simple 20-Aug-2018 16:13:18 Build Clowder - extractors-geo - SYN-172-Create-unique-workspace-name-in-the-geoserver - Default Job #4 (CATS-EXGEO13-JOB1-4) started building on agent buildserver-3.os.ncsa.edu simple 20-Aug-2018 16:13:18 Remote agent on host buildserver-3.os.ncsa.edu simple 20-Aug-2018 16:13:18 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1 simple 20-Aug-2018 16:13:18 Executing build Clowder - extractors-geo - SYN-172-Create-unique-workspace-name-in-the-geoserver - Default Job #4 (CATS-EXGEO13-JOB1-4) simple 20-Aug-2018 16:13:18 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 20-Aug-2018 16:13:18 Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1 simple 20-Aug-2018 16:13:18 Updating source code to revision: 6038e43c663e04f9a3bd2951a6f36e9a5ddb302b simple 20-Aug-2018 16:13:18 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1/.git'. simple 20-Aug-2018 16:13:18 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1/.git/ simple 20-Aug-2018 16:13:19 Fetching 'refs/heads/SYN-172-Create-unique-workspace-name-in-the-geoserver' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git'. Will try to do a shallow fetch. simple 20-Aug-2018 16:13:19 Warning: Permanently added '[127.0.0.1]:46463' (RSA) to the list of known hosts. simple 20-Aug-2018 16:13:19 From ssh://127.0.0.1:46463/cats/extractors-geo simple 20-Aug-2018 16:13:19 * [new branch] SYN-172-Create-unique-workspace-name-in-the-geoserver -> SYN-172-Create-unique-workspace-name-in-the-geoserver simple 20-Aug-2018 16:13:19 Checking out revision 6038e43c663e04f9a3bd2951a6f36e9a5ddb302b. simple 20-Aug-2018 16:13:19 Switched to branch 'SYN-172-Create-unique-workspace-name-in-the-geoserver' simple 20-Aug-2018 16:13:19 Updated source code to revision: 6038e43c663e04f9a3bd2951a6f36e9a5ddb302b simple 20-Aug-2018 16:13:19 Finished task 'Checkout Default Repository' with result: Success simple 20-Aug-2018 16:13:19 Running pre-build action: VCS Version Collector simple 20-Aug-2018 16:13:19 Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 20-Aug-2018 16:13:19 Beginning to execute external process for build 'Clowder - extractors-geo - SYN-172-Create-unique-workspace-name-in-the-geoserver - Default Job #4 (CATS-EXGEO13-JOB1-4)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1\n ... using extra environment variables: 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Job\nbamboo_planRepository_1_revision=6038e43c663e04f9a3bd2951a6f36e9a5ddb302b\nbamboo_capability_system_builder_command_python3=/usr/bin/python3\nbamboo_repository_name=extractors-geo\nbamboo_repository_163708934_branch_name=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_buildFailed=false\nbamboo_capability_system_docker_executable=/usr/bin/docker\nbamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt\nbamboo_planRepository_branch=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/usr/bin/git\nbamboo_repository_git_username=\nbamboo_planRepository_1_previousRevision=d39f3a424e6a3bf10df22ff1ecb5107603f7aaec\nbamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13\nbamboo_planRepository_branchDisplayName=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs\nbamboo_repository_163708934_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git\nbamboo_planRepository_1_type=bbserver\nbamboo_planRepository_branchName=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7\nbamboo_capability_system_hostname=buildserver-1\nbamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_software_mongo=/usr/bin/mongo\nbamboo_plan_storageTag=plan-163512331\nbamboo_repository_163708934_git_branch=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs\nbamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl\nbamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=bbserver\nbamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache\nbamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git\nbamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node\nbamboo_repository_163708934_name=extractors-geo\nbamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4\nbamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9\nbamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp\nbamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1\nbamboo_planKey=CATS-EXGEO13\nbamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git\nbamboo_planRepository_username=\nbamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41\nbamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh\nbamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60\nbamboo_planRepository_1_branchName=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_repository_163708934_revision_number=6038e43c663e04f9a3bd2951a6f36e9a5ddb302b\n build 20-Aug-2018 16:13:19 Sending build context to Docker daemon 1.324MB build 20-Aug-2018 16:13:19 build 20-Aug-2018 16:13:19 Step 1/8 : FROM clowder/pyclowder:2 build 20-Aug-2018 16:13:20 2: Pulling from clowder/pyclowder build 20-Aug-2018 16:13:20 b234f539f7a1: Pulling fs layer build 20-Aug-2018 16:13:20 55172d420b43: Pulling fs layer build 20-Aug-2018 16:13:20 5ba5bbeb6b91: Pulling fs layer build 20-Aug-2018 16:13:20 43ae2841ad7a: Pulling fs layer build 20-Aug-2018 16:13:20 f6c9c6de4190: Pulling fs layer build 20-Aug-2018 16:13:20 d09498741374: Pulling fs layer build 20-Aug-2018 16:13:20 00f9ba584920: Pulling fs layer build 20-Aug-2018 16:13:20 5693300db94c: Pulling fs layer build 20-Aug-2018 16:13:20 4af4b0c37187: Pulling fs layer build 20-Aug-2018 16:13:20 d3c9efd4d105: Pulling fs layer build 20-Aug-2018 16:13:20 d09498741374: Waiting build 20-Aug-2018 16:13:20 00f9ba584920: Waiting build 20-Aug-2018 16:13:20 f6c9c6de4190: Waiting build 20-Aug-2018 16:13:20 5693300db94c: Waiting build 20-Aug-2018 16:13:20 4af4b0c37187: Waiting build 20-Aug-2018 16:13:20 d3c9efd4d105: Waiting build 20-Aug-2018 16:13:20 5ba5bbeb6b91: Verifying Checksum build 20-Aug-2018 16:13:20 5ba5bbeb6b91: Download complete build 20-Aug-2018 16:13:20 55172d420b43: Download complete build 20-Aug-2018 16:13:20 43ae2841ad7a: Verifying Checksum build 20-Aug-2018 16:13:20 43ae2841ad7a: Download complete build 20-Aug-2018 16:13:20 f6c9c6de4190: Verifying Checksum build 20-Aug-2018 16:13:20 f6c9c6de4190: Download complete build 20-Aug-2018 16:13:20 00f9ba584920: Verifying Checksum build 20-Aug-2018 16:13:20 00f9ba584920: Download complete build 20-Aug-2018 16:13:21 5693300db94c: Verifying Checksum build 20-Aug-2018 16:13:21 5693300db94c: Download complete build 20-Aug-2018 16:13:21 d09498741374: Verifying Checksum build 20-Aug-2018 16:13:21 d09498741374: Download complete build 20-Aug-2018 16:13:21 4af4b0c37187: Verifying Checksum build 20-Aug-2018 16:13:21 4af4b0c37187: Download complete build 20-Aug-2018 16:13:21 d3c9efd4d105: Verifying Checksum build 20-Aug-2018 16:13:21 d3c9efd4d105: Download complete build 20-Aug-2018 16:13:21 b234f539f7a1: Verifying Checksum build 20-Aug-2018 16:13:21 b234f539f7a1: Download complete build 20-Aug-2018 16:13:23 b234f539f7a1: Pull complete build 20-Aug-2018 16:13:23 55172d420b43: Pull complete build 20-Aug-2018 16:13:24 5ba5bbeb6b91: Pull complete build 20-Aug-2018 16:13:24 43ae2841ad7a: Pull complete build 20-Aug-2018 16:13:25 f6c9c6de4190: Pull complete build 20-Aug-2018 16:13:26 d09498741374: Pull complete build 20-Aug-2018 16:13:26 00f9ba584920: Pull complete build 20-Aug-2018 16:13:27 5693300db94c: Pull complete build 20-Aug-2018 16:13:27 4af4b0c37187: Pull complete build 20-Aug-2018 16:13:27 d3c9efd4d105: Pull complete build 20-Aug-2018 16:13:27 Digest: sha256:c7db6d13f3f9a1aa9c624dc4782470a230d37d2cdee737d45d556f8e8d8948b3 build 20-Aug-2018 16:13:27 Status: Downloaded newer image for clowder/pyclowder:2 build 20-Aug-2018 16:13:27 ---> b27d04debca2 build 20-Aug-2018 16:13:27 Step 2/8 : MAINTAINER Yong Wook Kim build 20-Aug-2018 16:13:27 ---> Running in 59121234917a build 20-Aug-2018 16:13:28 Removing intermediate container 59121234917a build 20-Aug-2018 16:13:28 ---> ec56e813cd0a build 20-Aug-2018 16:13:28 Step 3/8 : COPY requirements.txt /home/clowder/ build 20-Aug-2018 16:13:28 ---> 9b7cfc3d0b3f build 20-Aug-2018 16:13:28 Step 4/8 : RUN apt-get update && apt-get -y install python-dev python-pip python-dev build-essential python-numpy gdal-bin python-gdal python-scipy software-properties-common && apt-add-repository ppa:ubuntugis/ppa && pip install --upgrade pip==9.0.3 && pip install -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 20-Aug-2018 16:13:28 ---> Running in b0375466dccc build 20-Aug-2018 16:13:29 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 20-Aug-2018 16:13:29 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 20-Aug-2018 16:13:29 Get:3 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [88.1 kB] build 20-Aug-2018 16:13:29 Get:4 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [688 kB] build 20-Aug-2018 16:13:29 Get:5 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 20-Aug-2018 16:13:29 Get:6 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [465 kB] build 20-Aug-2018 16:13:29 Get:7 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3748 B] build 20-Aug-2018 16:13:30 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 20-Aug-2018 16:13:30 Get:9 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 20-Aug-2018 16:13:30 Get:10 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 20-Aug-2018 16:13:30 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 20-Aug-2018 16:13:31 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 20-Aug-2018 16:13:31 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 20-Aug-2018 16:13:31 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 20-Aug-2018 16:13:31 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [275 kB] build 20-Aug-2018 16:13:31 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1073 kB] build 20-Aug-2018 16:13:31 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 20-Aug-2018 16:13:31 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [876 kB] build 20-Aug-2018 16:13:31 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 20-Aug-2018 16:13:31 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7343 B] build 20-Aug-2018 16:13:31 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8086 B] build 20-Aug-2018 16:13:32 Fetched 25.5 MB in 3s (7555 kB/s) build 20-Aug-2018 16:13:33 Reading package lists... build 20-Aug-2018 16:13:34 Reading package lists... build 20-Aug-2018 16:13:34 Building dependency tree... build 20-Aug-2018 16:13:34 Reading state information... build 20-Aug-2018 16:13:34 python-pip is already the newest version (8.1.1-2ubuntu0.4). build 20-Aug-2018 16:13:34 The following additional packages will be installed: build 20-Aug-2018 16:13:34 apt apt-utils binutils bzip2 cpp cpp-5 cron dbus dh-python distro-info-data build 20-Aug-2018 16:13:34 dpkg-dev fakeroot fontconfig-config fonts-dejavu-core g++ g++-5 gcc gcc-5 build 20-Aug-2018 16:13:34 gcc-5-base gir1.2-glib-2.0 ifupdown iproute2 isc-dhcp-client isc-dhcp-common build 20-Aug-2018 16:13:34 iso-codes krb5-locales libaec0 libalgorithm-diff-perl build 20-Aug-2018 16:13:34 libalgorithm-diff-xs-perl libalgorithm-merge-perl libapt-inst2.0 build 20-Aug-2018 16:13:34 libapt-pkg5.0 libarmadillo6 libarpack2 libasan2 libasn1-8-heimdal libatm1 build 20-Aug-2018 16:13:34 libatomic1 libblas-common libblas3 libc-dev-bin libc6-dev libcap-ng0 build 20-Aug-2018 16:13:34 libcc1-0 libcilkrts5 libcurl3-gnutls libdap17v5 libdapclient6v5 libdbus-1-3 build 20-Aug-2018 16:13:34 libdbus-glib-1-2 libdns-export162 libdpkg-perl libepsilon1 libexpat1-dev build 20-Aug-2018 16:13:34 libfakeroot libfile-fcntllock-perl libfontconfig1 libfreetype6 libfreexl1 build 20-Aug-2018 16:13:34 libgcc-5-dev libgdal1i libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 20-Aug-2018 16:13:34 libgif7 libgirepository-1.0-1 libglib2.0-0 libglib2.0-data libgmp10 build 20-Aug-2018 16:13:34 libgnutls30 libgomp1 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 20-Aug-2018 16:13:34 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 20-Aug-2018 16:13:34 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libisl15 build 20-Aug-2018 16:13:34 libitm1 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 build 20-Aug-2018 16:13:34 libkeyutils1 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal build 20-Aug-2018 16:13:34 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 liblsan0 build 20-Aug-2018 16:13:34 libltdl7 libminizip1 libmnl0 libmpc3 libmpdec2 libmpfr4 libmpx0 build 20-Aug-2018 16:13:34 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 20-Aug-2018 16:13:34 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpq5 libproj9 build 20-Aug-2018 16:13:34 libpython-dev libpython2.7 libpython2.7-dev libpython3-stdlib build 20-Aug-2018 16:13:34 libpython3.5-minimal libpython3.5-stdlib libquadmath0 libroken18-heimdal build 20-Aug-2018 16:13:34 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libspatialite7 build 20-Aug-2018 16:13:34 libstdc++-5-dev libstdc++6 libsuperlu4 libsz2 libtasn1-6 libtiff5 libtsan0 build 20-Aug-2018 16:13:34 libubsan0 liburiparser1 libwebp5 libwebpmux1 libwind0-heimdal libxerces-c3.1 build 20-Aug-2018 16:13:34 libxml2 libxtables11 linux-libc-dev lsb-release make manpages manpages-dev build 20-Aug-2018 16:13:34 mysql-common netbase odbcinst odbcinst1debian2 patch perl perl-base build 20-Aug-2018 16:13:34 perl-modules-5.22 proj-bin proj-data python-apt-common python-decorator build 20-Aug-2018 16:13:34 python-imaging python-pil python2.7-dev python3 python3-apt python3-dbus build 20-Aug-2018 16:13:34 python3-gi python3-minimal python3-pycurl python3-software-properties build 20-Aug-2018 16:13:34 python3.5 python3.5-minimal rename sgml-base shared-mime-info ucf build 20-Aug-2018 16:13:34 unattended-upgrades xdg-user-dirs xml-core xz-utils build 20-Aug-2018 16:13:34 Suggested packages: build 20-Aug-2018 16:13:34 aptitude | synaptic | wajig apt-doc python-apt binutils-doc bzip2-doc build 20-Aug-2018 16:13:34 cpp-doc gcc-5-locales anacron logrotate checksecurity exim4 | postfix build 20-Aug-2018 16:13:34 | mail-transport-agent dbus-user-session | dbus-x11 debian-keyring build 20-Aug-2018 16:13:34 g++-multilib g++-5-multilib gcc-5-doc libstdc++6-5-dbg gcc-multilib autoconf build 20-Aug-2018 16:13:34 automake libtool flex bison gdb gcc-doc gcc-5-multilib libgcc1-dbg build 20-Aug-2018 16:13:34 libgomp1-dbg libitm1-dbg libatomic1-dbg libasan2-dbg liblsan0-dbg build 20-Aug-2018 16:13:34 libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx0-dbg libquadmath0-dbg ppp build 20-Aug-2018 16:13:34 rdnssd iproute2-doc resolvconf avahi-autoipd isc-dhcp-client-ddns apparmor build 20-Aug-2018 16:13:34 isoquery glibc-doc gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev build 20-Aug-2018 16:13:34 hdf4-tools libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc build 20-Aug-2018 16:13:34 odbc-postgresql tdsodbc unixodbc-bin ogdi-bin poppler-data build 20-Aug-2018 16:13:34 libsasl2-modules-otp libsasl2-modules-ldap libsasl2-modules-sql build 20-Aug-2018 16:13:34 libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal build 20-Aug-2018 16:13:34 libstdc++-5-doc lsb make-doc man-browser ed diffutils-doc perl-doc build 20-Aug-2018 16:13:34 libterm-readline-gnu-perl | libterm-readline-perl-perl gfortran python-nose build 20-Aug-2018 16:13:34 python-numpy-dbg python-numpy-doc python-pil-doc python-pil-dbg build 20-Aug-2018 16:13:34 python-scipy-doc python3-doc python3-tk python3-venv python3-apt-dbg build 20-Aug-2018 16:13:34 python-apt-doc python-dbus-doc python3-dbus-dbg libcurl4-gnutls-dev build 20-Aug-2018 16:13:34 python-pycurl-doc python3-pycurl-dbg python3.5-venv python3.5-doc build 20-Aug-2018 16:13:34 binfmt-support sgml-base-doc bsd-mailx mail-transport-agent debhelper build 20-Aug-2018 16:13:34 The following NEW packages will be installed: build 20-Aug-2018 16:13:34 apt-utils binutils build-essential bzip2 cpp cpp-5 cron dbus dh-python build 20-Aug-2018 16:13:34 distro-info-data dpkg-dev fakeroot fontconfig-config fonts-dejavu-core g++ build 20-Aug-2018 16:13:34 g++-5 gcc gcc-5 gdal-bin gir1.2-glib-2.0 ifupdown iproute2 isc-dhcp-client build 20-Aug-2018 16:13:34 isc-dhcp-common iso-codes krb5-locales libaec0 libalgorithm-diff-perl build 20-Aug-2018 16:13:34 libalgorithm-diff-xs-perl libalgorithm-merge-perl libapt-inst2.0 build 20-Aug-2018 16:13:34 libarmadillo6 libarpack2 libasan2 libasn1-8-heimdal libatm1 libatomic1 build 20-Aug-2018 16:13:34 libblas-common libblas3 libc-dev-bin libc6-dev libcap-ng0 libcc1-0 build 20-Aug-2018 16:13:34 libcilkrts5 libcurl3-gnutls libdap17v5 libdapclient6v5 libdbus-1-3 build 20-Aug-2018 16:13:34 libdbus-glib-1-2 libdns-export162 libdpkg-perl libepsilon1 libexpat1-dev build 20-Aug-2018 16:13:34 libfakeroot libfile-fcntllock-perl libfontconfig1 libfreetype6 libfreexl1 build 20-Aug-2018 16:13:34 libgcc-5-dev libgdal1i libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 20-Aug-2018 16:13:34 libgif7 libgirepository-1.0-1 libglib2.0-0 libglib2.0-data libgmp10 build 20-Aug-2018 16:13:34 libgnutls30 libgomp1 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 20-Aug-2018 16:13:34 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 20-Aug-2018 16:13:34 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libisl15 build 20-Aug-2018 16:13:34 libitm1 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 build 20-Aug-2018 16:13:34 libkeyutils1 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal build 20-Aug-2018 16:13:34 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 liblsan0 build 20-Aug-2018 16:13:34 libltdl7 libminizip1 libmnl0 libmpc3 libmpdec2 libmpfr4 libmpx0 build 20-Aug-2018 16:13:34 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 20-Aug-2018 16:13:34 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpq5 libproj9 build 20-Aug-2018 16:13:34 libpython-dev libpython2.7 libpython2.7-dev libpython3-stdlib build 20-Aug-2018 16:13:34 libpython3.5-minimal libpython3.5-stdlib libquadmath0 libroken18-heimdal build 20-Aug-2018 16:13:34 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libspatialite7 build 20-Aug-2018 16:13:34 libstdc++-5-dev libsuperlu4 libsz2 libtasn1-6 libtiff5 libtsan0 libubsan0 build 20-Aug-2018 16:13:34 liburiparser1 libwebp5 libwebpmux1 libwind0-heimdal libxerces-c3.1 libxml2 build 20-Aug-2018 16:13:34 libxtables11 linux-libc-dev lsb-release make manpages manpages-dev build 20-Aug-2018 16:13:34 mysql-common netbase odbcinst odbcinst1debian2 patch perl perl-modules-5.22 build 20-Aug-2018 16:13:34 proj-bin proj-data python-apt-common python-decorator python-dev python-gdal build 20-Aug-2018 16:13:34 python-imaging python-numpy python-pil python-scipy python2.7-dev python3 build 20-Aug-2018 16:13:34 python3-apt python3-dbus python3-gi python3-minimal python3-pycurl build 20-Aug-2018 16:13:34 python3-software-properties python3.5 python3.5-minimal rename sgml-base build 20-Aug-2018 16:13:34 shared-mime-info software-properties-common ucf unattended-upgrades build 20-Aug-2018 16:13:34 xdg-user-dirs xml-core xz-utils build 20-Aug-2018 16:13:34 The following packages will be upgraded: build 20-Aug-2018 16:13:34 apt gcc-5-base libapt-pkg5.0 libstdc++6 perl-base build 20-Aug-2018 16:13:35 5 upgraded, 188 newly installed, 0 to remove and 16 not upgraded. build 20-Aug-2018 16:13:35 Need to get 134 MB of archives. build 20-Aug-2018 16:13:35 After this operation, 468 MB of additional disk space will be used. build 20-Aug-2018 16:13:35 Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-base amd64 5.22.1-9ubuntu0.5 [1284 kB] build 20-Aug-2018 16:13:36 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 20-Aug-2018 16:13:36 Get:3 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 20-Aug-2018 16:13:36 Get:4 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libapt-pkg5.0 amd64 1.2.27 [706 kB] build 20-Aug-2018 16:13:36 Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 apt amd64 1.2.27 [1042 kB] build 20-Aug-2018 16:13:36 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 cron amd64 3.0pl1-128ubuntu2 [68.4 kB] build 20-Aug-2018 16:13:36 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatm1 amd64 1:2.5.1-1.5 [24.2 kB] build 20-Aug-2018 16:13:36 Get:8 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmnl0 amd64 1.0.3-5 [12.0 kB] build 20-Aug-2018 16:13:36 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython3.5-minimal amd64 3.5.2-2ubuntu0~16.04.4 [523 kB] build 20-Aug-2018 16:13:36 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3.5-minimal amd64 3.5.2-2ubuntu0~16.04.4 [1597 kB] build 20-Aug-2018 16:13:36 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-minimal amd64 3.5.1-3 [23.3 kB] build 20-Aug-2018 16:13:36 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpdec2 amd64 2.4.2-1 [82.6 kB] build 20-Aug-2018 16:13:36 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython3.5-stdlib amd64 3.5.2-2ubuntu0~16.04.4 [2132 kB] build 20-Aug-2018 16:13:36 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3.5 amd64 3.5.2-2ubuntu0~16.04.4 [165 kB] build 20-Aug-2018 16:13:36 Get:15 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpython3-stdlib amd64 3.5.1-3 [6818 B] build 20-Aug-2018 16:13:36 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dh-python all 2.20151103ubuntu1.1 [74.1 kB] build 20-Aug-2018 16:13:36 Get:17 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3 amd64 3.5.1-3 [8710 B] build 20-Aug-2018 16:13:36 Get:18 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgdbm3 amd64 1.8.3-13.1 [16.9 kB] build 20-Aug-2018 16:13:36 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libglib2.0-0 amd64 2.48.2-0ubuntu4 [1119 kB] build 20-Aug-2018 16:13:36 Get:20 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 20-Aug-2018 16:13:36 Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 20-Aug-2018 16:13:36 Get:22 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 20-Aug-2018 16:13:36 Get:23 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 20-Aug-2018 16:13:36 Get:24 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 20-Aug-2018 16:13:36 Get:25 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 20-Aug-2018 16:13:36 Get:26 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-modules-5.22 all 5.22.1-9ubuntu0.5 [2645 kB] build 20-Aug-2018 16:13:36 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libperl5.22 amd64 5.22.1-9ubuntu0.5 [3396 kB] build 20-Aug-2018 16:13:36 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl amd64 5.22.1-9ubuntu0.5 [238 kB] build 20-Aug-2018 16:13:36 Get:29 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 20-Aug-2018 16:13:36 Get:30 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 20-Aug-2018 16:13:36 Get:31 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpfr4 amd64 3.1.4-1 [191 kB] build 20-Aug-2018 16:13:36 Get:32 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpc3 amd64 1.0.3-1 [39.7 kB] build 20-Aug-2018 16:13:36 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libapt-inst2.0 amd64 1.2.27 [55.4 kB] build 20-Aug-2018 16:13:36 Get:34 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 apt-utils amd64 1.2.27 [196 kB] build 20-Aug-2018 16:13:36 Get:35 http://archive.ubuntu.com/ubuntu xenial/main amd64 bzip2 amd64 1.0.6-8 [32.7 kB] build 20-Aug-2018 16:13:36 Get:36 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 distro-info-data all 0.28ubuntu0.8 [4502 B] build 20-Aug-2018 16:13:36 Get:37 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 iproute2 amd64 4.3.0-1ubuntu3.16.04.3 [522 kB] build 20-Aug-2018 16:13:37 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ifupdown amd64 0.8.10ubuntu1.4 [54.9 kB] build 20-Aug-2018 16:13:37 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libisc-export160 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [153 kB] build 20-Aug-2018 16:13:37 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdns-export162 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [666 kB] build 20-Aug-2018 16:13:37 Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-client amd64 4.3.3-5ubuntu12.10 [224 kB] build 20-Aug-2018 16:13:37 Get:42 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-common amd64 4.3.3-5ubuntu12.10 [105 kB] build 20-Aug-2018 16:13:37 Get:43 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 20-Aug-2018 16:13:37 Get:44 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 20-Aug-2018 16:13:37 Get:45 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 20-Aug-2018 16:13:37 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 20-Aug-2018 16:13:37 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 20-Aug-2018 16:13:37 Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 20-Aug-2018 16:13:37 Get:49 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 20-Aug-2018 16:13:37 Get:50 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxtables11 amd64 1.6.0-2ubuntu3 [27.2 kB] build 20-Aug-2018 16:13:37 Get:51 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 lsb-release all 9.20160110ubuntu0.2 [11.8 kB] build 20-Aug-2018 16:13:37 Get:52 http://archive.ubuntu.com/ubuntu xenial/main amd64 netbase all 5.3 [12.9 kB] build 20-Aug-2018 16:13:37 Get:53 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 20-Aug-2018 16:13:37 Get:54 http://archive.ubuntu.com/ubuntu xenial/main amd64 libcap-ng0 amd64 0.7.7-1 [10.9 kB] build 20-Aug-2018 16:13:37 Get:55 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdbus-1-3 amd64 1.10.6-1ubuntu3.3 [161 kB] build 20-Aug-2018 16:13:37 Get:56 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dbus amd64 1.10.6-1ubuntu3.3 [142 kB] build 20-Aug-2018 16:13:37 Get:57 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgirepository-1.0-1 amd64 1.46.0-3ubuntu1 [88.3 kB] build 20-Aug-2018 16:13:37 Get:58 http://archive.ubuntu.com/ubuntu xenial/main amd64 gir1.2-glib-2.0 amd64 1.46.0-3ubuntu1 [127 kB] build 20-Aug-2018 16:13:37 Get:59 http://archive.ubuntu.com/ubuntu xenial/main amd64 iso-codes all 3.65-1 [2268 kB] build 20-Aug-2018 16:13:37 Get:60 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 20-Aug-2018 16:13:37 Get:61 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 20-Aug-2018 16:13:37 Get:62 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 20-Aug-2018 16:13:37 Get:63 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 20-Aug-2018 16:13:37 Get:64 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libk5crypto3 amd64 1.13.2+dfsg-5ubuntu2 [81.2 kB] build 20-Aug-2018 16:13:37 Get:65 http://archive.ubuntu.com/ubuntu xenial/main amd64 libkeyutils1 amd64 1.5.9-8ubuntu1 [9904 B] build 20-Aug-2018 16:13:37 Get:66 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-3 amd64 1.13.2+dfsg-5ubuntu2 [273 kB] build 20-Aug-2018 16:13:37 Get:67 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi-krb5-2 amd64 1.13.2+dfsg-5ubuntu2 [120 kB] build 20-Aug-2018 16:13:37 Get:68 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhcrypto4-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [85.0 kB] build 20-Aug-2018 16:13:37 Get:69 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimbase1-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [29.3 kB] build 20-Aug-2018 16:13:37 Get:70 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwind0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [47.8 kB] build 20-Aug-2018 16:13:37 Get:71 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhx509-5-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [107 kB] build 20-Aug-2018 16:13:37 Get:72 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 20-Aug-2018 16:13:37 Get:73 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 20-Aug-2018 16:13:37 Get:74 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 20-Aug-2018 16:13:37 Get:75 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 20-Aug-2018 16:13:37 Get:76 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 20-Aug-2018 16:13:37 Get:77 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu3.3 [161 kB] build 20-Aug-2018 16:13:37 Get:78 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d-1ubuntu0.1 [54.4 kB] build 20-Aug-2018 16:13:37 Get:79 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcurl3-gnutls amd64 7.47.0-1ubuntu2.8 [185 kB] build 20-Aug-2018 16:13:37 Get:80 http://archive.ubuntu.com/ubuntu xenial/main amd64 libdbus-glib-1-2 amd64 0.106-1 [67.1 kB] build 20-Aug-2018 16:13:37 Get:81 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libglib2.0-data all 2.48.2-0ubuntu4 [132 kB] build 20-Aug-2018 16:13:37 Get:82 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 20-Aug-2018 16:13:37 Get:83 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules amd64 2.1.26.dfsg1-14build1 [47.5 kB] build 20-Aug-2018 16:13:37 Get:84 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 20-Aug-2018 16:13:37 Get:85 http://archive.ubuntu.com/ubuntu xenial/main amd64 manpages all 4.04-2 [1087 kB] build 20-Aug-2018 16:13:37 Get:86 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-apt-common all 1.1.0~beta1ubuntu0.16.04.2 [16.0 kB] build 20-Aug-2018 16:13:37 Get:87 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3-apt amd64 1.1.0~beta1ubuntu0.16.04.2 [137 kB] build 20-Aug-2018 16:13:37 Get:88 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-dbus amd64 1.2.0-3 [83.1 kB] build 20-Aug-2018 16:13:37 Get:89 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-gi amd64 3.20.0-0ubuntu1 [153 kB] build 20-Aug-2018 16:13:37 Get:90 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 shared-mime-info amd64 1.5-2ubuntu0.2 [405 kB] build 20-Aug-2018 16:13:37 Get:91 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 xdg-user-dirs amd64 0.15-2ubuntu6.16.04.1 [61.8 kB] build 20-Aug-2018 16:13:37 Get:92 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 20-Aug-2018 16:13:38 Get:93 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 binutils amd64 2.26.1-1ubuntu1~16.04.6 [2311 kB] build 20-Aug-2018 16:13:38 Get:94 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc-dev-bin amd64 2.23-0ubuntu10 [68.7 kB] build 20-Aug-2018 16:13:38 Get:95 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 linux-libc-dev amd64 4.4.0-133.159 [861 kB] build 20-Aug-2018 16:13:38 Get:96 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc6-dev amd64 2.23-0ubuntu10 [2079 kB] build 20-Aug-2018 16:13:38 Get:97 http://archive.ubuntu.com/ubuntu xenial/main amd64 libisl15 amd64 0.16.1-1 [524 kB] build 20-Aug-2018 16:13:38 Get:98 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 cpp-5 amd64 5.4.0-6ubuntu1~16.04.10 [7671 kB] build 20-Aug-2018 16:13:38 Get:99 http://archive.ubuntu.com/ubuntu xenial/main amd64 cpp amd64 4:5.3.1-1ubuntu1 [27.7 kB] build 20-Aug-2018 16:13:38 Get:100 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcc1-0 amd64 5.4.0-6ubuntu1~16.04.10 [38.8 kB] build 20-Aug-2018 16:13:38 Get:101 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgomp1 amd64 5.4.0-6ubuntu1~16.04.10 [55.1 kB] build 20-Aug-2018 16:13:38 Get:102 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libitm1 amd64 5.4.0-6ubuntu1~16.04.10 [27.4 kB] build 20-Aug-2018 16:13:38 Get:103 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libatomic1 amd64 5.4.0-6ubuntu1~16.04.10 [8888 B] build 20-Aug-2018 16:13:38 Get:104 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasan2 amd64 5.4.0-6ubuntu1~16.04.10 [264 kB] build 20-Aug-2018 16:13:39 Get:105 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 liblsan0 amd64 5.4.0-6ubuntu1~16.04.10 [105 kB] build 20-Aug-2018 16:13:39 Get:106 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtsan0 amd64 5.4.0-6ubuntu1~16.04.10 [244 kB] build 20-Aug-2018 16:13:39 Get:107 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libubsan0 amd64 5.4.0-6ubuntu1~16.04.10 [95.3 kB] build 20-Aug-2018 16:13:39 Get:108 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcilkrts5 amd64 5.4.0-6ubuntu1~16.04.10 [40.1 kB] build 20-Aug-2018 16:13:39 Get:109 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmpx0 amd64 5.4.0-6ubuntu1~16.04.10 [9764 B] build 20-Aug-2018 16:13:39 Get:110 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB] build 20-Aug-2018 16:13:40 Get:111 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgcc-5-dev amd64 5.4.0-6ubuntu1~16.04.10 [2228 kB] build 20-Aug-2018 16:13:40 Get:112 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5 amd64 5.4.0-6ubuntu1~16.04.10 [8426 kB] build 20-Aug-2018 16:13:40 Get:113 http://archive.ubuntu.com/ubuntu xenial/main amd64 gcc amd64 4:5.3.1-1ubuntu1 [5244 B] build 20-Aug-2018 16:13:40 Get:114 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++-5-dev amd64 5.4.0-6ubuntu1~16.04.10 [1426 kB] build 20-Aug-2018 16:13:41 Get:115 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 g++-5 amd64 5.4.0-6ubuntu1~16.04.10 [8319 kB] build 20-Aug-2018 16:13:41 Get:116 http://archive.ubuntu.com/ubuntu xenial/main amd64 g++ amd64 4:5.3.1-1ubuntu1 [1504 B] build 20-Aug-2018 16:13:41 Get:117 http://archive.ubuntu.com/ubuntu xenial/main amd64 make amd64 4.1-6 [151 kB] build 20-Aug-2018 16:13:41 Get:118 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdpkg-perl all 1.18.4ubuntu1.4 [195 kB] build 20-Aug-2018 16:13:41 Get:119 http://archive.ubuntu.com/ubuntu xenial/main amd64 xz-utils amd64 5.1.1alpha+20120614-2ubuntu2 [78.8 kB] build 20-Aug-2018 16:13:41 Get:120 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 patch amd64 2.7.5-1ubuntu0.16.04.1 [90.5 kB] build 20-Aug-2018 16:13:41 Get:121 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dpkg-dev all 1.18.4ubuntu1.4 [584 kB] build 20-Aug-2018 16:13:41 Get:122 http://archive.ubuntu.com/ubuntu xenial/main amd64 build-essential amd64 12.1ubuntu2 [4758 B] build 20-Aug-2018 16:13:42 Get:123 http://archive.ubuntu.com/ubuntu xenial/main amd64 libfakeroot amd64 1.20.2-1ubuntu1 [25.5 kB] build 20-Aug-2018 16:13:42 Get:124 http://archive.ubuntu.com/ubuntu xenial/main amd64 fakeroot amd64 1.20.2-1ubuntu1 [61.8 kB] build 20-Aug-2018 16:13:42 Get:125 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 20-Aug-2018 16:13:42 Get:126 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 20-Aug-2018 16:13:42 Get:127 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB] build 20-Aug-2018 16:13:42 Get:128 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 20-Aug-2018 16:13:42 Get:129 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 20-Aug-2018 16:13:42 Get:130 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarmadillo6 amd64 1:6.500.5+dfsg-1 [75.2 kB] build 20-Aug-2018 16:13:43 Get:131 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 20-Aug-2018 16:13:43 Get:132 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 20-Aug-2018 16:13:43 Get:133 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libepsilon1 amd64 0.9.2-3ubuntu1 [41.0 kB] build 20-Aug-2018 16:13:43 Get:134 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libfreexl1 amd64 1.0.2-1 [33.6 kB] build 20-Aug-2018 16:13:43 Get:135 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-3.5.0 amd64 3.5.0-1ubuntu2 [477 kB] build 20-Aug-2018 16:13:43 Get:136 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-c1v5 amd64 3.5.0-1ubuntu2 [52.4 kB] build 20-Aug-2018 16:13:43 Get:137 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgif7 amd64 5.1.4-0.3~16.04 [30.5 kB] build 20-Aug-2018 16:13:43 Get:138 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] build 20-Aug-2018 16:13:43 Get:139 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf4-0-alt amd64 4.2.10-3.2 [264 kB] build 20-Aug-2018 16:13:43 Get:140 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libaec0 amd64 0.3.2-1 [18.0 kB] build 20-Aug-2018 16:13:43 Get:141 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsz2 amd64 0.3.2-1 [5048 B] build 20-Aug-2018 16:13:44 Get:142 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf5-10 amd64 1.8.16+docs-4ubuntu1 [995 kB] build 20-Aug-2018 16:13:44 Get:143 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjasper1 amd64 1.900.1-debian1-2.4ubuntu1.2 [131 kB] build 20-Aug-2018 16:13:44 Get:144 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libminizip1 amd64 1.1-8 [20.3 kB] build 20-Aug-2018 16:13:44 Get:145 http://archive.ubuntu.com/ubuntu xenial/universe amd64 liburiparser1 amd64 0.8.4-1 [38.0 kB] build 20-Aug-2018 16:13:44 Get:146 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlbase1 amd64 1.3.0-1 [43.9 kB] build 20-Aug-2018 16:13:44 Get:147 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmldom1 amd64 1.3.0-1 [175 kB] build 20-Aug-2018 16:13:44 Get:148 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlengine1 amd64 1.3.0-1 [77.1 kB] build 20-Aug-2018 16:13:44 Get:149 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 mysql-common all 5.7.23-0ubuntu0.16.04.1 [15.4 kB] build 20-Aug-2018 16:13:44 Get:150 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmysqlclient20 amd64 5.7.23-0ubuntu0.16.04.1 [812 kB] build 20-Aug-2018 16:13:44 Get:151 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libnetcdf11 amd64 1:4.4.0-2 [286 kB] build 20-Aug-2018 16:13:45 Get:152 http://archive.ubuntu.com/ubuntu xenial/main amd64 libltdl7 amd64 2.4.6-0.1 [38.3 kB] build 20-Aug-2018 16:13:45 Get:153 http://archive.ubuntu.com/ubuntu xenial/main amd64 libodbc1 amd64 2.3.1-4.1 [180 kB] build 20-Aug-2018 16:13:45 Get:154 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-data all 4.9.2-2 [4004 kB] build 20-Aug-2018 16:13:45 Get:155 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libproj9 amd64 4.9.2-2 [143 kB] build 20-Aug-2018 16:13:45 Get:156 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libogdi3.2 amd64 3.2.0~beta2-7.1build1 [212 kB] build 20-Aug-2018 16:13:45 Get:157 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 libopenjp2-7 amd64 2.1.0-2.1ubuntu0.1 [103 kB] build 20-Aug-2018 16:13:45 Get:158 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfreetype6 amd64 2.6.1-0.1ubuntu2.3 [316 kB] build 20-Aug-2018 16:13:46 Get:159 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfontconfig1 amd64 2.11.94-0ubuntu1.1 [131 kB] build 20-Aug-2018 16:13:46 Get:160 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtiff5 amd64 4.0.6-1ubuntu0.4 [148 kB] build 20-Aug-2018 16:13:46 Get:161 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpoppler58 amd64 0.41.0-0ubuntu1.7 [758 kB] build 20-Aug-2018 16:13:46 Get:162 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpq5 amd64 9.5.14-0ubuntu0.16.04 [78.8 kB] build 20-Aug-2018 16:13:46 Get:163 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libspatialite7 amd64 4.3.0a-5 [1222 kB] build 20-Aug-2018 16:13:46 Get:164 http://archive.ubuntu.com/ubuntu xenial/main amd64 libwebp5 amd64 0.4.4-1 [165 kB] build 20-Aug-2018 16:13:46 Get:165 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libxerces-c3.1 amd64 3.1.3+debian-1 [842 kB] build 20-Aug-2018 16:13:46 Get:166 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst amd64 2.3.1-4.1 [13.1 kB] build 20-Aug-2018 16:13:46 Get:167 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst1debian2 amd64 2.3.1-4.1 [41.1 kB] build 20-Aug-2018 16:13:46 Get:168 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgdal1i amd64 1.11.3+dfsg-3build2 [4013 kB] build 20-Aug-2018 16:13:47 Get:169 http://archive.ubuntu.com/ubuntu xenial/universe amd64 gdal-bin amd64 1.11.3+dfsg-3build2 [226 kB] build 20-Aug-2018 16:13:47 Get:170 http://archive.ubuntu.com/ubuntu xenial/main amd64 libalgorithm-diff-perl all 1.19.03-1 [47.6 kB] build 20-Aug-2018 16:13:47 Get:171 http://archive.ubuntu.com/ubuntu xenial/main amd64 libalgorithm-diff-xs-perl amd64 0.04-4build1 [11.0 kB] build 20-Aug-2018 16:13:47 Get:172 http://archive.ubuntu.com/ubuntu xenial/main amd64 libalgorithm-merge-perl all 0.08-3 [12.0 kB] build 20-Aug-2018 16:13:47 Get:173 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1-dev amd64 2.1.0-7ubuntu0.16.04.3 [115 kB] build 20-Aug-2018 16:13:47 Get:174 http://archive.ubuntu.com/ubuntu xenial/main amd64 libfile-fcntllock-perl amd64 0.22-3 [32.0 kB] build 20-Aug-2018 16:13:47 Get:175 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7 amd64 2.7.12-1ubuntu0~16.04.3 [1070 kB] build 20-Aug-2018 16:13:47 Get:176 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-dev amd64 2.7.12-1ubuntu0~16.04.3 [27.8 MB] build 20-Aug-2018 16:13:48 Get:177 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython-dev amd64 2.7.12-1~16.04 [7840 B] build 20-Aug-2018 16:13:49 Get:178 http://archive.ubuntu.com/ubuntu xenial/main amd64 manpages-dev all 4.04-2 [2048 kB] build 20-Aug-2018 16:13:49 Get:179 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-decorator all 4.0.6-1 [9326 B] build 20-Aug-2018 16:13:49 Get:180 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7-dev amd64 2.7.12-1ubuntu0~16.04.3 [276 kB] build 20-Aug-2018 16:13:49 Get:181 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-dev amd64 2.7.12-1~16.04 [1186 B] build 20-Aug-2018 16:13:49 Get:182 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-numpy amd64 1:1.11.0-1ubuntu1 [1763 kB] build 20-Aug-2018 16:13:49 Get:183 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-gdal amd64 1.11.3+dfsg-3build2 [423 kB] build 20-Aug-2018 16:13:49 Get:184 http://archive.ubuntu.com/ubuntu xenial/main amd64 libwebpmux1 amd64 0.4.4-1 [14.2 kB] build 20-Aug-2018 16:13:50 Get:185 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-pil amd64 3.1.2-0ubuntu1.1 [312 kB] build 20-Aug-2018 16:13:50 Get:186 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-imaging all 3.1.2-0ubuntu1.1 [4596 B] build 20-Aug-2018 16:13:50 Get:187 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-pycurl amd64 7.43.0-1ubuntu1 [42.3 kB] build 20-Aug-2018 16:13:50 Get:188 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3-software-properties all 0.96.20.7 [20.3 kB] build 20-Aug-2018 16:13:50 Get:189 http://archive.ubuntu.com/ubuntu xenial/main amd64 rename all 0.20-4 [12.0 kB] build 20-Aug-2018 16:13:50 Get:190 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 software-properties-common all 0.96.20.7 [9452 B] build 20-Aug-2018 16:13:50 Get:191 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 unattended-upgrades all 0.90ubuntu0.9 [32.3 kB] build 20-Aug-2018 16:13:50 Get:192 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-bin amd64 4.9.2-2 [31.3 kB] build 20-Aug-2018 16:13:50 Get:193 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-scipy amd64 0.17.0-1 [8733 kB] build 20-Aug-2018 16:13:51 debconf: delaying package configuration, since apt-utils is not installed build 20-Aug-2018 16:13:51 Fetched 134 MB in 15s (8434 kB/s) build 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libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 20-Aug-2018 16:16:05 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 20-Aug-2018 16:16:05 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ... build 20-Aug-2018 16:16:05 Setting up libxtables11:amd64 (1.6.0-2ubuntu3) ... build 20-Aug-2018 16:16:05 Setting up netbase (5.3) ... build 20-Aug-2018 16:16:06 Setting up ucf (3.0036) ... build 20-Aug-2018 16:16:06 debconf: unable to initialize frontend: Dialog build 20-Aug-2018 16:16:06 debconf: (TERM is not set, so the dialog frontend is not usable.) build 20-Aug-2018 16:16:06 debconf: falling back to frontend: Readline build 20-Aug-2018 16:16:06 Setting up libcap-ng0:amd64 (0.7.7-1) ... build 20-Aug-2018 16:16:06 Setting up libdbus-1-3:amd64 (1.10.6-1ubuntu3.3) ... build 20-Aug-2018 16:16:06 Setting up dbus (1.10.6-1ubuntu3.3) ... build 20-Aug-2018 16:16:07 Setting up libgirepository-1.0-1:amd64 (1.46.0-3ubuntu1) ... build 20-Aug-2018 16:16:07 Setting up gir1.2-glib-2.0:amd64 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provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 20-Aug-2018 16:16:39 Setting up libarpack2 (3.3.0-1build2) ... build 20-Aug-2018 16:16:40 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 20-Aug-2018 16:16:40 Setting up libdap17v5:amd64 (3.15.1-7) ... build 20-Aug-2018 16:16:40 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 20-Aug-2018 16:16:40 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 20-Aug-2018 16:16:40 Setting up libfreexl1:amd64 (1.0.2-1) ... build 20-Aug-2018 16:16:40 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 20-Aug-2018 16:16:40 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 20-Aug-2018 16:16:41 Setting up libgif7:amd64 (5.1.4-0.3~16.04) ... build 20-Aug-2018 16:16:41 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 20-Aug-2018 16:16:41 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 20-Aug-2018 16:16:41 Setting up libaec0:amd64 (0.3.2-1) ... build 20-Aug-2018 16:16:41 Setting up libsz2:amd64 (0.3.2-1) ... build 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libodbc1:amd64 (2.3.1-4.1) ... build 20-Aug-2018 16:16:43 Setting up proj-data (4.9.2-2) ... build 20-Aug-2018 16:16:43 Setting up libproj9 (4.9.2-2) ... build 20-Aug-2018 16:16:43 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 20-Aug-2018 16:16:44 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 20-Aug-2018 16:16:44 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 20-Aug-2018 16:16:44 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 20-Aug-2018 16:16:44 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 20-Aug-2018 16:16:45 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 20-Aug-2018 16:16:45 Setting up libpq5:amd64 (9.5.14-0ubuntu0.16.04) ... build 20-Aug-2018 16:16:45 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 20-Aug-2018 16:16:45 Setting up libwebp5:amd64 (0.4.4-1) ... build 20-Aug-2018 16:16:45 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 20-Aug-2018 16:16:45 Setting up libalgorithm-diff-perl (1.19.03-1) ... build 20-Aug-2018 16:16:45 Setting up libalgorithm-diff-xs-perl (0.04-4build1) ... build 20-Aug-2018 16:16:45 Setting up libalgorithm-merge-perl (0.08-3) ... build 20-Aug-2018 16:16:46 Setting up libexpat1-dev:amd64 (2.1.0-7ubuntu0.16.04.3) ... build 20-Aug-2018 16:16:46 Setting up libfile-fcntllock-perl (0.22-3) ... build 20-Aug-2018 16:16:46 Setting up libpython2.7:amd64 (2.7.12-1ubuntu0~16.04.3) ... build 20-Aug-2018 16:16:46 Setting up libpython2.7-dev:amd64 (2.7.12-1ubuntu0~16.04.3) ... build 20-Aug-2018 16:16:46 Setting up libpython-dev:amd64 (2.7.12-1~16.04) ... build 20-Aug-2018 16:16:46 Setting up manpages-dev (4.04-2) ... build 20-Aug-2018 16:16:46 Setting up python-decorator (4.0.6-1) ... build 20-Aug-2018 16:16:47 Setting up python2.7-dev (2.7.12-1ubuntu0~16.04.3) ... build 20-Aug-2018 16:16:48 Setting up python-dev (2.7.12-1~16.04) ... build 20-Aug-2018 16:16:48 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 20-Aug-2018 16:16:50 Setting up libwebpmux1:amd64 (0.4.4-1) ... build 20-Aug-2018 16:16:50 Setting up python-pil:amd64 (3.1.2-0ubuntu1.1) ... build 20-Aug-2018 16:16:51 Setting up python-imaging (3.1.2-0ubuntu1.1) ... build 20-Aug-2018 16:16:52 Setting up rename (0.20-4) ... build 20-Aug-2018 16:16:52 update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode build 20-Aug-2018 16:16:52 Setting up proj-bin (4.9.2-2) ... build 20-Aug-2018 16:16:52 Setting up python-scipy (0.17.0-1) ... build 20-Aug-2018 16:16:55 Setting up python3 (3.5.1-3) ... build 20-Aug-2018 16:16:55 running python rtupdate hooks for python3.5... build 20-Aug-2018 16:16:55 running python post-rtupdate hooks for python3.5... build 20-Aug-2018 16:16:55 Setting up lsb-release (9.20160110ubuntu0.2) ... build 20-Aug-2018 16:16:55 Setting up python3-apt (1.1.0~beta1ubuntu0.16.04.2) ... build 20-Aug-2018 16:16:56 Setting up python3-dbus (1.2.0-3) ... build 20-Aug-2018 16:16:56 Setting up python3-gi (3.20.0-0ubuntu1) ... build 20-Aug-2018 16:16:57 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 20-Aug-2018 16:16:57 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:16:57 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:16:57 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:16:58 Setting up python3-pycurl (7.43.0-1ubuntu1) ... build 20-Aug-2018 16:16:59 Setting up python3-software-properties (0.96.20.7) ... build 20-Aug-2018 16:16:59 Setting up software-properties-common (0.96.20.7) ... build 20-Aug-2018 16:16:59 Setting up unattended-upgrades (0.90ubuntu0.9) ... build 20-Aug-2018 16:17:00 debconf: unable to initialize frontend: Dialog build 20-Aug-2018 16:17:00 debconf: (TERM is not set, so the dialog frontend is not usable.) build 20-Aug-2018 16:17:00 debconf: falling back to frontend: Readline build 20-Aug-2018 16:17:00 build 20-Aug-2018 16:17:00 Creating config file /etc/apt/apt.conf.d/20auto-upgrades with new version build 20-Aug-2018 16:17:00 build 20-Aug-2018 16:17:00 Creating config file /etc/apt/apt.conf.d/50unattended-upgrades with new version build 20-Aug-2018 16:17:00 invoke-rc.d: could not determine current runlevel build 20-Aug-2018 16:17:00 invoke-rc.d: policy-rc.d denied execution of start. build 20-Aug-2018 16:17:00 Setting up dh-python (2.20151103ubuntu1.1) ... build 20-Aug-2018 16:17:01 Setting up odbcinst (2.3.1-4.1) ... build 20-Aug-2018 16:17:01 Processing triggers for systemd (229-4ubuntu21.2) ... build 20-Aug-2018 16:17:01 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 20-Aug-2018 16:17:01 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 20-Aug-2018 16:17:01 Processing triggers for dbus (1.10.6-1ubuntu3.3) ... build 20-Aug-2018 16:17:02 Official stable UbuntuGIS packages. build 20-Aug-2018 16:17:02 build 20-Aug-2018 16:17:02 build 20-Aug-2018 16:17:02 More info: https://launchpad.net/~ubuntugis/+archive/ubuntu/ppa build 20-Aug-2018 16:17:03 gpg: keyring `/tmp/tmppdr4wnf3/secring.gpg' created build 20-Aug-2018 16:17:03 gpg: keyring `/tmp/tmppdr4wnf3/pubring.gpg' created build 20-Aug-2018 16:17:03 gpg: requesting key 314DF160 from hkp server keyserver.ubuntu.com build 20-Aug-2018 16:17:03 gpg: /tmp/tmppdr4wnf3/trustdb.gpg: trustdb created build 20-Aug-2018 16:17:03 gpg: key 314DF160: public key "Launchpad ubuntugis-stable" imported build 20-Aug-2018 16:17:03 gpg: Total number processed: 1 build 20-Aug-2018 16:17:03 gpg: imported: 1 (RSA: 1) build 20-Aug-2018 16:17:03 OK build 20-Aug-2018 16:17:04 Collecting pip==9.0.3 build 20-Aug-2018 16:17:04 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 20-Aug-2018 16:17:04 Installing collected packages: pip build 20-Aug-2018 16:17:04 Found existing installation: pip 8.1.1 build 20-Aug-2018 16:17:04 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 20-Aug-2018 16:17:05 Successfully installed pip-9.0.3 build 20-Aug-2018 16:17:05 You are using pip version 9.0.3, however version 18.0 is available. build 20-Aug-2018 16:17:05 You should consider upgrading via the 'pip install --upgrade pip' command. build 20-Aug-2018 16:17:05 Collecting cython>=0.23.4 (from -r /home/clowder/requirements.txt (line 1)) build 20-Aug-2018 16:17:06 Downloading https://files.pythonhosted.org/packages/9c/ae/be506d47f77fd31101a29eb740120f39050423f941cb0a461e4247330a47/Cython-0.28.5-cp27-cp27mu-manylinux1_x86_64.whl (3.3MB) build 20-Aug-2018 16:17:07 Requirement already satisfied: numpy>=1.10.4 in /usr/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 2)) build 20-Aug-2018 16:17:07 Collecting shapely>=1.3.2 (from -r /home/clowder/requirements.txt (line 3)) build 20-Aug-2018 16:17:07 Downloading https://files.pythonhosted.org/packages/81/d1/b8e1b089a8ddd6df74be583d70373eac55c725c6197c115efbd3c3e1509f/Shapely-1.6.4.post2-cp27-cp27mu-manylinux1_x86_64.whl (1.4MB) build 20-Aug-2018 16:17:07 Collecting pygeoprocessing==0.2.2 (from -r /home/clowder/requirements.txt (line 4)) build 20-Aug-2018 16:17:07 Downloading https://files.pythonhosted.org/packages/5a/00/23b0d22a568308d8626b493f8da4780ac29c29d62a065f8795803f64148f/pygeoprocessing-0.2.2.zip (532kB) build 20-Aug-2018 16:17:08 Requirement already satisfied: pika>=0.10.0 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 5)) build 20-Aug-2018 16:17:08 Requirement already satisfied: requests>=2.9.1 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 6)) build 20-Aug-2018 16:17:08 Requirement already satisfied: scipy in /usr/lib/python2.7/dist-packages (from pygeoprocessing==0.2.2->-r /home/clowder/requirements.txt (line 4)) build 20-Aug-2018 16:17:08 Requirement already satisfied: gdal in /usr/lib/python2.7/dist-packages (from pygeoprocessing==0.2.2->-r /home/clowder/requirements.txt (line 4)) build 20-Aug-2018 16:17:08 Requirement already satisfied: certifi>=2017.4.17 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 20-Aug-2018 16:17:08 Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 20-Aug-2018 16:17:08 Requirement already satisfied: idna<2.7,>=2.5 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 20-Aug-2018 16:17:08 Requirement already satisfied: urllib3<1.23,>=1.21.1 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 20-Aug-2018 16:17:08 Installing collected packages: cython, shapely, pygeoprocessing build 20-Aug-2018 16:17:08 Running setup.py install for pygeoprocessing: started build 20-Aug-2018 16:17:33 Running setup.py install for pygeoprocessing: finished with status 'done' build 20-Aug-2018 16:17:33 Successfully installed cython-0.28.5 pygeoprocessing-0.2.2 shapely-1.6.4.post2 build 20-Aug-2018 16:17:33 You are using pip version 9.0.3, however version 18.0 is available. build 20-Aug-2018 16:17:33 You should consider upgrading via the 'pip install --upgrade pip' command. build 20-Aug-2018 16:17:41 Removing intermediate container b0375466dccc build 20-Aug-2018 16:17:41 ---> 5db704a61d2d build 20-Aug-2018 16:17:41 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 20-Aug-2018 16:17:41 ---> Running in 318505ce1095 build 20-Aug-2018 16:17:42 Removing intermediate container 318505ce1095 build 20-Aug-2018 16:17:42 ---> d20a5905417b build 20-Aug-2018 16:17:42 Step 6/8 : CMD ["extractor"] build 20-Aug-2018 16:17:42 ---> Running in c1d2cad30601 build 20-Aug-2018 16:17:43 Removing intermediate container c1d2cad30601 build 20-Aug-2018 16:17:43 ---> ce9b7f1ed3e3 build 20-Aug-2018 16:17:43 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geotiff.metadata" MAIN_SCRIPT="ncsa.image.geotiff.py" build 20-Aug-2018 16:17:43 ---> Running in c65f4bb54687 build 20-Aug-2018 16:17:43 Removing intermediate container c65f4bb54687 build 20-Aug-2018 16:17:43 ---> d11f8bac6eb8 build 20-Aug-2018 16:17:43 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json /home/clowder/ build 20-Aug-2018 16:17:43 ---> e364ab1f18d8 build 20-Aug-2018 16:17:43 Successfully built e364ab1f18d8 build 20-Aug-2018 16:17:44 Successfully tagged 31461:latest build 20-Aug-2018 16:17:44 Untagged: 31461:latest build 20-Aug-2018 16:17:44 Sending build context to Docker daemon 1.351MB build 20-Aug-2018 16:17:44 build 20-Aug-2018 16:17:44 Step 1/8 : FROM clowder/pyclowder:2 build 20-Aug-2018 16:17:44 ---> b27d04debca2 build 20-Aug-2018 16:17:44 Step 2/8 : MAINTAINER Yong Wook Kim build 20-Aug-2018 16:17:44 ---> Using cache build 20-Aug-2018 16:17:44 ---> ec56e813cd0a build 20-Aug-2018 16:17:44 Step 3/8 : COPY requirements.txt /home/clowder/ build 20-Aug-2018 16:17:44 ---> 7e2c6635a375 build 20-Aug-2018 16:17:44 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full && pip install --upgrade pip==9.0.3 && pip install --upgrade -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 20-Aug-2018 16:17:45 ---> Running in 8a90defa86f4 build 20-Aug-2018 16:17:45 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 20-Aug-2018 16:17:45 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 20-Aug-2018 16:17:45 Get:3 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [88.1 kB] build 20-Aug-2018 16:17:45 Get:4 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [688 kB] build 20-Aug-2018 16:17:45 Get:5 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 20-Aug-2018 16:17:45 Get:6 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [465 kB] build 20-Aug-2018 16:17:45 Get:7 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3748 B] build 20-Aug-2018 16:17:46 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 20-Aug-2018 16:17:46 Get:9 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 20-Aug-2018 16:17:46 Get:10 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 20-Aug-2018 16:17:47 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 20-Aug-2018 16:17:47 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 20-Aug-2018 16:17:47 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 20-Aug-2018 16:17:47 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 20-Aug-2018 16:17:47 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [275 kB] build 20-Aug-2018 16:17:47 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1073 kB] build 20-Aug-2018 16:17:47 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 20-Aug-2018 16:17:47 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [876 kB] build 20-Aug-2018 16:17:47 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 20-Aug-2018 16:17:47 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7343 B] build 20-Aug-2018 16:17:47 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8086 B] build 20-Aug-2018 16:17:48 Fetched 25.5 MB in 3s (7554 kB/s) build 20-Aug-2018 16:17:49 Reading package lists... build 20-Aug-2018 16:17:50 Reading package lists... build 20-Aug-2018 16:17:50 Building dependency tree... build 20-Aug-2018 16:17:50 Reading state information... build 20-Aug-2018 16:17:50 The following additional packages will be installed: build 20-Aug-2018 16:17:50 fontconfig-config fonts-dejavu-core gcc-5-base krb5-locales libaec0 build 20-Aug-2018 16:17:50 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 20-Aug-2018 16:17:50 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 20-Aug-2018 16:17:50 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 20-Aug-2018 16:17:50 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 20-Aug-2018 16:17:50 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 20-Aug-2018 16:17:50 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 20-Aug-2018 16:17:50 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 20-Aug-2018 16:17:50 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 20-Aug-2018 16:17:50 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 20-Aug-2018 16:17:50 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 20-Aug-2018 16:17:50 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 20-Aug-2018 16:17:50 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 20-Aug-2018 16:17:50 libsasl2-modules-db libspatialite7 libstdc++6 libsuperlu4 libsz2 libtasn1-6 build 20-Aug-2018 16:17:50 libtiff5 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 build 20-Aug-2018 16:17:50 mysql-common odbcinst odbcinst1debian2 proj-bin proj-data python-numpy build 20-Aug-2018 16:17:50 sgml-base ucf xml-core build 20-Aug-2018 16:17:50 Suggested packages: build 20-Aug-2018 16:17:50 gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools build 20-Aug-2018 16:17:50 libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc odbc-postgresql build 20-Aug-2018 16:17:50 tdsodbc unixodbc-bin ogdi-bin poppler-data libsasl2-modules-otp build 20-Aug-2018 16:17:50 libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit build 20-Aug-2018 16:17:50 | libsasl2-modules-gssapi-heimdal p7zip-rar gcc gfortran python-dev build 20-Aug-2018 16:17:50 python-nose python-numpy-dbg python-numpy-doc sgml-base-doc debhelper build 20-Aug-2018 16:17:50 The following NEW packages will be installed: build 20-Aug-2018 16:17:50 file fontconfig-config fonts-dejavu-core gdal-bin krb5-locales libaec0 build 20-Aug-2018 16:17:50 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 20-Aug-2018 16:17:50 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 20-Aug-2018 16:17:50 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 20-Aug-2018 16:17:50 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 20-Aug-2018 16:17:50 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 20-Aug-2018 16:17:50 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 20-Aug-2018 16:17:50 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 20-Aug-2018 16:17:50 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 20-Aug-2018 16:17:50 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 20-Aug-2018 16:17:50 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 20-Aug-2018 16:17:50 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 20-Aug-2018 16:17:50 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 20-Aug-2018 16:17:50 libsasl2-modules-db libspatialite7 libsuperlu4 libsz2 libtasn1-6 libtiff5 build 20-Aug-2018 16:17:50 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 mysql-common build 20-Aug-2018 16:17:50 odbcinst odbcinst1debian2 p7zip-full proj-bin proj-data python-gdal build 20-Aug-2018 16:17:50 python-numpy sgml-base ucf xml-core build 20-Aug-2018 16:17:50 The following packages will be upgraded: build 20-Aug-2018 16:17:50 gcc-5-base libstdc++6 build 20-Aug-2018 16:17:51 2 upgraded, 92 newly installed, 0 to remove and 19 not upgraded. build 20-Aug-2018 16:17:51 Need to get 36.2 MB of archives. build 20-Aug-2018 16:17:51 After this operation, 146 MB of additional disk space will be used. build 20-Aug-2018 16:17:51 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 20-Aug-2018 16:17:51 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 20-Aug-2018 16:17:51 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 20-Aug-2018 16:17:51 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 20-Aug-2018 16:17:51 Get:5 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 20-Aug-2018 16:17:51 Get:6 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 20-Aug-2018 16:17:51 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 20-Aug-2018 16:17:51 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 20-Aug-2018 16:17:51 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 20-Aug-2018 16:17:52 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.1 [216 kB] build 20-Aug-2018 16:17:52 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.1 [21.2 kB] build 20-Aug-2018 16:17:52 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 20-Aug-2018 16:17:52 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 20-Aug-2018 16:17:52 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 20-Aug-2018 16:17:52 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 20-Aug-2018 16:17:52 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 20-Aug-2018 16:17:52 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 20-Aug-2018 16:17:52 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 20-Aug-2018 16:17:52 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 20-Aug-2018 16:17:52 Get:20 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 20-Aug-2018 16:17:52 Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 20-Aug-2018 16:17:52 Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 20-Aug-2018 16:17:52 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 20-Aug-2018 16:17:52 Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 20-Aug-2018 16:17:52 Get:25 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libk5crypto3 amd64 1.13.2+dfsg-5ubuntu2 [81.2 kB] build 20-Aug-2018 16:17:52 Get:26 http://archive.ubuntu.com/ubuntu xenial/main amd64 libkeyutils1 amd64 1.5.9-8ubuntu1 [9904 B] build 20-Aug-2018 16:17:52 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-3 amd64 1.13.2+dfsg-5ubuntu2 [273 kB] build 20-Aug-2018 16:17:52 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi-krb5-2 amd64 1.13.2+dfsg-5ubuntu2 [120 kB] build 20-Aug-2018 16:17:52 Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhcrypto4-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [85.0 kB] build 20-Aug-2018 16:17:52 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimbase1-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [29.3 kB] build 20-Aug-2018 16:17:52 Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwind0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [47.8 kB] build 20-Aug-2018 16:17:52 Get:32 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhx509-5-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [107 kB] build 20-Aug-2018 16:17:52 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 20-Aug-2018 16:17:52 Get:34 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 20-Aug-2018 16:17:52 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 20-Aug-2018 16:17:52 Get:36 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 20-Aug-2018 16:17:52 Get:37 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 20-Aug-2018 16:17:52 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu3.3 [161 kB] build 20-Aug-2018 16:17:52 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d-1ubuntu0.1 [54.4 kB] build 20-Aug-2018 16:17:52 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcurl3-gnutls amd64 7.47.0-1ubuntu2.8 [185 kB] build 20-Aug-2018 16:17:52 Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 20-Aug-2018 16:17:52 Get:42 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules amd64 2.1.26.dfsg1-14build1 [47.5 kB] build 20-Aug-2018 16:17:52 Get:43 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 20-Aug-2018 16:17:52 Get:44 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 20-Aug-2018 16:17:52 Get:45 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 20-Aug-2018 16:17:52 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 20-Aug-2018 16:17:52 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB] build 20-Aug-2018 16:17:52 Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB] build 20-Aug-2018 16:17:52 Get:49 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 20-Aug-2018 16:17:52 Get:50 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 20-Aug-2018 16:17:52 Get:51 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarmadillo6 amd64 1:6.500.5+dfsg-1 [75.2 kB] build 20-Aug-2018 16:17:52 Get:52 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 20-Aug-2018 16:17:52 Get:53 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 20-Aug-2018 16:17:52 Get:54 http://archive.ubuntu.com/ubuntu 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amd64 1:1.11.0-1ubuntu1 [1763 kB] build 20-Aug-2018 16:17:53 Get:93 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-gdal amd64 1.11.3+dfsg-3build2 [423 kB] build 20-Aug-2018 16:17:53 Get:94 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-bin amd64 4.9.2-2 [31.3 kB] build 20-Aug-2018 16:17:54 debconf: delaying package configuration, since apt-utils is not installed build 20-Aug-2018 16:17:54 Fetched 36.2 MB in 2s (13.9 MB/s) build 20-Aug-2018 16:17:54 Selecting previously unselected package sgml-base. build 20-Aug-2018 16:17:54 (Reading database ... build 20-Aug-2018 16:17:54 (Reading database ... 5% build 20-Aug-2018 16:17:54 (Reading database ... 10% build 20-Aug-2018 16:17:54 (Reading database ... 15% build 20-Aug-2018 16:17:54 (Reading database ... 20% build 20-Aug-2018 16:17:54 (Reading database ... 25% build 20-Aug-2018 16:17:54 (Reading database ... 30% build 20-Aug-2018 16:17:54 (Reading database ... 35% build 20-Aug-2018 16:17:54 (Reading database ... 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16:18:44 Setting up sgml-base (1.26+nmu4ubuntu1) ... build 20-Aug-2018 16:18:44 Setting up libjpeg-turbo8:amd64 (1.4.2-0ubuntu3.1) ... build 20-Aug-2018 16:18:44 Setting up liblcms2-2:amd64 (2.6-3ubuntu2) ... build 20-Aug-2018 16:18:44 Setting up libblas-common (3.6.0-2ubuntu2) ... build 20-Aug-2018 16:18:44 Setting up libblas3 (3.6.0-2ubuntu2) ... build 20-Aug-2018 16:18:44 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 20-Aug-2018 16:18:44 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 20-Aug-2018 16:18:45 Setting up libjbig0:amd64 (2.1-3.1) ... build 20-Aug-2018 16:18:45 Setting up libmagic1:amd64 (1:5.25-2ubuntu1.1) ... build 20-Aug-2018 16:18:45 Setting up file (1:5.25-2ubuntu1.1) ... build 20-Aug-2018 16:18:45 Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ... build 20-Aug-2018 16:18:45 Setting up libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ... build 20-Aug-2018 16:18:45 Setting up libhogweed4:amd64 (3.2-1ubuntu0.16.04.1) ... build 20-Aug-2018 16:18:45 Setting up libidn11:amd64 (1.32-3ubuntu1.2) ... build 20-Aug-2018 16:18:46 Setting up libp11-kit0:amd64 (0.23.2-5~ubuntu16.04.1) ... build 20-Aug-2018 16:18:46 Setting up libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 20-Aug-2018 16:18:46 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 20-Aug-2018 16:18:46 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ... build 20-Aug-2018 16:18:46 Setting up ucf (3.0036) ... build 20-Aug-2018 16:18:46 debconf: unable to initialize frontend: Dialog build 20-Aug-2018 16:18:46 debconf: (TERM is not set, so the dialog frontend is not usable.) build 20-Aug-2018 16:18:46 debconf: falling back to frontend: Readline build 20-Aug-2018 16:18:46 debconf: unable to initialize frontend: Readline build 20-Aug-2018 16:18:46 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) build 20-Aug-2018 16:18:46 debconf: falling back to frontend: Teletype build 20-Aug-2018 16:18:46 Setting up krb5-locales (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:18:47 Setting up libroken18-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:18:47 Setting up libasn1-8-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:18:47 Setting up libkrb5support0:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:18:47 Setting up libk5crypto3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:18:47 Setting up libkeyutils1:amd64 (1.5.9-8ubuntu1) ... build 20-Aug-2018 16:18:47 Setting up libkrb5-3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:18:47 Setting up libgssapi-krb5-2:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:18:47 Setting up libhcrypto4-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:18:48 Setting up libheimbase1-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:18:48 Setting up libwind0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:18:49 Setting up libhx509-5-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:18:49 Setting up libkrb5-26-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:18:49 Setting up libheimntlm0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:18:49 Setting up libgssapi3-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:18:49 Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-14build1) ... build 20-Aug-2018 16:18:49 Setting up libsasl2-2:amd64 (2.1.26.dfsg1-14build1) ... build 20-Aug-2018 16:18:50 Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu3.3) ... build 20-Aug-2018 16:18:50 Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d-1ubuntu0.1) ... build 20-Aug-2018 16:18:50 Setting up libcurl3-gnutls:amd64 (7.47.0-1ubuntu2.8) ... build 20-Aug-2018 16:18:50 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 20-Aug-2018 16:18:50 Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-14build1) ... build 20-Aug-2018 16:18:50 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ... build 20-Aug-2018 16:18:50 Setting up xml-core (0.13+nmu2) ... build 20-Aug-2018 16:18:51 Setting up fonts-dejavu-core (2.35-1) ... build 20-Aug-2018 16:18:52 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 20-Aug-2018 16:18:54 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 20-Aug-2018 16:18:54 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 20-Aug-2018 16:18:54 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 20-Aug-2018 16:18:54 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 20-Aug-2018 16:18:54 Setting up libarpack2 (3.3.0-1build2) ... build 20-Aug-2018 16:18:54 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 20-Aug-2018 16:18:55 Setting up libdap17v5:amd64 (3.15.1-7) ... build 20-Aug-2018 16:18:55 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 20-Aug-2018 16:18:55 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 20-Aug-2018 16:18:55 Setting up libfreexl1:amd64 (1.0.2-1) ... build 20-Aug-2018 16:18:55 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 20-Aug-2018 16:18:55 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 20-Aug-2018 16:18:55 Setting up libgif7:amd64 (5.1.4-0.3~16.04) ... build 20-Aug-2018 16:18:56 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 20-Aug-2018 16:18:56 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 20-Aug-2018 16:18:56 Setting up libaec0:amd64 (0.3.2-1) ... build 20-Aug-2018 16:18:56 Setting up libsz2:amd64 (0.3.2-1) ... build 20-Aug-2018 16:18:56 Setting up libhdf5-10:amd64 (1.8.16+docs-4ubuntu1) ... build 20-Aug-2018 16:18:56 Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.2) ... build 20-Aug-2018 16:18:56 Setting up libminizip1:amd64 (1.1-8) ... build 20-Aug-2018 16:18:56 Setting up liburiparser1:amd64 (0.8.4-1) ... build 20-Aug-2018 16:18:57 Setting up libkmlbase1:amd64 (1.3.0-1) ... build 20-Aug-2018 16:18:57 Setting up libkmldom1:amd64 (1.3.0-1) ... build 20-Aug-2018 16:18:57 Setting up libkmlengine1:amd64 (1.3.0-1) ... build 20-Aug-2018 16:18:57 Setting up mysql-common (5.7.23-0ubuntu0.16.04.1) ... build 20-Aug-2018 16:18:57 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 20-Aug-2018 16:18:57 Setting up libmysqlclient20:amd64 (5.7.23-0ubuntu0.16.04.1) ... build 20-Aug-2018 16:18:57 Setting up libnetcdf11 (1:4.4.0-2) ... build 20-Aug-2018 16:18:58 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 20-Aug-2018 16:18:58 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 20-Aug-2018 16:18:58 Setting up proj-data (4.9.2-2) ... build 20-Aug-2018 16:18:58 Setting up libproj9 (4.9.2-2) ... build 20-Aug-2018 16:18:58 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 20-Aug-2018 16:18:59 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 20-Aug-2018 16:18:59 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 20-Aug-2018 16:18:59 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 20-Aug-2018 16:18:59 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 20-Aug-2018 16:18:59 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 20-Aug-2018 16:18:59 Setting up libpq5:amd64 (9.5.14-0ubuntu0.16.04) ... build 20-Aug-2018 16:18:59 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 20-Aug-2018 16:18:59 Setting up libwebp5:amd64 (0.4.4-1) ... build 20-Aug-2018 16:19:00 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 20-Aug-2018 16:19:00 Setting up p7zip-full (9.20.1~dfsg.1-4.2) ... build 20-Aug-2018 16:19:00 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 20-Aug-2018 16:19:02 Setting up proj-bin (4.9.2-2) ... build 20-Aug-2018 16:19:02 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 20-Aug-2018 16:19:02 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:19:02 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:19:02 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:19:03 Setting up odbcinst (2.3.1-4.1) ... build 20-Aug-2018 16:19:04 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 20-Aug-2018 16:19:04 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 20-Aug-2018 16:19:05 Collecting pip==9.0.3 build 20-Aug-2018 16:19:05 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 20-Aug-2018 16:19:05 Installing collected packages: pip build 20-Aug-2018 16:19:05 Found existing installation: pip 8.1.1 build 20-Aug-2018 16:19:05 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 20-Aug-2018 16:19:06 Successfully installed pip-9.0.3 build 20-Aug-2018 16:19:06 You are using pip version 9.0.3, however version 18.0 is available. build 20-Aug-2018 16:19:06 You should consider upgrading via the 'pip install --upgrade pip' command. build 20-Aug-2018 16:19:06 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 20-Aug-2018 16:19:06 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 20-Aug-2018 16:19:07 Collecting pika==0.10.0 (from -r /home/clowder/requirements.txt (line 2)) build 20-Aug-2018 16:19:07 Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB) build 20-Aug-2018 16:19:07 Collecting requests==2.10.0 (from -r /home/clowder/requirements.txt (line 3)) build 20-Aug-2018 16:19:07 Downloading https://files.pythonhosted.org/packages/99/b4/63d99ba8e189c47d906b43bae18af4396e336f2b1bfec86af31efe2d2cb8/requests-2.10.0-py2.py3-none-any.whl (506kB) build 20-Aug-2018 16:19:07 Collecting wheel==0.24.0 (from -r /home/clowder/requirements.txt (line 4)) build 20-Aug-2018 16:19:07 Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB) build 20-Aug-2018 16:19:07 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 20-Aug-2018 16:19:07 Downloading https://files.pythonhosted.org/packages/fd/ce/aa4a385e3e9fd351737fd2b07edaa56e7a730448465aceda6b35086a0d9b/httplib2-0.11.3.tar.gz (215kB) build 20-Aug-2018 16:19:07 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 20-Aug-2018 16:19:08 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 20-Aug-2018 16:19:08 Installing collected packages: httplib2, gisdata, gsconfig, pika, requests, wheel build 20-Aug-2018 16:19:08 Running setup.py install for httplib2: started build 20-Aug-2018 16:19:08 Running setup.py install for httplib2: finished with status 'done' build 20-Aug-2018 16:19:08 Running setup.py install for gisdata: started build 20-Aug-2018 16:19:09 Running setup.py install for gisdata: finished with status 'done' build 20-Aug-2018 16:19:09 Running setup.py install for gsconfig: started build 20-Aug-2018 16:19:09 Running setup.py install for gsconfig: finished with status 'done' build 20-Aug-2018 16:19:09 Found existing installation: pika 0.11.2 build 20-Aug-2018 16:19:09 Uninstalling pika-0.11.2: build 20-Aug-2018 16:19:10 Successfully uninstalled pika-0.11.2 build 20-Aug-2018 16:19:10 Found existing installation: requests 2.18.4 build 20-Aug-2018 16:19:10 Uninstalling requests-2.18.4: build 20-Aug-2018 16:19:11 Successfully uninstalled requests-2.18.4 build 20-Aug-2018 16:19:12 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.11.3 pika-0.10.0 requests-2.10.0 wheel-0.24.0 build 20-Aug-2018 16:19:12 You are using pip version 9.0.3, however version 18.0 is available. build 20-Aug-2018 16:19:12 You should consider upgrading via the 'pip install --upgrade pip' command. build 20-Aug-2018 16:19:14 Removing intermediate container 8a90defa86f4 build 20-Aug-2018 16:19:14 ---> b2aa3aba1b5f build 20-Aug-2018 16:19:14 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 20-Aug-2018 16:19:15 ---> Running in f79ded6f95d5 build 20-Aug-2018 16:19:15 Removing intermediate container f79ded6f95d5 build 20-Aug-2018 16:19:15 ---> 643c36bedafc build 20-Aug-2018 16:19:15 Step 6/8 : CMD ["extractor"] build 20-Aug-2018 16:19:15 ---> Running in 385ea6731f00 build 20-Aug-2018 16:19:15 Removing intermediate container 385ea6731f00 build 20-Aug-2018 16:19:15 ---> 0cf889881e90 build 20-Aug-2018 16:19:15 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geotiff.preview" MAIN_SCRIPT="ncsa.geo.tiff.py" GEOSERVER_URL="" GEOSERVER_USERNAME="admin" GEOSERVER_PASSWORD="geoserver" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 20-Aug-2018 16:19:15 ---> Running in bb843c5173e9 build 20-Aug-2018 16:19:16 Removing intermediate container bb843c5173e9 build 20-Aug-2018 16:19:16 ---> 9d6a812f1494 build 20-Aug-2018 16:19:16 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json rasterTemplate.xml /home/clowder/ build 20-Aug-2018 16:19:16 ---> 9738ce9eaa1a build 20-Aug-2018 16:19:16 Successfully built 9738ce9eaa1a build 20-Aug-2018 16:19:16 Successfully tagged 31461:latest build 20-Aug-2018 16:19:17 Untagged: 31461:latest build 20-Aug-2018 16:19:17 Sending build context to Docker daemon 162.3kB build 20-Aug-2018 16:19:17 build 20-Aug-2018 16:19:17 Step 1/8 : FROM clowder/pyclowder:2 build 20-Aug-2018 16:19:17 ---> b27d04debca2 build 20-Aug-2018 16:19:17 Step 2/8 : MAINTAINER Yong Wook Kim build 20-Aug-2018 16:19:17 ---> Using cache build 20-Aug-2018 16:19:17 ---> ec56e813cd0a build 20-Aug-2018 16:19:17 Step 3/8 : COPY requirements.txt /home/clowder/ build 20-Aug-2018 16:19:17 ---> 567ee31e2c02 build 20-Aug-2018 16:19:17 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full && pip install --upgrade pip==9.0.3 && pip install --upgrade -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 20-Aug-2018 16:19:18 ---> Running in 4fada2d86852 build 20-Aug-2018 16:19:19 Get:1 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 20-Aug-2018 16:19:19 Get:2 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 20-Aug-2018 16:19:19 Get:3 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [88.1 kB] build 20-Aug-2018 16:19:19 Get:4 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 20-Aug-2018 16:19:19 Get:5 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 20-Aug-2018 16:19:19 Get:6 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [688 kB] build 20-Aug-2018 16:19:20 Get:7 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 20-Aug-2018 16:19:20 Get:8 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 20-Aug-2018 16:19:20 Get:9 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [465 kB] build 20-Aug-2018 16:19:20 Get:10 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3748 B] build 20-Aug-2018 16:19:20 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 20-Aug-2018 16:19:20 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 20-Aug-2018 16:19:20 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 20-Aug-2018 16:19:21 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 20-Aug-2018 16:19:21 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [275 kB] build 20-Aug-2018 16:19:21 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1073 kB] build 20-Aug-2018 16:19:21 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 20-Aug-2018 16:19:21 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [876 kB] build 20-Aug-2018 16:19:21 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 20-Aug-2018 16:19:21 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7343 B] build 20-Aug-2018 16:19:21 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8086 B] build 20-Aug-2018 16:19:22 Fetched 25.5 MB in 3s (7514 kB/s) build 20-Aug-2018 16:19:23 Reading package lists... build 20-Aug-2018 16:19:24 Reading package lists... build 20-Aug-2018 16:19:24 Building dependency tree... build 20-Aug-2018 16:19:24 Reading state information... build 20-Aug-2018 16:19:24 The following additional packages will be installed: build 20-Aug-2018 16:19:24 fontconfig-config fonts-dejavu-core gcc-5-base krb5-locales libaec0 build 20-Aug-2018 16:19:24 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 20-Aug-2018 16:19:24 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 20-Aug-2018 16:19:24 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 20-Aug-2018 16:19:24 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 20-Aug-2018 16:19:24 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 20-Aug-2018 16:19:24 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 20-Aug-2018 16:19:24 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 20-Aug-2018 16:19:24 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 20-Aug-2018 16:19:24 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 20-Aug-2018 16:19:24 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 20-Aug-2018 16:19:24 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 20-Aug-2018 16:19:24 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 20-Aug-2018 16:19:24 libsasl2-modules-db libspatialite7 libstdc++6 libsuperlu4 libsz2 libtasn1-6 build 20-Aug-2018 16:19:24 libtiff5 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 build 20-Aug-2018 16:19:24 mysql-common odbcinst odbcinst1debian2 proj-bin proj-data python-numpy build 20-Aug-2018 16:19:24 sgml-base ucf xml-core build 20-Aug-2018 16:19:24 Suggested packages: build 20-Aug-2018 16:19:24 gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools build 20-Aug-2018 16:19:24 libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc odbc-postgresql build 20-Aug-2018 16:19:24 tdsodbc unixodbc-bin ogdi-bin poppler-data libsasl2-modules-otp build 20-Aug-2018 16:19:24 libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit build 20-Aug-2018 16:19:24 | libsasl2-modules-gssapi-heimdal p7zip-rar gcc gfortran python-dev build 20-Aug-2018 16:19:24 python-nose python-numpy-dbg python-numpy-doc sgml-base-doc debhelper build 20-Aug-2018 16:19:24 The following NEW packages will be installed: build 20-Aug-2018 16:19:24 file fontconfig-config fonts-dejavu-core gdal-bin krb5-locales libaec0 build 20-Aug-2018 16:19:24 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 20-Aug-2018 16:19:24 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 20-Aug-2018 16:19:24 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 20-Aug-2018 16:19:24 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 20-Aug-2018 16:19:24 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 20-Aug-2018 16:19:24 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 20-Aug-2018 16:19:24 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 20-Aug-2018 16:19:24 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 20-Aug-2018 16:19:24 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 20-Aug-2018 16:19:24 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 20-Aug-2018 16:19:24 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 20-Aug-2018 16:19:24 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 20-Aug-2018 16:19:24 libsasl2-modules-db libspatialite7 libsuperlu4 libsz2 libtasn1-6 libtiff5 build 20-Aug-2018 16:19:24 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 mysql-common build 20-Aug-2018 16:19:24 odbcinst odbcinst1debian2 p7zip-full proj-bin proj-data python-gdal build 20-Aug-2018 16:19:24 python-numpy sgml-base ucf xml-core build 20-Aug-2018 16:19:24 The following packages will be upgraded: build 20-Aug-2018 16:19:24 gcc-5-base libstdc++6 build 20-Aug-2018 16:19:24 2 upgraded, 92 newly installed, 0 to remove and 19 not upgraded. build 20-Aug-2018 16:19:24 Need to get 36.2 MB of archives. build 20-Aug-2018 16:19:24 After this operation, 146 MB of additional disk space will be used. build 20-Aug-2018 16:19:24 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 20-Aug-2018 16:19:25 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 20-Aug-2018 16:19:25 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 20-Aug-2018 16:19:25 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 20-Aug-2018 16:19:25 Get:5 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 20-Aug-2018 16:19:25 Get:6 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 20-Aug-2018 16:19:25 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 20-Aug-2018 16:19:25 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 20-Aug-2018 16:19:25 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 20-Aug-2018 16:19:25 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.1 [216 kB] build 20-Aug-2018 16:19:25 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.1 [21.2 kB] build 20-Aug-2018 16:19:25 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 20-Aug-2018 16:19:25 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 20-Aug-2018 16:19:25 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 20-Aug-2018 16:19:25 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 20-Aug-2018 16:19:25 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 20-Aug-2018 16:19:25 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 20-Aug-2018 16:19:25 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 20-Aug-2018 16:19:25 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 20-Aug-2018 16:19:25 Get:20 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 20-Aug-2018 16:19:25 Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 20-Aug-2018 16:19:25 Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 20-Aug-2018 16:19:25 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 20-Aug-2018 16:19:25 Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 20-Aug-2018 16:19:25 Get:25 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libk5crypto3 amd64 1.13.2+dfsg-5ubuntu2 [81.2 kB] build 20-Aug-2018 16:19:25 Get:26 http://archive.ubuntu.com/ubuntu xenial/main amd64 libkeyutils1 amd64 1.5.9-8ubuntu1 [9904 B] build 20-Aug-2018 16:19:25 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-3 amd64 1.13.2+dfsg-5ubuntu2 [273 kB] build 20-Aug-2018 16:19:25 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi-krb5-2 amd64 1.13.2+dfsg-5ubuntu2 [120 kB] build 20-Aug-2018 16:19:25 Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhcrypto4-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [85.0 kB] build 20-Aug-2018 16:19:25 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimbase1-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [29.3 kB] build 20-Aug-2018 16:19:25 Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwind0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [47.8 kB] build 20-Aug-2018 16:19:25 Get:32 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhx509-5-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [107 kB] build 20-Aug-2018 16:19:25 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 20-Aug-2018 16:19:25 Get:34 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 20-Aug-2018 16:19:25 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 20-Aug-2018 16:19:26 Get:36 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 20-Aug-2018 16:19:26 Get:37 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 20-Aug-2018 16:19:26 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu3.3 [161 kB] build 20-Aug-2018 16:19:26 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d-1ubuntu0.1 [54.4 kB] build 20-Aug-2018 16:19:26 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcurl3-gnutls amd64 7.47.0-1ubuntu2.8 [185 kB] build 20-Aug-2018 16:19:26 Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 20-Aug-2018 16:19:26 Get:42 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules amd64 2.1.26.dfsg1-14build1 [47.5 kB] build 20-Aug-2018 16:19:26 Get:43 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 20-Aug-2018 16:19:26 Get:44 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 20-Aug-2018 16:19:26 Get:45 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 20-Aug-2018 16:19:26 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 20-Aug-2018 16:19:26 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB] build 20-Aug-2018 16:19:26 Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB] build 20-Aug-2018 16:19:26 Get:49 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 20-Aug-2018 16:19:26 Get:50 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 20-Aug-2018 16:19:26 Get:51 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarmadillo6 amd64 1:6.500.5+dfsg-1 [75.2 kB] build 20-Aug-2018 16:19:26 Get:52 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 20-Aug-2018 16:19:26 Get:53 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 20-Aug-2018 16:19:26 Get:54 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libepsilon1 amd64 0.9.2-3ubuntu1 [41.0 kB] build 20-Aug-2018 16:19:26 Get:55 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libfreexl1 amd64 1.0.2-1 [33.6 kB] build 20-Aug-2018 16:19:26 Get:56 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-3.5.0 amd64 3.5.0-1ubuntu2 [477 kB] build 20-Aug-2018 16:19:26 Get:57 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-c1v5 amd64 3.5.0-1ubuntu2 [52.4 kB] build 20-Aug-2018 16:19:26 Get:58 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgif7 amd64 5.1.4-0.3~16.04 [30.5 kB] build 20-Aug-2018 16:19:26 Get:59 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] build 20-Aug-2018 16:19:26 Get:60 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf4-0-alt amd64 4.2.10-3.2 [264 kB] build 20-Aug-2018 16:19:26 Get:61 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libaec0 amd64 0.3.2-1 [18.0 kB] build 20-Aug-2018 16:19:26 Get:62 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsz2 amd64 0.3.2-1 [5048 B] build 20-Aug-2018 16:19:26 Get:63 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf5-10 amd64 1.8.16+docs-4ubuntu1 [995 kB] build 20-Aug-2018 16:19:26 Get:64 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjasper1 amd64 1.900.1-debian1-2.4ubuntu1.2 [131 kB] build 20-Aug-2018 16:19:26 Get:65 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libminizip1 amd64 1.1-8 [20.3 kB] build 20-Aug-2018 16:19:26 Get:66 http://archive.ubuntu.com/ubuntu xenial/universe amd64 liburiparser1 amd64 0.8.4-1 [38.0 kB] build 20-Aug-2018 16:19:26 Get:67 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlbase1 amd64 1.3.0-1 [43.9 kB] build 20-Aug-2018 16:19:26 Get:68 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmldom1 amd64 1.3.0-1 [175 kB] build 20-Aug-2018 16:19:26 Get:69 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlengine1 amd64 1.3.0-1 [77.1 kB] build 20-Aug-2018 16:19:26 Get:70 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 mysql-common all 5.7.23-0ubuntu0.16.04.1 [15.4 kB] build 20-Aug-2018 16:19:26 Get:71 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmysqlclient20 amd64 5.7.23-0ubuntu0.16.04.1 [812 kB] build 20-Aug-2018 16:19:26 Get:72 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libnetcdf11 amd64 1:4.4.0-2 [286 kB] build 20-Aug-2018 16:19:26 Get:73 http://archive.ubuntu.com/ubuntu xenial/main amd64 libltdl7 amd64 2.4.6-0.1 [38.3 kB] build 20-Aug-2018 16:19:26 Get:74 http://archive.ubuntu.com/ubuntu xenial/main amd64 libodbc1 amd64 2.3.1-4.1 [180 kB] build 20-Aug-2018 16:19:26 Get:75 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-data all 4.9.2-2 [4004 kB] build 20-Aug-2018 16:19:27 Get:76 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libproj9 amd64 4.9.2-2 [143 kB] build 20-Aug-2018 16:19:27 Get:77 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libogdi3.2 amd64 3.2.0~beta2-7.1build1 [212 kB] build 20-Aug-2018 16:19:27 Get:78 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 libopenjp2-7 amd64 2.1.0-2.1ubuntu0.1 [103 kB] build 20-Aug-2018 16:19:27 Get:79 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfreetype6 amd64 2.6.1-0.1ubuntu2.3 [316 kB] build 20-Aug-2018 16:19:27 Get:80 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfontconfig1 amd64 2.11.94-0ubuntu1.1 [131 kB] build 20-Aug-2018 16:19:27 Get:81 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtiff5 amd64 4.0.6-1ubuntu0.4 [148 kB] build 20-Aug-2018 16:19:27 Get:82 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpoppler58 amd64 0.41.0-0ubuntu1.7 [758 kB] build 20-Aug-2018 16:19:27 Get:83 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpq5 amd64 9.5.14-0ubuntu0.16.04 [78.8 kB] build 20-Aug-2018 16:19:27 Get:84 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libspatialite7 amd64 4.3.0a-5 [1222 kB] build 20-Aug-2018 16:19:27 Get:85 http://archive.ubuntu.com/ubuntu xenial/main amd64 libwebp5 amd64 0.4.4-1 [165 kB] build 20-Aug-2018 16:19:27 Get:86 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libxerces-c3.1 amd64 3.1.3+debian-1 [842 kB] build 20-Aug-2018 16:19:27 Get:87 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst amd64 2.3.1-4.1 [13.1 kB] build 20-Aug-2018 16:19:27 Get:88 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst1debian2 amd64 2.3.1-4.1 [41.1 kB] build 20-Aug-2018 16:19:27 Get:89 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgdal1i amd64 1.11.3+dfsg-3build2 [4013 kB] build 20-Aug-2018 16:19:27 Get:90 http://archive.ubuntu.com/ubuntu xenial/universe amd64 gdal-bin amd64 1.11.3+dfsg-3build2 [226 kB] build 20-Aug-2018 16:19:27 Get:91 http://archive.ubuntu.com/ubuntu xenial/universe amd64 p7zip-full amd64 9.20.1~dfsg.1-4.2 [919 kB] build 20-Aug-2018 16:19:27 Get:92 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-numpy amd64 1:1.11.0-1ubuntu1 [1763 kB] build 20-Aug-2018 16:19:27 Get:93 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-gdal amd64 1.11.3+dfsg-3build2 [423 kB] build 20-Aug-2018 16:19:27 Get:94 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-bin amd64 4.9.2-2 [31.3 kB] build 20-Aug-2018 16:19:27 debconf: delaying package configuration, since apt-utils is not installed build 20-Aug-2018 16:19:27 Fetched 36.2 MB in 2s (13.5 MB/s) build 20-Aug-2018 16:19:27 Selecting previously unselected package sgml-base. build 20-Aug-2018 16:19:27 (Reading database ... build 20-Aug-2018 16:19:27 (Reading database ... 5% build 20-Aug-2018 16:19:27 (Reading database ... 10% build 20-Aug-2018 16:19:27 (Reading database ... 15% build 20-Aug-2018 16:19:27 (Reading database ... 20% build 20-Aug-2018 16:19:27 (Reading database ... 25% build 20-Aug-2018 16:19:27 (Reading database ... 30% build 20-Aug-2018 16:19:27 (Reading database ... 35% build 20-Aug-2018 16:19:27 (Reading database ... 40% build 20-Aug-2018 16:19:27 (Reading database ... 45% build 20-Aug-2018 16:19:27 (Reading database ... 50% build 20-Aug-2018 16:19:27 (Reading database ... 55% build 20-Aug-2018 16:19:27 (Reading database ... 60% build 20-Aug-2018 16:19:27 (Reading database ... 65% build 20-Aug-2018 16:19:27 (Reading database ... 70% build 20-Aug-2018 16:19:27 (Reading database ... 75% build 20-Aug-2018 16:19:27 (Reading database ... 80% build 20-Aug-2018 16:19:27 (Reading database ... 85% build 20-Aug-2018 16:19:27 (Reading database ... 90% build 20-Aug-2018 16:19:27 (Reading database ... 95% build 20-Aug-2018 16:19:27 (Reading database ... 100% build 20-Aug-2018 16:19:27 (Reading database ... 6036 files and directories currently installed.) build 20-Aug-2018 16:19:27 Preparing to unpack .../sgml-base_1.26+nmu4ubuntu1_all.deb ... build 20-Aug-2018 16:19:28 Unpacking sgml-base (1.26+nmu4ubuntu1) ... build 20-Aug-2018 16:19:28 Selecting previously unselected package libjpeg-turbo8:amd64. build 20-Aug-2018 16:19:28 Preparing to unpack .../libjpeg-turbo8_1.4.2-0ubuntu3.1_amd64.deb ... build 20-Aug-2018 16:19:29 Unpacking libjpeg-turbo8:amd64 (1.4.2-0ubuntu3.1) ... build 20-Aug-2018 16:19:29 Selecting previously unselected package liblcms2-2:amd64. build 20-Aug-2018 16:19:29 Preparing to unpack .../liblcms2-2_2.6-3ubuntu2_amd64.deb ... build 20-Aug-2018 16:19:29 Unpacking liblcms2-2:amd64 (2.6-3ubuntu2) ... build 20-Aug-2018 16:19:29 Selecting previously unselected package libblas-common. build 20-Aug-2018 16:19:29 Preparing to unpack .../libblas-common_3.6.0-2ubuntu2_amd64.deb ... build 20-Aug-2018 16:19:29 Unpacking libblas-common (3.6.0-2ubuntu2) ... build 20-Aug-2018 16:19:30 Selecting previously unselected package libblas3. build 20-Aug-2018 16:19:30 Preparing to unpack .../libblas3_3.6.0-2ubuntu2_amd64.deb ... build 20-Aug-2018 16:19:30 Unpacking libblas3 (3.6.0-2ubuntu2) ... build 20-Aug-2018 16:19:31 Selecting previously unselected package libsuperlu4:amd64. build 20-Aug-2018 16:19:31 Preparing to unpack .../libsuperlu4_4.3+dfsg-3_amd64.deb ... build 20-Aug-2018 16:19:31 Unpacking libsuperlu4:amd64 (4.3+dfsg-3) ... build 20-Aug-2018 16:19:31 Selecting previously unselected package libjbig0:amd64. build 20-Aug-2018 16:19:31 Preparing to unpack .../libjbig0_2.1-3.1_amd64.deb ... build 20-Aug-2018 16:19:31 Unpacking libjbig0:amd64 (2.1-3.1) ... build 20-Aug-2018 16:19:31 Preparing to unpack .../gcc-5-base_5.4.0-6ubuntu1~16.04.10_amd64.deb ... build 20-Aug-2018 16:19:31 Unpacking gcc-5-base:amd64 (5.4.0-6ubuntu1~16.04.10) over (5.4.0-6ubuntu1~16.04.9) ... build 20-Aug-2018 16:19:32 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 20-Aug-2018 16:19:32 Setting up gcc-5-base:amd64 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mysql-common. build 20-Aug-2018 16:20:02 Preparing to unpack .../mysql-common_5.7.23-0ubuntu0.16.04.1_all.deb ... build 20-Aug-2018 16:20:02 Unpacking mysql-common (5.7.23-0ubuntu0.16.04.1) ... build 20-Aug-2018 16:20:02 Selecting previously unselected package libmysqlclient20:amd64. build 20-Aug-2018 16:20:02 Preparing to unpack .../libmysqlclient20_5.7.23-0ubuntu0.16.04.1_amd64.deb ... build 20-Aug-2018 16:20:03 Unpacking libmysqlclient20:amd64 (5.7.23-0ubuntu0.16.04.1) ... build 20-Aug-2018 16:20:03 Selecting previously unselected package libnetcdf11. build 20-Aug-2018 16:20:03 Preparing to unpack .../libnetcdf11_1%3a4.4.0-2_amd64.deb ... build 20-Aug-2018 16:20:03 Unpacking libnetcdf11 (1:4.4.0-2) ... build 20-Aug-2018 16:20:03 Selecting previously unselected package libltdl7:amd64. build 20-Aug-2018 16:20:03 Preparing to unpack .../libltdl7_2.4.6-0.1_amd64.deb ... build 20-Aug-2018 16:20:03 Unpacking libltdl7:amd64 (2.4.6-0.1) ... build 20-Aug-2018 16:20:04 Selecting previously 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gdal-bin. build 20-Aug-2018 16:20:12 Preparing to unpack .../gdal-bin_1.11.3+dfsg-3build2_amd64.deb ... build 20-Aug-2018 16:20:12 Unpacking gdal-bin (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:20:13 Selecting previously unselected package p7zip-full. build 20-Aug-2018 16:20:13 Preparing to unpack .../p7zip-full_9.20.1~dfsg.1-4.2_amd64.deb ... build 20-Aug-2018 16:20:13 Unpacking p7zip-full (9.20.1~dfsg.1-4.2) ... build 20-Aug-2018 16:20:13 Selecting previously unselected package python-numpy. build 20-Aug-2018 16:20:13 Preparing to unpack .../python-numpy_1%3a1.11.0-1ubuntu1_amd64.deb ... build 20-Aug-2018 16:20:13 Unpacking python-numpy (1:1.11.0-1ubuntu1) ... build 20-Aug-2018 16:20:14 Selecting previously unselected package python-gdal. build 20-Aug-2018 16:20:14 Preparing to unpack .../python-gdal_1.11.3+dfsg-3build2_amd64.deb ... build 20-Aug-2018 16:20:14 Unpacking python-gdal (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:20:14 Selecting previously unselected package proj-bin. build 20-Aug-2018 16:20:14 Preparing to unpack .../proj-bin_4.9.2-2_amd64.deb ... build 20-Aug-2018 16:20:14 Unpacking proj-bin (4.9.2-2) ... build 20-Aug-2018 16:20:14 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 20-Aug-2018 16:20:15 Setting up sgml-base (1.26+nmu4ubuntu1) ... build 20-Aug-2018 16:20:15 Setting up libjpeg-turbo8:amd64 (1.4.2-0ubuntu3.1) ... build 20-Aug-2018 16:20:15 Setting up liblcms2-2:amd64 (2.6-3ubuntu2) ... build 20-Aug-2018 16:20:15 Setting up libblas-common (3.6.0-2ubuntu2) ... build 20-Aug-2018 16:20:16 Setting up libblas3 (3.6.0-2ubuntu2) ... build 20-Aug-2018 16:20:16 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 20-Aug-2018 16:20:16 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 20-Aug-2018 16:20:16 Setting up libjbig0:amd64 (2.1-3.1) ... build 20-Aug-2018 16:20:17 Setting up libmagic1:amd64 (1:5.25-2ubuntu1.1) ... build 20-Aug-2018 16:20:17 Setting up file (1:5.25-2ubuntu1.1) ... build 20-Aug-2018 16:20:17 Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ... build 20-Aug-2018 16:20:17 Setting up libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ... build 20-Aug-2018 16:20:17 Setting up libhogweed4:amd64 (3.2-1ubuntu0.16.04.1) ... build 20-Aug-2018 16:20:17 Setting up libidn11:amd64 (1.32-3ubuntu1.2) ... build 20-Aug-2018 16:20:17 Setting up libp11-kit0:amd64 (0.23.2-5~ubuntu16.04.1) ... build 20-Aug-2018 16:20:17 Setting up libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 20-Aug-2018 16:20:18 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 20-Aug-2018 16:20:18 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ... build 20-Aug-2018 16:20:18 Setting up ucf (3.0036) ... build 20-Aug-2018 16:20:18 debconf: unable to initialize frontend: Dialog build 20-Aug-2018 16:20:18 debconf: (TERM is not set, so the dialog frontend is not usable.) build 20-Aug-2018 16:20:18 debconf: falling back to frontend: Readline build 20-Aug-2018 16:20:18 debconf: unable to initialize frontend: Readline build 20-Aug-2018 16:20:18 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) build 20-Aug-2018 16:20:18 debconf: falling back to frontend: Teletype build 20-Aug-2018 16:20:18 Setting up krb5-locales (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:20:18 Setting up libroken18-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:20:19 Setting up libasn1-8-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:20:19 Setting up libkrb5support0:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:20:19 Setting up libk5crypto3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:20:19 Setting up libkeyutils1:amd64 (1.5.9-8ubuntu1) ... build 20-Aug-2018 16:20:19 Setting up libkrb5-3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:20:19 Setting up libgssapi-krb5-2:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:20:19 Setting up libhcrypto4-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:20:19 Setting up libheimbase1-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:20:20 Setting up libwind0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:20:20 Setting up libhx509-5-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:20:20 Setting up libkrb5-26-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:20:20 Setting up libheimntlm0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:20:20 Setting up libgssapi3-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:20:20 Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-14build1) ... build 20-Aug-2018 16:20:20 Setting up libsasl2-2:amd64 (2.1.26.dfsg1-14build1) ... build 20-Aug-2018 16:20:20 Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu3.3) ... build 20-Aug-2018 16:20:21 Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d-1ubuntu0.1) ... build 20-Aug-2018 16:20:21 Setting up libcurl3-gnutls:amd64 (7.47.0-1ubuntu2.8) ... build 20-Aug-2018 16:20:21 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 20-Aug-2018 16:20:22 Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-14build1) ... build 20-Aug-2018 16:20:22 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ... build 20-Aug-2018 16:20:22 Setting up xml-core (0.13+nmu2) ... build 20-Aug-2018 16:20:22 Setting up fonts-dejavu-core (2.35-1) ... build 20-Aug-2018 16:20:23 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 20-Aug-2018 16:20:25 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 20-Aug-2018 16:20:25 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 20-Aug-2018 16:20:25 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 20-Aug-2018 16:20:25 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 20-Aug-2018 16:20:25 Setting up libarpack2 (3.3.0-1build2) ... build 20-Aug-2018 16:20:25 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 20-Aug-2018 16:20:25 Setting up libdap17v5:amd64 (3.15.1-7) ... build 20-Aug-2018 16:20:25 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 20-Aug-2018 16:20:26 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 20-Aug-2018 16:20:26 Setting up libfreexl1:amd64 (1.0.2-1) ... build 20-Aug-2018 16:20:26 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 20-Aug-2018 16:20:26 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 20-Aug-2018 16:20:26 Setting up libgif7:amd64 (5.1.4-0.3~16.04) ... build 20-Aug-2018 16:20:26 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 20-Aug-2018 16:20:26 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 20-Aug-2018 16:20:26 Setting up libaec0:amd64 (0.3.2-1) ... build 20-Aug-2018 16:20:27 Setting up libsz2:amd64 (0.3.2-1) ... build 20-Aug-2018 16:20:27 Setting up libhdf5-10:amd64 (1.8.16+docs-4ubuntu1) ... build 20-Aug-2018 16:20:27 Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.2) ... build 20-Aug-2018 16:20:27 Setting up libminizip1:amd64 (1.1-8) ... build 20-Aug-2018 16:20:28 Setting up liburiparser1:amd64 (0.8.4-1) ... build 20-Aug-2018 16:20:28 Setting up libkmlbase1:amd64 (1.3.0-1) ... build 20-Aug-2018 16:20:28 Setting up libkmldom1:amd64 (1.3.0-1) ... build 20-Aug-2018 16:20:28 Setting up libkmlengine1:amd64 (1.3.0-1) ... build 20-Aug-2018 16:20:28 Setting up mysql-common (5.7.23-0ubuntu0.16.04.1) ... build 20-Aug-2018 16:20:28 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 20-Aug-2018 16:20:28 Setting up libmysqlclient20:amd64 (5.7.23-0ubuntu0.16.04.1) ... build 20-Aug-2018 16:20:28 Setting up libnetcdf11 (1:4.4.0-2) ... build 20-Aug-2018 16:20:29 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 20-Aug-2018 16:20:29 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 20-Aug-2018 16:20:29 Setting up proj-data (4.9.2-2) ... build 20-Aug-2018 16:20:29 Setting up libproj9 (4.9.2-2) ... build 20-Aug-2018 16:20:29 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 20-Aug-2018 16:20:29 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 20-Aug-2018 16:20:29 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 20-Aug-2018 16:20:29 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 20-Aug-2018 16:20:30 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 20-Aug-2018 16:20:30 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 20-Aug-2018 16:20:30 Setting up libpq5:amd64 (9.5.14-0ubuntu0.16.04) ... build 20-Aug-2018 16:20:30 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 20-Aug-2018 16:20:30 Setting up libwebp5:amd64 (0.4.4-1) ... build 20-Aug-2018 16:20:30 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 20-Aug-2018 16:20:30 Setting up p7zip-full (9.20.1~dfsg.1-4.2) ... build 20-Aug-2018 16:20:30 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 20-Aug-2018 16:20:32 Setting up proj-bin (4.9.2-2) ... build 20-Aug-2018 16:20:32 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 20-Aug-2018 16:20:33 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:20:33 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:20:33 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:20:34 Setting up odbcinst (2.3.1-4.1) ... build 20-Aug-2018 16:20:34 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 20-Aug-2018 16:20:34 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 20-Aug-2018 16:20:35 Collecting pip==9.0.3 build 20-Aug-2018 16:20:36 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 20-Aug-2018 16:20:36 Installing collected packages: pip build 20-Aug-2018 16:20:36 Found existing installation: pip 8.1.1 build 20-Aug-2018 16:20:36 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 20-Aug-2018 16:20:37 Successfully installed pip-9.0.3 build 20-Aug-2018 16:20:37 You are using pip version 9.0.3, however version 18.0 is available. build 20-Aug-2018 16:20:37 You should consider upgrading via the 'pip install --upgrade pip' command. build 20-Aug-2018 16:20:37 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 20-Aug-2018 16:20:37 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 20-Aug-2018 16:20:37 Collecting pika==0.10.0 (from -r /home/clowder/requirements.txt (line 2)) build 20-Aug-2018 16:20:38 Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB) build 20-Aug-2018 16:20:38 Collecting requests==2.10.0 (from -r /home/clowder/requirements.txt (line 3)) build 20-Aug-2018 16:20:38 Downloading https://files.pythonhosted.org/packages/99/b4/63d99ba8e189c47d906b43bae18af4396e336f2b1bfec86af31efe2d2cb8/requests-2.10.0-py2.py3-none-any.whl (506kB) build 20-Aug-2018 16:20:38 Collecting wheel==0.24.0 (from -r /home/clowder/requirements.txt (line 4)) build 20-Aug-2018 16:20:38 Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB) build 20-Aug-2018 16:20:38 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 20-Aug-2018 16:20:38 Downloading https://files.pythonhosted.org/packages/fd/ce/aa4a385e3e9fd351737fd2b07edaa56e7a730448465aceda6b35086a0d9b/httplib2-0.11.3.tar.gz (215kB) build 20-Aug-2018 16:20:38 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 20-Aug-2018 16:20:38 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 20-Aug-2018 16:20:39 Installing collected packages: httplib2, gisdata, gsconfig, pika, requests, wheel build 20-Aug-2018 16:20:39 Running setup.py install for httplib2: started build 20-Aug-2018 16:20:39 Running setup.py install for httplib2: finished with status 'done' build 20-Aug-2018 16:20:39 Running setup.py install for gisdata: started build 20-Aug-2018 16:20:39 Running setup.py install for gisdata: finished with status 'done' build 20-Aug-2018 16:20:39 Running setup.py install for gsconfig: started build 20-Aug-2018 16:20:40 Running setup.py install for gsconfig: finished with status 'done' build 20-Aug-2018 16:20:40 Found existing installation: pika 0.11.2 build 20-Aug-2018 16:20:40 Uninstalling pika-0.11.2: build 20-Aug-2018 16:20:41 Successfully uninstalled pika-0.11.2 build 20-Aug-2018 16:20:41 Found existing installation: requests 2.18.4 build 20-Aug-2018 16:20:41 Uninstalling requests-2.18.4: build 20-Aug-2018 16:20:42 Successfully uninstalled requests-2.18.4 build 20-Aug-2018 16:20:43 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.11.3 pika-0.10.0 requests-2.10.0 wheel-0.24.0 build 20-Aug-2018 16:20:43 You are using pip version 9.0.3, however version 18.0 is available. build 20-Aug-2018 16:20:43 You should consider upgrading via the 'pip install --upgrade pip' command. build 20-Aug-2018 16:20:46 Removing intermediate container 4fada2d86852 build 20-Aug-2018 16:20:46 ---> f5a7bc15f07c build 20-Aug-2018 16:20:46 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 20-Aug-2018 16:20:46 ---> Running in 662a177d46b2 build 20-Aug-2018 16:20:46 Removing intermediate container 662a177d46b2 build 20-Aug-2018 16:20:46 ---> 7c1ad665430f build 20-Aug-2018 16:20:46 Step 6/8 : CMD ["extractor"] build 20-Aug-2018 16:20:46 ---> Running in 1b1e4604dc61 build 20-Aug-2018 16:20:46 Removing intermediate container 1b1e4604dc61 build 20-Aug-2018 16:20:46 ---> a84861a00a5b build 20-Aug-2018 16:20:46 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geoshp.preview" MAIN_SCRIPT="ncsa.geo.shp.py" GEOSERVER_URL="" GEOSERVER_USERNAME="admin" GEOSERVER_PASSWORD="geoserver" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 20-Aug-2018 16:20:47 ---> Running in 0aa829eb22a1 build 20-Aug-2018 16:20:47 Removing intermediate container 0aa829eb22a1 build 20-Aug-2018 16:20:47 ---> 963c17db82cb build 20-Aug-2018 16:20:47 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json rasterTemplate.xml /home/clowder/ build 20-Aug-2018 16:20:48 ---> b2a8c2713088 build 20-Aug-2018 16:20:48 Successfully built b2a8c2713088 build 20-Aug-2018 16:20:48 Successfully tagged 31461:latest build 20-Aug-2018 16:20:48 Untagged: 31461:latest build 20-Aug-2018 16:20:48 Sending build context to Docker daemon 1.472MB build 20-Aug-2018 16:20:48 build 20-Aug-2018 16:20:48 Step 1/8 : FROM clowder/pyclowder:2 build 20-Aug-2018 16:20:48 ---> b27d04debca2 build 20-Aug-2018 16:20:48 Step 2/8 : MAINTAINER Yong Wook Kim build 20-Aug-2018 16:20:48 ---> Using cache build 20-Aug-2018 16:20:48 ---> ec56e813cd0a build 20-Aug-2018 16:20:48 Step 3/8 : COPY requirements.txt /home/clowder/ build 20-Aug-2018 16:20:49 ---> 2fa2fc746bc0 build 20-Aug-2018 16:20:49 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full python-pyproj git && pip install --upgrade pip==9.0.3 && pip install -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 20-Aug-2018 16:20:49 ---> Running in 3890470a49a2 build 20-Aug-2018 16:20:49 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 20-Aug-2018 16:20:49 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 20-Aug-2018 16:20:50 Get:3 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [88.1 kB] build 20-Aug-2018 16:20:50 Get:4 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [688 kB] build 20-Aug-2018 16:20:50 Get:5 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 20-Aug-2018 16:20:50 Get:6 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [465 kB] build 20-Aug-2018 16:20:50 Get:7 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3748 B] build 20-Aug-2018 16:20:50 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 20-Aug-2018 16:20:50 Get:9 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 20-Aug-2018 16:20:50 Get:10 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 20-Aug-2018 16:20:51 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 20-Aug-2018 16:20:51 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 20-Aug-2018 16:20:51 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 20-Aug-2018 16:20:51 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 20-Aug-2018 16:20:51 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [275 kB] build 20-Aug-2018 16:20:51 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1073 kB] build 20-Aug-2018 16:20:51 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 20-Aug-2018 16:20:51 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [876 kB] build 20-Aug-2018 16:20:51 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 20-Aug-2018 16:20:51 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7343 B] build 20-Aug-2018 16:20:51 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8086 B] build 20-Aug-2018 16:20:53 Fetched 25.5 MB in 3s (7518 kB/s) build 20-Aug-2018 16:20:54 Reading package lists... build 20-Aug-2018 16:20:54 Reading package lists... build 20-Aug-2018 16:20:55 Building dependency tree... build 20-Aug-2018 16:20:55 Reading state information... build 20-Aug-2018 16:20:55 The following additional packages will be installed: build 20-Aug-2018 16:20:55 fontconfig-config fonts-dejavu-core gcc-5-base git-man ifupdown iproute2 build 20-Aug-2018 16:20:55 isc-dhcp-client isc-dhcp-common krb5-locales less libaec0 libarmadillo6 build 20-Aug-2018 16:20:55 libarpack2 libasn1-8-heimdal libatm1 libblas-common libblas3 libbsd0 build 20-Aug-2018 16:20:55 libcurl3-gnutls libdap17v5 libdapclient6v5 libdns-export162 libedit2 build 20-Aug-2018 16:20:55 libepsilon1 liberror-perl libfontconfig1 libfreetype6 libfreexl1 libgdal1i build 20-Aug-2018 16:20:55 libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 libgif7 libgmp10 build 20-Aug-2018 16:20:55 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 20-Aug-2018 16:20:55 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 20-Aug-2018 16:20:55 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libjasper1 build 20-Aug-2018 16:20:55 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 libkmlbase1 build 20-Aug-2018 16:20:55 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 build 20-Aug-2018 16:20:55 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 libminizip1 libmnl0 build 20-Aug-2018 16:20:55 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 20-Aug-2018 16:20:55 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpopt0 libpq5 libproj9 build 20-Aug-2018 16:20:55 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 20-Aug-2018 16:20:55 libsasl2-modules-db libspatialite7 libstdc++6 libsuperlu4 libsz2 libtasn1-6 build 20-Aug-2018 16:20:55 libtiff5 liburiparser1 libwebp5 libwind0-heimdal libx11-6 libx11-data build 20-Aug-2018 16:20:55 libxau6 libxcb1 libxdmcp6 libxerces-c3.1 libxext6 libxml2 libxmuu1 build 20-Aug-2018 16:20:55 libxtables11 mysql-common netbase odbcinst odbcinst1debian2 openssh-client build 20-Aug-2018 16:20:55 patch perl perl-base perl-modules-5.22 proj-bin proj-data python-numpy build 20-Aug-2018 16:20:55 rename rsync sgml-base ucf xauth xml-core build 20-Aug-2018 16:20:55 Suggested packages: build 20-Aug-2018 16:20:55 gettext-base git-daemon-run | git-daemon-sysvinit git-doc git-el git-email build 20-Aug-2018 16:20:55 git-gui gitk gitweb git-arch git-cvs git-mediawiki git-svn ppp rdnssd build 20-Aug-2018 16:20:55 iproute2-doc resolvconf avahi-autoipd isc-dhcp-client-ddns apparmor build 20-Aug-2018 16:20:55 gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools build 20-Aug-2018 16:20:55 libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc odbc-postgresql build 20-Aug-2018 16:20:55 tdsodbc unixodbc-bin ogdi-bin poppler-data libsasl2-modules-otp build 20-Aug-2018 16:20:55 libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit build 20-Aug-2018 16:20:55 | libsasl2-modules-gssapi-heimdal ssh-askpass libpam-ssh keychain build 20-Aug-2018 16:20:55 monkeysphere p7zip-rar ed diffutils-doc perl-doc libterm-readline-gnu-perl build 20-Aug-2018 16:20:55 | libterm-readline-perl-perl make gcc gfortran python-dev python-nose build 20-Aug-2018 16:20:55 python-numpy-dbg python-numpy-doc openssh-server sgml-base-doc debhelper build 20-Aug-2018 16:20:55 The following NEW packages will be installed: build 20-Aug-2018 16:20:55 file fontconfig-config fonts-dejavu-core gdal-bin git git-man ifupdown build 20-Aug-2018 16:20:55 iproute2 isc-dhcp-client isc-dhcp-common krb5-locales less libaec0 build 20-Aug-2018 16:20:55 libarmadillo6 libarpack2 libasn1-8-heimdal libatm1 libblas-common libblas3 build 20-Aug-2018 16:20:55 libbsd0 libcurl3-gnutls libdap17v5 libdapclient6v5 libdns-export162 libedit2 build 20-Aug-2018 16:20:55 libepsilon1 liberror-perl libfontconfig1 libfreetype6 libfreexl1 libgdal1i build 20-Aug-2018 16:20:55 libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 libgif7 libgmp10 build 20-Aug-2018 16:20:55 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 20-Aug-2018 16:20:55 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 20-Aug-2018 16:20:55 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libjasper1 build 20-Aug-2018 16:20:55 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 libkmlbase1 build 20-Aug-2018 16:20:55 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 build 20-Aug-2018 16:20:55 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 libminizip1 libmnl0 build 20-Aug-2018 16:20:55 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 20-Aug-2018 16:20:55 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpopt0 libpq5 libproj9 build 20-Aug-2018 16:20:55 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 20-Aug-2018 16:20:55 libsasl2-modules-db libspatialite7 libsuperlu4 libsz2 libtasn1-6 libtiff5 build 20-Aug-2018 16:20:55 liburiparser1 libwebp5 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb1 build 20-Aug-2018 16:20:55 libxdmcp6 libxerces-c3.1 libxext6 libxml2 libxmuu1 libxtables11 mysql-common build 20-Aug-2018 16:20:55 netbase odbcinst odbcinst1debian2 openssh-client p7zip-full patch perl build 20-Aug-2018 16:20:55 perl-modules-5.22 proj-bin proj-data python-gdal python-numpy python-pyproj build 20-Aug-2018 16:20:55 rename rsync sgml-base ucf xauth xml-core build 20-Aug-2018 16:20:55 The following packages will be upgraded: build 20-Aug-2018 16:20:55 gcc-5-base libstdc++6 perl-base build 20-Aug-2018 16:20:55 3 upgraded, 126 newly installed, 0 to remove and 18 not upgraded. build 20-Aug-2018 16:20:55 Need to get 51.6 MB of archives. build 20-Aug-2018 16:20:55 After this operation, 225 MB of additional disk space will be used. build 20-Aug-2018 16:20:55 Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-base amd64 5.22.1-9ubuntu0.5 [1284 kB] build 20-Aug-2018 16:20:56 Get:2 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatm1 amd64 1:2.5.1-1.5 [24.2 kB] build 20-Aug-2018 16:20:56 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmnl0 amd64 1.0.3-5 [12.0 kB] build 20-Aug-2018 16:20:56 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpopt0 amd64 1.16-10 [26.0 kB] build 20-Aug-2018 16:20:56 Get:5 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgdbm3 amd64 1.8.3-13.1 [16.9 kB] build 20-Aug-2018 16:20:56 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxau6 amd64 1:1.0.8-1 [8376 B] build 20-Aug-2018 16:20:56 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxdmcp6 amd64 1:1.1.2-1.1 [11.0 kB] build 20-Aug-2018 16:20:56 Get:8 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb1 amd64 1.11.1-1ubuntu1 [40.0 kB] build 20-Aug-2018 16:20:56 Get:9 http://archive.ubuntu.com/ubuntu xenial/main amd64 libx11-data all 2:1.6.3-1ubuntu2 [113 kB] build 20-Aug-2018 16:20:56 Get:10 http://archive.ubuntu.com/ubuntu xenial/main amd64 libx11-6 amd64 2:1.6.3-1ubuntu2 [571 kB] build 20-Aug-2018 16:20:56 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxext6 amd64 2:1.3.3-1 [29.4 kB] build 20-Aug-2018 16:20:56 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 20-Aug-2018 16:20:56 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 20-Aug-2018 16:20:56 Get:14 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 20-Aug-2018 16:20:56 Get:15 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 20-Aug-2018 16:20:56 Get:16 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 20-Aug-2018 16:20:56 Get:17 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 20-Aug-2018 16:20:56 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-modules-5.22 all 5.22.1-9ubuntu0.5 [2645 kB] build 20-Aug-2018 16:20:56 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libperl5.22 amd64 5.22.1-9ubuntu0.5 [3396 kB] build 20-Aug-2018 16:20:57 Get:20 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl amd64 5.22.1-9ubuntu0.5 [238 kB] build 20-Aug-2018 16:20:57 Get:21 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 20-Aug-2018 16:20:57 Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 20-Aug-2018 16:20:57 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 20-Aug-2018 16:20:57 Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.1 [216 kB] build 20-Aug-2018 16:20:57 Get:25 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.1 [21.2 kB] build 20-Aug-2018 16:20:57 Get:26 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 iproute2 amd64 4.3.0-1ubuntu3.16.04.3 [522 kB] build 20-Aug-2018 16:20:57 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ifupdown amd64 0.8.10ubuntu1.4 [54.9 kB] build 20-Aug-2018 16:20:57 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libisc-export160 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [153 kB] build 20-Aug-2018 16:20:57 Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdns-export162 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [666 kB] build 20-Aug-2018 16:20:57 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-client amd64 4.3.3-5ubuntu12.10 [224 kB] build 20-Aug-2018 16:20:57 Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-common amd64 4.3.3-5ubuntu12.10 [105 kB] build 20-Aug-2018 16:20:57 Get:32 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 less amd64 481-2.1ubuntu0.2 [110 kB] build 20-Aug-2018 16:20:57 Get:33 http://archive.ubuntu.com/ubuntu xenial/main amd64 libbsd0 amd64 0.8.2-1 [41.7 kB] build 20-Aug-2018 16:20:57 Get:34 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 20-Aug-2018 16:20:57 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 20-Aug-2018 16:20:57 Get:36 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 20-Aug-2018 16:20:57 Get:37 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 20-Aug-2018 16:20:57 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 20-Aug-2018 16:20:57 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 20-Aug-2018 16:20:57 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 20-Aug-2018 16:20:57 Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 20-Aug-2018 16:20:57 Get:42 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxtables11 amd64 1.6.0-2ubuntu3 [27.2 kB] build 20-Aug-2018 16:20:57 Get:43 http://archive.ubuntu.com/ubuntu xenial/main amd64 netbase all 5.3 [12.9 kB] build 20-Aug-2018 16:20:57 Get:44 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 20-Aug-2018 16:20:57 Get:45 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 20-Aug-2018 16:20:57 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 20-Aug-2018 16:20:57 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 20-Aug-2018 16:20:57 Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 20-Aug-2018 16:20:57 Get:49 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libk5crypto3 amd64 1.13.2+dfsg-5ubuntu2 [81.2 kB] build 20-Aug-2018 16:20:57 Get:50 http://archive.ubuntu.com/ubuntu xenial/main amd64 libkeyutils1 amd64 1.5.9-8ubuntu1 [9904 B] build 20-Aug-2018 16:20:57 Get:51 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-3 amd64 1.13.2+dfsg-5ubuntu2 [273 kB] build 20-Aug-2018 16:20:57 Get:52 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi-krb5-2 amd64 1.13.2+dfsg-5ubuntu2 [120 kB] build 20-Aug-2018 16:20:57 Get:53 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhcrypto4-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [85.0 kB] build 20-Aug-2018 16:20:57 Get:54 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimbase1-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [29.3 kB] build 20-Aug-2018 16:20:57 Get:55 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwind0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [47.8 kB] build 20-Aug-2018 16:20:57 Get:56 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhx509-5-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [107 kB] build 20-Aug-2018 16:20:57 Get:57 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 20-Aug-2018 16:20:57 Get:58 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 20-Aug-2018 16:20:57 Get:59 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 20-Aug-2018 16:20:57 Get:60 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 20-Aug-2018 16:20:57 Get:61 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 20-Aug-2018 16:20:57 Get:62 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu3.3 [161 kB] build 20-Aug-2018 16:20:57 Get:63 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d-1ubuntu0.1 [54.4 kB] build 20-Aug-2018 16:20:57 Get:64 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcurl3-gnutls amd64 7.47.0-1ubuntu2.8 [185 kB] build 20-Aug-2018 16:20:57 Get:65 http://archive.ubuntu.com/ubuntu xenial/main amd64 libedit2 amd64 3.1-20150325-1ubuntu2 [76.5 kB] build 20-Aug-2018 16:20:57 Get:66 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 20-Aug-2018 16:20:58 Get:67 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules amd64 2.1.26.dfsg1-14build1 [47.5 kB] build 20-Aug-2018 16:20:58 Get:68 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 20-Aug-2018 16:20:58 Get:69 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxmuu1 amd64 2:1.1.2-2 [9674 B] build 20-Aug-2018 16:20:58 Get:70 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 openssh-client amd64 1:7.2p2-4ubuntu2.4 [589 kB] build 20-Aug-2018 16:20:58 Get:71 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 rsync amd64 3.1.1-3ubuntu1.2 [329 kB] build 20-Aug-2018 16:20:58 Get:72 http://archive.ubuntu.com/ubuntu xenial/main amd64 xauth amd64 1:1.0.9-1ubuntu2 [22.7 kB] build 20-Aug-2018 16:20:58 Get:73 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 20-Aug-2018 16:20:58 Get:74 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 20-Aug-2018 16:20:58 Get:75 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 20-Aug-2018 16:20:58 Get:76 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB] build 20-Aug-2018 16:20:58 Get:77 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB] build 20-Aug-2018 16:20:58 Get:78 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 20-Aug-2018 16:20:58 Get:79 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 20-Aug-2018 16:20:58 Get:80 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarmadillo6 amd64 1:6.500.5+dfsg-1 [75.2 kB] build 20-Aug-2018 16:20:58 Get:81 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 20-Aug-2018 16:20:58 Get:82 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 20-Aug-2018 16:20:58 Get:83 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libepsilon1 amd64 0.9.2-3ubuntu1 [41.0 kB] build 20-Aug-2018 16:20:58 Get:84 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libfreexl1 amd64 1.0.2-1 [33.6 kB] build 20-Aug-2018 16:20:58 Get:85 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-3.5.0 amd64 3.5.0-1ubuntu2 [477 kB] build 20-Aug-2018 16:20:58 Get:86 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-c1v5 amd64 3.5.0-1ubuntu2 [52.4 kB] build 20-Aug-2018 16:20:58 Get:87 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgif7 amd64 5.1.4-0.3~16.04 [30.5 kB] build 20-Aug-2018 16:20:58 Get:88 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] build 20-Aug-2018 16:20:58 Get:89 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf4-0-alt amd64 4.2.10-3.2 [264 kB] build 20-Aug-2018 16:20:58 Get:90 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libaec0 amd64 0.3.2-1 [18.0 kB] build 20-Aug-2018 16:20:58 Get:91 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsz2 amd64 0.3.2-1 [5048 B] build 20-Aug-2018 16:20:58 Get:92 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf5-10 amd64 1.8.16+docs-4ubuntu1 [995 kB] build 20-Aug-2018 16:20:58 Get:93 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjasper1 amd64 1.900.1-debian1-2.4ubuntu1.2 [131 kB] build 20-Aug-2018 16:20:58 Get:94 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libminizip1 amd64 1.1-8 [20.3 kB] build 20-Aug-2018 16:20:58 Get:95 http://archive.ubuntu.com/ubuntu xenial/universe amd64 liburiparser1 amd64 0.8.4-1 [38.0 kB] build 20-Aug-2018 16:20:58 Get:96 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlbase1 amd64 1.3.0-1 [43.9 kB] build 20-Aug-2018 16:20:58 Get:97 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmldom1 amd64 1.3.0-1 [175 kB] build 20-Aug-2018 16:20:58 Get:98 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlengine1 amd64 1.3.0-1 [77.1 kB] build 20-Aug-2018 16:20:58 Get:99 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 mysql-common all 5.7.23-0ubuntu0.16.04.1 [15.4 kB] build 20-Aug-2018 16:20:58 Get:100 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmysqlclient20 amd64 5.7.23-0ubuntu0.16.04.1 [812 kB] build 20-Aug-2018 16:20:58 Get:101 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build 20-Aug-2018 16:21:00 Get:109 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfontconfig1 amd64 2.11.94-0ubuntu1.1 [131 kB] build 20-Aug-2018 16:21:00 Get:110 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtiff5 amd64 4.0.6-1ubuntu0.4 [148 kB] build 20-Aug-2018 16:21:00 Get:111 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpoppler58 amd64 0.41.0-0ubuntu1.7 [758 kB] build 20-Aug-2018 16:21:00 Get:112 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpq5 amd64 9.5.14-0ubuntu0.16.04 [78.8 kB] build 20-Aug-2018 16:21:00 Get:113 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libspatialite7 amd64 4.3.0a-5 [1222 kB] build 20-Aug-2018 16:21:00 Get:114 http://archive.ubuntu.com/ubuntu xenial/main amd64 libwebp5 amd64 0.4.4-1 [165 kB] build 20-Aug-2018 16:21:00 Get:115 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libxerces-c3.1 amd64 3.1.3+debian-1 [842 kB] build 20-Aug-2018 16:21:00 Get:116 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst amd64 2.3.1-4.1 [13.1 kB] build 20-Aug-2018 16:21:01 Get:117 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst1debian2 amd64 2.3.1-4.1 [41.1 kB] build 20-Aug-2018 16:21:01 Get:118 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgdal1i amd64 1.11.3+dfsg-3build2 [4013 kB] build 20-Aug-2018 16:21:01 Get:119 http://archive.ubuntu.com/ubuntu xenial/universe amd64 gdal-bin amd64 1.11.3+dfsg-3build2 [226 kB] build 20-Aug-2018 16:21:01 Get:120 http://archive.ubuntu.com/ubuntu xenial/main amd64 liberror-perl all 0.17-1.2 [19.6 kB] build 20-Aug-2018 16:21:01 Get:121 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 git-man all 1:2.7.4-0ubuntu1.4 [736 kB] build 20-Aug-2018 16:21:01 Get:122 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 git amd64 1:2.7.4-0ubuntu1.4 [3158 kB] build 20-Aug-2018 16:21:01 Get:123 http://archive.ubuntu.com/ubuntu xenial/universe amd64 p7zip-full amd64 9.20.1~dfsg.1-4.2 [919 kB] build 20-Aug-2018 16:21:01 Get:124 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 patch amd64 2.7.5-1ubuntu0.16.04.1 [90.5 kB] build 20-Aug-2018 16:21:02 Get:125 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-numpy amd64 1:1.11.0-1ubuntu1 [1763 kB] build 20-Aug-2018 16:21:02 Get:126 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-gdal amd64 1.11.3+dfsg-3build2 [423 kB] build 20-Aug-2018 16:21:02 Get:127 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-pyproj amd64 1.9.5.1-1build1 [41.0 kB] build 20-Aug-2018 16:21:02 Get:128 http://archive.ubuntu.com/ubuntu xenial/main amd64 rename all 0.20-4 [12.0 kB] build 20-Aug-2018 16:21:02 Get:129 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-bin amd64 4.9.2-2 [31.3 kB] build 20-Aug-2018 16:21:02 debconf: delaying package configuration, since apt-utils is not installed build 20-Aug-2018 16:21:02 Fetched 51.6 MB in 6s (7521 kB/s) build 20-Aug-2018 16:21:02 (Reading database 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database ... 95% build 20-Aug-2018 16:21:02 (Reading database ... 100% build 20-Aug-2018 16:21:02 (Reading database ... 6036 files and directories currently installed.) build 20-Aug-2018 16:21:02 Preparing to unpack .../perl-base_5.22.1-9ubuntu0.5_amd64.deb ... build 20-Aug-2018 16:21:03 Unpacking perl-base (5.22.1-9ubuntu0.5) over (5.22.1-9ubuntu0.3) ... build 20-Aug-2018 16:21:18 Setting up perl-base (5.22.1-9ubuntu0.5) ... build 20-Aug-2018 16:21:18 Selecting previously unselected package libatm1:amd64. build 20-Aug-2018 16:21:18 (Reading database ... build 20-Aug-2018 16:21:18 (Reading database ... 5% build 20-Aug-2018 16:21:18 (Reading database ... 10% build 20-Aug-2018 16:21:18 (Reading database ... 15% build 20-Aug-2018 16:21:18 (Reading database ... 20% build 20-Aug-2018 16:21:18 (Reading database ... 25% build 20-Aug-2018 16:21:18 (Reading database ... 30% build 20-Aug-2018 16:21:18 (Reading database ... 35% build 20-Aug-2018 16:21:18 (Reading database ... 40% build 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build 20-Aug-2018 16:22:27 Setting up libx11-data (2:1.6.3-1ubuntu2) ... build 20-Aug-2018 16:22:27 Setting up libx11-6:amd64 (2:1.6.3-1ubuntu2) ... build 20-Aug-2018 16:22:27 Setting up libxext6:amd64 (2:1.3.3-1) ... build 20-Aug-2018 16:22:27 Setting up sgml-base (1.26+nmu4ubuntu1) ... build 20-Aug-2018 16:22:27 Setting up libjpeg-turbo8:amd64 (1.4.2-0ubuntu3.1) ... build 20-Aug-2018 16:22:28 Setting up liblcms2-2:amd64 (2.6-3ubuntu2) ... build 20-Aug-2018 16:22:28 Setting up libblas-common (3.6.0-2ubuntu2) ... build 20-Aug-2018 16:22:28 Setting up libblas3 (3.6.0-2ubuntu2) ... build 20-Aug-2018 16:22:28 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 20-Aug-2018 16:22:28 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 20-Aug-2018 16:22:28 Setting up perl-modules-5.22 (5.22.1-9ubuntu0.5) ... build 20-Aug-2018 16:22:28 Setting up libperl5.22:amd64 (5.22.1-9ubuntu0.5) ... build 20-Aug-2018 16:22:28 Setting up perl (5.22.1-9ubuntu0.5) ... build 20-Aug-2018 16:22:29 update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode build 20-Aug-2018 16:22:29 Setting up libjbig0:amd64 (2.1-3.1) ... build 20-Aug-2018 16:22:29 Setting up libmagic1:amd64 (1:5.25-2ubuntu1.1) ... build 20-Aug-2018 16:22:29 Setting up file (1:5.25-2ubuntu1.1) ... build 20-Aug-2018 16:22:29 Setting up iproute2 (4.3.0-1ubuntu3.16.04.3) ... build 20-Aug-2018 16:22:31 Setting up ifupdown (0.8.10ubuntu1.4) ... build 20-Aug-2018 16:22:31 Creating /etc/network/interfaces. build 20-Aug-2018 16:22:32 Setting up libisc-export160 (1:9.10.3.dfsg.P4-8ubuntu1.10) ... build 20-Aug-2018 16:22:32 Setting up libdns-export162 (1:9.10.3.dfsg.P4-8ubuntu1.10) ... build 20-Aug-2018 16:22:32 Setting up isc-dhcp-client (4.3.3-5ubuntu12.10) ... build 20-Aug-2018 16:22:32 Setting up isc-dhcp-common (4.3.3-5ubuntu12.10) ... build 20-Aug-2018 16:22:32 Setting up less (481-2.1ubuntu0.2) ... build 20-Aug-2018 16:22:32 debconf: unable to initialize frontend: Dialog build 20-Aug-2018 16:22:32 debconf: (TERM is not set, so the dialog frontend is not usable.) build 20-Aug-2018 16:22:32 debconf: falling back to frontend: Readline build 20-Aug-2018 16:22:32 Setting up libbsd0:amd64 (0.8.2-1) ... build 20-Aug-2018 16:22:33 Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ... build 20-Aug-2018 16:22:33 Setting up libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ... build 20-Aug-2018 16:22:33 Setting up libhogweed4:amd64 (3.2-1ubuntu0.16.04.1) ... build 20-Aug-2018 16:22:33 Setting up libidn11:amd64 (1.32-3ubuntu1.2) ... build 20-Aug-2018 16:22:33 Setting up libp11-kit0:amd64 (0.23.2-5~ubuntu16.04.1) ... build 20-Aug-2018 16:22:33 Setting up libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 20-Aug-2018 16:22:33 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 20-Aug-2018 16:22:34 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ... build 20-Aug-2018 16:22:34 Setting up libxtables11:amd64 (1.6.0-2ubuntu3) ... build 20-Aug-2018 16:22:34 Setting up netbase (5.3) ... build 20-Aug-2018 16:22:34 Setting up ucf (3.0036) ... build 20-Aug-2018 16:22:34 debconf: unable to initialize frontend: Dialog build 20-Aug-2018 16:22:34 debconf: (TERM is not set, so the dialog frontend is not usable.) build 20-Aug-2018 16:22:34 debconf: falling back to frontend: Readline build 20-Aug-2018 16:22:34 Setting up krb5-locales (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:22:35 Setting up libroken18-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:22:35 Setting up libasn1-8-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:22:35 Setting up libkrb5support0:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:22:35 Setting up libk5crypto3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:22:36 Setting up libkeyutils1:amd64 (1.5.9-8ubuntu1) ... build 20-Aug-2018 16:22:36 Setting up libkrb5-3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:22:36 Setting up libgssapi-krb5-2:amd64 (1.13.2+dfsg-5ubuntu2) ... build 20-Aug-2018 16:22:36 Setting up libhcrypto4-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:22:36 Setting up libheimbase1-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:22:37 Setting up libwind0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:22:37 Setting up libhx509-5-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:22:37 Setting up libkrb5-26-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:22:37 Setting up libheimntlm0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:22:37 Setting up libgssapi3-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 20-Aug-2018 16:22:37 Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-14build1) ... build 20-Aug-2018 16:22:37 Setting up libsasl2-2:amd64 (2.1.26.dfsg1-14build1) ... build 20-Aug-2018 16:22:38 Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu3.3) ... build 20-Aug-2018 16:22:38 Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d-1ubuntu0.1) ... build 20-Aug-2018 16:22:38 Setting up libcurl3-gnutls:amd64 (7.47.0-1ubuntu2.8) ... build 20-Aug-2018 16:22:38 Setting up libedit2:amd64 (3.1-20150325-1ubuntu2) ... build 20-Aug-2018 16:22:38 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 20-Aug-2018 16:22:38 Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-14build1) ... build 20-Aug-2018 16:22:38 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ... build 20-Aug-2018 16:22:38 Setting up libxmuu1:amd64 (2:1.1.2-2) ... build 20-Aug-2018 16:22:39 Setting up openssh-client (1:7.2p2-4ubuntu2.4) ... build 20-Aug-2018 16:22:39 Setting up rsync (3.1.1-3ubuntu1.2) ... build 20-Aug-2018 16:22:39 invoke-rc.d: could not determine current runlevel build 20-Aug-2018 16:22:39 invoke-rc.d: policy-rc.d denied execution of restart. build 20-Aug-2018 16:22:39 Setting up xauth (1:1.0.9-1ubuntu2) ... build 20-Aug-2018 16:22:39 Setting up xml-core (0.13+nmu2) ... build 20-Aug-2018 16:22:40 Setting up fonts-dejavu-core (2.35-1) ... build 20-Aug-2018 16:22:41 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 20-Aug-2018 16:22:43 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 20-Aug-2018 16:22:43 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 20-Aug-2018 16:22:43 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 20-Aug-2018 16:22:43 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 20-Aug-2018 16:22:43 Setting up libarpack2 (3.3.0-1build2) ... build 20-Aug-2018 16:22:44 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 20-Aug-2018 16:22:44 Setting up libdap17v5:amd64 (3.15.1-7) ... build 20-Aug-2018 16:22:44 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 20-Aug-2018 16:22:44 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 20-Aug-2018 16:22:44 Setting up libfreexl1:amd64 (1.0.2-1) ... build 20-Aug-2018 16:22:44 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 20-Aug-2018 16:22:44 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 20-Aug-2018 16:22:45 Setting up libgif7:amd64 (5.1.4-0.3~16.04) ... build 20-Aug-2018 16:22:45 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 20-Aug-2018 16:22:45 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 20-Aug-2018 16:22:45 Setting up libaec0:amd64 (0.3.2-1) ... build 20-Aug-2018 16:22:45 Setting up libsz2:amd64 (0.3.2-1) ... build 20-Aug-2018 16:22:45 Setting up libhdf5-10:amd64 (1.8.16+docs-4ubuntu1) ... build 20-Aug-2018 16:22:45 Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.2) ... build 20-Aug-2018 16:22:45 Setting up libminizip1:amd64 (1.1-8) ... build 20-Aug-2018 16:22:46 Setting up liburiparser1:amd64 (0.8.4-1) ... build 20-Aug-2018 16:22:46 Setting up libkmlbase1:amd64 (1.3.0-1) ... build 20-Aug-2018 16:22:46 Setting up libkmldom1:amd64 (1.3.0-1) ... build 20-Aug-2018 16:22:47 Setting up libkmlengine1:amd64 (1.3.0-1) ... build 20-Aug-2018 16:22:47 Setting up mysql-common (5.7.23-0ubuntu0.16.04.1) ... build 20-Aug-2018 16:22:47 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 20-Aug-2018 16:22:47 Setting up libmysqlclient20:amd64 (5.7.23-0ubuntu0.16.04.1) ... build 20-Aug-2018 16:22:47 Setting up libnetcdf11 (1:4.4.0-2) ... build 20-Aug-2018 16:22:47 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 20-Aug-2018 16:22:47 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 20-Aug-2018 16:22:48 Setting up proj-data (4.9.2-2) ... build 20-Aug-2018 16:22:48 Setting up libproj9 (4.9.2-2) ... build 20-Aug-2018 16:22:48 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 20-Aug-2018 16:22:48 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 20-Aug-2018 16:22:48 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 20-Aug-2018 16:22:48 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 20-Aug-2018 16:22:48 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 20-Aug-2018 16:22:49 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 20-Aug-2018 16:22:49 Setting up libpq5:amd64 (9.5.14-0ubuntu0.16.04) ... build 20-Aug-2018 16:22:49 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 20-Aug-2018 16:22:49 Setting up libwebp5:amd64 (0.4.4-1) ... build 20-Aug-2018 16:22:49 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 20-Aug-2018 16:22:49 Setting up liberror-perl (0.17-1.2) ... build 20-Aug-2018 16:22:49 Setting up git-man (1:2.7.4-0ubuntu1.4) ... build 20-Aug-2018 16:22:49 Setting up git (1:2.7.4-0ubuntu1.4) ... build 20-Aug-2018 16:22:50 Setting up p7zip-full (9.20.1~dfsg.1-4.2) ... build 20-Aug-2018 16:22:50 Setting up patch (2.7.5-1ubuntu0.16.04.1) ... build 20-Aug-2018 16:22:50 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 20-Aug-2018 16:22:52 Setting up python-pyproj (1.9.5.1-1build1) ... build 20-Aug-2018 16:22:53 Setting up rename (0.20-4) ... build 20-Aug-2018 16:22:53 update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode build 20-Aug-2018 16:22:53 Setting up proj-bin (4.9.2-2) ... build 20-Aug-2018 16:22:53 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 20-Aug-2018 16:22:53 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:22:53 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:22:53 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 20-Aug-2018 16:22:55 Setting up odbcinst (2.3.1-4.1) ... build 20-Aug-2018 16:22:55 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 20-Aug-2018 16:22:55 Processing triggers for systemd (229-4ubuntu21.2) ... build 20-Aug-2018 16:22:55 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 20-Aug-2018 16:22:56 Collecting pip==9.0.3 build 20-Aug-2018 16:22:56 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 20-Aug-2018 16:22:57 Installing collected packages: pip build 20-Aug-2018 16:22:57 Found existing installation: pip 8.1.1 build 20-Aug-2018 16:22:57 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 20-Aug-2018 16:22:57 Successfully installed pip-9.0.3 build 20-Aug-2018 16:22:57 You are using pip version 9.0.3, however version 18.0 is available. build 20-Aug-2018 16:22:57 You should consider upgrading via the 'pip install --upgrade pip' command. build 20-Aug-2018 16:22:58 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 20-Aug-2018 16:22:58 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 20-Aug-2018 16:22:58 Collecting pika==0.10.0 (from -r /home/clowder/requirements.txt (line 2)) build 20-Aug-2018 16:22:58 Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB) build 20-Aug-2018 16:22:58 Collecting requests==2.10.0 (from -r /home/clowder/requirements.txt (line 3)) build 20-Aug-2018 16:22:58 Downloading https://files.pythonhosted.org/packages/99/b4/63d99ba8e189c47d906b43bae18af4396e336f2b1bfec86af31efe2d2cb8/requests-2.10.0-py2.py3-none-any.whl (506kB) build 20-Aug-2018 16:22:58 Collecting wheel==0.24.0 (from -r /home/clowder/requirements.txt (line 4)) build 20-Aug-2018 16:22:59 Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB) build 20-Aug-2018 16:22:59 Collecting xmltodict==0.11.0 (from -r /home/clowder/requirements.txt (line 6)) build 20-Aug-2018 16:22:59 Downloading https://files.pythonhosted.org/packages/42/a9/7e99652c6bc619d19d58cdd8c47560730eb5825d43a7e25db2e1d776ceb7/xmltodict-0.11.0-py2.py3-none-any.whl build 20-Aug-2018 16:22:59 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 20-Aug-2018 16:22:59 Downloading https://files.pythonhosted.org/packages/fd/ce/aa4a385e3e9fd351737fd2b07edaa56e7a730448465aceda6b35086a0d9b/httplib2-0.11.3.tar.gz (215kB) build 20-Aug-2018 16:22:59 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 20-Aug-2018 16:22:59 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 20-Aug-2018 16:23:00 Installing collected packages: httplib2, gisdata, gsconfig, pika, requests, wheel, xmltodict build 20-Aug-2018 16:23:00 Running setup.py install for httplib2: started build 20-Aug-2018 16:23:00 Running setup.py install for httplib2: finished with status 'done' build 20-Aug-2018 16:23:00 Running setup.py install for gisdata: started build 20-Aug-2018 16:23:00 Running setup.py install for gisdata: finished with status 'done' build 20-Aug-2018 16:23:00 Running setup.py install for gsconfig: started build 20-Aug-2018 16:23:00 Running setup.py install for gsconfig: finished with status 'done' build 20-Aug-2018 16:23:00 Found existing installation: pika 0.11.2 build 20-Aug-2018 16:23:00 Uninstalling pika-0.11.2: build 20-Aug-2018 16:23:02 Successfully uninstalled pika-0.11.2 build 20-Aug-2018 16:23:02 Found existing installation: requests 2.18.4 build 20-Aug-2018 16:23:02 Uninstalling requests-2.18.4: build 20-Aug-2018 16:23:03 Successfully uninstalled requests-2.18.4 build 20-Aug-2018 16:23:04 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.11.3 pika-0.10.0 requests-2.10.0 wheel-0.24.0 xmltodict-0.11.0 build 20-Aug-2018 16:23:04 You are using pip version 9.0.3, however version 18.0 is available. build 20-Aug-2018 16:23:04 You should consider upgrading via the 'pip install --upgrade pip' command. build 20-Aug-2018 16:23:08 Removing intermediate container 3890470a49a2 build 20-Aug-2018 16:23:08 ---> 1960b7e1f22c build 20-Aug-2018 16:23:08 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 20-Aug-2018 16:23:09 ---> Running in 182ed2cf0c73 build 20-Aug-2018 16:23:09 Removing intermediate container 182ed2cf0c73 build 20-Aug-2018 16:23:09 ---> 6b075e4c9a3c build 20-Aug-2018 16:23:09 Step 6/8 : CMD ["extractor"] build 20-Aug-2018 16:23:09 ---> Running in f8698ae3e3bb build 20-Aug-2018 16:23:09 Removing intermediate container f8698ae3e3bb build 20-Aug-2018 16:23:09 ---> 50c48df22309 build 20-Aug-2018 16:23:09 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.pycsw.extractor" MAIN_SCRIPT="ncsa.geo.pycsw.py" GEOSERVER_URL="" GEOSERVER_WORKSPACE="clowder" PYCSW_URL="http://localhost:8000/pycsw" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 20-Aug-2018 16:23:09 ---> Running in cb7d2a9fa068 build 20-Aug-2018 16:23:10 Removing intermediate container cb7d2a9fa068 build 20-Aug-2018 16:23:10 ---> b27c81dfdf02 build 20-Aug-2018 16:23:10 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json pycsw_insert_template.xml /home/clowder/ build 20-Aug-2018 16:23:10 ---> 41057bd11038 build 20-Aug-2018 16:23:10 Successfully built 41057bd11038 build 20-Aug-2018 16:23:10 Successfully tagged 31461:latest build 20-Aug-2018 16:23:11 Untagged: 31461:latest build 20-Aug-2018 16:23:11 Untagged: clowder/extractors-geotiff-metadata:latest build 20-Aug-2018 16:23:11 Untagged: clowder/extractors-geotiff-preview:latest build 20-Aug-2018 16:23:11 Untagged: clowder/extractors-geoshp-preview:latest build 20-Aug-2018 16:23:11 Untagged: clowder/extractors-pycsw:latest simple 20-Aug-2018 16:23:11 Finished task 'docker build' with result: Success simple 20-Aug-2018 16:23:11 Running post build plugin 'Docker Container Cleanup' simple 20-Aug-2018 16:23:11 Running post build plugin 'NCover Results Collector' simple 20-Aug-2018 16:23:11 Running post build plugin 'Clover Results Collector' simple 20-Aug-2018 16:23:11 Running post build plugin 'npm Cache Cleanup' simple 20-Aug-2018 16:23:11 Running post build plugin 'Artifact Copier' simple 20-Aug-2018 16:23:11 Finalising the build... simple 20-Aug-2018 16:23:11 Stopping timer. simple 20-Aug-2018 16:23:11 Build CATS-EXGEO13-JOB1-4 completed. simple 20-Aug-2018 16:23:11 Running on server: post build plugin 'NCover Results Collector' simple 20-Aug-2018 16:23:11 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 20-Aug-2018 16:23:12 Running on server: post build plugin 'Clover Delta Calculator' simple 20-Aug-2018 16:23:12 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 20-Aug-2018 16:23:12 All post build plugins have finished simple 20-Aug-2018 16:23:12 Generating build results summary... simple 20-Aug-2018 16:23:12 Saving build results to disk... simple 20-Aug-2018 16:23:12 Logging substituted variables... simple 20-Aug-2018 16:23:12 Indexing build results... simple 20-Aug-2018 16:23:12 Finished building CATS-EXGEO13-JOB1-4.