jul-2018 11:49:53 build 09-Jul-2018 11:49:53 Step 1/8 : FROM clowder/pyclowder:2 build 09-Jul-2018 11:49:53 ---> b93e3777165c build 09-Jul-2018 11:49:53 Step 2/8 : MAINTAINER Yong Wook Kim build 09-Jul-2018 11:49:53 ---> Running in edf679e8e7a1 build 09-Jul-2018 11:49:55 Removing intermediate container edf679e8e7a1 build 09-Jul-2018 11:49:55 ---> ace05c4ca0f2 build 09-Jul-2018 11:49:55 Step 3/8 : COPY requirements.txt /home/clowder/ build 09-Jul-2018 11:49:55 ---> ec220bdaaa96 build 09-Jul-2018 11:49:55 Step 4/8 : RUN apt-get update && apt-get -y install python-dev python-pip python-dev build-essential python-numpy gdal-bin python-gdal python-scipy software-properties-common && apt-add-repository ppa:ubuntugis/ppa && pip install --upgrade pip==9.0.3 && pip install -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 09-Jul-2018 11:49:55 ---> Running in 1be86b17c39e build 09-Jul-2018 11:49:57 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 09-Jul-2018 11:49:57 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 09-Jul-2018 11:49:57 Get:3 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 09-Jul-2018 11:49:57 Get:4 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [83.5 kB] build 09-Jul-2018 11:49:57 Get:5 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 09-Jul-2018 11:49:57 Get:6 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [660 kB] build 09-Jul-2018 11:49:57 Get:7 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 09-Jul-2018 11:49:58 Get:8 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 09-Jul-2018 11:49:58 Get:9 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [452 kB] build 09-Jul-2018 11:49:58 Get:10 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3735 B] build 09-Jul-2018 11:49:58 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 09-Jul-2018 11:49:58 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 09-Jul-2018 11:49:58 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 09-Jul-2018 11:49:58 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 09-Jul-2018 11:49:58 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [260 kB] build 09-Jul-2018 11:49:58 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1038 kB] build 09-Jul-2018 11:49:58 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 09-Jul-2018 11:49:58 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [825 kB] build 09-Jul-2018 11:49:58 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 09-Jul-2018 11:49:58 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7321 B] build 09-Jul-2018 11:49:58 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8088 B] build 09-Jul-2018 11:50:01 Fetched 25.3 MB in 4s (5377 kB/s) build 09-Jul-2018 11:50:02 Reading package lists... build 09-Jul-2018 11:50:04 Reading package lists... build 09-Jul-2018 11:50:04 Building dependency tree... build 09-Jul-2018 11:50:04 Reading state information... build 09-Jul-2018 11:50:04 python-pip is already the newest version (8.1.1-2ubuntu0.4). build 09-Jul-2018 11:50:04 The following additional packages will be installed: build 09-Jul-2018 11:50:04 apt apt-utils binutils bzip2 cpp cpp-5 cron dbus dh-python distro-info-data build 09-Jul-2018 11:50:04 dpkg-dev fakeroot fontconfig-config fonts-dejavu-core g++ g++-5 gcc gcc-5 build 09-Jul-2018 11:50:04 gcc-5-base gir1.2-glib-2.0 ifupdown iproute2 isc-dhcp-client isc-dhcp-common build 09-Jul-2018 11:50:04 iso-codes krb5-locales libaec0 libalgorithm-diff-perl build 09-Jul-2018 11:50:04 libalgorithm-diff-xs-perl libalgorithm-merge-perl libapt-inst2.0 build 09-Jul-2018 11:50:04 libapt-pkg5.0 libarmadillo6 libarpack2 libasan2 libasn1-8-heimdal libatm1 build 09-Jul-2018 11:50:04 libatomic1 libblas-common libblas3 libc-dev-bin libc6-dev libcap-ng0 build 09-Jul-2018 11:50:04 libcc1-0 libcilkrts5 libcurl3-gnutls libdap17v5 libdapclient6v5 libdbus-1-3 build 09-Jul-2018 11:50:04 libdbus-glib-1-2 libdns-export162 libdpkg-perl libepsilon1 libexpat1-dev build 09-Jul-2018 11:50:04 libfakeroot libfile-fcntllock-perl libfontconfig1 libfreetype6 libfreexl1 build 09-Jul-2018 11:50:04 libgcc-5-dev libgdal1i libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 09-Jul-2018 11:50:04 libgif7 libgirepository-1.0-1 libglib2.0-0 libglib2.0-data libgmp10 build 09-Jul-2018 11:50:04 libgnutls30 libgomp1 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 09-Jul-2018 11:50:04 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 09-Jul-2018 11:50:04 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libisl15 build 09-Jul-2018 11:50:04 libitm1 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 build 09-Jul-2018 11:50:04 libkeyutils1 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal build 09-Jul-2018 11:50:04 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 liblsan0 build 09-Jul-2018 11:50:04 libltdl7 libminizip1 libmnl0 libmpc3 libmpdec2 libmpfr4 libmpx0 build 09-Jul-2018 11:50:04 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 09-Jul-2018 11:50:04 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpq5 libproj9 build 09-Jul-2018 11:50:04 libpython-dev libpython2.7 libpython2.7-dev libpython3-stdlib build 09-Jul-2018 11:50:04 libpython3.5-minimal libpython3.5-stdlib libquadmath0 libroken18-heimdal build 09-Jul-2018 11:50:04 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libspatialite7 build 09-Jul-2018 11:50:04 libstdc++-5-dev libstdc++6 libsuperlu4 libsz2 libtasn1-6 libtiff5 libtsan0 build 09-Jul-2018 11:50:04 libubsan0 liburiparser1 libwebp5 libwebpmux1 libwind0-heimdal libxerces-c3.1 build 09-Jul-2018 11:50:04 libxml2 libxtables11 linux-libc-dev lsb-release make manpages manpages-dev build 09-Jul-2018 11:50:04 mysql-common netbase odbcinst odbcinst1debian2 patch perl perl-base build 09-Jul-2018 11:50:04 perl-modules-5.22 proj-bin proj-data python-apt-common python-decorator build 09-Jul-2018 11:50:04 python-imaging python-pil python2.7-dev python3 python3-apt python3-dbus build 09-Jul-2018 11:50:04 python3-gi python3-minimal python3-pycurl python3-software-properties build 09-Jul-2018 11:50:04 python3.5 python3.5-minimal rename sgml-base shared-mime-info ucf build 09-Jul-2018 11:50:04 unattended-upgrades xdg-user-dirs xml-core xz-utils build 09-Jul-2018 11:50:04 Suggested packages: build 09-Jul-2018 11:50:04 aptitude | synaptic | wajig apt-doc python-apt binutils-doc bzip2-doc build 09-Jul-2018 11:50:04 cpp-doc gcc-5-locales anacron logrotate checksecurity exim4 | postfix build 09-Jul-2018 11:50:04 | mail-transport-agent dbus-user-session | dbus-x11 debian-keyring build 09-Jul-2018 11:50:04 g++-multilib g++-5-multilib gcc-5-doc libstdc++6-5-dbg gcc-multilib autoconf build 09-Jul-2018 11:50:04 automake libtool flex bison gdb gcc-doc gcc-5-multilib libgcc1-dbg build 09-Jul-2018 11:50:04 libgomp1-dbg libitm1-dbg libatomic1-dbg libasan2-dbg liblsan0-dbg build 09-Jul-2018 11:50:04 libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx0-dbg libquadmath0-dbg ppp build 09-Jul-2018 11:50:04 rdnssd iproute2-doc resolvconf avahi-autoipd isc-dhcp-client-ddns apparmor build 09-Jul-2018 11:50:04 isoquery glibc-doc gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev build 09-Jul-2018 11:50:04 hdf4-tools libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc build 09-Jul-2018 11:50:04 odbc-postgresql tdsodbc unixodbc-bin ogdi-bin poppler-data build 09-Jul-2018 11:50:04 libsasl2-modules-otp libsasl2-modules-ldap libsasl2-modules-sql build 09-Jul-2018 11:50:04 libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal build 09-Jul-2018 11:50:04 libstdc++-5-doc lsb make-doc man-browser ed diffutils-doc perl-doc build 09-Jul-2018 11:50:04 libterm-readline-gnu-perl | libterm-readline-perl-perl gfortran python-nose build 09-Jul-2018 11:50:04 python-numpy-dbg python-numpy-doc python-pil-doc python-pil-dbg build 09-Jul-2018 11:50:04 python-scipy-doc python3-doc python3-tk python3-venv python3-apt-dbg build 09-Jul-2018 11:50:04 python-apt-doc python-dbus-doc python3-dbus-dbg libcurl4-gnutls-dev build 09-Jul-2018 11:50:04 python-pycurl-doc python3-pycurl-dbg python3.5-venv python3.5-doc build 09-Jul-2018 11:50:04 binfmt-support sgml-base-doc bsd-mailx mail-transport-agent debhelper build 09-Jul-2018 11:50:04 The following NEW packages will be installed: build 09-Jul-2018 11:50:04 apt-utils binutils build-essential bzip2 cpp cpp-5 cron dbus dh-python build 09-Jul-2018 11:50:04 distro-info-data dpkg-dev fakeroot fontconfig-config fonts-dejavu-core g++ build 09-Jul-2018 11:50:04 g++-5 gcc gcc-5 gdal-bin gir1.2-glib-2.0 ifupdown iproute2 isc-dhcp-client build 09-Jul-2018 11:50:04 isc-dhcp-common iso-codes krb5-locales libaec0 libalgorithm-diff-perl build 09-Jul-2018 11:50:04 libalgorithm-diff-xs-perl libalgorithm-merge-perl libapt-inst2.0 build 09-Jul-2018 11:50:04 libarmadillo6 libarpack2 libasan2 libasn1-8-heimdal libatm1 libatomic1 build 09-Jul-2018 11:50:04 libblas-common libblas3 libc-dev-bin libc6-dev libcap-ng0 libcc1-0 build 09-Jul-2018 11:50:04 libcilkrts5 libcurl3-gnutls libdap17v5 libdapclient6v5 libdbus-1-3 build 09-Jul-2018 11:50:04 libdbus-glib-1-2 libdns-export162 libdpkg-perl libepsilon1 libexpat1-dev build 09-Jul-2018 11:50:04 libfakeroot libfile-fcntllock-perl libfontconfig1 libfreetype6 libfreexl1 build 09-Jul-2018 11:50:04 libgcc-5-dev libgdal1i libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 09-Jul-2018 11:50:04 libgif7 libgirepository-1.0-1 libglib2.0-0 libglib2.0-data libgmp10 build 09-Jul-2018 11:50:04 libgnutls30 libgomp1 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 09-Jul-2018 11:50:04 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 09-Jul-2018 11:50:04 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libisl15 build 09-Jul-2018 11:50:04 libitm1 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 build 09-Jul-2018 11:50:04 libkeyutils1 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal build 09-Jul-2018 11:50:04 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 liblsan0 build 09-Jul-2018 11:50:04 libltdl7 libminizip1 libmnl0 libmpc3 libmpdec2 libmpfr4 libmpx0 build 09-Jul-2018 11:50:04 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 09-Jul-2018 11:50:04 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpq5 libproj9 build 09-Jul-2018 11:50:04 libpython-dev libpython2.7 libpython2.7-dev libpython3-stdlib build 09-Jul-2018 11:50:04 libpython3.5-minimal libpython3.5-stdlib libquadmath0 libroken18-heimdal build 09-Jul-2018 11:50:04 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libspatialite7 build 09-Jul-2018 11:50:04 libstdc++-5-dev libsuperlu4 libsz2 libtasn1-6 libtiff5 libtsan0 libubsan0 build 09-Jul-2018 11:50:04 liburiparser1 libwebp5 libwebpmux1 libwind0-heimdal libxerces-c3.1 libxml2 build 09-Jul-2018 11:50:04 libxtables11 linux-libc-dev lsb-release make manpages manpages-dev build 09-Jul-2018 11:50:04 mysql-common netbase odbcinst odbcinst1debian2 patch perl perl-modules-5.22 build 09-Jul-2018 11:50:04 proj-bin proj-data python-apt-common python-decorator python-dev python-gdal build 09-Jul-2018 11:50:04 python-imaging python-numpy python-pil python-scipy python2.7-dev python3 build 09-Jul-2018 11:50:04 python3-apt python3-dbus python3-gi python3-minimal python3-pycurl build 09-Jul-2018 11:50:04 python3-software-properties python3.5 python3.5-minimal rename sgml-base build 09-Jul-2018 11:50:04 shared-mime-info software-properties-common ucf unattended-upgrades build 09-Jul-2018 11:50:04 xdg-user-dirs xml-core xz-utils build 09-Jul-2018 11:50:04 The following packages will be upgraded: build 09-Jul-2018 11:50:04 apt gcc-5-base libapt-pkg5.0 libstdc++6 perl-base build 09-Jul-2018 11:50:05 5 upgraded, 188 newly installed, 0 to remove and 3 not upgraded. build 09-Jul-2018 11:50:05 Need to get 134 MB of archives. build 09-Jul-2018 11:50:05 After this operation, 468 MB of additional disk space will be used. build 09-Jul-2018 11:50:05 Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-base amd64 5.22.1-9ubuntu0.5 [1284 kB] build 09-Jul-2018 11:50:06 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 09-Jul-2018 11:50:06 Get:3 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 09-Jul-2018 11:50:06 Get:4 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libapt-pkg5.0 amd64 1.2.27 [706 kB] build 09-Jul-2018 11:50:06 Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 apt amd64 1.2.27 [1042 kB] build 09-Jul-2018 11:50:06 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 cron amd64 3.0pl1-128ubuntu2 [68.4 kB] build 09-Jul-2018 11:50:06 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatm1 amd64 1:2.5.1-1.5 [24.2 kB] build 09-Jul-2018 11:50:06 Get:8 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmnl0 amd64 1.0.3-5 [12.0 kB] build 09-Jul-2018 11:50:06 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython3.5-minimal amd64 3.5.2-2ubuntu0~16.04.4 [523 kB] build 09-Jul-2018 11:50:06 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3.5-minimal amd64 3.5.2-2ubuntu0~16.04.4 [1597 kB] build 09-Jul-2018 11:50:06 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-minimal amd64 3.5.1-3 [23.3 kB] build 09-Jul-2018 11:50:06 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpdec2 amd64 2.4.2-1 [82.6 kB] build 09-Jul-2018 11:50:06 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython3.5-stdlib amd64 3.5.2-2ubuntu0~16.04.4 [2132 kB] build 09-Jul-2018 11:50:06 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3.5 amd64 3.5.2-2ubuntu0~16.04.4 [165 kB] build 09-Jul-2018 11:50:06 Get:15 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpython3-stdlib amd64 3.5.1-3 [6818 B] build 09-Jul-2018 11:50:06 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dh-python all 2.20151103ubuntu1.1 [74.1 kB] build 09-Jul-2018 11:50:06 Get:17 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3 amd64 3.5.1-3 [8710 B] build 09-Jul-2018 11:50:06 Get:18 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgdbm3 amd64 1.8.3-13.1 [16.9 kB] build 09-Jul-2018 11:50:06 Get:19 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 09-Jul-2018 11:50:06 Get:20 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3 [111 kB] build 09-Jul-2018 11:50:06 Get:21 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 09-Jul-2018 11:50:06 Get:22 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 09-Jul-2018 11:50:06 Get:23 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 09-Jul-2018 11:50:06 Get:24 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 09-Jul-2018 11:50:06 Get:25 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-modules-5.22 all 5.22.1-9ubuntu0.5 [2645 kB] build 09-Jul-2018 11:50:06 Get:26 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libperl5.22 amd64 5.22.1-9ubuntu0.5 [3396 kB] build 09-Jul-2018 11:50:07 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl amd64 5.22.1-9ubuntu0.5 [238 kB] build 09-Jul-2018 11:50:07 Get:28 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 09-Jul-2018 11:50:07 Get:29 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 09-Jul-2018 11:50:07 Get:30 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpfr4 amd64 3.1.4-1 [191 kB] build 09-Jul-2018 11:50:07 Get:31 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpc3 amd64 1.0.3-1 [39.7 kB] build 09-Jul-2018 11:50:07 Get:32 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libapt-inst2.0 amd64 1.2.27 [55.4 kB] build 09-Jul-2018 11:50:07 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 apt-utils amd64 1.2.27 [196 kB] build 09-Jul-2018 11:50:07 Get:34 http://archive.ubuntu.com/ubuntu xenial/main amd64 bzip2 amd64 1.0.6-8 [32.7 kB] build 09-Jul-2018 11:50:07 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 distro-info-data all 0.28ubuntu0.8 [4502 B] build 09-Jul-2018 11:50:07 Get:36 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 iproute2 amd64 4.3.0-1ubuntu3.16.04.3 [522 kB] build 09-Jul-2018 11:50:07 Get:37 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ifupdown amd64 0.8.10ubuntu1.4 [54.9 kB] build 09-Jul-2018 11:50:07 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libisc-export160 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [153 kB] build 09-Jul-2018 11:50:07 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdns-export162 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [666 kB] build 09-Jul-2018 11:50:07 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-client amd64 4.3.3-5ubuntu12.10 [224 kB] build 09-Jul-2018 11:50:07 Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-common amd64 4.3.3-5ubuntu12.10 [105 kB] build 09-Jul-2018 11:50:07 Get:42 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 09-Jul-2018 11:50:07 Get:43 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 09-Jul-2018 11:50:07 Get:44 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 09-Jul-2018 11:50:07 Get:45 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 09-Jul-2018 11:50:07 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 09-Jul-2018 11:50:07 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 09-Jul-2018 11:50:07 Get:48 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1 [116 kB] build 09-Jul-2018 11:50:07 Get:49 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxtables11 amd64 1.6.0-2ubuntu3 [27.2 kB] build 09-Jul-2018 11:50:07 Get:50 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 lsb-release all 9.20160110ubuntu0.2 [11.8 kB] build 09-Jul-2018 11:50:07 Get:51 http://archive.ubuntu.com/ubuntu xenial/main amd64 netbase all 5.3 [12.9 kB] build 09-Jul-2018 11:50:07 Get:52 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 09-Jul-2018 11:50:07 Get:53 http://archive.ubuntu.com/ubuntu xenial/main amd64 libcap-ng0 amd64 0.7.7-1 [10.9 kB] build 09-Jul-2018 11:50:07 Get:54 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdbus-1-3 amd64 1.10.6-1ubuntu3.3 [161 kB] build 09-Jul-2018 11:50:07 Get:55 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dbus amd64 1.10.6-1ubuntu3.3 [142 kB] build 09-Jul-2018 11:50:07 Get:56 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libglib2.0-0 amd64 2.48.2-0ubuntu1 [1119 kB] build 09-Jul-2018 11:50:07 Get:57 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgirepository-1.0-1 amd64 1.46.0-3ubuntu1 [88.3 kB] build 09-Jul-2018 11:50:07 Get:58 http://archive.ubuntu.com/ubuntu xenial/main amd64 gir1.2-glib-2.0 amd64 1.46.0-3ubuntu1 [127 kB] build 09-Jul-2018 11:50:07 Get:59 http://archive.ubuntu.com/ubuntu xenial/main amd64 iso-codes all 3.65-1 [2268 kB] build 09-Jul-2018 11:50:07 Get:60 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 09-Jul-2018 11:50:07 Get:61 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 09-Jul-2018 11:50:07 Get:62 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 09-Jul-2018 11:50:07 Get:63 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 09-Jul-2018 11:50:07 Get:64 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libk5crypto3 amd64 1.13.2+dfsg-5ubuntu2 [81.2 kB] build 09-Jul-2018 11:50:07 Get:65 http://archive.ubuntu.com/ubuntu xenial/main amd64 libkeyutils1 amd64 1.5.9-8ubuntu1 [9904 B] build 09-Jul-2018 11:50:07 Get:66 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-3 amd64 1.13.2+dfsg-5ubuntu2 [273 kB] build 09-Jul-2018 11:50:07 Get:67 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi-krb5-2 amd64 1.13.2+dfsg-5ubuntu2 [120 kB] build 09-Jul-2018 11:50:07 Get:68 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhcrypto4-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [85.0 kB] build 09-Jul-2018 11:50:07 Get:69 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimbase1-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [29.3 kB] build 09-Jul-2018 11:50:07 Get:70 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwind0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [47.8 kB] build 09-Jul-2018 11:50:07 Get:71 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhx509-5-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [107 kB] build 09-Jul-2018 11:50:07 Get:72 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 09-Jul-2018 11:50:07 Get:73 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 09-Jul-2018 11:50:07 Get:74 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 09-Jul-2018 11:50:07 Get:75 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 09-Jul-2018 11:50:07 Get:76 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 09-Jul-2018 11:50:07 Get:77 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu3.3 [161 kB] build 09-Jul-2018 11:50:07 Get:78 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d-1ubuntu0.1 [54.4 kB] build 09-Jul-2018 11:50:07 Get:79 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcurl3-gnutls amd64 7.47.0-1ubuntu2.8 [185 kB] build 09-Jul-2018 11:50:07 Get:80 http://archive.ubuntu.com/ubuntu xenial/main amd64 libdbus-glib-1-2 amd64 0.106-1 [67.1 kB] build 09-Jul-2018 11:50:07 Get:81 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libglib2.0-data all 2.48.2-0ubuntu1 [132 kB] build 09-Jul-2018 11:50:07 Get:82 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 09-Jul-2018 11:50:08 Get:83 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules amd64 2.1.26.dfsg1-14build1 [47.5 kB] build 09-Jul-2018 11:50:08 Get:84 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.5 [697 kB] build 09-Jul-2018 11:50:08 Get:85 http://archive.ubuntu.com/ubuntu xenial/main amd64 manpages all 4.04-2 [1087 kB] build 09-Jul-2018 11:50:08 Get:86 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-apt-common all 1.1.0~beta1ubuntu0.16.04.1 [16.0 kB] build 09-Jul-2018 11:50:08 Get:87 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3-apt amd64 1.1.0~beta1ubuntu0.16.04.1 [137 kB] build 09-Jul-2018 11:50:08 Get:88 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-dbus amd64 1.2.0-3 [83.1 kB] build 09-Jul-2018 11:50:08 Get:89 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-gi amd64 3.20.0-0ubuntu1 [153 kB] build 09-Jul-2018 11:50:08 Get:90 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 shared-mime-info amd64 1.5-2ubuntu0.1 [405 kB] build 09-Jul-2018 11:50:08 Get:91 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 xdg-user-dirs amd64 0.15-2ubuntu6.16.04.1 [61.8 kB] build 09-Jul-2018 11:50:08 Get:92 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 09-Jul-2018 11:50:08 Get:93 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 binutils amd64 2.26.1-1ubuntu1~16.04.6 [2311 kB] build 09-Jul-2018 11:50:08 Get:94 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc-dev-bin amd64 2.23-0ubuntu10 [68.7 kB] build 09-Jul-2018 11:50:08 Get:95 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 linux-libc-dev amd64 4.4.0-130.156 [866 kB] build 09-Jul-2018 11:50:08 Get:96 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc6-dev amd64 2.23-0ubuntu10 [2079 kB] build 09-Jul-2018 11:50:08 Get:97 http://archive.ubuntu.com/ubuntu xenial/main amd64 libisl15 amd64 0.16.1-1 [524 kB] build 09-Jul-2018 11:50:08 Get:98 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 cpp-5 amd64 5.4.0-6ubuntu1~16.04.10 [7671 kB] build 09-Jul-2018 11:50:08 Get:99 http://archive.ubuntu.com/ubuntu xenial/main amd64 cpp amd64 4:5.3.1-1ubuntu1 [27.7 kB] build 09-Jul-2018 11:50:08 Get:100 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcc1-0 amd64 5.4.0-6ubuntu1~16.04.10 [38.8 kB] build 09-Jul-2018 11:50:08 Get:101 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgomp1 amd64 5.4.0-6ubuntu1~16.04.10 [55.1 kB] build 09-Jul-2018 11:50:09 Get:102 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libitm1 amd64 5.4.0-6ubuntu1~16.04.10 [27.4 kB] build 09-Jul-2018 11:50:09 Get:103 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libatomic1 amd64 5.4.0-6ubuntu1~16.04.10 [8888 B] build 09-Jul-2018 11:50:09 Get:104 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasan2 amd64 5.4.0-6ubuntu1~16.04.10 [264 kB] build 09-Jul-2018 11:50:09 Get:105 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 liblsan0 amd64 5.4.0-6ubuntu1~16.04.10 [105 kB] build 09-Jul-2018 11:50:09 Get:106 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtsan0 amd64 5.4.0-6ubuntu1~16.04.10 [244 kB] build 09-Jul-2018 11:50:10 Get:107 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libubsan0 amd64 5.4.0-6ubuntu1~16.04.10 [95.3 kB] build 09-Jul-2018 11:50:10 Get:108 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcilkrts5 amd64 5.4.0-6ubuntu1~16.04.10 [40.1 kB] build 09-Jul-2018 11:50:10 Get:109 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmpx0 amd64 5.4.0-6ubuntu1~16.04.10 [9764 B] build 09-Jul-2018 11:50:10 Get:110 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB] build 09-Jul-2018 11:50:10 Get:111 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgcc-5-dev amd64 5.4.0-6ubuntu1~16.04.10 [2228 kB] build 09-Jul-2018 11:50:10 Get:112 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5 amd64 5.4.0-6ubuntu1~16.04.10 [8426 kB] build 09-Jul-2018 11:50:11 Get:113 http://archive.ubuntu.com/ubuntu xenial/main amd64 gcc amd64 4:5.3.1-1ubuntu1 [5244 B] build 09-Jul-2018 11:50:11 Get:114 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++-5-dev amd64 5.4.0-6ubuntu1~16.04.10 [1426 kB] build 09-Jul-2018 11:50:11 Get:115 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 g++-5 amd64 5.4.0-6ubuntu1~16.04.10 [8319 kB] build 09-Jul-2018 11:50:11 Get:116 http://archive.ubuntu.com/ubuntu xenial/main amd64 g++ amd64 4:5.3.1-1ubuntu1 [1504 B] build 09-Jul-2018 11:50:12 Get:117 http://archive.ubuntu.com/ubuntu xenial/main amd64 make amd64 4.1-6 [151 kB] build 09-Jul-2018 11:50:12 Get:118 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdpkg-perl all 1.18.4ubuntu1.4 [195 kB] build 09-Jul-2018 11:50:12 Get:119 http://archive.ubuntu.com/ubuntu xenial/main amd64 xz-utils amd64 5.1.1alpha+20120614-2ubuntu2 [78.8 kB] build 09-Jul-2018 11:50:12 Get:120 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 patch amd64 2.7.5-1ubuntu0.16.04.1 [90.5 kB] build 09-Jul-2018 11:50:12 Get:121 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dpkg-dev all 1.18.4ubuntu1.4 [584 kB] build 09-Jul-2018 11:50:12 Get:122 http://archive.ubuntu.com/ubuntu xenial/main amd64 build-essential amd64 12.1ubuntu2 [4758 B] build 09-Jul-2018 11:50:12 Get:123 http://archive.ubuntu.com/ubuntu xenial/main amd64 libfakeroot amd64 1.20.2-1ubuntu1 [25.5 kB] build 09-Jul-2018 11:50:12 Get:124 http://archive.ubuntu.com/ubuntu xenial/main amd64 fakeroot amd64 1.20.2-1ubuntu1 [61.8 kB] build 09-Jul-2018 11:50:12 Get:125 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 09-Jul-2018 11:50:13 Get:126 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 09-Jul-2018 11:50:13 Get:127 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB] build 09-Jul-2018 11:50:13 Get:128 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 09-Jul-2018 11:50:13 Get:129 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 09-Jul-2018 11:50:13 Get:130 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarmadillo6 amd64 1:6.500.5+dfsg-1 [75.2 kB] build 09-Jul-2018 11:50:13 Get:131 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 09-Jul-2018 11:50:13 Get:132 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 09-Jul-2018 11:50:13 Get:133 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libepsilon1 amd64 0.9.2-3ubuntu1 [41.0 kB] build 09-Jul-2018 11:50:14 Get:134 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libfreexl1 amd64 1.0.2-1 [33.6 kB] build 09-Jul-2018 11:50:14 Get:135 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-3.5.0 amd64 3.5.0-1ubuntu2 [477 kB] build 09-Jul-2018 11:50:14 Get:136 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-c1v5 amd64 3.5.0-1ubuntu2 [52.4 kB] build 09-Jul-2018 11:50:14 Get:137 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgif7 amd64 5.1.4-0.3~16.04 [30.5 kB] build 09-Jul-2018 11:50:14 Get:138 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] build 09-Jul-2018 11:50:14 Get:139 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf4-0-alt amd64 4.2.10-3.2 [264 kB] build 09-Jul-2018 11:50:14 Get:140 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libaec0 amd64 0.3.2-1 [18.0 kB] build 09-Jul-2018 11:50:14 Get:141 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsz2 amd64 0.3.2-1 [5048 B] build 09-Jul-2018 11:50:14 Get:142 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf5-10 amd64 1.8.16+docs-4ubuntu1 [995 kB] build 09-Jul-2018 11:50:14 Get:143 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjasper1 amd64 1.900.1-debian1-2.4ubuntu1.2 [131 kB] build 09-Jul-2018 11:50:15 Get:144 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libminizip1 amd64 1.1-8 [20.3 kB] build 09-Jul-2018 11:50:15 Get:145 http://archive.ubuntu.com/ubuntu xenial/universe amd64 liburiparser1 amd64 0.8.4-1 [38.0 kB] build 09-Jul-2018 11:50:15 Get:146 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlbase1 amd64 1.3.0-1 [43.9 kB] build 09-Jul-2018 11:50:15 Get:147 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmldom1 amd64 1.3.0-1 [175 kB] build 09-Jul-2018 11:50:15 Get:148 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlengine1 amd64 1.3.0-1 [77.1 kB] build 09-Jul-2018 11:50:15 Get:149 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 mysql-common all 5.7.22-0ubuntu0.16.04.1 [15.4 kB] build 09-Jul-2018 11:50:15 Get:150 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmysqlclient20 amd64 5.7.22-0ubuntu0.16.04.1 [809 kB] build 09-Jul-2018 11:50:15 Get:151 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libnetcdf11 amd64 1:4.4.0-2 [286 kB] build 09-Jul-2018 11:50:15 Get:152 http://archive.ubuntu.com/ubuntu xenial/main amd64 libltdl7 amd64 2.4.6-0.1 [38.3 kB] build 09-Jul-2018 11:50:15 Get:153 http://archive.ubuntu.com/ubuntu xenial/main amd64 libodbc1 amd64 2.3.1-4.1 [180 kB] build 09-Jul-2018 11:50:16 Get:154 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-data all 4.9.2-2 [4004 kB] build 09-Jul-2018 11:50:16 Get:155 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libproj9 amd64 4.9.2-2 [143 kB] build 09-Jul-2018 11:50:16 Get:156 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libogdi3.2 amd64 3.2.0~beta2-7.1build1 [212 kB] build 09-Jul-2018 11:50:16 Get:157 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 libopenjp2-7 amd64 2.1.0-2.1ubuntu0.1 [103 kB] build 09-Jul-2018 11:50:16 Get:158 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfreetype6 amd64 2.6.1-0.1ubuntu2.3 [316 kB] build 09-Jul-2018 11:50:16 Get:159 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfontconfig1 amd64 2.11.94-0ubuntu1.1 [131 kB] build 09-Jul-2018 11:50:16 Get:160 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtiff5 amd64 4.0.6-1ubuntu0.4 [148 kB] build 09-Jul-2018 11:50:17 Get:161 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpoppler58 amd64 0.41.0-0ubuntu1.7 [758 kB] build 09-Jul-2018 11:50:17 Get:162 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpq5 amd64 9.5.13-0ubuntu0.16.04 [78.7 kB] build 09-Jul-2018 11:50:17 Get:163 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libspatialite7 amd64 4.3.0a-5 [1222 kB] build 09-Jul-2018 11:50:17 Get:164 http://archive.ubuntu.com/ubuntu xenial/main amd64 libwebp5 amd64 0.4.4-1 [165 kB] build 09-Jul-2018 11:50:17 Get:165 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libxerces-c3.1 amd64 3.1.3+debian-1 [842 kB] build 09-Jul-2018 11:50:17 Get:166 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst amd64 2.3.1-4.1 [13.1 kB] build 09-Jul-2018 11:50:17 Get:167 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst1debian2 amd64 2.3.1-4.1 [41.1 kB] build 09-Jul-2018 11:50:17 Get:168 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgdal1i amd64 1.11.3+dfsg-3build2 [4013 kB] build 09-Jul-2018 11:50:18 Get:169 http://archive.ubuntu.com/ubuntu xenial/universe amd64 gdal-bin amd64 1.11.3+dfsg-3build2 [226 kB] build 09-Jul-2018 11:50:18 Get:170 http://archive.ubuntu.com/ubuntu xenial/main amd64 libalgorithm-diff-perl all 1.19.03-1 [47.6 kB] build 09-Jul-2018 11:50:18 Get:171 http://archive.ubuntu.com/ubuntu xenial/main amd64 libalgorithm-diff-xs-perl amd64 0.04-4build1 [11.0 kB] build 09-Jul-2018 11:50:18 Get:172 http://archive.ubuntu.com/ubuntu xenial/main amd64 libalgorithm-merge-perl all 0.08-3 [12.0 kB] build 09-Jul-2018 11:50:18 Get:173 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1-dev amd64 2.1.0-7ubuntu0.16.04.3 [115 kB] build 09-Jul-2018 11:50:18 Get:174 http://archive.ubuntu.com/ubuntu xenial/main amd64 libfile-fcntllock-perl amd64 0.22-3 [32.0 kB] build 09-Jul-2018 11:50:18 Get:175 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7 amd64 2.7.12-1ubuntu0~16.04.3 [1070 kB] build 09-Jul-2018 11:50:18 Get:176 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-dev amd64 2.7.12-1ubuntu0~16.04.3 [27.8 MB] build 09-Jul-2018 11:50:20 Get:177 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython-dev amd64 2.7.12-1~16.04 [7840 B] build 09-Jul-2018 11:50:20 Get:178 http://archive.ubuntu.com/ubuntu xenial/main amd64 manpages-dev all 4.04-2 [2048 kB] build 09-Jul-2018 11:50:20 Get:179 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-decorator all 4.0.6-1 [9326 B] build 09-Jul-2018 11:50:20 Get:180 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7-dev amd64 2.7.12-1ubuntu0~16.04.3 [276 kB] build 09-Jul-2018 11:50:20 Get:181 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-dev amd64 2.7.12-1~16.04 [1186 B] build 09-Jul-2018 11:50:20 Get:182 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-numpy amd64 1:1.11.0-1ubuntu1 [1763 kB] build 09-Jul-2018 11:50:21 Get:183 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-gdal amd64 1.11.3+dfsg-3build2 [423 kB] build 09-Jul-2018 11:50:21 Get:184 http://archive.ubuntu.com/ubuntu xenial/main amd64 libwebpmux1 amd64 0.4.4-1 [14.2 kB] build 09-Jul-2018 11:50:21 Get:185 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-pil amd64 3.1.2-0ubuntu1.1 [312 kB] build 09-Jul-2018 11:50:21 Get:186 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-imaging all 3.1.2-0ubuntu1.1 [4596 B] build 09-Jul-2018 11:50:21 Get:187 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-pycurl amd64 7.43.0-1ubuntu1 [42.3 kB] build 09-Jul-2018 11:50:21 Get:188 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3-software-properties all 0.96.20.7 [20.3 kB] build 09-Jul-2018 11:50:21 Get:189 http://archive.ubuntu.com/ubuntu xenial/main amd64 rename all 0.20-4 [12.0 kB] build 09-Jul-2018 11:50:21 Get:190 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 software-properties-common all 0.96.20.7 [9452 B] build 09-Jul-2018 11:50:21 Get:191 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 unattended-upgrades all 0.90ubuntu0.9 [32.3 kB] build 09-Jul-2018 11:50:21 Get:192 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-bin amd64 4.9.2-2 [31.3 kB] build 09-Jul-2018 11:50:22 Get:193 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-scipy amd64 0.17.0-1 [8733 kB] build 09-Jul-2018 11:50:22 debconf: delaying package configuration, since apt-utils is 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.../libapt-pkg5.0_1.2.27_amd64.deb ... build 09-Jul-2018 11:50:49 Unpacking libapt-pkg5.0:amd64 (1.2.27) over (1.2.26) ... build 09-Jul-2018 11:50:52 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 09-Jul-2018 11:50:52 Setting up libapt-pkg5.0:amd64 (1.2.27) ... build 09-Jul-2018 11:50:52 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 09-Jul-2018 11:50:53 (Reading database ... build 09-Jul-2018 11:50:53 (Reading database ... 5% build 09-Jul-2018 11:50:53 (Reading database ... 10% build 09-Jul-2018 11:50:53 (Reading database ... 15% build 09-Jul-2018 11:50:53 (Reading database ... 20% build 09-Jul-2018 11:50:53 (Reading database ... 25% build 09-Jul-2018 11:50:53 (Reading database ... 30% build 09-Jul-2018 11:50:53 (Reading database ... 35% build 09-Jul-2018 11:50:53 (Reading database ... 40% build 09-Jul-2018 11:50:53 (Reading database ... 45% build 09-Jul-2018 11:50:53 (Reading database ... 50% build 09-Jul-2018 11:50:53 (Reading database ... 55% build 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triggers for libc-bin (2.23-0ubuntu10) ... build 09-Jul-2018 11:51:07 Selecting previously unselected package cron. build 09-Jul-2018 11:51:07 (Reading database ... build 09-Jul-2018 11:51:07 (Reading database ... 5% build 09-Jul-2018 11:51:07 (Reading database ... 10% build 09-Jul-2018 11:51:07 (Reading database ... 15% build 09-Jul-2018 11:51:07 (Reading database ... 20% build 09-Jul-2018 11:51:07 (Reading database ... 25% build 09-Jul-2018 11:51:07 (Reading database ... 30% build 09-Jul-2018 11:51:07 (Reading database ... 35% build 09-Jul-2018 11:51:07 (Reading database ... 40% build 09-Jul-2018 11:51:07 (Reading database ... 45% build 09-Jul-2018 11:51:07 (Reading database ... 50% build 09-Jul-2018 11:51:07 (Reading database ... 55% build 09-Jul-2018 11:51:07 (Reading database ... 60% build 09-Jul-2018 11:51:07 (Reading database ... 65% build 09-Jul-2018 11:51:07 (Reading database ... 70% build 09-Jul-2018 11:51:07 (Reading database ... 75% build 09-Jul-2018 11:51:07 (Reading 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update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 09-Jul-2018 11:54:04 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 09-Jul-2018 11:54:04 Setting up perl-modules-5.22 (5.22.1-9ubuntu0.5) ... build 09-Jul-2018 11:54:04 Setting up libperl5.22:amd64 (5.22.1-9ubuntu0.5) ... build 09-Jul-2018 11:54:04 Setting up perl (5.22.1-9ubuntu0.5) ... build 09-Jul-2018 11:54:05 update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode build 09-Jul-2018 11:54:05 Setting up libjbig0:amd64 (2.1-3.1) ... build 09-Jul-2018 11:54:05 Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ... build 09-Jul-2018 11:54:05 Setting up libmpfr4:amd64 (3.1.4-1) ... build 09-Jul-2018 11:54:05 Setting up libmpc3:amd64 (1.0.3-1) ... build 09-Jul-2018 11:54:06 Setting up libapt-inst2.0:amd64 (1.2.27) ... build 09-Jul-2018 11:54:06 Setting up apt-utils (1.2.27) ... build 09-Jul-2018 11:54:06 Setting up bzip2 (1.0.6-8) 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libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 09-Jul-2018 11:54:12 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 09-Jul-2018 11:54:12 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1) ... build 09-Jul-2018 11:54:12 Setting up libxtables11:amd64 (1.6.0-2ubuntu3) ... build 09-Jul-2018 11:54:12 Setting up netbase (5.3) ... build 09-Jul-2018 11:54:13 Setting up ucf (3.0036) ... build 09-Jul-2018 11:54:13 debconf: unable to initialize frontend: Dialog build 09-Jul-2018 11:54:13 debconf: (TERM is not set, so the dialog frontend is not usable.) build 09-Jul-2018 11:54:13 debconf: falling back to frontend: Readline build 09-Jul-2018 11:54:14 Setting up libcap-ng0:amd64 (0.7.7-1) ... build 09-Jul-2018 11:54:14 Setting up libdbus-1-3:amd64 (1.10.6-1ubuntu3.3) ... build 09-Jul-2018 11:54:14 Setting up dbus (1.10.6-1ubuntu3.3) ... build 09-Jul-2018 11:54:15 Setting up libglib2.0-0:amd64 (2.48.2-0ubuntu1) ... build 09-Jul-2018 11:54:16 No schema files found: doing nothing. build 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(1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:54:19 Setting up libheimbase1-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:54:19 Setting up libwind0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:54:19 Setting up libhx509-5-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:54:19 Setting up libkrb5-26-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:54:19 Setting up libheimntlm0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:54:20 Setting up libgssapi3-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:54:20 Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 11:54:20 Setting up libsasl2-2:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 11:54:20 Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu3.3) ... build 09-Jul-2018 11:54:21 Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d-1ubuntu0.1) ... build 09-Jul-2018 11:54:21 Setting up libcurl3-gnutls:amd64 (7.47.0-1ubuntu2.8) ... build 09-Jul-2018 11:54:22 Setting up libdbus-glib-1-2:amd64 (0.106-1) ... build 09-Jul-2018 11:54:22 Setting up libglib2.0-data (2.48.2-0ubuntu1) ... build 09-Jul-2018 11:54:22 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 09-Jul-2018 11:54:22 Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 11:54:23 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.5) ... build 09-Jul-2018 11:54:23 Setting up manpages (4.04-2) ... build 09-Jul-2018 11:54:23 Setting up python-apt-common (1.1.0~beta1ubuntu0.16.04.1) ... build 09-Jul-2018 11:54:23 Setting up shared-mime-info (1.5-2ubuntu0.1) ... build 09-Jul-2018 11:54:50 Setting up xdg-user-dirs (0.15-2ubuntu6.16.04.1) ... build 09-Jul-2018 11:54:50 Setting up xml-core (0.13+nmu2) ... build 09-Jul-2018 11:54:51 Setting up binutils (2.26.1-1ubuntu1~16.04.6) ... build 09-Jul-2018 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build 09-Jul-2018 11:54:53 Setting up libubsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:54:54 Setting up libcilkrts5:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:54:54 Setting up libmpx0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:54:54 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:54:54 Setting up libgcc-5-dev:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:54:54 Setting up gcc-5 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:54:54 Setting up gcc (4:5.3.1-1ubuntu1) ... build 09-Jul-2018 11:54:55 Setting up libstdc++-5-dev:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:54:55 Setting up g++-5 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:54:55 Setting up g++ (4:5.3.1-1ubuntu1) ... build 09-Jul-2018 11:54:55 update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode build 09-Jul-2018 11:54:55 Setting up make (4.1-6) ... build 09-Jul-2018 11:54:56 Setting up 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liblapack3 (3.6.0-2ubuntu2) ... build 09-Jul-2018 11:55:00 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 09-Jul-2018 11:55:00 Setting up libarpack2 (3.3.0-1build2) ... build 09-Jul-2018 11:55:00 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 09-Jul-2018 11:55:00 Setting up libdap17v5:amd64 (3.15.1-7) ... build 09-Jul-2018 11:55:01 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 09-Jul-2018 11:55:01 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 09-Jul-2018 11:55:01 Setting up libfreexl1:amd64 (1.0.2-1) ... build 09-Jul-2018 11:55:01 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 09-Jul-2018 11:55:02 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 09-Jul-2018 11:55:02 Setting up libgif7:amd64 (5.1.4-0.3~16.04) ... build 09-Jul-2018 11:55:02 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 09-Jul-2018 11:55:02 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 09-Jul-2018 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(1:4.4.0-2) ... build 09-Jul-2018 11:55:04 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 09-Jul-2018 11:55:04 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 09-Jul-2018 11:55:04 Setting up proj-data (4.9.2-2) ... build 09-Jul-2018 11:55:05 Setting up libproj9 (4.9.2-2) ... build 09-Jul-2018 11:55:05 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 09-Jul-2018 11:55:05 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 09-Jul-2018 11:55:05 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 09-Jul-2018 11:55:05 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 09-Jul-2018 11:55:05 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 09-Jul-2018 11:55:05 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 09-Jul-2018 11:55:05 Setting up libpq5:amd64 (9.5.13-0ubuntu0.16.04) ... build 09-Jul-2018 11:55:06 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 09-Jul-2018 11:55:06 Setting up libwebp5:amd64 (0.4.4-1) ... build 09-Jul-2018 11:55:06 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 09-Jul-2018 11:55:06 Setting up libalgorithm-diff-perl (1.19.03-1) ... build 09-Jul-2018 11:55:06 Setting up libalgorithm-diff-xs-perl (0.04-4build1) ... build 09-Jul-2018 11:55:07 Setting up libalgorithm-merge-perl (0.08-3) ... build 09-Jul-2018 11:55:07 Setting up libexpat1-dev:amd64 (2.1.0-7ubuntu0.16.04.3) ... build 09-Jul-2018 11:55:07 Setting up libfile-fcntllock-perl (0.22-3) ... build 09-Jul-2018 11:55:07 Setting up libpython2.7:amd64 (2.7.12-1ubuntu0~16.04.3) ... build 09-Jul-2018 11:55:07 Setting up libpython2.7-dev:amd64 (2.7.12-1ubuntu0~16.04.3) ... build 09-Jul-2018 11:55:07 Setting up libpython-dev:amd64 (2.7.12-1~16.04) ... build 09-Jul-2018 11:55:08 Setting up manpages-dev (4.04-2) ... build 09-Jul-2018 11:55:08 Setting up python-decorator (4.0.6-1) ... build 09-Jul-2018 11:55:10 Setting up python2.7-dev (2.7.12-1ubuntu0~16.04.3) ... build 09-Jul-2018 11:55:10 Setting up python-dev (2.7.12-1~16.04) ... build 09-Jul-2018 11:55:11 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 09-Jul-2018 11:55:14 Setting up libwebpmux1:amd64 (0.4.4-1) ... build 09-Jul-2018 11:55:16 Setting up python-pil:amd64 (3.1.2-0ubuntu1.1) ... build 09-Jul-2018 11:55:18 Setting up python-imaging (3.1.2-0ubuntu1.1) ... build 09-Jul-2018 11:55:20 Setting up rename (0.20-4) ... build 09-Jul-2018 11:55:20 update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode build 09-Jul-2018 11:55:20 Setting up proj-bin (4.9.2-2) ... build 09-Jul-2018 11:55:20 Setting up python-scipy (0.17.0-1) ... build 09-Jul-2018 11:55:24 Setting up python3 (3.5.1-3) ... build 09-Jul-2018 11:55:24 running python rtupdate hooks for python3.5... build 09-Jul-2018 11:55:24 running python post-rtupdate hooks for python3.5... build 09-Jul-2018 11:55:25 Setting up lsb-release (9.20160110ubuntu0.2) ... build 09-Jul-2018 11:55:25 Setting up python3-apt (1.1.0~beta1ubuntu0.16.04.1) ... build 09-Jul-2018 11:55:25 Setting up python3-dbus (1.2.0-3) ... build 09-Jul-2018 11:55:26 Setting up python3-gi (3.20.0-0ubuntu1) ... build 09-Jul-2018 11:55:27 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 09-Jul-2018 11:55:27 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 09-Jul-2018 11:55:28 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 09-Jul-2018 11:55:28 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 09-Jul-2018 11:55:30 Setting up python3-pycurl (7.43.0-1ubuntu1) ... build 09-Jul-2018 11:55:30 Setting up python3-software-properties (0.96.20.7) ... build 09-Jul-2018 11:55:31 Setting up software-properties-common (0.96.20.7) ... build 09-Jul-2018 11:55:31 Setting up unattended-upgrades (0.90ubuntu0.9) ... build 09-Jul-2018 11:55:32 debconf: unable to initialize frontend: Dialog build 09-Jul-2018 11:55:32 debconf: (TERM is not set, so the dialog frontend is not usable.) build 09-Jul-2018 11:55:32 debconf: falling back to frontend: Readline build 09-Jul-2018 11:55:32 build 09-Jul-2018 11:55:32 Creating config file /etc/apt/apt.conf.d/20auto-upgrades with new version build 09-Jul-2018 11:55:32 build 09-Jul-2018 11:55:32 Creating config file /etc/apt/apt.conf.d/50unattended-upgrades with new version build 09-Jul-2018 11:55:33 invoke-rc.d: could not determine current runlevel build 09-Jul-2018 11:55:33 invoke-rc.d: policy-rc.d denied execution of start. build 09-Jul-2018 11:55:33 Setting up dh-python (2.20151103ubuntu1.1) ... build 09-Jul-2018 11:55:33 Setting up odbcinst (2.3.1-4.1) ... build 09-Jul-2018 11:55:34 Processing triggers for systemd (229-4ubuntu21.2) ... build 09-Jul-2018 11:55:34 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 09-Jul-2018 11:55:34 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 09-Jul-2018 11:55:34 Processing triggers for dbus (1.10.6-1ubuntu3.3) ... build 09-Jul-2018 11:55:36 Official stable UbuntuGIS packages. build 09-Jul-2018 11:55:36 build 09-Jul-2018 11:55:36 build 09-Jul-2018 11:55:36 More info: https://launchpad.net/~ubuntugis/+archive/ubuntu/ppa build 09-Jul-2018 11:55:36 gpg: keyring `/tmp/tmp2bh06z1e/secring.gpg' created build 09-Jul-2018 11:55:36 gpg: keyring `/tmp/tmp2bh06z1e/pubring.gpg' created build 09-Jul-2018 11:55:36 gpg: requesting key 314DF160 from hkp server keyserver.ubuntu.com build 09-Jul-2018 11:55:36 gpg: /tmp/tmp2bh06z1e/trustdb.gpg: trustdb created build 09-Jul-2018 11:55:36 gpg: key 314DF160: public key "Launchpad ubuntugis-stable" imported build 09-Jul-2018 11:55:36 gpg: Total number processed: 1 build 09-Jul-2018 11:55:36 gpg: imported: 1 (RSA: 1) build 09-Jul-2018 11:55:36 OK build 09-Jul-2018 11:55:38 Collecting pip==9.0.3 build 09-Jul-2018 11:55:38 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 09-Jul-2018 11:55:38 Installing collected packages: pip build 09-Jul-2018 11:55:38 Found existing installation: pip 8.1.1 build 09-Jul-2018 11:55:38 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 09-Jul-2018 11:55:39 Successfully installed pip-9.0.3 build 09-Jul-2018 11:55:39 You are using pip version 9.0.3, however version 10.0.1 is available. build 09-Jul-2018 11:55:39 You should consider upgrading via the 'pip install --upgrade pip' command. build 09-Jul-2018 11:55:40 Collecting cython>=0.23.4 (from -r /home/clowder/requirements.txt (line 1)) build 09-Jul-2018 11:55:40 Downloading https://files.pythonhosted.org/packages/ae/02/4f218b527aee1a1ea5592ec2f75052f6dbc616f6107a1c7658f92ae19962/Cython-0.28.4-cp27-cp27mu-manylinux1_x86_64.whl (3.3MB) build 09-Jul-2018 11:55:41 Requirement already satisfied: numpy>=1.10.4 in /usr/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 2)) build 09-Jul-2018 11:55:41 Collecting shapely>=1.3.2 (from -r /home/clowder/requirements.txt (line 3)) build 09-Jul-2018 11:55:41 Downloading https://files.pythonhosted.org/packages/a5/cf/0d51a15861d944da8463d8c1aecf39cfc6852ea9ecd092046824e9b237b3/Shapely-1.6.4.post1-cp27-cp27mu-manylinux1_x86_64.whl (1.5MB) build 09-Jul-2018 11:55:42 Collecting pygeoprocessing==0.2.2 (from -r /home/clowder/requirements.txt (line 4)) build 09-Jul-2018 11:55:42 Downloading https://files.pythonhosted.org/packages/5a/00/23b0d22a568308d8626b493f8da4780ac29c29d62a065f8795803f64148f/pygeoprocessing-0.2.2.zip (532kB) build 09-Jul-2018 11:55:43 Requirement already satisfied: pika>=0.10.0 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 5)) build 09-Jul-2018 11:55:43 Requirement already satisfied: requests>=2.9.1 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 6)) build 09-Jul-2018 11:55:43 Requirement already satisfied: scipy in /usr/lib/python2.7/dist-packages (from pygeoprocessing==0.2.2->-r /home/clowder/requirements.txt (line 4)) build 09-Jul-2018 11:55:43 Requirement already satisfied: gdal in /usr/lib/python2.7/dist-packages (from pygeoprocessing==0.2.2->-r /home/clowder/requirements.txt (line 4)) build 09-Jul-2018 11:55:43 Requirement already satisfied: certifi>=2017.4.17 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 09-Jul-2018 11:55:43 Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 09-Jul-2018 11:55:43 Requirement already satisfied: idna<2.7,>=2.5 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 09-Jul-2018 11:55:43 Requirement already satisfied: urllib3<1.23,>=1.21.1 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 09-Jul-2018 11:55:43 Installing collected packages: cython, shapely, pygeoprocessing build 09-Jul-2018 11:55:44 Running setup.py install for pygeoprocessing: started build 09-Jul-2018 11:56:17 Running setup.py install for pygeoprocessing: finished with status 'done' build 09-Jul-2018 11:56:17 Successfully installed cython-0.28.4 pygeoprocessing-0.2.2 shapely-1.6.4.post1 build 09-Jul-2018 11:56:17 You are using pip version 9.0.3, however version 10.0.1 is available. build 09-Jul-2018 11:56:17 You should consider upgrading via the 'pip install --upgrade pip' command. build 09-Jul-2018 11:56:36 Removing intermediate container 1be86b17c39e build 09-Jul-2018 11:56:36 ---> f6d0c85b282e build 09-Jul-2018 11:56:36 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 09-Jul-2018 11:56:37 ---> Running in c0a23b0a93fc build 09-Jul-2018 11:56:37 Removing intermediate container c0a23b0a93fc build 09-Jul-2018 11:56:37 ---> 5423c5b3f716 build 09-Jul-2018 11:56:37 Step 6/8 : CMD ["extractor"] build 09-Jul-2018 11:56:37 ---> Running in 66f832b73d6d build 09-Jul-2018 11:56:38 Removing intermediate container 66f832b73d6d build 09-Jul-2018 11:56:38 ---> 29a9dde688df build 09-Jul-2018 11:56:38 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geotiff.metadata" MAIN_SCRIPT="ncsa.image.geotiff.py" build 09-Jul-2018 11:56:38 ---> Running in f7a269848e65 build 09-Jul-2018 11:56:38 Removing intermediate container f7a269848e65 build 09-Jul-2018 11:56:38 ---> f50505412f8f build 09-Jul-2018 11:56:38 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json /home/clowder/ build 09-Jul-2018 11:56:39 ---> 0e1cd7c0bbc8 build 09-Jul-2018 11:56:39 Successfully built 0e1cd7c0bbc8 build 09-Jul-2018 11:56:39 Successfully tagged 32019:latest build 09-Jul-2018 11:56:40 Untagged: 32019:latest build 09-Jul-2018 11:56:40 Sending build context to Docker daemon 1.348MB build 09-Jul-2018 11:56:40 build 09-Jul-2018 11:56:40 Step 1/8 : FROM clowder/pyclowder:2 build 09-Jul-2018 11:56:40 ---> b93e3777165c build 09-Jul-2018 11:56:40 Step 2/8 : MAINTAINER Yong Wook Kim build 09-Jul-2018 11:56:40 ---> Using cache build 09-Jul-2018 11:56:40 ---> ace05c4ca0f2 build 09-Jul-2018 11:56:40 Step 3/8 : COPY requirements.txt /home/clowder/ build 09-Jul-2018 11:56:40 ---> 21fda9b46db3 build 09-Jul-2018 11:56:40 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full && pip install --upgrade pip==9.0.3 && pip install --upgrade -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 09-Jul-2018 11:56:41 ---> Running in 1c4ec285f2cc build 09-Jul-2018 11:56:41 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 09-Jul-2018 11:56:41 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 09-Jul-2018 11:56:42 Get:3 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [83.5 kB] build 09-Jul-2018 11:56:42 Get:4 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [660 kB] build 09-Jul-2018 11:56:42 Get:5 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 09-Jul-2018 11:56:42 Get:6 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [452 kB] build 09-Jul-2018 11:56:42 Get:7 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3735 B] build 09-Jul-2018 11:56:42 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 09-Jul-2018 11:56:42 Get:9 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 09-Jul-2018 11:56:42 Get:10 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 09-Jul-2018 11:56:43 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 09-Jul-2018 11:56:43 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 09-Jul-2018 11:56:43 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 09-Jul-2018 11:56:43 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 09-Jul-2018 11:56:43 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [260 kB] build 09-Jul-2018 11:56:43 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1038 kB] build 09-Jul-2018 11:56:43 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 09-Jul-2018 11:56:43 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [825 kB] build 09-Jul-2018 11:56:43 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 09-Jul-2018 11:56:43 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7321 B] build 09-Jul-2018 11:56:43 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8088 B] build 09-Jul-2018 11:56:45 Fetched 25.3 MB in 4s (6163 kB/s) build 09-Jul-2018 11:56:47 Reading package lists... build 09-Jul-2018 11:56:48 Reading package lists... build 09-Jul-2018 11:56:49 Building dependency tree... build 09-Jul-2018 11:56:49 Reading state information... build 09-Jul-2018 11:56:49 The following additional packages will be installed: build 09-Jul-2018 11:56:49 fontconfig-config fonts-dejavu-core gcc-5-base krb5-locales libaec0 build 09-Jul-2018 11:56:49 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 09-Jul-2018 11:56:49 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 09-Jul-2018 11:56:49 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 09-Jul-2018 11:56:49 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 09-Jul-2018 11:56:49 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 09-Jul-2018 11:56:49 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 09-Jul-2018 11:56:49 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 09-Jul-2018 11:56:49 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 09-Jul-2018 11:56:49 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 09-Jul-2018 11:56:49 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 09-Jul-2018 11:56:49 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 09-Jul-2018 11:56:49 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 09-Jul-2018 11:56:49 libsasl2-modules-db libspatialite7 libstdc++6 libsuperlu4 libsz2 libtasn1-6 build 09-Jul-2018 11:56:49 libtiff5 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 build 09-Jul-2018 11:56:49 mysql-common odbcinst odbcinst1debian2 proj-bin proj-data python-numpy build 09-Jul-2018 11:56:49 sgml-base ucf xml-core build 09-Jul-2018 11:56:49 Suggested packages: build 09-Jul-2018 11:56:49 gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools build 09-Jul-2018 11:56:49 libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc odbc-postgresql build 09-Jul-2018 11:56:49 tdsodbc unixodbc-bin ogdi-bin poppler-data libsasl2-modules-otp build 09-Jul-2018 11:56:49 libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit build 09-Jul-2018 11:56:49 | libsasl2-modules-gssapi-heimdal p7zip-rar gcc gfortran python-dev build 09-Jul-2018 11:56:49 python-nose python-numpy-dbg python-numpy-doc sgml-base-doc debhelper build 09-Jul-2018 11:56:49 The following NEW packages will be installed: build 09-Jul-2018 11:56:49 file fontconfig-config fonts-dejavu-core gdal-bin krb5-locales libaec0 build 09-Jul-2018 11:56:49 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 09-Jul-2018 11:56:49 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 09-Jul-2018 11:56:49 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 09-Jul-2018 11:56:49 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 09-Jul-2018 11:56:49 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 09-Jul-2018 11:56:49 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 09-Jul-2018 11:56:49 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 09-Jul-2018 11:56:49 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 09-Jul-2018 11:56:49 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 09-Jul-2018 11:56:49 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 09-Jul-2018 11:56:49 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 09-Jul-2018 11:56:49 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 09-Jul-2018 11:56:49 libsasl2-modules-db libspatialite7 libsuperlu4 libsz2 libtasn1-6 libtiff5 build 09-Jul-2018 11:56:49 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 mysql-common build 09-Jul-2018 11:56:49 odbcinst odbcinst1debian2 p7zip-full proj-bin proj-data python-gdal build 09-Jul-2018 11:56:49 python-numpy sgml-base ucf xml-core build 09-Jul-2018 11:56:49 The following packages will be upgraded: build 09-Jul-2018 11:56:49 gcc-5-base libstdc++6 build 09-Jul-2018 11:56:49 2 upgraded, 92 newly installed, 0 to remove and 6 not upgraded. build 09-Jul-2018 11:56:49 Need to get 36.2 MB of archives. build 09-Jul-2018 11:56:49 After this operation, 146 MB of additional disk space will be used. build 09-Jul-2018 11:56:49 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 09-Jul-2018 11:56:49 Get:2 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3 [111 kB] build 09-Jul-2018 11:56:50 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 09-Jul-2018 11:56:50 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 09-Jul-2018 11:56:50 Get:5 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 09-Jul-2018 11:56:50 Get:6 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 09-Jul-2018 11:56:50 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 09-Jul-2018 11:56:50 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 09-Jul-2018 11:56:50 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 09-Jul-2018 11:56:50 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.1 [216 kB] build 09-Jul-2018 11:56:50 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.1 [21.2 kB] build 09-Jul-2018 11:56:50 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 09-Jul-2018 11:56:50 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 09-Jul-2018 11:56:50 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 09-Jul-2018 11:56:50 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 09-Jul-2018 11:56:50 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 09-Jul-2018 11:56:50 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 09-Jul-2018 11:56:50 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 09-Jul-2018 11:56:50 Get:19 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1 [116 kB] build 09-Jul-2018 11:56:50 Get:20 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 09-Jul-2018 11:56:50 Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 09-Jul-2018 11:56:50 Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 09-Jul-2018 11:56:50 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 09-Jul-2018 11:56:50 Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 09-Jul-2018 11:56:50 Get:25 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libk5crypto3 amd64 1.13.2+dfsg-5ubuntu2 [81.2 kB] build 09-Jul-2018 11:56:50 Get:26 http://archive.ubuntu.com/ubuntu xenial/main amd64 libkeyutils1 amd64 1.5.9-8ubuntu1 [9904 B] build 09-Jul-2018 11:56:50 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-3 amd64 1.13.2+dfsg-5ubuntu2 [273 kB] build 09-Jul-2018 11:56:50 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi-krb5-2 amd64 1.13.2+dfsg-5ubuntu2 [120 kB] build 09-Jul-2018 11:56:50 Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhcrypto4-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [85.0 kB] build 09-Jul-2018 11:56:50 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimbase1-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [29.3 kB] build 09-Jul-2018 11:56:50 Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwind0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [47.8 kB] build 09-Jul-2018 11:56:50 Get:32 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhx509-5-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [107 kB] build 09-Jul-2018 11:56:50 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 09-Jul-2018 11:56:50 Get:34 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 09-Jul-2018 11:56:50 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 09-Jul-2018 11:56:50 Get:36 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 09-Jul-2018 11:56:50 Get:37 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 09-Jul-2018 11:56:50 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu3.3 [161 kB] build 09-Jul-2018 11:56:50 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d-1ubuntu0.1 [54.4 kB] build 09-Jul-2018 11:56:50 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcurl3-gnutls amd64 7.47.0-1ubuntu2.8 [185 kB] build 09-Jul-2018 11:56:51 Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 09-Jul-2018 11:56:51 Get:42 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules amd64 2.1.26.dfsg1-14build1 [47.5 kB] build 09-Jul-2018 11:56:51 Get:43 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.5 [697 kB] build 09-Jul-2018 11:56:51 Get:44 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 09-Jul-2018 11:56:51 Get:45 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 09-Jul-2018 11:56:51 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 09-Jul-2018 11:56:51 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB] build 09-Jul-2018 11:56:51 Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB] build 09-Jul-2018 11:56:51 Get:49 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 09-Jul-2018 11:56:51 Get:50 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 09-Jul-2018 11:56:51 Get:51 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarmadillo6 amd64 1:6.500.5+dfsg-1 [75.2 kB] build 09-Jul-2018 11:56:51 Get:52 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 09-Jul-2018 11:56:51 Get:53 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 09-Jul-2018 11:56:51 Get:54 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libepsilon1 amd64 0.9.2-3ubuntu1 [41.0 kB] build 09-Jul-2018 11:56:51 Get:55 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libfreexl1 amd64 1.0.2-1 [33.6 kB] build 09-Jul-2018 11:56:51 Get:56 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-3.5.0 amd64 3.5.0-1ubuntu2 [477 kB] build 09-Jul-2018 11:56:51 Get:57 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-c1v5 amd64 3.5.0-1ubuntu2 [52.4 kB] build 09-Jul-2018 11:56:51 Get:58 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgif7 amd64 5.1.4-0.3~16.04 [30.5 kB] build 09-Jul-2018 11:56:51 Get:59 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] build 09-Jul-2018 11:56:51 Get:60 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf4-0-alt amd64 4.2.10-3.2 [264 kB] build 09-Jul-2018 11:56:51 Get:61 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libaec0 amd64 0.3.2-1 [18.0 kB] build 09-Jul-2018 11:56:51 Get:62 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsz2 amd64 0.3.2-1 [5048 B] build 09-Jul-2018 11:56:51 Get:63 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf5-10 amd64 1.8.16+docs-4ubuntu1 [995 kB] build 09-Jul-2018 11:56:51 Get:64 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjasper1 amd64 1.900.1-debian1-2.4ubuntu1.2 [131 kB] build 09-Jul-2018 11:56:51 Get:65 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libminizip1 amd64 1.1-8 [20.3 kB] build 09-Jul-2018 11:56:51 Get:66 http://archive.ubuntu.com/ubuntu xenial/universe amd64 liburiparser1 amd64 0.8.4-1 [38.0 kB] build 09-Jul-2018 11:56:51 Get:67 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlbase1 amd64 1.3.0-1 [43.9 kB] build 09-Jul-2018 11:56:51 Get:68 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmldom1 amd64 1.3.0-1 [175 kB] build 09-Jul-2018 11:56:51 Get:69 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlengine1 amd64 1.3.0-1 [77.1 kB] build 09-Jul-2018 11:56:51 Get:70 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 mysql-common all 5.7.22-0ubuntu0.16.04.1 [15.4 kB] build 09-Jul-2018 11:56:51 Get:71 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmysqlclient20 amd64 5.7.22-0ubuntu0.16.04.1 [809 kB] build 09-Jul-2018 11:56:51 Get:72 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libnetcdf11 amd64 1:4.4.0-2 [286 kB] build 09-Jul-2018 11:56:51 Get:73 http://archive.ubuntu.com/ubuntu xenial/main amd64 libltdl7 amd64 2.4.6-0.1 [38.3 kB] build 09-Jul-2018 11:56:51 Get:74 http://archive.ubuntu.com/ubuntu xenial/main amd64 libodbc1 amd64 2.3.1-4.1 [180 kB] build 09-Jul-2018 11:56:51 Get:75 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-data all 4.9.2-2 [4004 kB] build 09-Jul-2018 11:56:52 Get:76 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libproj9 amd64 4.9.2-2 [143 kB] build 09-Jul-2018 11:56:52 Get:77 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libogdi3.2 amd64 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build 09-Jul-2018 11:56:52 Get:85 http://archive.ubuntu.com/ubuntu xenial/main amd64 libwebp5 amd64 0.4.4-1 [165 kB] build 09-Jul-2018 11:56:52 Get:86 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libxerces-c3.1 amd64 3.1.3+debian-1 [842 kB] build 09-Jul-2018 11:56:52 Get:87 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst amd64 2.3.1-4.1 [13.1 kB] build 09-Jul-2018 11:56:52 Get:88 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst1debian2 amd64 2.3.1-4.1 [41.1 kB] build 09-Jul-2018 11:56:52 Get:89 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgdal1i amd64 1.11.3+dfsg-3build2 [4013 kB] build 09-Jul-2018 11:56:52 Get:90 http://archive.ubuntu.com/ubuntu xenial/universe amd64 gdal-bin amd64 1.11.3+dfsg-3build2 [226 kB] build 09-Jul-2018 11:56:52 Get:91 http://archive.ubuntu.com/ubuntu xenial/universe amd64 p7zip-full amd64 9.20.1~dfsg.1-4.2 [919 kB] build 09-Jul-2018 11:56:52 Get:92 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-numpy amd64 1:1.11.0-1ubuntu1 [1763 kB] build 09-Jul-2018 11:56:52 Get:93 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-gdal amd64 1.11.3+dfsg-3build2 [423 kB] build 09-Jul-2018 11:56:52 Get:94 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-bin amd64 4.9.2-2 [31.3 kB] build 09-Jul-2018 11:56:52 debconf: delaying package configuration, since apt-utils is not installed build 09-Jul-2018 11:56:52 Fetched 36.2 MB in 2s (12.3 MB/s) build 09-Jul-2018 11:56:53 Selecting previously unselected package sgml-base. build 09-Jul-2018 11:56:53 (Reading database ... build 09-Jul-2018 11:56:53 (Reading database ... 5% build 09-Jul-2018 11:56:53 (Reading database ... 10% build 09-Jul-2018 11:56:53 (Reading database ... 15% build 09-Jul-2018 11:56:53 (Reading database ... 20% build 09-Jul-2018 11:56:53 (Reading database ... 25% build 09-Jul-2018 11:56:53 (Reading database ... 30% build 09-Jul-2018 11:56:53 (Reading database ... 35% build 09-Jul-2018 11:56:53 (Reading database ... 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proj-data. build 09-Jul-2018 11:57:36 Preparing to unpack .../proj-data_4.9.2-2_all.deb ... build 09-Jul-2018 11:57:36 Unpacking proj-data (4.9.2-2) ... build 09-Jul-2018 11:57:37 Selecting previously unselected package libproj9. build 09-Jul-2018 11:57:37 Preparing to unpack .../libproj9_4.9.2-2_amd64.deb ... build 09-Jul-2018 11:57:37 Unpacking libproj9 (4.9.2-2) ... build 09-Jul-2018 11:57:38 Selecting previously unselected package libogdi3.2. build 09-Jul-2018 11:57:38 Preparing to unpack .../libogdi3.2_3.2.0~beta2-7.1build1_amd64.deb ... build 09-Jul-2018 11:57:38 Unpacking libogdi3.2 (3.2.0~beta2-7.1build1) ... build 09-Jul-2018 11:57:38 Selecting previously unselected package libopenjp2-7:amd64. build 09-Jul-2018 11:57:38 Preparing to unpack .../libopenjp2-7_2.1.0-2.1ubuntu0.1_amd64.deb ... build 09-Jul-2018 11:57:38 Unpacking libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 09-Jul-2018 11:57:38 Selecting previously unselected package libfreetype6:amd64. build 09-Jul-2018 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11:57:48 Setting up sgml-base (1.26+nmu4ubuntu1) ... build 09-Jul-2018 11:57:48 Setting up libjpeg-turbo8:amd64 (1.4.2-0ubuntu3) ... build 09-Jul-2018 11:57:48 Setting up liblcms2-2:amd64 (2.6-3ubuntu2) ... build 09-Jul-2018 11:57:48 Setting up libblas-common (3.6.0-2ubuntu2) ... build 09-Jul-2018 11:57:49 Setting up libblas3 (3.6.0-2ubuntu2) ... build 09-Jul-2018 11:57:49 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 09-Jul-2018 11:57:49 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 09-Jul-2018 11:57:49 Setting up libjbig0:amd64 (2.1-3.1) ... build 09-Jul-2018 11:57:49 Setting up libmagic1:amd64 (1:5.25-2ubuntu1.1) ... build 09-Jul-2018 11:57:49 Setting up file (1:5.25-2ubuntu1.1) ... build 09-Jul-2018 11:57:50 Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ... build 09-Jul-2018 11:57:50 Setting up libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ... build 09-Jul-2018 11:57:50 Setting up libhogweed4:amd64 (3.2-1ubuntu0.16.04.1) ... build 09-Jul-2018 11:57:50 Setting up libidn11:amd64 (1.32-3ubuntu1.2) ... build 09-Jul-2018 11:57:50 Setting up libp11-kit0:amd64 (0.23.2-5~ubuntu16.04.1) ... build 09-Jul-2018 11:57:50 Setting up libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 09-Jul-2018 11:57:51 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 09-Jul-2018 11:57:51 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1) ... build 09-Jul-2018 11:57:51 Setting up ucf (3.0036) ... build 09-Jul-2018 11:57:51 debconf: unable to initialize frontend: Dialog build 09-Jul-2018 11:57:51 debconf: (TERM is not set, so the dialog frontend is not usable.) build 09-Jul-2018 11:57:51 debconf: falling back to frontend: Readline build 09-Jul-2018 11:57:51 debconf: unable to initialize frontend: Readline build 09-Jul-2018 11:57:51 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) build 09-Jul-2018 11:57:51 debconf: falling back to frontend: Teletype build 09-Jul-2018 11:57:51 Setting up krb5-locales (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 11:57:51 Setting up libroken18-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:57:51 Setting up libasn1-8-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:57:52 Setting up libkrb5support0:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 11:57:52 Setting up libk5crypto3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 11:57:52 Setting up libkeyutils1:amd64 (1.5.9-8ubuntu1) ... build 09-Jul-2018 11:57:52 Setting up libkrb5-3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 11:57:52 Setting up libgssapi-krb5-2:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 11:57:52 Setting up libhcrypto4-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:57:52 Setting up libheimbase1-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:57:53 Setting up libwind0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:57:53 Setting up libhx509-5-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:57:53 Setting up libkrb5-26-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:57:53 Setting up libheimntlm0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:57:53 Setting up libgssapi3-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:57:53 Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 11:57:53 Setting up libsasl2-2:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 11:57:53 Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu3.3) ... build 09-Jul-2018 11:57:54 Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d-1ubuntu0.1) ... build 09-Jul-2018 11:57:54 Setting up libcurl3-gnutls:amd64 (7.47.0-1ubuntu2.8) ... build 09-Jul-2018 11:57:54 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 09-Jul-2018 11:57:54 Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 11:57:54 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.5) ... build 09-Jul-2018 11:57:54 Setting up xml-core (0.13+nmu2) ... build 09-Jul-2018 11:57:55 Setting up fonts-dejavu-core (2.35-1) ... build 09-Jul-2018 11:57:56 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 09-Jul-2018 11:57:58 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:57:58 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:57:58 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 09-Jul-2018 11:57:58 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 09-Jul-2018 11:57:58 Setting up libarpack2 (3.3.0-1build2) ... build 09-Jul-2018 11:57:58 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 09-Jul-2018 11:57:58 Setting up libdap17v5:amd64 (3.15.1-7) ... build 09-Jul-2018 11:57:58 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 09-Jul-2018 11:57:59 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 09-Jul-2018 11:57:59 Setting up libfreexl1:amd64 (1.0.2-1) ... build 09-Jul-2018 11:57:59 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 09-Jul-2018 11:57:59 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 09-Jul-2018 11:57:59 Setting up libgif7:amd64 (5.1.4-0.3~16.04) ... build 09-Jul-2018 11:57:59 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 09-Jul-2018 11:58:00 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 09-Jul-2018 11:58:00 Setting up libaec0:amd64 (0.3.2-1) ... build 09-Jul-2018 11:58:00 Setting up libsz2:amd64 (0.3.2-1) ... build 09-Jul-2018 11:58:00 Setting up libhdf5-10:amd64 (1.8.16+docs-4ubuntu1) ... build 09-Jul-2018 11:58:00 Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.2) ... build 09-Jul-2018 11:58:00 Setting up libminizip1:amd64 (1.1-8) ... build 09-Jul-2018 11:58:00 Setting up liburiparser1:amd64 (0.8.4-1) ... build 09-Jul-2018 11:58:01 Setting up libkmlbase1:amd64 (1.3.0-1) ... build 09-Jul-2018 11:58:01 Setting up libkmldom1:amd64 (1.3.0-1) ... build 09-Jul-2018 11:58:01 Setting up libkmlengine1:amd64 (1.3.0-1) ... build 09-Jul-2018 11:58:01 Setting up mysql-common (5.7.22-0ubuntu0.16.04.1) ... build 09-Jul-2018 11:58:01 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 09-Jul-2018 11:58:01 Setting up libmysqlclient20:amd64 (5.7.22-0ubuntu0.16.04.1) ... build 09-Jul-2018 11:58:01 Setting up libnetcdf11 (1:4.4.0-2) ... build 09-Jul-2018 11:58:02 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 09-Jul-2018 11:58:02 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 09-Jul-2018 11:58:02 Setting up proj-data (4.9.2-2) ... build 09-Jul-2018 11:58:02 Setting up libproj9 (4.9.2-2) ... build 09-Jul-2018 11:58:02 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 09-Jul-2018 11:58:02 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 09-Jul-2018 11:58:02 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 09-Jul-2018 11:58:03 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 09-Jul-2018 11:58:03 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 09-Jul-2018 11:58:03 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 09-Jul-2018 11:58:03 Setting up libpq5:amd64 (9.5.13-0ubuntu0.16.04) ... build 09-Jul-2018 11:58:03 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 09-Jul-2018 11:58:03 Setting up libwebp5:amd64 (0.4.4-1) ... build 09-Jul-2018 11:58:03 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 09-Jul-2018 11:58:03 Setting up p7zip-full (9.20.1~dfsg.1-4.2) ... build 09-Jul-2018 11:58:04 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 09-Jul-2018 11:58:07 Setting up proj-bin (4.9.2-2) ... build 09-Jul-2018 11:58:07 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 09-Jul-2018 11:58:07 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 09-Jul-2018 11:58:08 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 09-Jul-2018 11:58:08 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 09-Jul-2018 11:58:10 Setting up odbcinst (2.3.1-4.1) ... build 09-Jul-2018 11:58:10 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 09-Jul-2018 11:58:10 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 09-Jul-2018 11:58:12 Collecting pip==9.0.3 build 09-Jul-2018 11:58:12 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 09-Jul-2018 11:58:13 Installing collected packages: pip build 09-Jul-2018 11:58:13 Found existing installation: pip 8.1.1 build 09-Jul-2018 11:58:13 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 09-Jul-2018 11:58:13 Successfully installed pip-9.0.3 build 09-Jul-2018 11:58:13 You are using pip version 9.0.3, however version 10.0.1 is available. build 09-Jul-2018 11:58:13 You should consider upgrading via the 'pip install --upgrade pip' command. build 09-Jul-2018 11:58:14 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 09-Jul-2018 11:58:14 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 09-Jul-2018 11:58:15 Collecting pika==0.10.0 (from -r /home/clowder/requirements.txt (line 2)) build 09-Jul-2018 11:58:15 Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB) build 09-Jul-2018 11:58:15 Collecting requests==2.10.0 (from -r /home/clowder/requirements.txt (line 3)) build 09-Jul-2018 11:58:15 Downloading https://files.pythonhosted.org/packages/99/b4/63d99ba8e189c47d906b43bae18af4396e336f2b1bfec86af31efe2d2cb8/requests-2.10.0-py2.py3-none-any.whl (506kB) build 09-Jul-2018 11:58:15 Collecting wheel==0.24.0 (from -r /home/clowder/requirements.txt (line 4)) build 09-Jul-2018 11:58:16 Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB) build 09-Jul-2018 11:58:16 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 09-Jul-2018 11:58:16 Downloading https://files.pythonhosted.org/packages/fd/ce/aa4a385e3e9fd351737fd2b07edaa56e7a730448465aceda6b35086a0d9b/httplib2-0.11.3.tar.gz (215kB) build 09-Jul-2018 11:58:16 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 09-Jul-2018 11:58:17 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 09-Jul-2018 11:58:18 Installing collected packages: httplib2, gisdata, gsconfig, pika, requests, wheel build 09-Jul-2018 11:58:18 Running setup.py install for httplib2: started build 09-Jul-2018 11:58:18 Running setup.py install for httplib2: finished with status 'done' build 09-Jul-2018 11:58:18 Running setup.py install for gisdata: started build 09-Jul-2018 11:58:19 Running setup.py install for gisdata: finished with status 'done' build 09-Jul-2018 11:58:19 Running setup.py install for gsconfig: started build 09-Jul-2018 11:58:19 Running setup.py install for gsconfig: finished with status 'done' build 09-Jul-2018 11:58:19 Found existing installation: pika 0.11.2 build 09-Jul-2018 11:58:20 Uninstalling pika-0.11.2: build 09-Jul-2018 11:58:21 Successfully uninstalled pika-0.11.2 build 09-Jul-2018 11:58:21 Found existing installation: requests 2.18.4 build 09-Jul-2018 11:58:21 Uninstalling requests-2.18.4: build 09-Jul-2018 11:58:22 Successfully uninstalled requests-2.18.4 build 09-Jul-2018 11:58:23 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.11.3 pika-0.10.0 requests-2.10.0 wheel-0.24.0 build 09-Jul-2018 11:58:23 You are using pip version 9.0.3, however version 10.0.1 is available. build 09-Jul-2018 11:58:23 You should consider upgrading via the 'pip install --upgrade pip' command. build 09-Jul-2018 11:58:28 Removing intermediate container 1c4ec285f2cc build 09-Jul-2018 11:58:28 ---> 348ef168c9d6 build 09-Jul-2018 11:58:28 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 09-Jul-2018 11:58:29 ---> Running in b08664460e57 build 09-Jul-2018 11:58:29 Removing intermediate container b08664460e57 build 09-Jul-2018 11:58:29 ---> c03e419642f8 build 09-Jul-2018 11:58:29 Step 6/8 : CMD ["extractor"] build 09-Jul-2018 11:58:29 ---> Running in 954d8e9e13e7 build 09-Jul-2018 11:58:29 Removing intermediate container 954d8e9e13e7 build 09-Jul-2018 11:58:29 ---> 1a525106f002 build 09-Jul-2018 11:58:29 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geotiff.preview" MAIN_SCRIPT="ncsa.geo.tiff.py" GEOSERVER_URL="" GEOSERVER_USERNAME="admin" GEOSERVER_PASSWORD="geoserver" GEOSERVER_WORKSPACE="clowder" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 09-Jul-2018 11:58:30 ---> Running in a3a7dcbb4a26 build 09-Jul-2018 11:58:30 Removing intermediate container a3a7dcbb4a26 build 09-Jul-2018 11:58:30 ---> c4e05ba7ee16 build 09-Jul-2018 11:58:30 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json rasterTemplate.xml /home/clowder/ build 09-Jul-2018 11:58:31 ---> 0f0466b11368 build 09-Jul-2018 11:58:31 Successfully built 0f0466b11368 build 09-Jul-2018 11:58:31 Successfully tagged 32019:latest build 09-Jul-2018 11:58:32 Untagged: 32019:latest build 09-Jul-2018 11:58:32 Sending build context to Docker daemon 161.8kB build 09-Jul-2018 11:58:32 build 09-Jul-2018 11:58:32 Step 1/8 : FROM clowder/pyclowder:2 build 09-Jul-2018 11:58:32 ---> b93e3777165c build 09-Jul-2018 11:58:32 Step 2/8 : MAINTAINER Yong Wook Kim build 09-Jul-2018 11:58:32 ---> Using cache build 09-Jul-2018 11:58:32 ---> ace05c4ca0f2 build 09-Jul-2018 11:58:32 Step 3/8 : COPY requirements.txt /home/clowder/ build 09-Jul-2018 11:58:32 ---> cd05f064f5df build 09-Jul-2018 11:58:32 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full && pip install --upgrade pip==9.0.3 && pip install --upgrade -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 09-Jul-2018 11:58:33 ---> Running in a1280944ac2a build 09-Jul-2018 11:58:33 Get:1 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 09-Jul-2018 11:58:33 Get:2 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 09-Jul-2018 11:58:34 Get:3 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 09-Jul-2018 11:58:34 Get:4 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [83.5 kB] build 09-Jul-2018 11:58:34 Get:5 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 09-Jul-2018 11:58:34 Get:6 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [660 kB] build 09-Jul-2018 11:58:34 Get:7 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 09-Jul-2018 11:58:34 Get:8 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 09-Jul-2018 11:58:35 Get:9 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [452 kB] build 09-Jul-2018 11:58:35 Get:10 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3735 B] build 09-Jul-2018 11:58:35 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 09-Jul-2018 11:58:35 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 09-Jul-2018 11:58:35 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 09-Jul-2018 11:58:35 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 09-Jul-2018 11:58:35 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [260 kB] build 09-Jul-2018 11:58:35 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1038 kB] build 09-Jul-2018 11:58:35 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 09-Jul-2018 11:58:35 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [825 kB] build 09-Jul-2018 11:58:36 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 09-Jul-2018 11:58:36 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7321 B] build 09-Jul-2018 11:58:36 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8088 B] build 09-Jul-2018 11:58:38 Fetched 25.3 MB in 4s (5829 kB/s) build 09-Jul-2018 11:58:39 Reading package lists... build 09-Jul-2018 11:58:41 Reading package lists... build 09-Jul-2018 11:58:41 Building dependency tree... build 09-Jul-2018 11:58:41 Reading state information... build 09-Jul-2018 11:58:41 The following additional packages will be installed: build 09-Jul-2018 11:58:41 fontconfig-config fonts-dejavu-core gcc-5-base krb5-locales libaec0 build 09-Jul-2018 11:58:41 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 09-Jul-2018 11:58:41 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 09-Jul-2018 11:58:41 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 09-Jul-2018 11:58:41 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 09-Jul-2018 11:58:41 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 09-Jul-2018 11:58:41 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 09-Jul-2018 11:58:41 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 09-Jul-2018 11:58:41 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 09-Jul-2018 11:58:41 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 09-Jul-2018 11:58:41 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 09-Jul-2018 11:58:41 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 09-Jul-2018 11:58:41 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 09-Jul-2018 11:58:41 libsasl2-modules-db libspatialite7 libstdc++6 libsuperlu4 libsz2 libtasn1-6 build 09-Jul-2018 11:58:41 libtiff5 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 build 09-Jul-2018 11:58:41 mysql-common odbcinst odbcinst1debian2 proj-bin proj-data python-numpy build 09-Jul-2018 11:58:41 sgml-base ucf xml-core build 09-Jul-2018 11:58:41 Suggested packages: build 09-Jul-2018 11:58:41 gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools build 09-Jul-2018 11:58:41 libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc odbc-postgresql build 09-Jul-2018 11:58:41 tdsodbc unixodbc-bin ogdi-bin poppler-data libsasl2-modules-otp build 09-Jul-2018 11:58:41 libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit build 09-Jul-2018 11:58:41 | libsasl2-modules-gssapi-heimdal p7zip-rar gcc gfortran python-dev build 09-Jul-2018 11:58:41 python-nose python-numpy-dbg python-numpy-doc sgml-base-doc debhelper build 09-Jul-2018 11:58:41 The following NEW packages will be installed: build 09-Jul-2018 11:58:41 file fontconfig-config fonts-dejavu-core gdal-bin krb5-locales libaec0 build 09-Jul-2018 11:58:41 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 09-Jul-2018 11:58:41 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 09-Jul-2018 11:58:41 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 09-Jul-2018 11:58:41 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 09-Jul-2018 11:58:41 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 09-Jul-2018 11:58:41 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 09-Jul-2018 11:58:41 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 09-Jul-2018 11:58:41 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 09-Jul-2018 11:58:41 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 09-Jul-2018 11:58:41 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 09-Jul-2018 11:58:41 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 09-Jul-2018 11:58:41 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 09-Jul-2018 11:58:41 libsasl2-modules-db libspatialite7 libsuperlu4 libsz2 libtasn1-6 libtiff5 build 09-Jul-2018 11:58:41 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 mysql-common build 09-Jul-2018 11:58:41 odbcinst odbcinst1debian2 p7zip-full proj-bin proj-data python-gdal build 09-Jul-2018 11:58:41 python-numpy sgml-base ucf xml-core build 09-Jul-2018 11:58:41 The following packages will be upgraded: build 09-Jul-2018 11:58:41 gcc-5-base libstdc++6 build 09-Jul-2018 11:58:42 2 upgraded, 92 newly installed, 0 to remove and 6 not upgraded. build 09-Jul-2018 11:58:42 Need to get 36.2 MB of archives. build 09-Jul-2018 11:58:42 After this operation, 146 MB of additional disk space will be used. build 09-Jul-2018 11:58:42 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 09-Jul-2018 11:58:42 Get:2 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3 [111 kB] build 09-Jul-2018 11:58:42 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 09-Jul-2018 11:58:42 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 09-Jul-2018 11:58:42 Get:5 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 09-Jul-2018 11:58:42 Get:6 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 09-Jul-2018 11:58:42 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 09-Jul-2018 11:58:42 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 09-Jul-2018 11:58:42 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 09-Jul-2018 11:58:42 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.1 [216 kB] build 09-Jul-2018 11:58:42 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.1 [21.2 kB] build 09-Jul-2018 11:58:42 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 09-Jul-2018 11:58:43 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 09-Jul-2018 11:58:43 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 09-Jul-2018 11:58:43 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 09-Jul-2018 11:58:43 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 09-Jul-2018 11:58:43 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 09-Jul-2018 11:58:43 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 09-Jul-2018 11:58:43 Get:19 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1 [116 kB] build 09-Jul-2018 11:58:43 Get:20 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 09-Jul-2018 11:58:43 Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 09-Jul-2018 11:58:43 Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 09-Jul-2018 11:58:43 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 09-Jul-2018 11:58:43 Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 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1.7~git20150920+dfsg-4ubuntu1.16.04.1 [47.8 kB] build 09-Jul-2018 11:58:43 Get:32 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhx509-5-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [107 kB] build 09-Jul-2018 11:58:43 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 09-Jul-2018 11:58:43 Get:34 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 09-Jul-2018 11:58:43 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 09-Jul-2018 11:58:43 Get:36 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 09-Jul-2018 11:58:43 Get:37 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 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amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 09-Jul-2018 11:58:43 Get:53 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 09-Jul-2018 11:58:44 Get:54 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libepsilon1 amd64 0.9.2-3ubuntu1 [41.0 kB] build 09-Jul-2018 11:58:44 Get:55 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libfreexl1 amd64 1.0.2-1 [33.6 kB] build 09-Jul-2018 11:58:44 Get:56 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-3.5.0 amd64 3.5.0-1ubuntu2 [477 kB] build 09-Jul-2018 11:58:44 Get:57 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-c1v5 amd64 3.5.0-1ubuntu2 [52.4 kB] build 09-Jul-2018 11:58:44 Get:58 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgif7 amd64 5.1.4-0.3~16.04 [30.5 kB] build 09-Jul-2018 11:58:44 Get:59 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] build 09-Jul-2018 11:58:44 Get:60 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09-Jul-2018 11:58:51 Preparing to unpack .../libmagic1_1%3a5.25-2ubuntu1.1_amd64.deb ... build 09-Jul-2018 11:58:51 Unpacking libmagic1:amd64 (1:5.25-2ubuntu1.1) ... build 09-Jul-2018 11:58:52 Selecting previously unselected package file. build 09-Jul-2018 11:58:52 Preparing to unpack .../file_1%3a5.25-2ubuntu1.1_amd64.deb ... build 09-Jul-2018 11:58:52 Unpacking file (1:5.25-2ubuntu1.1) ... build 09-Jul-2018 11:58:52 Selecting previously unselected package libgmp10:amd64. build 09-Jul-2018 11:58:52 Preparing to unpack .../libgmp10_2%3a6.1.0+dfsg-2_amd64.deb ... build 09-Jul-2018 11:58:52 Unpacking libgmp10:amd64 (2:6.1.0+dfsg-2) ... build 09-Jul-2018 11:58:53 Selecting previously unselected package libnettle6:amd64. build 09-Jul-2018 11:58:53 Preparing to unpack .../libnettle6_3.2-1ubuntu0.16.04.1_amd64.deb ... build 09-Jul-2018 11:58:53 Unpacking libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ... build 09-Jul-2018 11:58:53 Selecting previously unselected package libhogweed4:amd64. build 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unselected package libodbc1:amd64. build 09-Jul-2018 11:59:28 Preparing to unpack .../libodbc1_2.3.1-4.1_amd64.deb ... build 09-Jul-2018 11:59:28 Unpacking libodbc1:amd64 (2.3.1-4.1) ... build 09-Jul-2018 11:59:28 Selecting previously unselected package proj-data. build 09-Jul-2018 11:59:28 Preparing to unpack .../proj-data_4.9.2-2_all.deb ... build 09-Jul-2018 11:59:28 Unpacking proj-data (4.9.2-2) ... build 09-Jul-2018 11:59:30 Selecting previously unselected package libproj9. build 09-Jul-2018 11:59:30 Preparing to unpack .../libproj9_4.9.2-2_amd64.deb ... build 09-Jul-2018 11:59:30 Unpacking libproj9 (4.9.2-2) ... build 09-Jul-2018 11:59:31 Selecting previously unselected package libogdi3.2. build 09-Jul-2018 11:59:31 Preparing to unpack .../libogdi3.2_3.2.0~beta2-7.1build1_amd64.deb ... build 09-Jul-2018 11:59:31 Unpacking libogdi3.2 (3.2.0~beta2-7.1build1) ... build 09-Jul-2018 11:59:31 Selecting previously unselected package libopenjp2-7:amd64. build 09-Jul-2018 11:59:31 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package libpoppler58:amd64. build 09-Jul-2018 11:59:33 Preparing to unpack .../libpoppler58_0.41.0-0ubuntu1.7_amd64.deb ... build 09-Jul-2018 11:59:33 Unpacking libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 09-Jul-2018 11:59:33 Selecting previously unselected package libpq5:amd64. build 09-Jul-2018 11:59:33 Preparing to unpack .../libpq5_9.5.13-0ubuntu0.16.04_amd64.deb ... build 09-Jul-2018 11:59:33 Unpacking libpq5:amd64 (9.5.13-0ubuntu0.16.04) ... build 09-Jul-2018 11:59:34 Selecting previously unselected package libspatialite7:amd64. build 09-Jul-2018 11:59:34 Preparing to unpack .../libspatialite7_4.3.0a-5_amd64.deb ... build 09-Jul-2018 11:59:34 Unpacking libspatialite7:amd64 (4.3.0a-5) ... build 09-Jul-2018 11:59:35 Selecting previously unselected package libwebp5:amd64. build 09-Jul-2018 11:59:35 Preparing to unpack .../libwebp5_0.4.4-1_amd64.deb ... build 09-Jul-2018 11:59:35 Unpacking libwebp5:amd64 (0.4.4-1) ... build 09-Jul-2018 11:59:35 Selecting previously unselected package libxerces-c3.1:amd64. build 09-Jul-2018 11:59:35 Preparing to unpack .../libxerces-c3.1_3.1.3+debian-1_amd64.deb ... build 09-Jul-2018 11:59:35 Unpacking libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 09-Jul-2018 11:59:36 Selecting previously unselected package odbcinst. build 09-Jul-2018 11:59:36 Preparing to unpack .../odbcinst_2.3.1-4.1_amd64.deb ... build 09-Jul-2018 11:59:36 Unpacking odbcinst (2.3.1-4.1) ... build 09-Jul-2018 11:59:36 Selecting previously unselected package odbcinst1debian2:amd64. build 09-Jul-2018 11:59:36 Preparing to unpack .../odbcinst1debian2_2.3.1-4.1_amd64.deb ... build 09-Jul-2018 11:59:37 Unpacking odbcinst1debian2:amd64 (2.3.1-4.1) ... build 09-Jul-2018 11:59:37 Selecting previously unselected package libgdal1i. build 09-Jul-2018 11:59:37 Preparing to unpack .../libgdal1i_1.11.3+dfsg-3build2_amd64.deb ... build 09-Jul-2018 11:59:37 Unpacking libgdal1i (1.11.3+dfsg-3build2) ... build 09-Jul-2018 11:59:38 Selecting previously unselected package gdal-bin. build 09-Jul-2018 11:59:38 Preparing to unpack .../gdal-bin_1.11.3+dfsg-3build2_amd64.deb ... build 09-Jul-2018 11:59:38 Unpacking gdal-bin (1.11.3+dfsg-3build2) ... build 09-Jul-2018 11:59:38 Selecting previously unselected package p7zip-full. build 09-Jul-2018 11:59:38 Preparing to unpack .../p7zip-full_9.20.1~dfsg.1-4.2_amd64.deb ... build 09-Jul-2018 11:59:38 Unpacking p7zip-full (9.20.1~dfsg.1-4.2) ... build 09-Jul-2018 11:59:39 Selecting previously unselected package python-numpy. build 09-Jul-2018 11:59:39 Preparing to unpack .../python-numpy_1%3a1.11.0-1ubuntu1_amd64.deb ... build 09-Jul-2018 11:59:39 Unpacking python-numpy (1:1.11.0-1ubuntu1) ... build 09-Jul-2018 11:59:40 Selecting previously unselected package python-gdal. build 09-Jul-2018 11:59:40 Preparing to unpack .../python-gdal_1.11.3+dfsg-3build2_amd64.deb ... build 09-Jul-2018 11:59:40 Unpacking python-gdal (1.11.3+dfsg-3build2) ... build 09-Jul-2018 11:59:41 Selecting previously unselected package proj-bin. build 09-Jul-2018 11:59:41 Preparing to unpack .../proj-bin_4.9.2-2_amd64.deb ... build 09-Jul-2018 11:59:41 Unpacking proj-bin (4.9.2-2) ... build 09-Jul-2018 11:59:41 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 09-Jul-2018 11:59:41 Setting up sgml-base (1.26+nmu4ubuntu1) ... build 09-Jul-2018 11:59:41 Setting up libjpeg-turbo8:amd64 (1.4.2-0ubuntu3) ... build 09-Jul-2018 11:59:41 Setting up liblcms2-2:amd64 (2.6-3ubuntu2) ... build 09-Jul-2018 11:59:42 Setting up libblas-common (3.6.0-2ubuntu2) ... build 09-Jul-2018 11:59:42 Setting up libblas3 (3.6.0-2ubuntu2) ... build 09-Jul-2018 11:59:42 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 09-Jul-2018 11:59:42 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 09-Jul-2018 11:59:42 Setting up libjbig0:amd64 (2.1-3.1) ... build 09-Jul-2018 11:59:42 Setting up libmagic1:amd64 (1:5.25-2ubuntu1.1) ... build 09-Jul-2018 11:59:42 Setting up file (1:5.25-2ubuntu1.1) ... build 09-Jul-2018 11:59:42 Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ... build 09-Jul-2018 11:59:43 Setting up libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ... build 09-Jul-2018 11:59:43 Setting up libhogweed4:amd64 (3.2-1ubuntu0.16.04.1) ... build 09-Jul-2018 11:59:43 Setting up libidn11:amd64 (1.32-3ubuntu1.2) ... build 09-Jul-2018 11:59:43 Setting up libp11-kit0:amd64 (0.23.2-5~ubuntu16.04.1) ... build 09-Jul-2018 11:59:43 Setting up libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 09-Jul-2018 11:59:43 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 09-Jul-2018 11:59:43 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1) ... build 09-Jul-2018 11:59:44 Setting up ucf (3.0036) ... build 09-Jul-2018 11:59:44 debconf: unable to initialize frontend: Dialog build 09-Jul-2018 11:59:44 debconf: (TERM is not set, so the dialog frontend is not usable.) build 09-Jul-2018 11:59:44 debconf: falling back to frontend: Readline build 09-Jul-2018 11:59:44 debconf: unable to initialize frontend: Readline build 09-Jul-2018 11:59:44 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) build 09-Jul-2018 11:59:44 debconf: falling back to frontend: Teletype build 09-Jul-2018 11:59:44 Setting up krb5-locales (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 11:59:44 Setting up libroken18-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:59:45 Setting up libasn1-8-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:59:45 Setting up libkrb5support0:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 11:59:45 Setting up libk5crypto3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 11:59:45 Setting up libkeyutils1:amd64 (1.5.9-8ubuntu1) ... build 09-Jul-2018 11:59:45 Setting up libkrb5-3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 11:59:46 Setting up libgssapi-krb5-2:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 11:59:46 Setting up libhcrypto4-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:59:46 Setting up libheimbase1-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:59:46 Setting up libwind0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:59:46 Setting up libhx509-5-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:59:46 Setting up libkrb5-26-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:59:47 Setting up libheimntlm0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:59:47 Setting up libgssapi3-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 11:59:47 Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 11:59:47 Setting up libsasl2-2:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 11:59:47 Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu3.3) ... build 09-Jul-2018 11:59:47 Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d-1ubuntu0.1) ... build 09-Jul-2018 11:59:47 Setting up libcurl3-gnutls:amd64 (7.47.0-1ubuntu2.8) ... build 09-Jul-2018 11:59:48 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 09-Jul-2018 11:59:48 Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 11:59:48 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.5) ... build 09-Jul-2018 11:59:48 Setting up xml-core (0.13+nmu2) ... build 09-Jul-2018 11:59:49 Setting up fonts-dejavu-core (2.35-1) ... build 09-Jul-2018 11:59:50 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 09-Jul-2018 11:59:52 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:59:52 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 09-Jul-2018 11:59:52 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 09-Jul-2018 11:59:52 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 09-Jul-2018 11:59:52 Setting up libarpack2 (3.3.0-1build2) ... build 09-Jul-2018 11:59:52 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 09-Jul-2018 11:59:52 Setting up libdap17v5:amd64 (3.15.1-7) ... build 09-Jul-2018 11:59:52 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 09-Jul-2018 11:59:53 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 09-Jul-2018 11:59:53 Setting up libfreexl1:amd64 (1.0.2-1) ... build 09-Jul-2018 11:59:53 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 09-Jul-2018 11:59:53 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 09-Jul-2018 11:59:53 Setting up libgif7:amd64 (5.1.4-0.3~16.04) ... build 09-Jul-2018 11:59:53 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 09-Jul-2018 11:59:53 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 09-Jul-2018 11:59:54 Setting up libaec0:amd64 (0.3.2-1) ... build 09-Jul-2018 11:59:54 Setting up libsz2:amd64 (0.3.2-1) ... build 09-Jul-2018 11:59:54 Setting up libhdf5-10:amd64 (1.8.16+docs-4ubuntu1) ... build 09-Jul-2018 11:59:54 Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.2) ... build 09-Jul-2018 11:59:54 Setting up libminizip1:amd64 (1.1-8) ... build 09-Jul-2018 11:59:54 Setting up liburiparser1:amd64 (0.8.4-1) ... build 09-Jul-2018 11:59:55 Setting up libkmlbase1:amd64 (1.3.0-1) ... build 09-Jul-2018 11:59:55 Setting up libkmldom1:amd64 (1.3.0-1) ... build 09-Jul-2018 11:59:55 Setting up libkmlengine1:amd64 (1.3.0-1) ... build 09-Jul-2018 11:59:55 Setting up mysql-common (5.7.22-0ubuntu0.16.04.1) ... build 09-Jul-2018 11:59:56 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 09-Jul-2018 11:59:56 Setting up libmysqlclient20:amd64 (5.7.22-0ubuntu0.16.04.1) ... build 09-Jul-2018 11:59:56 Setting up libnetcdf11 (1:4.4.0-2) ... build 09-Jul-2018 11:59:56 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 09-Jul-2018 11:59:56 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 09-Jul-2018 11:59:56 Setting up proj-data (4.9.2-2) ... build 09-Jul-2018 11:59:56 Setting up libproj9 (4.9.2-2) ... build 09-Jul-2018 11:59:56 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 09-Jul-2018 11:59:57 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 09-Jul-2018 11:59:57 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 09-Jul-2018 11:59:57 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 09-Jul-2018 11:59:57 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 09-Jul-2018 11:59:57 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 09-Jul-2018 11:59:57 Setting up libpq5:amd64 (9.5.13-0ubuntu0.16.04) ... build 09-Jul-2018 11:59:58 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 09-Jul-2018 11:59:58 Setting up libwebp5:amd64 (0.4.4-1) ... build 09-Jul-2018 11:59:58 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 09-Jul-2018 11:59:58 Setting up p7zip-full (9.20.1~dfsg.1-4.2) ... build 09-Jul-2018 11:59:58 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 09-Jul-2018 12:00:01 Setting up proj-bin (4.9.2-2) ... build 09-Jul-2018 12:00:02 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 09-Jul-2018 12:00:02 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 09-Jul-2018 12:00:02 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 09-Jul-2018 12:00:02 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 09-Jul-2018 12:00:04 Setting up odbcinst (2.3.1-4.1) ... build 09-Jul-2018 12:00:04 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 09-Jul-2018 12:00:04 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 09-Jul-2018 12:00:06 Collecting pip==9.0.3 build 09-Jul-2018 12:00:06 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 09-Jul-2018 12:00:07 Installing collected packages: pip build 09-Jul-2018 12:00:07 Found existing installation: pip 8.1.1 build 09-Jul-2018 12:00:07 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 09-Jul-2018 12:00:08 Successfully installed pip-9.0.3 build 09-Jul-2018 12:00:08 You are using pip version 9.0.3, however version 10.0.1 is available. build 09-Jul-2018 12:00:08 You should consider upgrading via the 'pip install --upgrade pip' command. build 09-Jul-2018 12:00:09 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 09-Jul-2018 12:00:09 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 09-Jul-2018 12:00:09 Collecting pika==0.10.0 (from -r /home/clowder/requirements.txt (line 2)) build 09-Jul-2018 12:00:09 Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB) build 09-Jul-2018 12:00:09 Collecting requests==2.10.0 (from -r /home/clowder/requirements.txt (line 3)) build 09-Jul-2018 12:00:10 Downloading https://files.pythonhosted.org/packages/99/b4/63d99ba8e189c47d906b43bae18af4396e336f2b1bfec86af31efe2d2cb8/requests-2.10.0-py2.py3-none-any.whl (506kB) build 09-Jul-2018 12:00:10 Collecting wheel==0.24.0 (from -r /home/clowder/requirements.txt (line 4)) build 09-Jul-2018 12:00:10 Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB) build 09-Jul-2018 12:00:10 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 09-Jul-2018 12:00:10 Downloading https://files.pythonhosted.org/packages/fd/ce/aa4a385e3e9fd351737fd2b07edaa56e7a730448465aceda6b35086a0d9b/httplib2-0.11.3.tar.gz (215kB) build 09-Jul-2018 12:00:11 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 09-Jul-2018 12:00:11 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 09-Jul-2018 12:00:12 Installing collected packages: httplib2, gisdata, gsconfig, pika, requests, wheel build 09-Jul-2018 12:00:12 Running setup.py install for httplib2: started build 09-Jul-2018 12:00:13 Running setup.py install for httplib2: finished with status 'done' build 09-Jul-2018 12:00:13 Running setup.py install for gisdata: started build 09-Jul-2018 12:00:13 Running setup.py install for gisdata: finished with status 'done' build 09-Jul-2018 12:00:13 Running setup.py install for gsconfig: started build 09-Jul-2018 12:00:14 Running setup.py install for gsconfig: finished with status 'done' build 09-Jul-2018 12:00:14 Found existing installation: pika 0.11.2 build 09-Jul-2018 12:00:14 Uninstalling pika-0.11.2: build 09-Jul-2018 12:00:15 Successfully uninstalled pika-0.11.2 build 09-Jul-2018 12:00:16 Found existing installation: requests 2.18.4 build 09-Jul-2018 12:00:16 Uninstalling requests-2.18.4: build 09-Jul-2018 12:00:17 Successfully uninstalled requests-2.18.4 build 09-Jul-2018 12:00:17 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.11.3 pika-0.10.0 requests-2.10.0 wheel-0.24.0 build 09-Jul-2018 12:00:17 You are using pip version 9.0.3, however version 10.0.1 is available. build 09-Jul-2018 12:00:17 You should consider upgrading via the 'pip install --upgrade pip' command. build 09-Jul-2018 12:00:23 Removing intermediate container a1280944ac2a build 09-Jul-2018 12:00:23 ---> 3f1584a8a290 build 09-Jul-2018 12:00:23 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 09-Jul-2018 12:00:23 ---> Running in 2e66503fb434 build 09-Jul-2018 12:00:24 Removing intermediate container 2e66503fb434 build 09-Jul-2018 12:00:24 ---> 4d3e1329ae39 build 09-Jul-2018 12:00:24 Step 6/8 : CMD ["extractor"] build 09-Jul-2018 12:00:24 ---> Running in f13b98468e12 build 09-Jul-2018 12:00:25 Removing intermediate container f13b98468e12 build 09-Jul-2018 12:00:25 ---> f907fa7a4514 build 09-Jul-2018 12:00:25 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geoshp.preview" MAIN_SCRIPT="ncsa.geo.shp.py" GEOSERVER_URL="" GEOSERVER_USERNAME="admin" GEOSERVER_PASSWORD="geoserver" GEOSERVER_WORKSPACE="clowder" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 09-Jul-2018 12:00:25 ---> Running in 0e72624cfecc build 09-Jul-2018 12:00:25 Removing intermediate container 0e72624cfecc build 09-Jul-2018 12:00:25 ---> 848369fdec4e build 09-Jul-2018 12:00:25 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json rasterTemplate.xml /home/clowder/ build 09-Jul-2018 12:00:26 ---> fa7b7ed75e1d build 09-Jul-2018 12:00:26 Successfully built fa7b7ed75e1d build 09-Jul-2018 12:00:26 Successfully tagged 32019:latest build 09-Jul-2018 12:00:27 Untagged: 32019:latest build 09-Jul-2018 12:00:27 Sending build context to Docker daemon 1.471MB build 09-Jul-2018 12:00:27 build 09-Jul-2018 12:00:27 Step 1/8 : FROM clowder/pyclowder:2 build 09-Jul-2018 12:00:27 ---> b93e3777165c build 09-Jul-2018 12:00:27 Step 2/8 : MAINTAINER Yong Wook Kim build 09-Jul-2018 12:00:27 ---> Using cache build 09-Jul-2018 12:00:27 ---> ace05c4ca0f2 build 09-Jul-2018 12:00:27 Step 3/8 : COPY requirements.txt /home/clowder/ build 09-Jul-2018 12:00:28 ---> 8093981d58c5 build 09-Jul-2018 12:00:28 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full python-pyproj git && pip install --upgrade pip==9.0.3 && pip install -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 09-Jul-2018 12:00:28 ---> Running in 6d10056c471a build 09-Jul-2018 12:00:29 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 09-Jul-2018 12:00:29 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 09-Jul-2018 12:00:29 Get:3 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [83.5 kB] build 09-Jul-2018 12:00:29 Get:4 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [660 kB] build 09-Jul-2018 12:00:29 Get:5 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 09-Jul-2018 12:00:29 Get:6 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [452 kB] build 09-Jul-2018 12:00:29 Get:7 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3735 B] build 09-Jul-2018 12:00:30 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 09-Jul-2018 12:00:30 Get:9 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 09-Jul-2018 12:00:30 Get:10 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 09-Jul-2018 12:00:30 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 09-Jul-2018 12:00:30 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 09-Jul-2018 12:00:30 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 09-Jul-2018 12:00:31 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 09-Jul-2018 12:00:31 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [260 kB] build 09-Jul-2018 12:00:31 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1038 kB] build 09-Jul-2018 12:00:31 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 09-Jul-2018 12:00:31 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [825 kB] build 09-Jul-2018 12:00:31 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 09-Jul-2018 12:00:31 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7321 B] build 09-Jul-2018 12:00:31 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8088 B] build 09-Jul-2018 12:00:33 Fetched 25.3 MB in 4s (6274 kB/s) build 09-Jul-2018 12:00:34 Reading package lists... build 09-Jul-2018 12:00:35 Reading package lists... build 09-Jul-2018 12:00:36 Building dependency tree... build 09-Jul-2018 12:00:36 Reading state information... build 09-Jul-2018 12:00:36 The following additional packages will be installed: build 09-Jul-2018 12:00:36 fontconfig-config fonts-dejavu-core gcc-5-base git-man ifupdown iproute2 build 09-Jul-2018 12:00:36 isc-dhcp-client isc-dhcp-common krb5-locales less libaec0 libarmadillo6 build 09-Jul-2018 12:00:36 libarpack2 libasn1-8-heimdal libatm1 libblas-common libblas3 libbsd0 build 09-Jul-2018 12:00:36 libcurl3-gnutls libdap17v5 libdapclient6v5 libdns-export162 libedit2 build 09-Jul-2018 12:00:36 libepsilon1 liberror-perl libfontconfig1 libfreetype6 libfreexl1 libgdal1i build 09-Jul-2018 12:00:36 libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 libgif7 libgmp10 build 09-Jul-2018 12:00:36 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 09-Jul-2018 12:00:36 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 09-Jul-2018 12:00:36 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libjasper1 build 09-Jul-2018 12:00:36 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 libkmlbase1 build 09-Jul-2018 12:00:36 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 build 09-Jul-2018 12:00:36 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 libminizip1 libmnl0 build 09-Jul-2018 12:00:36 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 09-Jul-2018 12:00:36 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpopt0 libpq5 libproj9 build 09-Jul-2018 12:00:36 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 09-Jul-2018 12:00:36 libsasl2-modules-db libspatialite7 libstdc++6 libsuperlu4 libsz2 libtasn1-6 build 09-Jul-2018 12:00:36 libtiff5 liburiparser1 libwebp5 libwind0-heimdal libx11-6 libx11-data build 09-Jul-2018 12:00:36 libxau6 libxcb1 libxdmcp6 libxerces-c3.1 libxext6 libxml2 libxmuu1 build 09-Jul-2018 12:00:36 libxtables11 mysql-common netbase odbcinst odbcinst1debian2 openssh-client build 09-Jul-2018 12:00:36 patch perl perl-base perl-modules-5.22 proj-bin proj-data python-numpy build 09-Jul-2018 12:00:36 rename rsync sgml-base ucf xauth xml-core build 09-Jul-2018 12:00:36 Suggested packages: build 09-Jul-2018 12:00:36 gettext-base git-daemon-run | git-daemon-sysvinit git-doc git-el git-email build 09-Jul-2018 12:00:36 git-gui gitk gitweb git-arch git-cvs git-mediawiki git-svn ppp rdnssd build 09-Jul-2018 12:00:36 iproute2-doc resolvconf avahi-autoipd isc-dhcp-client-ddns apparmor build 09-Jul-2018 12:00:36 gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools build 09-Jul-2018 12:00:36 libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc odbc-postgresql build 09-Jul-2018 12:00:36 tdsodbc unixodbc-bin ogdi-bin poppler-data libsasl2-modules-otp build 09-Jul-2018 12:00:36 libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit build 09-Jul-2018 12:00:36 | libsasl2-modules-gssapi-heimdal ssh-askpass libpam-ssh keychain build 09-Jul-2018 12:00:36 monkeysphere p7zip-rar ed diffutils-doc perl-doc libterm-readline-gnu-perl build 09-Jul-2018 12:00:36 | libterm-readline-perl-perl make gcc gfortran python-dev python-nose build 09-Jul-2018 12:00:36 python-numpy-dbg python-numpy-doc openssh-server sgml-base-doc debhelper build 09-Jul-2018 12:00:36 The following NEW packages will be installed: build 09-Jul-2018 12:00:36 file fontconfig-config fonts-dejavu-core gdal-bin git git-man ifupdown build 09-Jul-2018 12:00:36 iproute2 isc-dhcp-client isc-dhcp-common krb5-locales less libaec0 build 09-Jul-2018 12:00:36 libarmadillo6 libarpack2 libasn1-8-heimdal libatm1 libblas-common libblas3 build 09-Jul-2018 12:00:36 libbsd0 libcurl3-gnutls libdap17v5 libdapclient6v5 libdns-export162 libedit2 build 09-Jul-2018 12:00:36 libepsilon1 liberror-perl libfontconfig1 libfreetype6 libfreexl1 libgdal1i build 09-Jul-2018 12:00:36 libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 libgif7 libgmp10 build 09-Jul-2018 12:00:36 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 09-Jul-2018 12:00:36 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 09-Jul-2018 12:00:36 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libjasper1 build 09-Jul-2018 12:00:36 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 libkmlbase1 build 09-Jul-2018 12:00:36 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 build 09-Jul-2018 12:00:36 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 libminizip1 libmnl0 build 09-Jul-2018 12:00:36 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 09-Jul-2018 12:00:36 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpopt0 libpq5 libproj9 build 09-Jul-2018 12:00:36 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 09-Jul-2018 12:00:36 libsasl2-modules-db libspatialite7 libsuperlu4 libsz2 libtasn1-6 libtiff5 build 09-Jul-2018 12:00:36 liburiparser1 libwebp5 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb1 build 09-Jul-2018 12:00:36 libxdmcp6 libxerces-c3.1 libxext6 libxml2 libxmuu1 libxtables11 mysql-common build 09-Jul-2018 12:00:36 netbase odbcinst odbcinst1debian2 openssh-client p7zip-full patch perl build 09-Jul-2018 12:00:36 perl-modules-5.22 proj-bin proj-data python-gdal python-numpy python-pyproj build 09-Jul-2018 12:00:36 rename rsync sgml-base ucf xauth xml-core build 09-Jul-2018 12:00:36 The following packages will be upgraded: build 09-Jul-2018 12:00:36 gcc-5-base libstdc++6 perl-base build 09-Jul-2018 12:00:36 3 upgraded, 126 newly installed, 0 to remove and 5 not upgraded. build 09-Jul-2018 12:00:36 Need to get 51.6 MB of archives. build 09-Jul-2018 12:00:36 After this operation, 225 MB of additional disk space will be used. build 09-Jul-2018 12:00:36 Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-base amd64 5.22.1-9ubuntu0.5 [1284 kB] build 09-Jul-2018 12:00:37 Get:2 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatm1 amd64 1:2.5.1-1.5 [24.2 kB] build 09-Jul-2018 12:00:37 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmnl0 amd64 1.0.3-5 [12.0 kB] build 09-Jul-2018 12:00:37 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpopt0 amd64 1.16-10 [26.0 kB] build 09-Jul-2018 12:00:37 Get:5 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgdbm3 amd64 1.8.3-13.1 [16.9 kB] build 09-Jul-2018 12:00:37 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxau6 amd64 1:1.0.8-1 [8376 B] build 09-Jul-2018 12:00:37 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxdmcp6 amd64 1:1.1.2-1.1 [11.0 kB] build 09-Jul-2018 12:00:37 Get:8 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb1 amd64 1.11.1-1ubuntu1 [40.0 kB] build 09-Jul-2018 12:00:37 Get:9 http://archive.ubuntu.com/ubuntu xenial/main amd64 libx11-data all 2:1.6.3-1ubuntu2 [113 kB] build 09-Jul-2018 12:00:37 Get:10 http://archive.ubuntu.com/ubuntu xenial/main amd64 libx11-6 amd64 2:1.6.3-1ubuntu2 [571 kB] build 09-Jul-2018 12:00:37 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxext6 amd64 2:1.3.3-1 [29.4 kB] build 09-Jul-2018 12:00:37 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 09-Jul-2018 12:00:37 Get:13 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3 [111 kB] build 09-Jul-2018 12:00:37 Get:14 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 09-Jul-2018 12:00:37 Get:15 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 09-Jul-2018 12:00:37 Get:16 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 09-Jul-2018 12:00:37 Get:17 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 09-Jul-2018 12:00:37 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-modules-5.22 all 5.22.1-9ubuntu0.5 [2645 kB] build 09-Jul-2018 12:00:37 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libperl5.22 amd64 5.22.1-9ubuntu0.5 [3396 kB] build 09-Jul-2018 12:00:37 Get:20 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl amd64 5.22.1-9ubuntu0.5 [238 kB] build 09-Jul-2018 12:00:37 Get:21 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 09-Jul-2018 12:00:37 Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 09-Jul-2018 12:00:37 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 09-Jul-2018 12:00:37 Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.1 [216 kB] build 09-Jul-2018 12:00:38 Get:25 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.1 [21.2 kB] build 09-Jul-2018 12:00:38 Get:26 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 iproute2 amd64 4.3.0-1ubuntu3.16.04.3 [522 kB] build 09-Jul-2018 12:00:38 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ifupdown amd64 0.8.10ubuntu1.4 [54.9 kB] build 09-Jul-2018 12:00:38 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libisc-export160 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [153 kB] build 09-Jul-2018 12:00:38 Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdns-export162 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [666 kB] build 09-Jul-2018 12:00:38 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-client amd64 4.3.3-5ubuntu12.10 [224 kB] build 09-Jul-2018 12:00:38 Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-common amd64 4.3.3-5ubuntu12.10 [105 kB] build 09-Jul-2018 12:00:38 Get:32 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 less amd64 481-2.1ubuntu0.2 [110 kB] build 09-Jul-2018 12:00:38 Get:33 http://archive.ubuntu.com/ubuntu xenial/main amd64 libbsd0 amd64 0.8.2-1 [41.7 kB] build 09-Jul-2018 12:00:38 Get:34 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 09-Jul-2018 12:00:38 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 09-Jul-2018 12:00:38 Get:36 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 09-Jul-2018 12:00:38 Get:37 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 09-Jul-2018 12:00:38 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 09-Jul-2018 12:00:38 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 09-Jul-2018 12:00:38 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 09-Jul-2018 12:00:38 Get:41 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1 [116 kB] build 09-Jul-2018 12:00:38 Get:42 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxtables11 amd64 1.6.0-2ubuntu3 [27.2 kB] build 09-Jul-2018 12:00:38 Get:43 http://archive.ubuntu.com/ubuntu xenial/main amd64 netbase all 5.3 [12.9 kB] build 09-Jul-2018 12:00:38 Get:44 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 09-Jul-2018 12:00:38 Get:45 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 09-Jul-2018 12:00:38 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 09-Jul-2018 12:00:38 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 09-Jul-2018 12:00:38 Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 09-Jul-2018 12:00:38 Get:49 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libk5crypto3 amd64 1.13.2+dfsg-5ubuntu2 [81.2 kB] build 09-Jul-2018 12:00:38 Get:50 http://archive.ubuntu.com/ubuntu xenial/main amd64 libkeyutils1 amd64 1.5.9-8ubuntu1 [9904 B] build 09-Jul-2018 12:00:38 Get:51 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-3 amd64 1.13.2+dfsg-5ubuntu2 [273 kB] build 09-Jul-2018 12:00:38 Get:52 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi-krb5-2 amd64 1.13.2+dfsg-5ubuntu2 [120 kB] build 09-Jul-2018 12:00:38 Get:53 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhcrypto4-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [85.0 kB] build 09-Jul-2018 12:00:38 Get:54 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimbase1-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [29.3 kB] build 09-Jul-2018 12:00:38 Get:55 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwind0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [47.8 kB] build 09-Jul-2018 12:00:38 Get:56 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhx509-5-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [107 kB] build 09-Jul-2018 12:00:38 Get:57 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 09-Jul-2018 12:00:38 Get:58 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 09-Jul-2018 12:00:38 Get:59 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 09-Jul-2018 12:00:38 Get:60 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 09-Jul-2018 12:00:38 Get:61 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 09-Jul-2018 12:00:38 Get:62 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu3.3 [161 kB] build 09-Jul-2018 12:00:38 Get:63 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d-1ubuntu0.1 [54.4 kB] build 09-Jul-2018 12:00:38 Get:64 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcurl3-gnutls amd64 7.47.0-1ubuntu2.8 [185 kB] build 09-Jul-2018 12:00:38 Get:65 http://archive.ubuntu.com/ubuntu xenial/main amd64 libedit2 amd64 3.1-20150325-1ubuntu2 [76.5 kB] build 09-Jul-2018 12:00:38 Get:66 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 09-Jul-2018 12:00:39 Get:67 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules amd64 2.1.26.dfsg1-14build1 [47.5 kB] build 09-Jul-2018 12:00:39 Get:68 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.5 [697 kB] build 09-Jul-2018 12:00:39 Get:69 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxmuu1 amd64 2:1.1.2-2 [9674 B] build 09-Jul-2018 12:00:39 Get:70 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 openssh-client amd64 1:7.2p2-4ubuntu2.4 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build 09-Jul-2018 12:02:16 Setting up libx11-data (2:1.6.3-1ubuntu2) ... build 09-Jul-2018 12:02:16 Setting up libx11-6:amd64 (2:1.6.3-1ubuntu2) ... build 09-Jul-2018 12:02:17 Setting up libxext6:amd64 (2:1.3.3-1) ... build 09-Jul-2018 12:02:17 Setting up sgml-base (1.26+nmu4ubuntu1) ... build 09-Jul-2018 12:02:17 Setting up libjpeg-turbo8:amd64 (1.4.2-0ubuntu3) ... build 09-Jul-2018 12:02:17 Setting up liblcms2-2:amd64 (2.6-3ubuntu2) ... build 09-Jul-2018 12:02:17 Setting up libblas-common (3.6.0-2ubuntu2) ... build 09-Jul-2018 12:02:17 Setting up libblas3 (3.6.0-2ubuntu2) ... build 09-Jul-2018 12:02:18 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 09-Jul-2018 12:02:18 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 09-Jul-2018 12:02:18 Setting up perl-modules-5.22 (5.22.1-9ubuntu0.5) ... build 09-Jul-2018 12:02:18 Setting up libperl5.22:amd64 (5.22.1-9ubuntu0.5) ... build 09-Jul-2018 12:02:19 Setting up perl (5.22.1-9ubuntu0.5) ... build 09-Jul-2018 12:02:19 update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode build 09-Jul-2018 12:02:19 Setting up libjbig0:amd64 (2.1-3.1) ... build 09-Jul-2018 12:02:19 Setting up libmagic1:amd64 (1:5.25-2ubuntu1.1) ... build 09-Jul-2018 12:02:19 Setting up file (1:5.25-2ubuntu1.1) ... build 09-Jul-2018 12:02:20 Setting up iproute2 (4.3.0-1ubuntu3.16.04.3) ... build 09-Jul-2018 12:02:20 Setting up ifupdown (0.8.10ubuntu1.4) ... build 09-Jul-2018 12:02:21 Creating /etc/network/interfaces. build 09-Jul-2018 12:02:21 Setting up libisc-export160 (1:9.10.3.dfsg.P4-8ubuntu1.10) ... build 09-Jul-2018 12:02:21 Setting up libdns-export162 (1:9.10.3.dfsg.P4-8ubuntu1.10) ... build 09-Jul-2018 12:02:21 Setting up isc-dhcp-client (4.3.3-5ubuntu12.10) ... build 09-Jul-2018 12:02:22 Setting up isc-dhcp-common (4.3.3-5ubuntu12.10) ... build 09-Jul-2018 12:02:22 Setting up less (481-2.1ubuntu0.2) ... build 09-Jul-2018 12:02:22 debconf: unable to initialize frontend: Dialog build 09-Jul-2018 12:02:22 debconf: (TERM is not set, so the dialog frontend is not usable.) build 09-Jul-2018 12:02:22 debconf: falling back to frontend: Readline build 09-Jul-2018 12:02:23 Setting up libbsd0:amd64 (0.8.2-1) ... build 09-Jul-2018 12:02:23 Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ... build 09-Jul-2018 12:02:23 Setting up libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ... build 09-Jul-2018 12:02:23 Setting up libhogweed4:amd64 (3.2-1ubuntu0.16.04.1) ... build 09-Jul-2018 12:02:24 Setting up libidn11:amd64 (1.32-3ubuntu1.2) ... build 09-Jul-2018 12:02:24 Setting up libp11-kit0:amd64 (0.23.2-5~ubuntu16.04.1) ... build 09-Jul-2018 12:02:24 Setting up libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 09-Jul-2018 12:02:24 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 09-Jul-2018 12:02:24 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1) ... build 09-Jul-2018 12:02:24 Setting up libxtables11:amd64 (1.6.0-2ubuntu3) ... build 09-Jul-2018 12:02:24 Setting up netbase (5.3) ... build 09-Jul-2018 12:02:25 Setting up ucf (3.0036) ... build 09-Jul-2018 12:02:25 debconf: unable to initialize frontend: Dialog build 09-Jul-2018 12:02:25 debconf: (TERM is not set, so the dialog frontend is not usable.) build 09-Jul-2018 12:02:25 debconf: falling back to frontend: Readline build 09-Jul-2018 12:02:25 Setting up krb5-locales (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 12:02:25 Setting up libroken18-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 12:02:25 Setting up libasn1-8-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 12:02:26 Setting up libkrb5support0:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 12:02:26 Setting up libk5crypto3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 12:02:26 Setting up libkeyutils1:amd64 (1.5.9-8ubuntu1) ... build 09-Jul-2018 12:02:26 Setting up libkrb5-3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 12:02:26 Setting up libgssapi-krb5-2:amd64 (1.13.2+dfsg-5ubuntu2) ... build 09-Jul-2018 12:02:26 Setting up libhcrypto4-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 12:02:27 Setting up libheimbase1-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 12:02:27 Setting up libwind0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 12:02:27 Setting up libhx509-5-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 12:02:27 Setting up libkrb5-26-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 12:02:28 Setting up libheimntlm0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 12:02:28 Setting up libgssapi3-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 09-Jul-2018 12:02:28 Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 12:02:28 Setting up libsasl2-2:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 12:02:28 Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu3.3) ... build 09-Jul-2018 12:02:29 Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d-1ubuntu0.1) ... build 09-Jul-2018 12:02:29 Setting up libcurl3-gnutls:amd64 (7.47.0-1ubuntu2.8) ... build 09-Jul-2018 12:02:29 Setting up libedit2:amd64 (3.1-20150325-1ubuntu2) ... build 09-Jul-2018 12:02:29 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 09-Jul-2018 12:02:29 Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-14build1) ... build 09-Jul-2018 12:02:29 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.5) ... build 09-Jul-2018 12:02:30 Setting up libxmuu1:amd64 (2:1.1.2-2) ... build 09-Jul-2018 12:02:30 Setting up openssh-client (1:7.2p2-4ubuntu2.4) ... build 09-Jul-2018 12:02:30 Setting up rsync (3.1.1-3ubuntu1.2) ... build 09-Jul-2018 12:02:30 invoke-rc.d: could not determine current runlevel build 09-Jul-2018 12:02:31 invoke-rc.d: policy-rc.d denied execution of restart. build 09-Jul-2018 12:02:31 Setting up xauth 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build 09-Jul-2018 12:02:36 Setting up libfreexl1:amd64 (1.0.2-1) ... build 09-Jul-2018 12:02:36 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 09-Jul-2018 12:02:36 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 09-Jul-2018 12:02:36 Setting up libgif7:amd64 (5.1.4-0.3~16.04) ... build 09-Jul-2018 12:02:36 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 09-Jul-2018 12:02:36 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 09-Jul-2018 12:02:37 Setting up libaec0:amd64 (0.3.2-1) ... build 09-Jul-2018 12:02:37 Setting up libsz2:amd64 (0.3.2-1) ... build 09-Jul-2018 12:02:37 Setting up libhdf5-10:amd64 (1.8.16+docs-4ubuntu1) ... build 09-Jul-2018 12:02:37 Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.2) ... build 09-Jul-2018 12:02:37 Setting up libminizip1:amd64 (1.1-8) ... build 09-Jul-2018 12:02:37 Setting up liburiparser1:amd64 (0.8.4-1) ... build 09-Jul-2018 12:02:37 Setting up libkmlbase1:amd64 (1.3.0-1) ... build 09-Jul-2018 12:02:38 Setting up libkmldom1:amd64 (1.3.0-1) ... build 09-Jul-2018 12:02:38 Setting up libkmlengine1:amd64 (1.3.0-1) ... build 09-Jul-2018 12:02:38 Setting up mysql-common (5.7.22-0ubuntu0.16.04.1) ... build 09-Jul-2018 12:02:38 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 09-Jul-2018 12:02:38 Setting up libmysqlclient20:amd64 (5.7.22-0ubuntu0.16.04.1) ... build 09-Jul-2018 12:02:39 Setting up libnetcdf11 (1:4.4.0-2) ... build 09-Jul-2018 12:02:39 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 09-Jul-2018 12:02:39 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 09-Jul-2018 12:02:39 Setting up proj-data (4.9.2-2) ... build 09-Jul-2018 12:02:39 Setting up libproj9 (4.9.2-2) ... build 09-Jul-2018 12:02:39 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 09-Jul-2018 12:02:39 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 09-Jul-2018 12:02:39 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 09-Jul-2018 12:02:40 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 09-Jul-2018 12:02:40 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 09-Jul-2018 12:02:40 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 09-Jul-2018 12:02:40 Setting up libpq5:amd64 (9.5.13-0ubuntu0.16.04) ... build 09-Jul-2018 12:02:40 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 09-Jul-2018 12:02:40 Setting up libwebp5:amd64 (0.4.4-1) ... build 09-Jul-2018 12:02:40 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 09-Jul-2018 12:02:40 Setting up liberror-perl (0.17-1.2) ... build 09-Jul-2018 12:02:41 Setting up git-man (1:2.7.4-0ubuntu1.4) ... build 09-Jul-2018 12:02:41 Setting up git (1:2.7.4-0ubuntu1.4) ... build 09-Jul-2018 12:02:41 Setting up p7zip-full (9.20.1~dfsg.1-4.2) ... build 09-Jul-2018 12:02:41 Setting up patch (2.7.5-1ubuntu0.16.04.1) ... build 09-Jul-2018 12:02:41 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 09-Jul-2018 12:02:44 Setting up python-pyproj (1.9.5.1-1build1) ... build 09-Jul-2018 12:02:46 Setting up rename (0.20-4) ... build 09-Jul-2018 12:02:46 update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode build 09-Jul-2018 12:02:46 Setting up proj-bin (4.9.2-2) ... build 09-Jul-2018 12:02:46 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 09-Jul-2018 12:02:47 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 09-Jul-2018 12:02:47 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 09-Jul-2018 12:02:47 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 09-Jul-2018 12:02:49 Setting up odbcinst (2.3.1-4.1) ... build 09-Jul-2018 12:02:49 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 09-Jul-2018 12:02:49 Processing triggers for systemd (229-4ubuntu21.2) ... build 09-Jul-2018 12:02:49 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 09-Jul-2018 12:02:51 Collecting pip==9.0.3 build 09-Jul-2018 12:02:51 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 09-Jul-2018 12:02:51 Installing collected packages: pip build 09-Jul-2018 12:02:51 Found existing installation: pip 8.1.1 build 09-Jul-2018 12:02:51 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 09-Jul-2018 12:02:52 Successfully installed pip-9.0.3 build 09-Jul-2018 12:02:52 You are using pip version 9.0.3, however version 10.0.1 is available. build 09-Jul-2018 12:02:52 You should consider upgrading via the 'pip install --upgrade pip' command. build 09-Jul-2018 12:02:53 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 09-Jul-2018 12:02:53 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 09-Jul-2018 12:02:54 Collecting pika==0.10.0 (from -r /home/clowder/requirements.txt (line 2)) build 09-Jul-2018 12:02:54 Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB) build 09-Jul-2018 12:02:54 Collecting requests==2.10.0 (from -r /home/clowder/requirements.txt (line 3)) build 09-Jul-2018 12:02:54 Downloading https://files.pythonhosted.org/packages/99/b4/63d99ba8e189c47d906b43bae18af4396e336f2b1bfec86af31efe2d2cb8/requests-2.10.0-py2.py3-none-any.whl (506kB) build 09-Jul-2018 12:02:54 Collecting wheel==0.24.0 (from -r /home/clowder/requirements.txt (line 4)) build 09-Jul-2018 12:02:54 Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB) build 09-Jul-2018 12:02:55 Collecting xmltodict==0.11.0 (from -r /home/clowder/requirements.txt (line 6)) build 09-Jul-2018 12:02:55 Downloading https://files.pythonhosted.org/packages/42/a9/7e99652c6bc619d19d58cdd8c47560730eb5825d43a7e25db2e1d776ceb7/xmltodict-0.11.0-py2.py3-none-any.whl build 09-Jul-2018 12:02:55 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 09-Jul-2018 12:02:55 Downloading https://files.pythonhosted.org/packages/fd/ce/aa4a385e3e9fd351737fd2b07edaa56e7a730448465aceda6b35086a0d9b/httplib2-0.11.3.tar.gz (215kB) build 09-Jul-2018 12:02:55 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 09-Jul-2018 12:02:55 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 09-Jul-2018 12:02:56 Installing collected packages: httplib2, gisdata, gsconfig, pika, requests, wheel, xmltodict build 09-Jul-2018 12:02:56 Running setup.py install for httplib2: started build 09-Jul-2018 12:02:57 Running setup.py install for httplib2: finished with status 'done' build 09-Jul-2018 12:02:57 Running setup.py install for gisdata: started build 09-Jul-2018 12:02:57 Running setup.py install for gisdata: finished with status 'done' build 09-Jul-2018 12:02:58 Running setup.py install for gsconfig: started build 09-Jul-2018 12:02:58 Running setup.py install for gsconfig: finished with status 'done' build 09-Jul-2018 12:02:58 Found existing installation: pika 0.11.2 build 09-Jul-2018 12:02:58 Uninstalling pika-0.11.2: build 09-Jul-2018 12:02:59 Successfully uninstalled pika-0.11.2 build 09-Jul-2018 12:02:59 Found existing installation: requests 2.18.4 build 09-Jul-2018 12:02:59 Uninstalling requests-2.18.4: build 09-Jul-2018 12:03:01 Successfully uninstalled requests-2.18.4 build 09-Jul-2018 12:03:01 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.11.3 pika-0.10.0 requests-2.10.0 wheel-0.24.0 xmltodict-0.11.0 build 09-Jul-2018 12:03:01 You are using pip version 9.0.3, however version 10.0.1 is available. build 09-Jul-2018 12:03:01 You should consider upgrading via the 'pip install --upgrade pip' command. build 09-Jul-2018 12:03:10 Removing intermediate container 6d10056c471a build 09-Jul-2018 12:03:10 ---> e2cdede08a2e build 09-Jul-2018 12:03:10 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 09-Jul-2018 12:03:11 ---> Running in 50d1defc8f76 build 09-Jul-2018 12:03:11 Removing intermediate container 50d1defc8f76 build 09-Jul-2018 12:03:11 ---> 506caf6b1034 build 09-Jul-2018 12:03:11 Step 6/8 : CMD ["extractor"] build 09-Jul-2018 12:03:11 ---> Running in 35e7df860d45 build 09-Jul-2018 12:03:12 Removing intermediate container 35e7df860d45 build 09-Jul-2018 12:03:12 ---> 091d37d4d5fe build 09-Jul-2018 12:03:12 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.pycsw.extractor" MAIN_SCRIPT="ncsa.geo.pycsw.py" GEOSERVER_URL="" GEOSERVER_WORKSPACE="clowder" PYCSW_URL="http://localhost:8000/pycsw" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 09-Jul-2018 12:03:12 ---> Running in db12cc797504 build 09-Jul-2018 12:03:12 Removing intermediate container db12cc797504 build 09-Jul-2018 12:03:12 ---> 192a0bd548c6 build 09-Jul-2018 12:03:12 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json pycsw_insert_template.xml /home/clowder/ build 09-Jul-2018 12:03:13 ---> 404474f41e11 build 09-Jul-2018 12:03:13 Successfully built 404474f41e11 build 09-Jul-2018 12:03:13 Successfully tagged 32019:latest build 09-Jul-2018 12:03:14 Untagged: 32019:latest build 09-Jul-2018 12:03:14 Untagged: clowder/extractors-geotiff-metadata:latest build 09-Jul-2018 12:03:14 Untagged: clowder/extractors-geotiff-preview:latest build 09-Jul-2018 12:03:14 Untagged: clowder/extractors-geoshp-preview:latest build 09-Jul-2018 12:03:15 Untagged: clowder/extractors-pycsw:latest simple 09-Jul-2018 12:03:15 Finished task 'docker build' with result: Success simple 09-Jul-2018 12:03:15 Running post build plugin 'Docker Container Cleanup' simple 09-Jul-2018 12:03:15 Running post build plugin 'NCover Results Collector' simple 09-Jul-2018 12:03:15 Running post build plugin 'Clover Results Collector' simple 09-Jul-2018 12:03:15 Running post build plugin 'npm Cache Cleanup' simple 09-Jul-2018 12:03:15 Running post build plugin 'Artifact Copier' simple 09-Jul-2018 12:03:15 Finalising the build... simple 09-Jul-2018 12:03:15 Stopping timer. simple 09-Jul-2018 12:03:15 Build CATS-EXGEO11-JOB1-2 completed. simple 09-Jul-2018 12:03:15 Running on server: post build plugin 'NCover Results Collector' simple 09-Jul-2018 12:03:15 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 09-Jul-2018 12:03:15 Running on server: post build plugin 'Clover Delta Calculator' simple 09-Jul-2018 12:03:15 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 09-Jul-2018 12:03:15 All post build plugins have finished simple 09-Jul-2018 12:03:15 Generating build results summary... simple 09-Jul-2018 12:03:15 Saving build results to disk... simple 09-Jul-2018 12:03:16 Logging substituted variables... simple 09-Jul-2018 12:03:16 Indexing build results... simple 09-Jul-2018 12:03:16 Finished building CATS-EXGEO11-JOB1-2.