simple 27-Aug-2018 11:13:24 Build Clowder - extractors-geo - SYN-172-Create-unique-workspace-name-in-the-geoserver - Default Job #6 (CATS-EXGEO13-JOB1-6) started building on agent buildserver-3.os.ncsa.edu simple 27-Aug-2018 11:13:24 Remote agent on host buildserver-3.os.ncsa.edu simple 27-Aug-2018 11:13:24 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1 simple 27-Aug-2018 11:13:24 Executing build Clowder - extractors-geo - SYN-172-Create-unique-workspace-name-in-the-geoserver - Default Job #6 (CATS-EXGEO13-JOB1-6) simple 27-Aug-2018 11:13:24 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 27-Aug-2018 11:13:24 Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1 simple 27-Aug-2018 11:13:24 Updating source code to revision: 94185fe77e71c8a6dda0178594e7699df6f4c7f7 simple 27-Aug-2018 11:13:24 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1/.git'. simple 27-Aug-2018 11:13:24 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1/.git/ simple 27-Aug-2018 11:13:24 Fetching 'refs/heads/SYN-172-Create-unique-workspace-name-in-the-geoserver' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git'. Will try to do a shallow fetch. simple 27-Aug-2018 11:13:24 Warning: Permanently added '[127.0.0.1]:46665' (RSA) to the list of known hosts. simple 27-Aug-2018 11:13:25 From ssh://127.0.0.1:46665/cats/extractors-geo simple 27-Aug-2018 11:13:25 * [new branch] SYN-172-Create-unique-workspace-name-in-the-geoserver -> SYN-172-Create-unique-workspace-name-in-the-geoserver simple 27-Aug-2018 11:13:25 Checking out revision 94185fe77e71c8a6dda0178594e7699df6f4c7f7. simple 27-Aug-2018 11:13:25 Switched to branch 'SYN-172-Create-unique-workspace-name-in-the-geoserver' simple 27-Aug-2018 11:13:25 Updated source code to revision: 94185fe77e71c8a6dda0178594e7699df6f4c7f7 simple 27-Aug-2018 11:13:25 Finished task 'Checkout Default Repository' with result: Success simple 27-Aug-2018 11:13:25 Running pre-build action: VCS Version Collector simple 27-Aug-2018 11:13:25 Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 27-Aug-2018 11:13:25 Beginning to execute external process for build 'Clowder - extractors-geo - SYN-172-Create-unique-workspace-name-in-the-geoserver - Default Job #6 (CATS-EXGEO13-JOB1-6)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1\n ... using extra environment variables: 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- extractors-geo - SYN-172-Create-unique-workspace-name-in-the-geoserver - Default Job\nbamboo_planRepository_1_revision=94185fe77e71c8a6dda0178594e7699df6f4c7f7\nbamboo_capability_system_builder_command_python3=/usr/bin/python3\nbamboo_repository_name=extractors-geo\nbamboo_repository_163708934_branch_name=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_buildFailed=false\nbamboo_capability_system_docker_executable=/usr/bin/docker\nbamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt\nbamboo_planRepository_branch=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/usr/bin/git\nbamboo_repository_git_username=\nbamboo_planRepository_1_previousRevision=af883ffc77c7b738832fbfbea8cf7c3f7d5d0507\nbamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13\nbamboo_planRepository_branchDisplayName=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs\nbamboo_repository_163708934_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git\nbamboo_planRepository_1_type=bbserver\nbamboo_planRepository_branchName=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7\nbamboo_capability_system_hostname=buildserver-1\nbamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_software_mongo=/usr/bin/mongo\nbamboo_plan_storageTag=plan-163512331\nbamboo_repository_163708934_git_branch=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs\nbamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl\nbamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=bbserver\nbamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache\nbamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git\nbamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node\nbamboo_repository_163708934_name=extractors-geo\nbamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4\nbamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9\nbamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp\nbamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXGEO13-JOB1\nbamboo_planKey=CATS-EXGEO13\nbamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-geo.git\nbamboo_planRepository_username=\nbamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41\nbamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh\nbamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60\nbamboo_planRepository_1_branchName=SYN-172-Create-unique-workspace-name-in-the-geoserver\nbamboo_repository_163708934_revision_number=94185fe77e71c8a6dda0178594e7699df6f4c7f7\n build 27-Aug-2018 11:13:25 Sending build context to Docker daemon 1.324MB build 27-Aug-2018 11:13:25 build 27-Aug-2018 11:13:25 Step 1/8 : FROM clowder/pyclowder:2 build 27-Aug-2018 11:13:26 2: Pulling from clowder/pyclowder build 27-Aug-2018 11:13:26 b234f539f7a1: Pulling fs layer build 27-Aug-2018 11:13:26 55172d420b43: Pulling fs layer build 27-Aug-2018 11:13:26 5ba5bbeb6b91: Pulling fs layer build 27-Aug-2018 11:13:26 43ae2841ad7a: Pulling fs layer build 27-Aug-2018 11:13:26 f6c9c6de4190: Pulling fs layer build 27-Aug-2018 11:13:26 43ae2841ad7a: Waiting build 27-Aug-2018 11:13:26 d09498741374: Pulling fs layer build 27-Aug-2018 11:13:26 f6c9c6de4190: Waiting build 27-Aug-2018 11:13:26 00f9ba584920: Pulling fs layer build 27-Aug-2018 11:13:26 5693300db94c: Pulling fs layer build 27-Aug-2018 11:13:26 4af4b0c37187: Pulling fs layer build 27-Aug-2018 11:13:26 d3c9efd4d105: Pulling fs layer build 27-Aug-2018 11:13:26 5693300db94c: Waiting build 27-Aug-2018 11:13:26 4af4b0c37187: Waiting build 27-Aug-2018 11:13:26 d09498741374: Waiting build 27-Aug-2018 11:13:26 d3c9efd4d105: Waiting build 27-Aug-2018 11:13:26 00f9ba584920: Waiting build 27-Aug-2018 11:13:26 55172d420b43: Download complete build 27-Aug-2018 11:13:26 5ba5bbeb6b91: Verifying Checksum build 27-Aug-2018 11:13:26 5ba5bbeb6b91: Download complete build 27-Aug-2018 11:13:26 43ae2841ad7a: Verifying Checksum build 27-Aug-2018 11:13:26 43ae2841ad7a: Download complete build 27-Aug-2018 11:13:26 f6c9c6de4190: Verifying Checksum build 27-Aug-2018 11:13:26 f6c9c6de4190: Download complete build 27-Aug-2018 11:13:26 00f9ba584920: Verifying Checksum build 27-Aug-2018 11:13:26 00f9ba584920: Download complete build 27-Aug-2018 11:13:27 5693300db94c: Verifying Checksum build 27-Aug-2018 11:13:27 5693300db94c: Download complete build 27-Aug-2018 11:13:27 d09498741374: Verifying Checksum build 27-Aug-2018 11:13:27 d09498741374: Download complete build 27-Aug-2018 11:13:27 4af4b0c37187: Download complete build 27-Aug-2018 11:13:27 b234f539f7a1: Download complete build 27-Aug-2018 11:13:27 d3c9efd4d105: Download complete build 27-Aug-2018 11:13:29 b234f539f7a1: Pull complete build 27-Aug-2018 11:13:29 55172d420b43: Pull complete build 27-Aug-2018 11:13:30 5ba5bbeb6b91: Pull complete build 27-Aug-2018 11:13:30 43ae2841ad7a: Pull complete build 27-Aug-2018 11:13:30 f6c9c6de4190: Pull complete build 27-Aug-2018 11:13:31 d09498741374: Pull complete build 27-Aug-2018 11:13:32 00f9ba584920: Pull complete build 27-Aug-2018 11:13:32 5693300db94c: Pull complete build 27-Aug-2018 11:13:32 4af4b0c37187: Pull complete build 27-Aug-2018 11:13:33 d3c9efd4d105: Pull complete build 27-Aug-2018 11:13:33 Digest: sha256:c7db6d13f3f9a1aa9c624dc4782470a230d37d2cdee737d45d556f8e8d8948b3 build 27-Aug-2018 11:13:33 Status: Downloaded newer image for clowder/pyclowder:2 build 27-Aug-2018 11:13:33 ---> b27d04debca2 build 27-Aug-2018 11:13:33 Step 2/8 : MAINTAINER Yong Wook Kim build 27-Aug-2018 11:13:33 ---> Running in ec20980f9342 build 27-Aug-2018 11:13:33 Removing intermediate container ec20980f9342 build 27-Aug-2018 11:13:33 ---> 36147c4b9cfa build 27-Aug-2018 11:13:33 Step 3/8 : COPY requirements.txt /home/clowder/ build 27-Aug-2018 11:13:34 ---> 1b1e921b5aa7 build 27-Aug-2018 11:13:34 Step 4/8 : RUN apt-get update && apt-get -y install python-dev python-pip python-dev build-essential python-numpy gdal-bin python-gdal python-scipy software-properties-common && apt-add-repository ppa:ubuntugis/ppa && pip install --upgrade pip==9.0.3 && pip install -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 27-Aug-2018 11:13:34 ---> Running in 017a0dbfb713 build 27-Aug-2018 11:13:35 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 27-Aug-2018 11:13:35 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 27-Aug-2018 11:13:35 Get:3 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [87.8 kB] build 27-Aug-2018 11:13:36 Get:4 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 27-Aug-2018 11:13:36 Get:5 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [699 kB] build 27-Aug-2018 11:13:36 Get:6 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 27-Aug-2018 11:13:36 Get:7 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 27-Aug-2018 11:13:36 Get:8 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 27-Aug-2018 11:13:36 Get:9 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [463 kB] build 27-Aug-2018 11:13:36 Get:10 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3748 B] build 27-Aug-2018 11:13:37 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 27-Aug-2018 11:13:37 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 27-Aug-2018 11:13:37 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 27-Aug-2018 11:13:37 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 27-Aug-2018 11:13:37 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [274 kB] build 27-Aug-2018 11:13:37 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1084 kB] build 27-Aug-2018 11:13:37 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 27-Aug-2018 11:13:37 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [873 kB] build 27-Aug-2018 11:13:37 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 27-Aug-2018 11:13:37 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7343 B] build 27-Aug-2018 11:13:37 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8086 B] build 27-Aug-2018 11:13:38 Fetched 25.5 MB in 3s (7522 kB/s) build 27-Aug-2018 11:13:39 Reading package lists... build 27-Aug-2018 11:13:40 Reading package lists... build 27-Aug-2018 11:13:40 Building dependency tree... build 27-Aug-2018 11:13:40 Reading state information... build 27-Aug-2018 11:13:40 python-pip is already the newest version (8.1.1-2ubuntu0.4). build 27-Aug-2018 11:13:40 The following additional packages will be installed: build 27-Aug-2018 11:13:40 apt apt-utils binutils bzip2 cpp cpp-5 cron dbus dh-python distro-info-data build 27-Aug-2018 11:13:40 dpkg-dev fakeroot fontconfig-config fonts-dejavu-core g++ g++-5 gcc gcc-5 build 27-Aug-2018 11:13:40 gcc-5-base gir1.2-glib-2.0 ifupdown iproute2 isc-dhcp-client isc-dhcp-common build 27-Aug-2018 11:13:40 iso-codes krb5-locales libaec0 libalgorithm-diff-perl build 27-Aug-2018 11:13:40 libalgorithm-diff-xs-perl libalgorithm-merge-perl libapt-inst2.0 build 27-Aug-2018 11:13:40 libapt-pkg5.0 libarmadillo6 libarpack2 libasan2 libasn1-8-heimdal libatm1 build 27-Aug-2018 11:13:40 libatomic1 libblas-common libblas3 libc-dev-bin libc6-dev libcap-ng0 build 27-Aug-2018 11:13:40 libcc1-0 libcilkrts5 libcurl3-gnutls libdap17v5 libdapclient6v5 libdbus-1-3 build 27-Aug-2018 11:13:40 libdbus-glib-1-2 libdns-export162 libdpkg-perl libepsilon1 libexpat1-dev build 27-Aug-2018 11:13:40 libfakeroot libfile-fcntllock-perl libfontconfig1 libfreetype6 libfreexl1 build 27-Aug-2018 11:13:40 libgcc-5-dev libgdal1i libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 27-Aug-2018 11:13:40 libgif7 libgirepository-1.0-1 libglib2.0-0 libglib2.0-data libgmp10 build 27-Aug-2018 11:13:40 libgnutls30 libgomp1 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 27-Aug-2018 11:13:40 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 27-Aug-2018 11:13:40 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libisl15 build 27-Aug-2018 11:13:40 libitm1 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 build 27-Aug-2018 11:13:40 libkeyutils1 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal build 27-Aug-2018 11:13:40 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 liblsan0 build 27-Aug-2018 11:13:40 libltdl7 libminizip1 libmnl0 libmpc3 libmpdec2 libmpfr4 libmpx0 build 27-Aug-2018 11:13:40 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 27-Aug-2018 11:13:40 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpq5 libproj9 build 27-Aug-2018 11:13:40 libpython-dev libpython2.7 libpython2.7-dev libpython3-stdlib build 27-Aug-2018 11:13:40 libpython3.5-minimal libpython3.5-stdlib libquadmath0 libroken18-heimdal build 27-Aug-2018 11:13:40 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libspatialite7 build 27-Aug-2018 11:13:40 libstdc++-5-dev libstdc++6 libsuperlu4 libsz2 libtasn1-6 libtiff5 libtsan0 build 27-Aug-2018 11:13:40 libubsan0 liburiparser1 libwebp5 libwebpmux1 libwind0-heimdal libxerces-c3.1 build 27-Aug-2018 11:13:40 libxml2 libxtables11 linux-libc-dev lsb-release make manpages manpages-dev build 27-Aug-2018 11:13:40 mysql-common netbase odbcinst odbcinst1debian2 patch perl perl-base build 27-Aug-2018 11:13:40 perl-modules-5.22 proj-bin proj-data python-apt-common python-decorator build 27-Aug-2018 11:13:40 python-imaging python-pil python2.7-dev python3 python3-apt python3-dbus build 27-Aug-2018 11:13:40 python3-gi python3-minimal python3-pycurl python3-software-properties build 27-Aug-2018 11:13:40 python3.5 python3.5-minimal rename sgml-base shared-mime-info ucf build 27-Aug-2018 11:13:40 unattended-upgrades xdg-user-dirs xml-core xz-utils build 27-Aug-2018 11:13:40 Suggested packages: build 27-Aug-2018 11:13:40 aptitude | synaptic | wajig apt-doc python-apt binutils-doc bzip2-doc build 27-Aug-2018 11:13:40 cpp-doc gcc-5-locales anacron logrotate checksecurity exim4 | postfix build 27-Aug-2018 11:13:40 | mail-transport-agent dbus-user-session | dbus-x11 debian-keyring build 27-Aug-2018 11:13:40 g++-multilib g++-5-multilib gcc-5-doc libstdc++6-5-dbg gcc-multilib autoconf build 27-Aug-2018 11:13:40 automake libtool flex bison gdb gcc-doc gcc-5-multilib libgcc1-dbg build 27-Aug-2018 11:13:40 libgomp1-dbg libitm1-dbg libatomic1-dbg libasan2-dbg liblsan0-dbg build 27-Aug-2018 11:13:40 libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx0-dbg libquadmath0-dbg ppp build 27-Aug-2018 11:13:40 rdnssd iproute2-doc resolvconf avahi-autoipd isc-dhcp-client-ddns apparmor build 27-Aug-2018 11:13:40 isoquery glibc-doc gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev build 27-Aug-2018 11:13:40 hdf4-tools libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc build 27-Aug-2018 11:13:40 odbc-postgresql tdsodbc unixodbc-bin ogdi-bin poppler-data build 27-Aug-2018 11:13:40 libsasl2-modules-otp libsasl2-modules-ldap libsasl2-modules-sql build 27-Aug-2018 11:13:40 libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal build 27-Aug-2018 11:13:40 libstdc++-5-doc lsb make-doc man-browser ed diffutils-doc perl-doc build 27-Aug-2018 11:13:40 libterm-readline-gnu-perl | libterm-readline-perl-perl gfortran python-nose build 27-Aug-2018 11:13:40 python-numpy-dbg python-numpy-doc python-pil-doc python-pil-dbg build 27-Aug-2018 11:13:40 python-scipy-doc python3-doc python3-tk python3-venv python3-apt-dbg build 27-Aug-2018 11:13:40 python-apt-doc python-dbus-doc python3-dbus-dbg libcurl4-gnutls-dev build 27-Aug-2018 11:13:40 python-pycurl-doc python3-pycurl-dbg python3.5-venv python3.5-doc build 27-Aug-2018 11:13:40 binfmt-support sgml-base-doc bsd-mailx mail-transport-agent debhelper build 27-Aug-2018 11:13:40 The following NEW packages will be installed: build 27-Aug-2018 11:13:40 apt-utils binutils build-essential bzip2 cpp cpp-5 cron dbus dh-python build 27-Aug-2018 11:13:40 distro-info-data dpkg-dev fakeroot fontconfig-config fonts-dejavu-core g++ build 27-Aug-2018 11:13:40 g++-5 gcc gcc-5 gdal-bin gir1.2-glib-2.0 ifupdown iproute2 isc-dhcp-client build 27-Aug-2018 11:13:40 isc-dhcp-common iso-codes krb5-locales libaec0 libalgorithm-diff-perl build 27-Aug-2018 11:13:40 libalgorithm-diff-xs-perl libalgorithm-merge-perl libapt-inst2.0 build 27-Aug-2018 11:13:40 libarmadillo6 libarpack2 libasan2 libasn1-8-heimdal libatm1 libatomic1 build 27-Aug-2018 11:13:40 libblas-common libblas3 libc-dev-bin libc6-dev libcap-ng0 libcc1-0 build 27-Aug-2018 11:13:40 libcilkrts5 libcurl3-gnutls libdap17v5 libdapclient6v5 libdbus-1-3 build 27-Aug-2018 11:13:40 libdbus-glib-1-2 libdns-export162 libdpkg-perl libepsilon1 libexpat1-dev build 27-Aug-2018 11:13:40 libfakeroot libfile-fcntllock-perl libfontconfig1 libfreetype6 libfreexl1 build 27-Aug-2018 11:13:40 libgcc-5-dev libgdal1i libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 27-Aug-2018 11:13:40 libgif7 libgirepository-1.0-1 libglib2.0-0 libglib2.0-data libgmp10 build 27-Aug-2018 11:13:40 libgnutls30 libgomp1 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 27-Aug-2018 11:13:40 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 27-Aug-2018 11:13:40 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libisl15 build 27-Aug-2018 11:13:40 libitm1 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 build 27-Aug-2018 11:13:40 libkeyutils1 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal build 27-Aug-2018 11:13:40 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 liblsan0 build 27-Aug-2018 11:13:40 libltdl7 libminizip1 libmnl0 libmpc3 libmpdec2 libmpfr4 libmpx0 build 27-Aug-2018 11:13:40 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 27-Aug-2018 11:13:40 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpq5 libproj9 build 27-Aug-2018 11:13:40 libpython-dev libpython2.7 libpython2.7-dev libpython3-stdlib build 27-Aug-2018 11:13:40 libpython3.5-minimal libpython3.5-stdlib libquadmath0 libroken18-heimdal build 27-Aug-2018 11:13:40 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libspatialite7 build 27-Aug-2018 11:13:40 libstdc++-5-dev libsuperlu4 libsz2 libtasn1-6 libtiff5 libtsan0 libubsan0 build 27-Aug-2018 11:13:40 liburiparser1 libwebp5 libwebpmux1 libwind0-heimdal libxerces-c3.1 libxml2 build 27-Aug-2018 11:13:40 libxtables11 linux-libc-dev lsb-release make manpages manpages-dev build 27-Aug-2018 11:13:40 mysql-common netbase odbcinst odbcinst1debian2 patch perl perl-modules-5.22 build 27-Aug-2018 11:13:40 proj-bin proj-data python-apt-common python-decorator python-dev python-gdal build 27-Aug-2018 11:13:40 python-imaging python-numpy python-pil python-scipy python2.7-dev python3 build 27-Aug-2018 11:13:40 python3-apt python3-dbus python3-gi python3-minimal python3-pycurl build 27-Aug-2018 11:13:40 python3-software-properties python3.5 python3.5-minimal rename sgml-base build 27-Aug-2018 11:13:40 shared-mime-info software-properties-common ucf unattended-upgrades build 27-Aug-2018 11:13:40 xdg-user-dirs xml-core xz-utils build 27-Aug-2018 11:13:40 The following packages will be upgraded: build 27-Aug-2018 11:13:40 apt gcc-5-base libapt-pkg5.0 libstdc++6 perl-base build 27-Aug-2018 11:13:41 5 upgraded, 188 newly installed, 0 to remove and 16 not upgraded. build 27-Aug-2018 11:13:41 Need to get 134 MB of archives. build 27-Aug-2018 11:13:41 After this operation, 468 MB of additional disk space will be used. build 27-Aug-2018 11:13:41 Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-base amd64 5.22.1-9ubuntu0.5 [1284 kB] build 27-Aug-2018 11:13:42 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 27-Aug-2018 11:13:42 Get:3 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 27-Aug-2018 11:13:42 Get:4 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libapt-pkg5.0 amd64 1.2.27 [706 kB] build 27-Aug-2018 11:13:42 Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 apt amd64 1.2.27 [1042 kB] build 27-Aug-2018 11:13:42 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 cron amd64 3.0pl1-128ubuntu2 [68.4 kB] build 27-Aug-2018 11:13:42 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatm1 amd64 1:2.5.1-1.5 [24.2 kB] build 27-Aug-2018 11:13:42 Get:8 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmnl0 amd64 1.0.3-5 [12.0 kB] build 27-Aug-2018 11:13:42 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython3.5-minimal amd64 3.5.2-2ubuntu0~16.04.4 [523 kB] build 27-Aug-2018 11:13:42 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3.5-minimal amd64 3.5.2-2ubuntu0~16.04.4 [1597 kB] build 27-Aug-2018 11:13:42 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-minimal amd64 3.5.1-3 [23.3 kB] build 27-Aug-2018 11:13:42 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpdec2 amd64 2.4.2-1 [82.6 kB] build 27-Aug-2018 11:13:42 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython3.5-stdlib amd64 3.5.2-2ubuntu0~16.04.4 [2132 kB] build 27-Aug-2018 11:13:42 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3.5 amd64 3.5.2-2ubuntu0~16.04.4 [165 kB] build 27-Aug-2018 11:13:42 Get:15 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpython3-stdlib amd64 3.5.1-3 [6818 B] build 27-Aug-2018 11:13:42 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dh-python all 2.20151103ubuntu1.1 [74.1 kB] build 27-Aug-2018 11:13:42 Get:17 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3 amd64 3.5.1-3 [8710 B] build 27-Aug-2018 11:13:42 Get:18 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgdbm3 amd64 1.8.3-13.1 [16.9 kB] build 27-Aug-2018 11:13:42 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libglib2.0-0 amd64 2.48.2-0ubuntu4 [1119 kB] build 27-Aug-2018 11:13:43 Get:20 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 27-Aug-2018 11:13:43 Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 27-Aug-2018 11:13:43 Get:22 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 27-Aug-2018 11:13:43 Get:23 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 27-Aug-2018 11:13:43 Get:24 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 27-Aug-2018 11:13:43 Get:25 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 27-Aug-2018 11:13:43 Get:26 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-modules-5.22 all 5.22.1-9ubuntu0.5 [2645 kB] build 27-Aug-2018 11:13:43 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libperl5.22 amd64 5.22.1-9ubuntu0.5 [3396 kB] build 27-Aug-2018 11:13:43 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl amd64 5.22.1-9ubuntu0.5 [238 kB] build 27-Aug-2018 11:13:43 Get:29 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 27-Aug-2018 11:13:43 Get:30 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 27-Aug-2018 11:13:43 Get:31 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpfr4 amd64 3.1.4-1 [191 kB] build 27-Aug-2018 11:13:43 Get:32 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpc3 amd64 1.0.3-1 [39.7 kB] build 27-Aug-2018 11:13:43 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libapt-inst2.0 amd64 1.2.27 [55.4 kB] build 27-Aug-2018 11:13:43 Get:34 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 apt-utils amd64 1.2.27 [196 kB] build 27-Aug-2018 11:13:43 Get:35 http://archive.ubuntu.com/ubuntu xenial/main amd64 bzip2 amd64 1.0.6-8 [32.7 kB] build 27-Aug-2018 11:13:43 Get:36 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 distro-info-data all 0.28ubuntu0.8 [4502 B] build 27-Aug-2018 11:13:43 Get:37 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 iproute2 amd64 4.3.0-1ubuntu3.16.04.3 [522 kB] build 27-Aug-2018 11:13:43 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ifupdown amd64 0.8.10ubuntu1.4 [54.9 kB] build 27-Aug-2018 11:13:43 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libisc-export160 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [153 kB] build 27-Aug-2018 11:13:43 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdns-export162 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [666 kB] build 27-Aug-2018 11:13:43 Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-client amd64 4.3.3-5ubuntu12.10 [224 kB] build 27-Aug-2018 11:13:43 Get:42 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-common amd64 4.3.3-5ubuntu12.10 [105 kB] build 27-Aug-2018 11:13:43 Get:43 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 27-Aug-2018 11:13:43 Get:44 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 27-Aug-2018 11:13:43 Get:45 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 27-Aug-2018 11:13:43 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 27-Aug-2018 11:13:43 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 27-Aug-2018 11:13:44 Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 27-Aug-2018 11:13:44 Get:49 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 27-Aug-2018 11:13:44 Get:50 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxtables11 amd64 1.6.0-2ubuntu3 [27.2 kB] build 27-Aug-2018 11:13:44 Get:51 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 lsb-release all 9.20160110ubuntu0.2 [11.8 kB] build 27-Aug-2018 11:13:44 Get:52 http://archive.ubuntu.com/ubuntu xenial/main amd64 netbase all 5.3 [12.9 kB] build 27-Aug-2018 11:13:44 Get:53 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 27-Aug-2018 11:13:44 Get:54 http://archive.ubuntu.com/ubuntu xenial/main amd64 libcap-ng0 amd64 0.7.7-1 [10.9 kB] build 27-Aug-2018 11:13:44 Get:55 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdbus-1-3 amd64 1.10.6-1ubuntu3.3 [161 kB] build 27-Aug-2018 11:13:44 Get:56 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dbus amd64 1.10.6-1ubuntu3.3 [142 kB] build 27-Aug-2018 11:13:44 Get:57 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgirepository-1.0-1 amd64 1.46.0-3ubuntu1 [88.3 kB] build 27-Aug-2018 11:13:44 Get:58 http://archive.ubuntu.com/ubuntu xenial/main amd64 gir1.2-glib-2.0 amd64 1.46.0-3ubuntu1 [127 kB] build 27-Aug-2018 11:13:44 Get:59 http://archive.ubuntu.com/ubuntu xenial/main amd64 iso-codes all 3.65-1 [2268 kB] build 27-Aug-2018 11:13:44 Get:60 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 27-Aug-2018 11:13:44 Get:61 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 27-Aug-2018 11:13:44 Get:62 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 27-Aug-2018 11:13:44 Get:63 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 27-Aug-2018 11:13:44 Get:64 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libk5crypto3 amd64 1.13.2+dfsg-5ubuntu2 [81.2 kB] build 27-Aug-2018 11:13:44 Get:65 http://archive.ubuntu.com/ubuntu xenial/main amd64 libkeyutils1 amd64 1.5.9-8ubuntu1 [9904 B] build 27-Aug-2018 11:13:44 Get:66 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-3 amd64 1.13.2+dfsg-5ubuntu2 [273 kB] build 27-Aug-2018 11:13:44 Get:67 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi-krb5-2 amd64 1.13.2+dfsg-5ubuntu2 [120 kB] build 27-Aug-2018 11:13:44 Get:68 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhcrypto4-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [85.0 kB] build 27-Aug-2018 11:13:44 Get:69 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimbase1-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [29.3 kB] build 27-Aug-2018 11:13:44 Get:70 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwind0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [47.8 kB] build 27-Aug-2018 11:13:44 Get:71 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhx509-5-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [107 kB] build 27-Aug-2018 11:13:44 Get:72 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 27-Aug-2018 11:13:44 Get:73 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 27-Aug-2018 11:13:44 Get:74 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 27-Aug-2018 11:13:44 Get:75 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 27-Aug-2018 11:13:44 Get:76 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 27-Aug-2018 11:13:44 Get:77 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu3.3 [161 kB] build 27-Aug-2018 11:13:44 Get:78 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d-1ubuntu0.1 [54.4 kB] build 27-Aug-2018 11:13:44 Get:79 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcurl3-gnutls amd64 7.47.0-1ubuntu2.8 [185 kB] build 27-Aug-2018 11:13:44 Get:80 http://archive.ubuntu.com/ubuntu xenial/main amd64 libdbus-glib-1-2 amd64 0.106-1 [67.1 kB] build 27-Aug-2018 11:13:44 Get:81 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libglib2.0-data all 2.48.2-0ubuntu4 [132 kB] build 27-Aug-2018 11:13:44 Get:82 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 27-Aug-2018 11:13:45 Get:83 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules amd64 2.1.26.dfsg1-14build1 [47.5 kB] build 27-Aug-2018 11:13:45 Get:84 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 27-Aug-2018 11:13:45 Get:85 http://archive.ubuntu.com/ubuntu xenial/main amd64 manpages all 4.04-2 [1087 kB] build 27-Aug-2018 11:13:45 Get:86 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-apt-common all 1.1.0~beta1ubuntu0.16.04.2 [16.0 kB] build 27-Aug-2018 11:13:45 Get:87 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3-apt amd64 1.1.0~beta1ubuntu0.16.04.2 [137 kB] build 27-Aug-2018 11:13:45 Get:88 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-dbus amd64 1.2.0-3 [83.1 kB] build 27-Aug-2018 11:13:45 Get:89 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-gi amd64 3.20.0-0ubuntu1 [153 kB] build 27-Aug-2018 11:13:45 Get:90 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 shared-mime-info amd64 1.5-2ubuntu0.2 [405 kB] build 27-Aug-2018 11:13:45 Get:91 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 xdg-user-dirs amd64 0.15-2ubuntu6.16.04.1 [61.8 kB] build 27-Aug-2018 11:13:45 Get:92 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 27-Aug-2018 11:13:45 Get:93 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 binutils amd64 2.26.1-1ubuntu1~16.04.6 [2311 kB] build 27-Aug-2018 11:13:45 Get:94 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc-dev-bin amd64 2.23-0ubuntu10 [68.7 kB] build 27-Aug-2018 11:13:45 Get:95 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 linux-libc-dev amd64 4.4.0-134.160 [867 kB] build 27-Aug-2018 11:13:45 Get:96 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc6-dev amd64 2.23-0ubuntu10 [2079 kB] build 27-Aug-2018 11:13:45 Get:97 http://archive.ubuntu.com/ubuntu xenial/main amd64 libisl15 amd64 0.16.1-1 [524 kB] build 27-Aug-2018 11:13:45 Get:98 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 cpp-5 amd64 5.4.0-6ubuntu1~16.04.10 [7671 kB] build 27-Aug-2018 11:13:46 Get:99 http://archive.ubuntu.com/ubuntu xenial/main amd64 cpp amd64 4:5.3.1-1ubuntu1 [27.7 kB] build 27-Aug-2018 11:13:46 Get:100 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcc1-0 amd64 5.4.0-6ubuntu1~16.04.10 [38.8 kB] build 27-Aug-2018 11:13:46 Get:101 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgomp1 amd64 5.4.0-6ubuntu1~16.04.10 [55.1 kB] build 27-Aug-2018 11:13:46 Get:102 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libitm1 amd64 5.4.0-6ubuntu1~16.04.10 [27.4 kB] build 27-Aug-2018 11:13:46 Get:103 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libatomic1 amd64 5.4.0-6ubuntu1~16.04.10 [8888 B] build 27-Aug-2018 11:13:46 Get:104 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasan2 amd64 5.4.0-6ubuntu1~16.04.10 [264 kB] build 27-Aug-2018 11:13:47 Get:105 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 liblsan0 amd64 5.4.0-6ubuntu1~16.04.10 [105 kB] build 27-Aug-2018 11:13:47 Get:106 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtsan0 amd64 5.4.0-6ubuntu1~16.04.10 [244 kB] build 27-Aug-2018 11:13:47 Get:107 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libubsan0 amd64 5.4.0-6ubuntu1~16.04.10 [95.3 kB] build 27-Aug-2018 11:13:47 Get:108 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcilkrts5 amd64 5.4.0-6ubuntu1~16.04.10 [40.1 kB] build 27-Aug-2018 11:13:47 Get:109 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmpx0 amd64 5.4.0-6ubuntu1~16.04.10 [9764 B] build 27-Aug-2018 11:13:47 Get:110 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB] build 27-Aug-2018 11:13:47 Get:111 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgcc-5-dev amd64 5.4.0-6ubuntu1~16.04.10 [2228 kB] build 27-Aug-2018 11:13:48 Get:112 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5 amd64 5.4.0-6ubuntu1~16.04.10 [8426 kB] build 27-Aug-2018 11:13:49 Get:113 http://archive.ubuntu.com/ubuntu xenial/main amd64 gcc amd64 4:5.3.1-1ubuntu1 [5244 B] build 27-Aug-2018 11:13:49 Get:114 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++-5-dev amd64 5.4.0-6ubuntu1~16.04.10 [1426 kB] build 27-Aug-2018 11:13:49 Get:115 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 g++-5 amd64 5.4.0-6ubuntu1~16.04.10 [8319 kB] build 27-Aug-2018 11:13:49 Get:116 http://archive.ubuntu.com/ubuntu xenial/main amd64 g++ amd64 4:5.3.1-1ubuntu1 [1504 B] build 27-Aug-2018 11:13:49 Get:117 http://archive.ubuntu.com/ubuntu xenial/main amd64 make amd64 4.1-6 [151 kB] build 27-Aug-2018 11:13:50 Get:118 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdpkg-perl all 1.18.4ubuntu1.4 [195 kB] build 27-Aug-2018 11:13:50 Get:119 http://archive.ubuntu.com/ubuntu xenial/main amd64 xz-utils amd64 5.1.1alpha+20120614-2ubuntu2 [78.8 kB] build 27-Aug-2018 11:13:50 Get:120 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 patch amd64 2.7.5-1ubuntu0.16.04.1 [90.5 kB] build 27-Aug-2018 11:13:50 Get:121 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 dpkg-dev all 1.18.4ubuntu1.4 [584 kB] build 27-Aug-2018 11:13:50 Get:122 http://archive.ubuntu.com/ubuntu xenial/main amd64 build-essential amd64 12.1ubuntu2 [4758 B] build 27-Aug-2018 11:13:50 Get:123 http://archive.ubuntu.com/ubuntu xenial/main amd64 libfakeroot amd64 1.20.2-1ubuntu1 [25.5 kB] build 27-Aug-2018 11:13:50 Get:124 http://archive.ubuntu.com/ubuntu xenial/main amd64 fakeroot amd64 1.20.2-1ubuntu1 [61.8 kB] build 27-Aug-2018 11:13:50 Get:125 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 27-Aug-2018 11:13:50 Get:126 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 27-Aug-2018 11:13:50 Get:127 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB] build 27-Aug-2018 11:13:51 Get:128 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 27-Aug-2018 11:13:51 Get:129 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 27-Aug-2018 11:13:51 Get:130 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarmadillo6 amd64 1:6.500.5+dfsg-1 [75.2 kB] build 27-Aug-2018 11:13:51 Get:131 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 27-Aug-2018 11:13:51 Get:132 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 27-Aug-2018 11:13:51 Get:133 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libepsilon1 amd64 0.9.2-3ubuntu1 [41.0 kB] build 27-Aug-2018 11:13:51 Get:134 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libfreexl1 amd64 1.0.2-1 [33.6 kB] build 27-Aug-2018 11:13:51 Get:135 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-3.5.0 amd64 3.5.0-1ubuntu2 [477 kB] build 27-Aug-2018 11:13:52 Get:136 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-c1v5 amd64 3.5.0-1ubuntu2 [52.4 kB] build 27-Aug-2018 11:13:52 Get:137 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgif7 amd64 5.1.4-0.3~16.04 [30.5 kB] build 27-Aug-2018 11:13:52 Get:138 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] build 27-Aug-2018 11:13:52 Get:139 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf4-0-alt amd64 4.2.10-3.2 [264 kB] build 27-Aug-2018 11:13:52 Get:140 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libaec0 amd64 0.3.2-1 [18.0 kB] build 27-Aug-2018 11:13:52 Get:141 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsz2 amd64 0.3.2-1 [5048 B] build 27-Aug-2018 11:13:52 Get:142 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf5-10 amd64 1.8.16+docs-4ubuntu1 [995 kB] build 27-Aug-2018 11:13:52 Get:143 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjasper1 amd64 1.900.1-debian1-2.4ubuntu1.2 [131 kB] build 27-Aug-2018 11:13:52 Get:144 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libminizip1 amd64 1.1-8 [20.3 kB] build 27-Aug-2018 11:13:53 Get:145 http://archive.ubuntu.com/ubuntu xenial/universe amd64 liburiparser1 amd64 0.8.4-1 [38.0 kB] build 27-Aug-2018 11:13:53 Get:146 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlbase1 amd64 1.3.0-1 [43.9 kB] build 27-Aug-2018 11:13:53 Get:147 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmldom1 amd64 1.3.0-1 [175 kB] build 27-Aug-2018 11:13:53 Get:148 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlengine1 amd64 1.3.0-1 [77.1 kB] build 27-Aug-2018 11:13:53 Get:149 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 mysql-common all 5.7.23-0ubuntu0.16.04.1 [15.4 kB] build 27-Aug-2018 11:13:53 Get:150 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmysqlclient20 amd64 5.7.23-0ubuntu0.16.04.1 [812 kB] build 27-Aug-2018 11:13:53 Get:151 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libnetcdf11 amd64 1:4.4.0-2 [286 kB] build 27-Aug-2018 11:13:53 Get:152 http://archive.ubuntu.com/ubuntu xenial/main amd64 libltdl7 amd64 2.4.6-0.1 [38.3 kB] build 27-Aug-2018 11:13:53 Get:153 http://archive.ubuntu.com/ubuntu xenial/main amd64 libodbc1 amd64 2.3.1-4.1 [180 kB] build 27-Aug-2018 11:14:00 Get:154 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-data all 4.9.2-2 [4004 kB] build 27-Aug-2018 11:14:01 Get:155 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libproj9 amd64 4.9.2-2 [143 kB] build 27-Aug-2018 11:14:01 Get:156 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libogdi3.2 amd64 3.2.0~beta2-7.1build1 [212 kB] build 27-Aug-2018 11:14:01 Get:157 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 libopenjp2-7 amd64 2.1.0-2.1ubuntu0.1 [103 kB] build 27-Aug-2018 11:14:01 Get:158 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfreetype6 amd64 2.6.1-0.1ubuntu2.3 [316 kB] build 27-Aug-2018 11:14:01 Get:159 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfontconfig1 amd64 2.11.94-0ubuntu1.1 [131 kB] build 27-Aug-2018 11:14:01 Get:160 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtiff5 amd64 4.0.6-1ubuntu0.4 [148 kB] build 27-Aug-2018 11:14:01 Get:161 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpoppler58 amd64 0.41.0-0ubuntu1.7 [758 kB] build 27-Aug-2018 11:14:01 Get:162 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpq5 amd64 9.5.14-0ubuntu0.16.04 [78.8 kB] build 27-Aug-2018 11:14:01 Get:163 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libspatialite7 amd64 4.3.0a-5 [1222 kB] build 27-Aug-2018 11:14:02 Get:164 http://archive.ubuntu.com/ubuntu xenial/main amd64 libwebp5 amd64 0.4.4-1 [165 kB] build 27-Aug-2018 11:14:02 Get:165 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libxerces-c3.1 amd64 3.1.3+debian-1 [842 kB] build 27-Aug-2018 11:14:02 Get:166 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst amd64 2.3.1-4.1 [13.1 kB] build 27-Aug-2018 11:14:02 Get:167 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst1debian2 amd64 2.3.1-4.1 [41.1 kB] build 27-Aug-2018 11:14:02 Get:168 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgdal1i amd64 1.11.3+dfsg-3build2 [4013 kB] build 27-Aug-2018 11:14:02 Get:169 http://archive.ubuntu.com/ubuntu xenial/universe amd64 gdal-bin amd64 1.11.3+dfsg-3build2 [226 kB] build 27-Aug-2018 11:14:02 Get:170 http://archive.ubuntu.com/ubuntu xenial/main amd64 libalgorithm-diff-perl all 1.19.03-1 [47.6 kB] build 27-Aug-2018 11:14:02 Get:171 http://archive.ubuntu.com/ubuntu xenial/main amd64 libalgorithm-diff-xs-perl amd64 0.04-4build1 [11.0 kB] build 27-Aug-2018 11:14:02 Get:172 http://archive.ubuntu.com/ubuntu xenial/main amd64 libalgorithm-merge-perl all 0.08-3 [12.0 kB] build 27-Aug-2018 11:14:03 Get:173 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1-dev amd64 2.1.0-7ubuntu0.16.04.3 [115 kB] build 27-Aug-2018 11:14:03 Get:174 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xenial-updates/main amd64 python-dev amd64 2.7.12-1~16.04 [1186 B] build 27-Aug-2018 11:14:05 Get:182 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-numpy amd64 1:1.11.0-1ubuntu1 [1763 kB] build 27-Aug-2018 11:14:05 Get:183 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-gdal amd64 1.11.3+dfsg-3build2 [423 kB] build 27-Aug-2018 11:14:05 Get:184 http://archive.ubuntu.com/ubuntu xenial/main amd64 libwebpmux1 amd64 0.4.4-1 [14.2 kB] build 27-Aug-2018 11:14:05 Get:185 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-pil amd64 3.1.2-0ubuntu1.1 [312 kB] build 27-Aug-2018 11:14:05 Get:186 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-imaging all 3.1.2-0ubuntu1.1 [4596 B] build 27-Aug-2018 11:14:05 Get:187 http://archive.ubuntu.com/ubuntu xenial/main amd64 python3-pycurl amd64 7.43.0-1ubuntu1 [42.3 kB] build 27-Aug-2018 11:14:05 Get:188 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python3-software-properties all 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6036 files and directories currently installed.) build 27-Aug-2018 11:14:07 Preparing to unpack .../perl-base_5.22.1-9ubuntu0.5_amd64.deb ... build 27-Aug-2018 11:14:07 Unpacking perl-base (5.22.1-9ubuntu0.5) over (5.22.1-9ubuntu0.3) ... build 27-Aug-2018 11:14:22 Setting up perl-base (5.22.1-9ubuntu0.5) ... build 27-Aug-2018 11:14:22 (Reading database ... build 27-Aug-2018 11:14:22 (Reading database ... 5% build 27-Aug-2018 11:14:22 (Reading database ... 10% build 27-Aug-2018 11:14:22 (Reading database ... 15% build 27-Aug-2018 11:14:22 (Reading database ... 20% build 27-Aug-2018 11:14:22 (Reading database ... 25% build 27-Aug-2018 11:14:22 (Reading database ... 30% build 27-Aug-2018 11:14:22 (Reading database ... 35% build 27-Aug-2018 11:14:22 (Reading database ... 40% build 27-Aug-2018 11:14:22 (Reading database ... 45% build 27-Aug-2018 11:14:22 (Reading database ... 50% build 27-Aug-2018 11:14:22 (Reading database ... 55% build 27-Aug-2018 11:14:22 (Reading database ... 60% build 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build 27-Aug-2018 11:16:17 Setting up ifupdown (0.8.10ubuntu1.4) ... build 27-Aug-2018 11:16:18 Creating /etc/network/interfaces. build 27-Aug-2018 11:16:18 Setting up libisc-export160 (1:9.10.3.dfsg.P4-8ubuntu1.10) ... build 27-Aug-2018 11:16:18 Setting up libdns-export162 (1:9.10.3.dfsg.P4-8ubuntu1.10) ... build 27-Aug-2018 11:16:18 Setting up isc-dhcp-client (4.3.3-5ubuntu12.10) ... build 27-Aug-2018 11:16:19 Setting up isc-dhcp-common (4.3.3-5ubuntu12.10) ... build 27-Aug-2018 11:16:19 Setting up libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ... build 27-Aug-2018 11:16:19 Setting up libhogweed4:amd64 (3.2-1ubuntu0.16.04.1) ... build 27-Aug-2018 11:16:20 Setting up libidn11:amd64 (1.32-3ubuntu1.2) ... build 27-Aug-2018 11:16:20 Setting up libp11-kit0:amd64 (0.23.2-5~ubuntu16.04.1) ... build 27-Aug-2018 11:16:20 Setting up libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 27-Aug-2018 11:16:20 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 27-Aug-2018 11:16:20 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ... build 27-Aug-2018 11:16:20 Setting up libxtables11:amd64 (1.6.0-2ubuntu3) ... build 27-Aug-2018 11:16:20 Setting up netbase (5.3) ... build 27-Aug-2018 11:16:21 Setting up ucf (3.0036) ... build 27-Aug-2018 11:16:21 debconf: unable to initialize frontend: Dialog build 27-Aug-2018 11:16:21 debconf: (TERM is not set, so the dialog frontend is not usable.) build 27-Aug-2018 11:16:21 debconf: falling back to frontend: Readline build 27-Aug-2018 11:16:21 Setting up libcap-ng0:amd64 (0.7.7-1) ... build 27-Aug-2018 11:16:21 Setting up libdbus-1-3:amd64 (1.10.6-1ubuntu3.3) ... build 27-Aug-2018 11:16:21 Setting up dbus (1.10.6-1ubuntu3.3) ... build 27-Aug-2018 11:16:22 Setting up libgirepository-1.0-1:amd64 (1.46.0-3ubuntu1) ... build 27-Aug-2018 11:16:22 Setting up gir1.2-glib-2.0:amd64 (1.46.0-3ubuntu1) ... build 27-Aug-2018 11:16:22 Setting up iso-codes (3.65-1) ... build 27-Aug-2018 11:16:23 Setting up krb5-locales (1.13.2+dfsg-5ubuntu2) ... build 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up cpp-5 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:50 Setting up cpp (4:5.3.1-1ubuntu1) ... build 27-Aug-2018 11:16:50 Setting up libcc1-0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:50 Setting up libgomp1:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:50 Setting up libitm1:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:50 Setting up libatomic1:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:50 Setting up libasan2:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:50 Setting up liblsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:50 Setting up libtsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:51 Setting up libubsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:51 Setting up libcilkrts5:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:51 Setting up libmpx0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:51 Setting up libquadmath0:amd64 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27-Aug-2018 11:16:53 Setting up dpkg-dev (1.18.4ubuntu1.4) ... build 27-Aug-2018 11:16:53 Setting up build-essential (12.1ubuntu2) ... build 27-Aug-2018 11:16:54 Setting up libfakeroot:amd64 (1.20.2-1ubuntu1) ... build 27-Aug-2018 11:16:54 Setting up fakeroot (1.20.2-1ubuntu1) ... build 27-Aug-2018 11:16:54 update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode build 27-Aug-2018 11:16:54 Setting up fonts-dejavu-core (2.35-1) ... build 27-Aug-2018 11:16:55 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 27-Aug-2018 11:16:57 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:16:57 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:16:57 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 27-Aug-2018 11:16:58 Setting up libarpack2 (3.3.0-1build2) ... build 27-Aug-2018 11:16:58 Setting up libarmadillo6 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up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 27-Aug-2018 11:17:02 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 27-Aug-2018 11:17:02 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 27-Aug-2018 11:17:02 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 27-Aug-2018 11:17:03 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 27-Aug-2018 11:17:03 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 27-Aug-2018 11:17:03 Setting up libpq5:amd64 (9.5.14-0ubuntu0.16.04) ... build 27-Aug-2018 11:17:03 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 27-Aug-2018 11:17:03 Setting up libwebp5:amd64 (0.4.4-1) ... build 27-Aug-2018 11:17:03 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 27-Aug-2018 11:17:03 Setting up libalgorithm-diff-perl (1.19.03-1) ... build 27-Aug-2018 11:17:03 Setting up libalgorithm-diff-xs-perl (0.04-4build1) ... build 27-Aug-2018 11:17:04 Setting up libalgorithm-merge-perl (0.08-3) ... build 27-Aug-2018 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27-Aug-2018 11:17:11 Setting up rename (0.20-4) ... build 27-Aug-2018 11:17:11 update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode build 27-Aug-2018 11:17:11 Setting up proj-bin (4.9.2-2) ... build 27-Aug-2018 11:17:12 Setting up python-scipy (0.17.0-1) ... build 27-Aug-2018 11:17:14 Setting up python3 (3.5.1-3) ... build 27-Aug-2018 11:17:14 running python rtupdate hooks for python3.5... build 27-Aug-2018 11:17:14 running python post-rtupdate hooks for python3.5... build 27-Aug-2018 11:17:14 Setting up lsb-release (9.20160110ubuntu0.2) ... build 27-Aug-2018 11:17:15 Setting up python3-apt (1.1.0~beta1ubuntu0.16.04.2) ... build 27-Aug-2018 11:17:15 Setting up python3-dbus (1.2.0-3) ... build 27-Aug-2018 11:17:15 Setting up python3-gi (3.20.0-0ubuntu1) ... build 27-Aug-2018 11:17:16 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 27-Aug-2018 11:17:16 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:17:16 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:17:17 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:17:18 Setting up python3-pycurl (7.43.0-1ubuntu1) ... build 27-Aug-2018 11:17:18 Setting up python3-software-properties (0.96.20.7) ... build 27-Aug-2018 11:17:18 Setting up software-properties-common (0.96.20.7) ... build 27-Aug-2018 11:17:19 Setting up unattended-upgrades (0.90ubuntu0.9) ... build 27-Aug-2018 11:17:19 debconf: unable to initialize frontend: Dialog build 27-Aug-2018 11:17:19 debconf: (TERM is not set, so the dialog frontend is not usable.) build 27-Aug-2018 11:17:19 debconf: falling back to frontend: Readline build 27-Aug-2018 11:17:19 build 27-Aug-2018 11:17:19 Creating config file /etc/apt/apt.conf.d/20auto-upgrades with new version build 27-Aug-2018 11:17:19 build 27-Aug-2018 11:17:19 Creating config file /etc/apt/apt.conf.d/50unattended-upgrades with new version build 27-Aug-2018 11:17:20 invoke-rc.d: could not determine current runlevel build 27-Aug-2018 11:17:20 invoke-rc.d: policy-rc.d denied execution of start. build 27-Aug-2018 11:17:20 Setting up dh-python (2.20151103ubuntu1.1) ... build 27-Aug-2018 11:17:21 Setting up odbcinst (2.3.1-4.1) ... build 27-Aug-2018 11:17:21 Processing triggers for systemd (229-4ubuntu21.2) ... build 27-Aug-2018 11:17:21 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 27-Aug-2018 11:17:21 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 27-Aug-2018 11:17:21 Processing triggers for dbus (1.10.6-1ubuntu3.3) ... build 27-Aug-2018 11:17:22 Official stable UbuntuGIS packages. build 27-Aug-2018 11:17:22 build 27-Aug-2018 11:17:22 build 27-Aug-2018 11:17:22 More info: https://launchpad.net/~ubuntugis/+archive/ubuntu/ppa build 27-Aug-2018 11:17:23 gpg: keyring `/tmp/tmptsn0rr7b/secring.gpg' created build 27-Aug-2018 11:17:23 gpg: keyring `/tmp/tmptsn0rr7b/pubring.gpg' created build 27-Aug-2018 11:17:23 gpg: requesting key 314DF160 from hkp server keyserver.ubuntu.com build 27-Aug-2018 11:17:23 gpg: /tmp/tmptsn0rr7b/trustdb.gpg: trustdb created build 27-Aug-2018 11:17:23 gpg: key 314DF160: public key "Launchpad ubuntugis-stable" imported build 27-Aug-2018 11:17:23 gpg: Total number processed: 1 build 27-Aug-2018 11:17:23 gpg: imported: 1 (RSA: 1) build 27-Aug-2018 11:17:23 OK build 27-Aug-2018 11:17:24 Collecting pip==9.0.3 build 27-Aug-2018 11:17:24 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 27-Aug-2018 11:17:24 Installing collected packages: pip build 27-Aug-2018 11:17:24 Found existing installation: pip 8.1.1 build 27-Aug-2018 11:17:24 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 27-Aug-2018 11:17:25 Successfully installed pip-9.0.3 build 27-Aug-2018 11:17:25 You are using pip version 9.0.3, however version 18.0 is available. build 27-Aug-2018 11:17:25 You should consider upgrading via the 'pip install --upgrade pip' command. build 27-Aug-2018 11:17:25 Collecting cython>=0.23.4 (from -r /home/clowder/requirements.txt (line 1)) build 27-Aug-2018 11:17:26 Downloading https://files.pythonhosted.org/packages/9c/ae/be506d47f77fd31101a29eb740120f39050423f941cb0a461e4247330a47/Cython-0.28.5-cp27-cp27mu-manylinux1_x86_64.whl (3.3MB) build 27-Aug-2018 11:17:26 Requirement already satisfied: numpy>=1.10.4 in /usr/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 2)) build 27-Aug-2018 11:17:26 Collecting shapely>=1.3.2 (from -r /home/clowder/requirements.txt (line 3)) build 27-Aug-2018 11:17:26 Downloading https://files.pythonhosted.org/packages/81/d1/b8e1b089a8ddd6df74be583d70373eac55c725c6197c115efbd3c3e1509f/Shapely-1.6.4.post2-cp27-cp27mu-manylinux1_x86_64.whl (1.4MB) build 27-Aug-2018 11:17:27 Collecting pygeoprocessing==0.2.2 (from -r /home/clowder/requirements.txt (line 4)) build 27-Aug-2018 11:17:27 Downloading https://files.pythonhosted.org/packages/5a/00/23b0d22a568308d8626b493f8da4780ac29c29d62a065f8795803f64148f/pygeoprocessing-0.2.2.zip (532kB) build 27-Aug-2018 11:17:27 Requirement already satisfied: pika>=0.10.0 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 5)) build 27-Aug-2018 11:17:27 Requirement already satisfied: requests>=2.9.1 in /usr/local/lib/python2.7/dist-packages (from -r /home/clowder/requirements.txt (line 6)) build 27-Aug-2018 11:17:27 Requirement already satisfied: scipy in /usr/lib/python2.7/dist-packages (from pygeoprocessing==0.2.2->-r /home/clowder/requirements.txt (line 4)) build 27-Aug-2018 11:17:27 Requirement already satisfied: gdal in /usr/lib/python2.7/dist-packages (from pygeoprocessing==0.2.2->-r /home/clowder/requirements.txt (line 4)) build 27-Aug-2018 11:17:27 Requirement already satisfied: certifi>=2017.4.17 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 27-Aug-2018 11:17:27 Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 27-Aug-2018 11:17:27 Requirement already satisfied: idna<2.7,>=2.5 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 27-Aug-2018 11:17:27 Requirement already satisfied: urllib3<1.23,>=1.21.1 in /usr/local/lib/python2.7/dist-packages (from requests>=2.9.1->-r /home/clowder/requirements.txt (line 6)) build 27-Aug-2018 11:17:27 Installing collected packages: cython, shapely, pygeoprocessing build 27-Aug-2018 11:17:28 Running setup.py install for pygeoprocessing: started build 27-Aug-2018 11:17:52 Running setup.py install for pygeoprocessing: finished with status 'done' build 27-Aug-2018 11:17:52 Successfully installed cython-0.28.5 pygeoprocessing-0.2.2 shapely-1.6.4.post2 build 27-Aug-2018 11:17:52 You are using pip version 9.0.3, however version 18.0 is available. build 27-Aug-2018 11:17:52 You should consider upgrading via the 'pip install --upgrade pip' command. build 27-Aug-2018 11:18:00 Removing intermediate container 017a0dbfb713 build 27-Aug-2018 11:18:00 ---> a32805784b4a build 27-Aug-2018 11:18:00 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 27-Aug-2018 11:18:01 ---> Running in ff119733e2d4 build 27-Aug-2018 11:18:01 Removing intermediate container ff119733e2d4 build 27-Aug-2018 11:18:01 ---> 187ea9ad2732 build 27-Aug-2018 11:18:01 Step 6/8 : CMD ["extractor"] build 27-Aug-2018 11:18:01 ---> Running in 41d894fe1748 build 27-Aug-2018 11:18:01 Removing intermediate container 41d894fe1748 build 27-Aug-2018 11:18:01 ---> 6ec26d7e367a build 27-Aug-2018 11:18:01 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geotiff.metadata" MAIN_SCRIPT="ncsa.image.geotiff.py" build 27-Aug-2018 11:18:02 ---> Running in b7872e512231 build 27-Aug-2018 11:18:02 Removing intermediate container b7872e512231 build 27-Aug-2018 11:18:02 ---> 553acc6aa62c build 27-Aug-2018 11:18:02 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json /home/clowder/ build 27-Aug-2018 11:18:02 ---> ba3c8d59fd15 build 27-Aug-2018 11:18:02 Successfully built ba3c8d59fd15 build 27-Aug-2018 11:18:02 Successfully tagged 13878:latest build 27-Aug-2018 11:18:03 Untagged: 13878:latest build 27-Aug-2018 11:18:03 Sending build context to Docker daemon 1.351MB build 27-Aug-2018 11:18:03 build 27-Aug-2018 11:18:03 Step 1/8 : FROM clowder/pyclowder:2 build 27-Aug-2018 11:18:03 ---> b27d04debca2 build 27-Aug-2018 11:18:03 Step 2/8 : MAINTAINER Yong Wook Kim build 27-Aug-2018 11:18:03 ---> Using cache build 27-Aug-2018 11:18:03 ---> 36147c4b9cfa build 27-Aug-2018 11:18:03 Step 3/8 : COPY requirements.txt /home/clowder/ build 27-Aug-2018 11:18:03 ---> a713afd660b2 build 27-Aug-2018 11:18:03 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full && pip install --upgrade pip==9.0.3 && pip install --upgrade -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 27-Aug-2018 11:18:03 ---> Running in b16e74f81cc5 build 27-Aug-2018 11:18:04 Get:1 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 27-Aug-2018 11:18:04 Get:2 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 27-Aug-2018 11:18:05 Get:3 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 27-Aug-2018 11:18:05 Get:4 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [87.8 kB] build 27-Aug-2018 11:18:05 Get:5 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 27-Aug-2018 11:18:05 Get:6 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [699 kB] build 27-Aug-2018 11:18:05 Get:7 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 27-Aug-2018 11:18:05 Get:8 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 27-Aug-2018 11:18:05 Get:9 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [463 kB] build 27-Aug-2018 11:18:05 Get:10 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3748 B] build 27-Aug-2018 11:18:05 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 27-Aug-2018 11:18:05 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 27-Aug-2018 11:18:05 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 27-Aug-2018 11:18:06 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 27-Aug-2018 11:18:06 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [274 kB] build 27-Aug-2018 11:18:06 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1084 kB] build 27-Aug-2018 11:18:06 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 27-Aug-2018 11:18:06 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [873 kB] build 27-Aug-2018 11:18:06 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 27-Aug-2018 11:18:06 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7343 B] build 27-Aug-2018 11:18:06 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8086 B] build 27-Aug-2018 11:18:07 Fetched 25.5 MB in 3s (8094 kB/s) build 27-Aug-2018 11:18:08 Reading package lists... build 27-Aug-2018 11:18:09 Reading package lists... build 27-Aug-2018 11:18:09 Building dependency tree... build 27-Aug-2018 11:18:09 Reading state information... build 27-Aug-2018 11:18:09 The following additional packages will be installed: build 27-Aug-2018 11:18:09 fontconfig-config fonts-dejavu-core gcc-5-base krb5-locales libaec0 build 27-Aug-2018 11:18:09 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 27-Aug-2018 11:18:09 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 27-Aug-2018 11:18:09 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 27-Aug-2018 11:18:09 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 27-Aug-2018 11:18:09 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 27-Aug-2018 11:18:09 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 27-Aug-2018 11:18:09 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 27-Aug-2018 11:18:09 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 27-Aug-2018 11:18:09 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 27-Aug-2018 11:18:09 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 27-Aug-2018 11:18:09 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 27-Aug-2018 11:18:09 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 27-Aug-2018 11:18:09 libsasl2-modules-db libspatialite7 libstdc++6 libsuperlu4 libsz2 libtasn1-6 build 27-Aug-2018 11:18:09 libtiff5 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 build 27-Aug-2018 11:18:09 mysql-common odbcinst odbcinst1debian2 proj-bin proj-data python-numpy build 27-Aug-2018 11:18:09 sgml-base ucf xml-core build 27-Aug-2018 11:18:09 Suggested packages: build 27-Aug-2018 11:18:09 gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools build 27-Aug-2018 11:18:09 libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc odbc-postgresql build 27-Aug-2018 11:18:09 tdsodbc unixodbc-bin ogdi-bin poppler-data libsasl2-modules-otp build 27-Aug-2018 11:18:09 libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit build 27-Aug-2018 11:18:09 | libsasl2-modules-gssapi-heimdal p7zip-rar gcc gfortran python-dev build 27-Aug-2018 11:18:09 python-nose python-numpy-dbg python-numpy-doc sgml-base-doc debhelper build 27-Aug-2018 11:18:09 The following NEW packages will be installed: build 27-Aug-2018 11:18:09 file fontconfig-config fonts-dejavu-core gdal-bin krb5-locales libaec0 build 27-Aug-2018 11:18:09 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 27-Aug-2018 11:18:09 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 27-Aug-2018 11:18:09 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 27-Aug-2018 11:18:09 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 27-Aug-2018 11:18:09 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 27-Aug-2018 11:18:09 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 27-Aug-2018 11:18:09 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 27-Aug-2018 11:18:09 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 27-Aug-2018 11:18:09 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 27-Aug-2018 11:18:09 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 27-Aug-2018 11:18:09 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 27-Aug-2018 11:18:09 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 27-Aug-2018 11:18:09 libsasl2-modules-db libspatialite7 libsuperlu4 libsz2 libtasn1-6 libtiff5 build 27-Aug-2018 11:18:09 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 mysql-common build 27-Aug-2018 11:18:09 odbcinst odbcinst1debian2 p7zip-full proj-bin proj-data python-gdal build 27-Aug-2018 11:18:09 python-numpy sgml-base ucf xml-core build 27-Aug-2018 11:18:09 The following packages will be upgraded: build 27-Aug-2018 11:18:09 gcc-5-base libstdc++6 build 27-Aug-2018 11:18:10 2 upgraded, 92 newly installed, 0 to remove and 19 not upgraded. build 27-Aug-2018 11:18:10 Need to get 36.2 MB of archives. build 27-Aug-2018 11:18:10 After this operation, 146 MB of additional disk space will be used. build 27-Aug-2018 11:18:10 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 27-Aug-2018 11:18:10 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 27-Aug-2018 11:18:10 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 27-Aug-2018 11:18:10 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 27-Aug-2018 11:18:10 Get:5 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 27-Aug-2018 11:18:10 Get:6 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 27-Aug-2018 11:18:10 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 27-Aug-2018 11:18:10 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 27-Aug-2018 11:18:10 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 27-Aug-2018 11:18:10 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.1 [216 kB] build 27-Aug-2018 11:18:10 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.1 [21.2 kB] build 27-Aug-2018 11:18:10 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 27-Aug-2018 11:18:10 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 27-Aug-2018 11:18:10 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 27-Aug-2018 11:18:10 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 27-Aug-2018 11:18:10 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 27-Aug-2018 11:18:10 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 27-Aug-2018 11:18:10 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 27-Aug-2018 11:18:10 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 27-Aug-2018 11:18:11 Get:20 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 27-Aug-2018 11:18:11 Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 27-Aug-2018 11:18:11 Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 27-Aug-2018 11:18:11 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 27-Aug-2018 11:18:11 Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 27-Aug-2018 11:18:11 Get:25 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libk5crypto3 amd64 1.13.2+dfsg-5ubuntu2 [81.2 kB] build 27-Aug-2018 11:18:11 Get:26 http://archive.ubuntu.com/ubuntu xenial/main amd64 libkeyutils1 amd64 1.5.9-8ubuntu1 [9904 B] build 27-Aug-2018 11:18:11 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-3 amd64 1.13.2+dfsg-5ubuntu2 [273 kB] build 27-Aug-2018 11:18:11 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi-krb5-2 amd64 1.13.2+dfsg-5ubuntu2 [120 kB] build 27-Aug-2018 11:18:11 Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhcrypto4-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [85.0 kB] build 27-Aug-2018 11:18:11 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimbase1-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [29.3 kB] build 27-Aug-2018 11:18:11 Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwind0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [47.8 kB] build 27-Aug-2018 11:18:11 Get:32 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhx509-5-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [107 kB] build 27-Aug-2018 11:18:11 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 27-Aug-2018 11:18:11 Get:34 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 27-Aug-2018 11:18:11 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 27-Aug-2018 11:18:11 Get:36 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 27-Aug-2018 11:18:11 Get:37 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 27-Aug-2018 11:18:11 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu3.3 [161 kB] build 27-Aug-2018 11:18:11 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d-1ubuntu0.1 [54.4 kB] build 27-Aug-2018 11:18:11 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcurl3-gnutls amd64 7.47.0-1ubuntu2.8 [185 kB] build 27-Aug-2018 11:18:11 Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 27-Aug-2018 11:18:11 Get:42 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules amd64 2.1.26.dfsg1-14build1 [47.5 kB] build 27-Aug-2018 11:18:11 Get:43 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 27-Aug-2018 11:18:11 Get:44 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 27-Aug-2018 11:18:11 Get:45 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 27-Aug-2018 11:18:11 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 27-Aug-2018 11:18:11 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB] build 27-Aug-2018 11:18:11 Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB] build 27-Aug-2018 11:18:11 Get:49 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 27-Aug-2018 11:18:11 Get:50 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 27-Aug-2018 11:18:11 Get:51 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarmadillo6 amd64 1:6.500.5+dfsg-1 [75.2 kB] build 27-Aug-2018 11:18:11 Get:52 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 27-Aug-2018 11:18:11 Get:53 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 27-Aug-2018 11:18:11 Get:54 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libepsilon1 amd64 0.9.2-3ubuntu1 [41.0 kB] build 27-Aug-2018 11:18:11 Get:55 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libfreexl1 amd64 1.0.2-1 [33.6 kB] build 27-Aug-2018 11:18:11 Get:56 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libxerces-c3.1 amd64 3.1.3+debian-1 [842 kB] build 27-Aug-2018 11:18:12 Get:87 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst amd64 2.3.1-4.1 [13.1 kB] build 27-Aug-2018 11:18:12 Get:88 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst1debian2 amd64 2.3.1-4.1 [41.1 kB] build 27-Aug-2018 11:18:12 Get:89 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgdal1i amd64 1.11.3+dfsg-3build2 [4013 kB] build 27-Aug-2018 11:18:12 Get:90 http://archive.ubuntu.com/ubuntu xenial/universe amd64 gdal-bin amd64 1.11.3+dfsg-3build2 [226 kB] build 27-Aug-2018 11:18:12 Get:91 http://archive.ubuntu.com/ubuntu xenial/universe amd64 p7zip-full amd64 9.20.1~dfsg.1-4.2 [919 kB] build 27-Aug-2018 11:18:12 Get:92 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-numpy amd64 1:1.11.0-1ubuntu1 [1763 kB] build 27-Aug-2018 11:18:12 Get:93 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-gdal amd64 1.11.3+dfsg-3build2 [423 kB] build 27-Aug-2018 11:18:12 Get:94 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-bin amd64 4.9.2-2 [31.3 kB] build 27-Aug-2018 11:18:13 debconf: delaying package configuration, since apt-utils is not installed build 27-Aug-2018 11:18:13 Fetched 36.2 MB in 2s (12.4 MB/s) build 27-Aug-2018 11:18:13 Selecting previously unselected package sgml-base. build 27-Aug-2018 11:18:13 (Reading database ... build 27-Aug-2018 11:18:13 (Reading database ... 5% build 27-Aug-2018 11:18:13 (Reading database ... 10% build 27-Aug-2018 11:18:13 (Reading database ... 15% build 27-Aug-2018 11:18:13 (Reading database ... 20% build 27-Aug-2018 11:18:13 (Reading database ... 25% build 27-Aug-2018 11:18:13 (Reading database ... 30% build 27-Aug-2018 11:18:13 (Reading database ... 35% build 27-Aug-2018 11:18:13 (Reading database ... 40% build 27-Aug-2018 11:18:13 (Reading database ... 45% build 27-Aug-2018 11:18:13 (Reading database ... 50% build 27-Aug-2018 11:18:13 (Reading database ... 55% build 27-Aug-2018 11:18:13 (Reading 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27-Aug-2018 11:18:19 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 27-Aug-2018 11:18:19 Setting up libstdc++6:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:18:20 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 27-Aug-2018 11:18:20 Selecting previously unselected package libmagic1:amd64. build 27-Aug-2018 11:18:20 (Reading database ... build 27-Aug-2018 11:18:20 (Reading database ... 5% build 27-Aug-2018 11:18:20 (Reading database ... 10% build 27-Aug-2018 11:18:20 (Reading database ... 15% build 27-Aug-2018 11:18:20 (Reading database ... 20% build 27-Aug-2018 11:18:20 (Reading database ... 25% build 27-Aug-2018 11:18:20 (Reading database ... 30% build 27-Aug-2018 11:18:20 (Reading database ... 35% build 27-Aug-2018 11:18:20 (Reading database ... 40% build 27-Aug-2018 11:18:20 (Reading database ... 45% build 27-Aug-2018 11:18:20 (Reading database ... 50% build 27-Aug-2018 11:18:20 (Reading database ... 55% build 27-Aug-2018 11:18:20 (Reading database 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previously unselected package libp11-kit0:amd64. build 27-Aug-2018 11:18:23 Preparing to unpack .../libp11-kit0_0.23.2-5~ubuntu16.04.1_amd64.deb ... build 27-Aug-2018 11:18:23 Unpacking libp11-kit0:amd64 (0.23.2-5~ubuntu16.04.1) ... build 27-Aug-2018 11:18:23 Selecting previously unselected package libtasn1-6:amd64. build 27-Aug-2018 11:18:23 Preparing to unpack .../libtasn1-6_4.7-3ubuntu0.16.04.3_amd64.deb ... build 27-Aug-2018 11:18:23 Unpacking libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 27-Aug-2018 11:18:23 Selecting previously unselected package libgnutls30:amd64. build 27-Aug-2018 11:18:23 Preparing to unpack .../libgnutls30_3.4.10-4ubuntu1.4_amd64.deb ... build 27-Aug-2018 11:18:24 Unpacking libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 27-Aug-2018 11:18:25 Selecting previously unselected package libpng12-0:amd64. build 27-Aug-2018 11:18:25 Preparing to unpack .../libpng12-0_1.2.54-1ubuntu1.1_amd64.deb ... build 27-Aug-2018 11:18:25 Unpacking libpng12-0:amd64 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libproj9. build 27-Aug-2018 11:19:01 Preparing to unpack .../libproj9_4.9.2-2_amd64.deb ... build 27-Aug-2018 11:19:01 Unpacking libproj9 (4.9.2-2) ... build 27-Aug-2018 11:19:02 Selecting previously unselected package libogdi3.2. build 27-Aug-2018 11:19:02 Preparing to unpack .../libogdi3.2_3.2.0~beta2-7.1build1_amd64.deb ... build 27-Aug-2018 11:19:02 Unpacking libogdi3.2 (3.2.0~beta2-7.1build1) ... build 27-Aug-2018 11:19:02 Selecting previously unselected package libopenjp2-7:amd64. build 27-Aug-2018 11:19:02 Preparing to unpack .../libopenjp2-7_2.1.0-2.1ubuntu0.1_amd64.deb ... build 27-Aug-2018 11:19:02 Unpacking libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 27-Aug-2018 11:19:03 Selecting previously unselected package libfreetype6:amd64. build 27-Aug-2018 11:19:03 Preparing to unpack .../libfreetype6_2.6.1-0.1ubuntu2.3_amd64.deb ... build 27-Aug-2018 11:19:03 Unpacking libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 27-Aug-2018 11:19:04 Selecting previously unselected 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11:19:07 Selecting previously unselected package libspatialite7:amd64. build 27-Aug-2018 11:19:07 Preparing to unpack .../libspatialite7_4.3.0a-5_amd64.deb ... build 27-Aug-2018 11:19:07 Unpacking libspatialite7:amd64 (4.3.0a-5) ... build 27-Aug-2018 11:19:08 Selecting previously unselected package libwebp5:amd64. build 27-Aug-2018 11:19:08 Preparing to unpack .../libwebp5_0.4.4-1_amd64.deb ... build 27-Aug-2018 11:19:08 Unpacking libwebp5:amd64 (0.4.4-1) ... build 27-Aug-2018 11:19:08 Selecting previously unselected package libxerces-c3.1:amd64. build 27-Aug-2018 11:19:08 Preparing to unpack .../libxerces-c3.1_3.1.3+debian-1_amd64.deb ... build 27-Aug-2018 11:19:08 Unpacking libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 27-Aug-2018 11:19:09 Selecting previously unselected package odbcinst. build 27-Aug-2018 11:19:09 Preparing to unpack .../odbcinst_2.3.1-4.1_amd64.deb ... build 27-Aug-2018 11:19:09 Unpacking odbcinst (2.3.1-4.1) ... build 27-Aug-2018 11:19:09 Selecting previously 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27-Aug-2018 11:19:16 Setting up libblas-common (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:19:17 Setting up libblas3 (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:19:17 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 27-Aug-2018 11:19:17 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 27-Aug-2018 11:19:17 Setting up libjbig0:amd64 (2.1-3.1) ... build 27-Aug-2018 11:19:18 Setting up libmagic1:amd64 (1:5.25-2ubuntu1.1) ... build 27-Aug-2018 11:19:18 Setting up file (1:5.25-2ubuntu1.1) ... build 27-Aug-2018 11:19:19 Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ... build 27-Aug-2018 11:19:19 Setting up libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ... build 27-Aug-2018 11:19:19 Setting up libhogweed4:amd64 (3.2-1ubuntu0.16.04.1) ... build 27-Aug-2018 11:19:20 Setting up libidn11:amd64 (1.32-3ubuntu1.2) ... build 27-Aug-2018 11:19:20 Setting up libp11-kit0:amd64 (0.23.2-5~ubuntu16.04.1) ... build 27-Aug-2018 11:19:20 Setting up libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 27-Aug-2018 11:19:20 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 27-Aug-2018 11:19:21 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ... build 27-Aug-2018 11:19:21 Setting up ucf (3.0036) ... build 27-Aug-2018 11:19:21 debconf: unable to initialize frontend: Dialog build 27-Aug-2018 11:19:21 debconf: (TERM is not set, so the dialog frontend is not usable.) build 27-Aug-2018 11:19:21 debconf: falling back to frontend: Readline build 27-Aug-2018 11:19:21 debconf: unable to initialize frontend: Readline build 27-Aug-2018 11:19:21 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) build 27-Aug-2018 11:19:21 debconf: falling back to frontend: Teletype build 27-Aug-2018 11:19:22 Setting up krb5-locales (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:19:22 Setting up libroken18-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:19:23 Setting up libasn1-8-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:19:23 Setting up libkrb5support0:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:19:23 Setting up libk5crypto3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:19:23 Setting up libkeyutils1:amd64 (1.5.9-8ubuntu1) ... build 27-Aug-2018 11:19:24 Setting up libkrb5-3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:19:24 Setting up libgssapi-krb5-2:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:19:24 Setting up libhcrypto4-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:19:24 Setting up libheimbase1-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:19:24 Setting up libwind0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:19:24 Setting up libhx509-5-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:19:24 Setting up libkrb5-26-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:19:25 Setting up libheimntlm0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:19:25 Setting up libgssapi3-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:19:25 Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-14build1) ... build 27-Aug-2018 11:19:25 Setting up libsasl2-2:amd64 (2.1.26.dfsg1-14build1) ... build 27-Aug-2018 11:19:25 Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu3.3) ... build 27-Aug-2018 11:19:25 Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d-1ubuntu0.1) ... build 27-Aug-2018 11:19:26 Setting up libcurl3-gnutls:amd64 (7.47.0-1ubuntu2.8) ... build 27-Aug-2018 11:19:26 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 27-Aug-2018 11:19:26 Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-14build1) ... build 27-Aug-2018 11:19:27 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ... build 27-Aug-2018 11:19:27 Setting up xml-core (0.13+nmu2) ... build 27-Aug-2018 11:19:28 Setting up fonts-dejavu-core (2.35-1) ... build 27-Aug-2018 11:19:28 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 27-Aug-2018 11:19:30 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:19:30 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:19:30 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:19:30 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 27-Aug-2018 11:19:30 Setting up libarpack2 (3.3.0-1build2) ... build 27-Aug-2018 11:19:31 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 27-Aug-2018 11:19:31 Setting up libdap17v5:amd64 (3.15.1-7) ... build 27-Aug-2018 11:19:31 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 27-Aug-2018 11:19:31 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 27-Aug-2018 11:19:31 Setting up libfreexl1:amd64 (1.0.2-1) ... build 27-Aug-2018 11:19:32 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 27-Aug-2018 11:19:32 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 27-Aug-2018 11:19:32 Setting up libgif7:amd64 (5.1.4-0.3~16.04) ... build 27-Aug-2018 11:19:32 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 27-Aug-2018 11:19:32 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 27-Aug-2018 11:19:32 Setting up libaec0:amd64 (0.3.2-1) ... build 27-Aug-2018 11:19:33 Setting up libsz2:amd64 (0.3.2-1) ... build 27-Aug-2018 11:19:33 Setting up libhdf5-10:amd64 (1.8.16+docs-4ubuntu1) ... build 27-Aug-2018 11:19:33 Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.2) ... build 27-Aug-2018 11:19:33 Setting up libminizip1:amd64 (1.1-8) ... build 27-Aug-2018 11:19:33 Setting up liburiparser1:amd64 (0.8.4-1) ... build 27-Aug-2018 11:19:33 Setting up libkmlbase1:amd64 (1.3.0-1) ... build 27-Aug-2018 11:19:33 Setting up libkmldom1:amd64 (1.3.0-1) ... build 27-Aug-2018 11:19:34 Setting up libkmlengine1:amd64 (1.3.0-1) ... build 27-Aug-2018 11:19:34 Setting up mysql-common (5.7.23-0ubuntu0.16.04.1) ... build 27-Aug-2018 11:19:34 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 27-Aug-2018 11:19:34 Setting up libmysqlclient20:amd64 (5.7.23-0ubuntu0.16.04.1) ... build 27-Aug-2018 11:19:34 Setting up libnetcdf11 (1:4.4.0-2) ... build 27-Aug-2018 11:19:34 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 27-Aug-2018 11:19:34 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 27-Aug-2018 11:19:34 Setting up proj-data (4.9.2-2) ... build 27-Aug-2018 11:19:35 Setting up libproj9 (4.9.2-2) ... build 27-Aug-2018 11:19:35 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 27-Aug-2018 11:19:35 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 27-Aug-2018 11:19:35 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 27-Aug-2018 11:19:35 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 27-Aug-2018 11:19:35 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 27-Aug-2018 11:19:35 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 27-Aug-2018 11:19:36 Setting up libpq5:amd64 (9.5.14-0ubuntu0.16.04) ... build 27-Aug-2018 11:19:36 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 27-Aug-2018 11:19:36 Setting up libwebp5:amd64 (0.4.4-1) ... build 27-Aug-2018 11:19:36 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 27-Aug-2018 11:19:37 Setting up p7zip-full (9.20.1~dfsg.1-4.2) ... build 27-Aug-2018 11:19:37 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 27-Aug-2018 11:19:39 Setting up proj-bin (4.9.2-2) ... build 27-Aug-2018 11:19:39 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 27-Aug-2018 11:19:39 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:19:39 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:19:39 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:19:40 Setting up odbcinst (2.3.1-4.1) ... build 27-Aug-2018 11:19:40 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 27-Aug-2018 11:19:41 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 27-Aug-2018 11:19:42 Collecting pip==9.0.3 build 27-Aug-2018 11:19:42 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 27-Aug-2018 11:19:42 Installing collected packages: pip build 27-Aug-2018 11:19:42 Found existing installation: pip 8.1.1 build 27-Aug-2018 11:19:42 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 27-Aug-2018 11:19:43 Successfully installed pip-9.0.3 build 27-Aug-2018 11:19:43 You are using pip version 9.0.3, however version 18.0 is available. build 27-Aug-2018 11:19:43 You should consider upgrading via the 'pip install --upgrade pip' command. build 27-Aug-2018 11:19:43 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 27-Aug-2018 11:19:43 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 27-Aug-2018 11:19:44 Collecting pika==0.10.0 (from -r /home/clowder/requirements.txt (line 2)) build 27-Aug-2018 11:19:44 Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB) build 27-Aug-2018 11:19:44 Collecting requests==2.10.0 (from -r /home/clowder/requirements.txt (line 3)) build 27-Aug-2018 11:19:44 Downloading https://files.pythonhosted.org/packages/99/b4/63d99ba8e189c47d906b43bae18af4396e336f2b1bfec86af31efe2d2cb8/requests-2.10.0-py2.py3-none-any.whl (506kB) build 27-Aug-2018 11:19:44 Collecting wheel==0.24.0 (from -r /home/clowder/requirements.txt (line 4)) build 27-Aug-2018 11:19:44 Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB) build 27-Aug-2018 11:19:44 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 27-Aug-2018 11:19:44 Downloading https://files.pythonhosted.org/packages/fd/ce/aa4a385e3e9fd351737fd2b07edaa56e7a730448465aceda6b35086a0d9b/httplib2-0.11.3.tar.gz (215kB) build 27-Aug-2018 11:19:44 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 27-Aug-2018 11:19:44 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 27-Aug-2018 11:19:45 Installing collected packages: httplib2, gisdata, gsconfig, pika, requests, wheel build 27-Aug-2018 11:19:45 Running setup.py install for httplib2: started build 27-Aug-2018 11:19:45 Running setup.py install for httplib2: finished with status 'done' build 27-Aug-2018 11:19:45 Running setup.py install for gisdata: started build 27-Aug-2018 11:19:45 Running setup.py install for gisdata: finished with status 'done' build 27-Aug-2018 11:19:45 Running setup.py install for gsconfig: started build 27-Aug-2018 11:19:46 Running setup.py install for gsconfig: finished with status 'done' build 27-Aug-2018 11:19:46 Found existing installation: pika 0.11.2 build 27-Aug-2018 11:19:46 Uninstalling pika-0.11.2: build 27-Aug-2018 11:19:48 Successfully uninstalled pika-0.11.2 build 27-Aug-2018 11:19:48 Found existing installation: requests 2.18.4 build 27-Aug-2018 11:19:48 Uninstalling requests-2.18.4: build 27-Aug-2018 11:19:48 Successfully uninstalled requests-2.18.4 build 27-Aug-2018 11:19:49 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.11.3 pika-0.10.0 requests-2.10.0 wheel-0.24.0 build 27-Aug-2018 11:19:49 You are using pip version 9.0.3, however version 18.0 is available. build 27-Aug-2018 11:19:49 You should consider upgrading via the 'pip install --upgrade pip' command. build 27-Aug-2018 11:19:52 Removing intermediate container b16e74f81cc5 build 27-Aug-2018 11:19:52 ---> 5f0ac6c2026c build 27-Aug-2018 11:19:52 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 27-Aug-2018 11:19:52 ---> Running in df3fa87889ee build 27-Aug-2018 11:19:52 Removing intermediate container df3fa87889ee build 27-Aug-2018 11:19:52 ---> e80e48e9931a build 27-Aug-2018 11:19:52 Step 6/8 : CMD ["extractor"] build 27-Aug-2018 11:19:52 ---> Running in 98a22aa50696 build 27-Aug-2018 11:19:53 Removing intermediate container 98a22aa50696 build 27-Aug-2018 11:19:53 ---> 24fd3573accc build 27-Aug-2018 11:19:53 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geotiff.preview" MAIN_SCRIPT="ncsa.geo.tiff.py" GEOSERVER_URL="" GEOSERVER_USERNAME="admin" GEOSERVER_PASSWORD="geoserver" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 27-Aug-2018 11:19:53 ---> Running in 565d2af9c712 build 27-Aug-2018 11:19:53 Removing intermediate container 565d2af9c712 build 27-Aug-2018 11:19:53 ---> 99f736ab9492 build 27-Aug-2018 11:19:53 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json rasterTemplate.xml /home/clowder/ build 27-Aug-2018 11:19:54 ---> 219e229d74b8 build 27-Aug-2018 11:19:54 Successfully built 219e229d74b8 build 27-Aug-2018 11:19:54 Successfully tagged 13878:latest build 27-Aug-2018 11:19:54 Untagged: 13878:latest build 27-Aug-2018 11:19:54 Sending build context to Docker daemon 162.3kB build 27-Aug-2018 11:19:54 build 27-Aug-2018 11:19:54 Step 1/8 : FROM clowder/pyclowder:2 build 27-Aug-2018 11:19:54 ---> b27d04debca2 build 27-Aug-2018 11:19:54 Step 2/8 : MAINTAINER Yong Wook Kim build 27-Aug-2018 11:19:54 ---> Using cache build 27-Aug-2018 11:19:54 ---> 36147c4b9cfa build 27-Aug-2018 11:19:54 Step 3/8 : COPY requirements.txt /home/clowder/ build 27-Aug-2018 11:19:55 ---> 0ebf17e9fef0 build 27-Aug-2018 11:19:55 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full && pip install --upgrade pip==9.0.3 && pip install --upgrade -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 27-Aug-2018 11:19:55 ---> Running in 0e8e8e1eb86c build 27-Aug-2018 11:19:55 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 27-Aug-2018 11:19:55 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 27-Aug-2018 11:19:56 Get:3 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [87.8 kB] build 27-Aug-2018 11:19:56 Get:4 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 27-Aug-2018 11:19:56 Get:5 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [699 kB] build 27-Aug-2018 11:19:56 Get:6 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 27-Aug-2018 11:19:56 Get:7 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 27-Aug-2018 11:19:56 Get:8 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 27-Aug-2018 11:19:56 Get:9 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [463 kB] build 27-Aug-2018 11:19:56 Get:10 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3748 B] build 27-Aug-2018 11:19:57 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 27-Aug-2018 11:19:57 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 27-Aug-2018 11:19:57 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 27-Aug-2018 11:19:57 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 27-Aug-2018 11:19:57 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [274 kB] build 27-Aug-2018 11:19:57 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1084 kB] build 27-Aug-2018 11:19:57 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 27-Aug-2018 11:19:57 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [873 kB] build 27-Aug-2018 11:19:57 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 27-Aug-2018 11:19:57 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7343 B] build 27-Aug-2018 11:19:57 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8086 B] build 27-Aug-2018 11:19:58 Fetched 25.5 MB in 3s (7944 kB/s) build 27-Aug-2018 11:19:59 Reading package lists... build 27-Aug-2018 11:20:00 Reading package lists... build 27-Aug-2018 11:20:00 Building dependency tree... build 27-Aug-2018 11:20:00 Reading state information... build 27-Aug-2018 11:20:00 The following additional packages will be installed: build 27-Aug-2018 11:20:00 fontconfig-config fonts-dejavu-core gcc-5-base krb5-locales libaec0 build 27-Aug-2018 11:20:00 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 27-Aug-2018 11:20:00 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 27-Aug-2018 11:20:00 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 27-Aug-2018 11:20:00 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 27-Aug-2018 11:20:00 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 27-Aug-2018 11:20:00 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 27-Aug-2018 11:20:00 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 27-Aug-2018 11:20:00 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 27-Aug-2018 11:20:00 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 27-Aug-2018 11:20:00 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 27-Aug-2018 11:20:00 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 27-Aug-2018 11:20:00 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 27-Aug-2018 11:20:00 libsasl2-modules-db libspatialite7 libstdc++6 libsuperlu4 libsz2 libtasn1-6 build 27-Aug-2018 11:20:00 libtiff5 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 build 27-Aug-2018 11:20:00 mysql-common odbcinst odbcinst1debian2 proj-bin proj-data python-numpy build 27-Aug-2018 11:20:00 sgml-base ucf xml-core build 27-Aug-2018 11:20:00 Suggested packages: build 27-Aug-2018 11:20:00 gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools build 27-Aug-2018 11:20:00 libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc odbc-postgresql build 27-Aug-2018 11:20:00 tdsodbc unixodbc-bin ogdi-bin poppler-data libsasl2-modules-otp build 27-Aug-2018 11:20:00 libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit build 27-Aug-2018 11:20:00 | libsasl2-modules-gssapi-heimdal p7zip-rar gcc gfortran python-dev build 27-Aug-2018 11:20:00 python-nose python-numpy-dbg python-numpy-doc sgml-base-doc debhelper build 27-Aug-2018 11:20:00 The following NEW packages will be installed: build 27-Aug-2018 11:20:00 file fontconfig-config fonts-dejavu-core gdal-bin krb5-locales libaec0 build 27-Aug-2018 11:20:00 libarmadillo6 libarpack2 libasn1-8-heimdal libblas-common libblas3 build 27-Aug-2018 11:20:00 libcurl3-gnutls libdap17v5 libdapclient6v5 libepsilon1 libfontconfig1 build 27-Aug-2018 11:20:00 libfreetype6 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5 libgfortran3 build 27-Aug-2018 11:20:00 libgif7 libgmp10 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal build 27-Aug-2018 11:20:00 libhcrypto4-heimdal libhdf4-0-alt libhdf5-10 libheimbase1-heimdal build 27-Aug-2018 11:20:00 libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libicu55 libidn11 build 27-Aug-2018 11:20:00 libjasper1 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 build 27-Aug-2018 11:20:00 libkmlbase1 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 build 27-Aug-2018 11:20:00 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 build 27-Aug-2018 11:20:00 libminizip1 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 build 27-Aug-2018 11:20:00 libopenjp2-7 libp11-kit0 libpng12-0 libpoppler58 libpq5 libproj9 build 27-Aug-2018 11:20:00 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 27-Aug-2018 11:20:00 libsasl2-modules-db libspatialite7 libsuperlu4 libsz2 libtasn1-6 libtiff5 build 27-Aug-2018 11:20:00 liburiparser1 libwebp5 libwind0-heimdal libxerces-c3.1 libxml2 mysql-common build 27-Aug-2018 11:20:00 odbcinst odbcinst1debian2 p7zip-full proj-bin proj-data python-gdal build 27-Aug-2018 11:20:00 python-numpy sgml-base ucf xml-core build 27-Aug-2018 11:20:00 The following packages will be upgraded: build 27-Aug-2018 11:20:00 gcc-5-base libstdc++6 build 27-Aug-2018 11:20:01 2 upgraded, 92 newly installed, 0 to remove and 19 not upgraded. build 27-Aug-2018 11:20:01 Need to get 36.2 MB of archives. build 27-Aug-2018 11:20:01 After this operation, 146 MB of additional disk space will be used. build 27-Aug-2018 11:20:01 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 27-Aug-2018 11:20:01 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 27-Aug-2018 11:20:01 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 27-Aug-2018 11:20:01 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 27-Aug-2018 11:20:01 Get:5 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 27-Aug-2018 11:20:01 Get:6 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 27-Aug-2018 11:20:01 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 27-Aug-2018 11:20:01 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 27-Aug-2018 11:20:01 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 27-Aug-2018 11:20:02 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.1 [216 kB] build 27-Aug-2018 11:20:02 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.1 [21.2 kB] build 27-Aug-2018 11:20:02 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 27-Aug-2018 11:20:02 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 27-Aug-2018 11:20:02 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 27-Aug-2018 11:20:02 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 27-Aug-2018 11:20:02 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 27-Aug-2018 11:20:02 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 27-Aug-2018 11:20:02 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 27-Aug-2018 11:20:02 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 27-Aug-2018 11:20:02 Get:20 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 27-Aug-2018 11:20:02 Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 27-Aug-2018 11:20:02 Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 27-Aug-2018 11:20:02 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 27-Aug-2018 11:20:02 Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 27-Aug-2018 11:20:02 Get:25 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libk5crypto3 amd64 1.13.2+dfsg-5ubuntu2 [81.2 kB] build 27-Aug-2018 11:20:02 Get:26 http://archive.ubuntu.com/ubuntu xenial/main amd64 libkeyutils1 amd64 1.5.9-8ubuntu1 [9904 B] build 27-Aug-2018 11:20:02 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-3 amd64 1.13.2+dfsg-5ubuntu2 [273 kB] build 27-Aug-2018 11:20:02 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi-krb5-2 amd64 1.13.2+dfsg-5ubuntu2 [120 kB] build 27-Aug-2018 11:20:02 Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhcrypto4-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [85.0 kB] build 27-Aug-2018 11:20:02 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimbase1-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [29.3 kB] build 27-Aug-2018 11:20:02 Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libwind0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [47.8 kB] build 27-Aug-2018 11:20:02 Get:32 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhx509-5-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [107 kB] build 27-Aug-2018 11:20:02 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 27-Aug-2018 11:20:02 Get:34 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 27-Aug-2018 11:20:02 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 27-Aug-2018 11:20:02 Get:36 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 27-Aug-2018 11:20:02 Get:37 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 27-Aug-2018 11:20:02 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu3.3 [161 kB] build 27-Aug-2018 11:20:02 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d-1ubuntu0.1 [54.4 kB] build 27-Aug-2018 11:20:02 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcurl3-gnutls amd64 7.47.0-1ubuntu2.8 [185 kB] build 27-Aug-2018 11:20:02 Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 27-Aug-2018 11:20:02 Get:42 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules amd64 2.1.26.dfsg1-14build1 [47.5 kB] build 27-Aug-2018 11:20:02 Get:43 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 27-Aug-2018 11:20:02 Get:44 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 27-Aug-2018 11:20:02 Get:45 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 27-Aug-2018 11:20:02 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 27-Aug-2018 11:20:02 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB] build 27-Aug-2018 11:20:02 Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB] build 27-Aug-2018 11:20:02 Get:49 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] build 27-Aug-2018 11:20:02 Get:50 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarpack2 amd64 3.3.0-1build2 [88.2 kB] build 27-Aug-2018 11:20:02 Get:51 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libarmadillo6 amd64 1:6.500.5+dfsg-1 [75.2 kB] build 27-Aug-2018 11:20:02 Get:52 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdap17v5 amd64 3.15.1-7 [412 kB] build 27-Aug-2018 11:20:02 Get:53 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libdapclient6v5 amd64 3.15.1-7 [85.3 kB] build 27-Aug-2018 11:20:02 Get:54 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libepsilon1 amd64 0.9.2-3ubuntu1 [41.0 kB] build 27-Aug-2018 11:20:02 Get:55 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libfreexl1 amd64 1.0.2-1 [33.6 kB] build 27-Aug-2018 11:20:02 Get:56 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-3.5.0 amd64 3.5.0-1ubuntu2 [477 kB] build 27-Aug-2018 11:20:03 Get:57 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgeos-c1v5 amd64 3.5.0-1ubuntu2 [52.4 kB] build 27-Aug-2018 11:20:03 Get:58 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgif7 amd64 5.1.4-0.3~16.04 [30.5 kB] build 27-Aug-2018 11:20:03 Get:59 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] build 27-Aug-2018 11:20:03 Get:60 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf4-0-alt amd64 4.2.10-3.2 [264 kB] build 27-Aug-2018 11:20:03 Get:61 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libaec0 amd64 0.3.2-1 [18.0 kB] build 27-Aug-2018 11:20:03 Get:62 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsz2 amd64 0.3.2-1 [5048 B] build 27-Aug-2018 11:20:03 Get:63 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libhdf5-10 amd64 1.8.16+docs-4ubuntu1 [995 kB] build 27-Aug-2018 11:20:03 Get:64 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjasper1 amd64 1.900.1-debian1-2.4ubuntu1.2 [131 kB] build 27-Aug-2018 11:20:03 Get:65 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libminizip1 amd64 1.1-8 [20.3 kB] build 27-Aug-2018 11:20:03 Get:66 http://archive.ubuntu.com/ubuntu xenial/universe amd64 liburiparser1 amd64 0.8.4-1 [38.0 kB] build 27-Aug-2018 11:20:03 Get:67 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlbase1 amd64 1.3.0-1 [43.9 kB] build 27-Aug-2018 11:20:03 Get:68 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmldom1 amd64 1.3.0-1 [175 kB] build 27-Aug-2018 11:20:03 Get:69 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libkmlengine1 amd64 1.3.0-1 [77.1 kB] build 27-Aug-2018 11:20:03 Get:70 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 mysql-common all 5.7.23-0ubuntu0.16.04.1 [15.4 kB] build 27-Aug-2018 11:20:03 Get:71 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmysqlclient20 amd64 5.7.23-0ubuntu0.16.04.1 [812 kB] build 27-Aug-2018 11:20:03 Get:72 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libnetcdf11 amd64 1:4.4.0-2 [286 kB] build 27-Aug-2018 11:20:03 Get:73 http://archive.ubuntu.com/ubuntu xenial/main amd64 libltdl7 amd64 2.4.6-0.1 [38.3 kB] build 27-Aug-2018 11:20:03 Get:74 http://archive.ubuntu.com/ubuntu xenial/main amd64 libodbc1 amd64 2.3.1-4.1 [180 kB] build 27-Aug-2018 11:20:03 Get:75 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-data all 4.9.2-2 [4004 kB] build 27-Aug-2018 11:20:03 Get:76 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libproj9 amd64 4.9.2-2 [143 kB] build 27-Aug-2018 11:20:03 Get:77 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libogdi3.2 amd64 3.2.0~beta2-7.1build1 [212 kB] build 27-Aug-2018 11:20:03 Get:78 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 libopenjp2-7 amd64 2.1.0-2.1ubuntu0.1 [103 kB] build 27-Aug-2018 11:20:03 Get:79 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfreetype6 amd64 2.6.1-0.1ubuntu2.3 [316 kB] build 27-Aug-2018 11:20:03 Get:80 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libfontconfig1 amd64 2.11.94-0ubuntu1.1 [131 kB] build 27-Aug-2018 11:20:03 Get:81 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtiff5 amd64 4.0.6-1ubuntu0.4 [148 kB] build 27-Aug-2018 11:20:03 Get:82 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpoppler58 amd64 0.41.0-0ubuntu1.7 [758 kB] build 27-Aug-2018 11:20:03 Get:83 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpq5 amd64 9.5.14-0ubuntu0.16.04 [78.8 kB] build 27-Aug-2018 11:20:03 Get:84 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libspatialite7 amd64 4.3.0a-5 [1222 kB] build 27-Aug-2018 11:20:03 Get:85 http://archive.ubuntu.com/ubuntu xenial/main amd64 libwebp5 amd64 0.4.4-1 [165 kB] build 27-Aug-2018 11:20:03 Get:86 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libxerces-c3.1 amd64 3.1.3+debian-1 [842 kB] build 27-Aug-2018 11:20:03 Get:87 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst amd64 2.3.1-4.1 [13.1 kB] build 27-Aug-2018 11:20:03 Get:88 http://archive.ubuntu.com/ubuntu xenial/main amd64 odbcinst1debian2 amd64 2.3.1-4.1 [41.1 kB] build 27-Aug-2018 11:20:03 Get:89 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libgdal1i amd64 1.11.3+dfsg-3build2 [4013 kB] build 27-Aug-2018 11:20:03 Get:90 http://archive.ubuntu.com/ubuntu xenial/universe amd64 gdal-bin amd64 1.11.3+dfsg-3build2 [226 kB] build 27-Aug-2018 11:20:03 Get:91 http://archive.ubuntu.com/ubuntu xenial/universe amd64 p7zip-full amd64 9.20.1~dfsg.1-4.2 [919 kB] build 27-Aug-2018 11:20:03 Get:92 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-numpy amd64 1:1.11.0-1ubuntu1 [1763 kB] build 27-Aug-2018 11:20:03 Get:93 http://archive.ubuntu.com/ubuntu xenial/universe amd64 python-gdal amd64 1.11.3+dfsg-3build2 [423 kB] build 27-Aug-2018 11:20:03 Get:94 http://archive.ubuntu.com/ubuntu xenial/universe amd64 proj-bin amd64 4.9.2-2 [31.3 kB] build 27-Aug-2018 11:20:04 debconf: delaying package configuration, since apt-utils is not installed build 27-Aug-2018 11:20:04 Fetched 36.2 MB in 2s (13.8 MB/s) build 27-Aug-2018 11:20:04 Selecting previously unselected package sgml-base. build 27-Aug-2018 11:20:04 (Reading database ... build 27-Aug-2018 11:20:04 (Reading database ... 5% build 27-Aug-2018 11:20:04 (Reading database ... 10% build 27-Aug-2018 11:20:04 (Reading database ... 15% build 27-Aug-2018 11:20:04 (Reading database ... 20% build 27-Aug-2018 11:20:04 (Reading database ... 25% build 27-Aug-2018 11:20:04 (Reading database ... 30% build 27-Aug-2018 11:20:04 (Reading database ... 35% build 27-Aug-2018 11:20:04 (Reading database ... 40% build 27-Aug-2018 11:20:04 (Reading database ... 45% build 27-Aug-2018 11:20:04 (Reading database ... 50% build 27-Aug-2018 11:20:04 (Reading database ... 55% build 27-Aug-2018 11:20:04 (Reading database ... 60% build 27-Aug-2018 11:20:04 (Reading database ... 65% build 27-Aug-2018 11:20:04 (Reading database ... 70% build 27-Aug-2018 11:20:04 (Reading database ... 75% build 27-Aug-2018 11:20:04 (Reading database ... 80% build 27-Aug-2018 11:20:04 (Reading database ... 85% build 27-Aug-2018 11:20:04 (Reading database ... 90% build 27-Aug-2018 11:20:04 (Reading database ... 95% build 27-Aug-2018 11:20:04 (Reading database ... 100% build 27-Aug-2018 11:20:04 (Reading database ... 6036 files and directories currently installed.) build 27-Aug-2018 11:20:04 Preparing to unpack .../sgml-base_1.26+nmu4ubuntu1_all.deb ... build 27-Aug-2018 11:20:04 Unpacking sgml-base (1.26+nmu4ubuntu1) ... build 27-Aug-2018 11:20:04 Selecting previously unselected package libjpeg-turbo8:amd64. build 27-Aug-2018 11:20:04 Preparing to unpack .../libjpeg-turbo8_1.4.2-0ubuntu3.1_amd64.deb ... build 27-Aug-2018 11:20:04 Unpacking libjpeg-turbo8:amd64 (1.4.2-0ubuntu3.1) ... build 27-Aug-2018 11:20:05 Selecting previously unselected package liblcms2-2:amd64. build 27-Aug-2018 11:20:05 Preparing to unpack .../liblcms2-2_2.6-3ubuntu2_amd64.deb ... build 27-Aug-2018 11:20:05 Unpacking liblcms2-2:amd64 (2.6-3ubuntu2) ... build 27-Aug-2018 11:20:06 Selecting previously unselected package libblas-common. build 27-Aug-2018 11:20:06 Preparing to unpack .../libblas-common_3.6.0-2ubuntu2_amd64.deb ... build 27-Aug-2018 11:20:06 Unpacking libblas-common (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:20:06 Selecting previously unselected package libblas3. build 27-Aug-2018 11:20:06 Preparing to unpack .../libblas3_3.6.0-2ubuntu2_amd64.deb ... build 27-Aug-2018 11:20:06 Unpacking libblas3 (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:20:06 Selecting previously unselected package libsuperlu4:amd64. build 27-Aug-2018 11:20:06 Preparing to unpack .../libsuperlu4_4.3+dfsg-3_amd64.deb ... build 27-Aug-2018 11:20:06 Unpacking libsuperlu4:amd64 (4.3+dfsg-3) ... build 27-Aug-2018 11:20:07 Selecting previously unselected package libjbig0:amd64. build 27-Aug-2018 11:20:07 Preparing to unpack .../libjbig0_2.1-3.1_amd64.deb ... build 27-Aug-2018 11:20:07 Unpacking libjbig0:amd64 (2.1-3.1) ... build 27-Aug-2018 11:20:07 Preparing to unpack .../gcc-5-base_5.4.0-6ubuntu1~16.04.10_amd64.deb ... build 27-Aug-2018 11:20:07 Unpacking gcc-5-base:amd64 (5.4.0-6ubuntu1~16.04.10) over (5.4.0-6ubuntu1~16.04.9) ... build 27-Aug-2018 11:20:07 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 27-Aug-2018 11:20:08 Setting up gcc-5-base:amd64 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package libpoppler58:amd64. build 27-Aug-2018 11:20:52 Preparing to unpack .../libpoppler58_0.41.0-0ubuntu1.7_amd64.deb ... build 27-Aug-2018 11:20:52 Unpacking libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 27-Aug-2018 11:20:52 Selecting previously unselected package libpq5:amd64. build 27-Aug-2018 11:20:52 Preparing to unpack .../libpq5_9.5.14-0ubuntu0.16.04_amd64.deb ... build 27-Aug-2018 11:20:52 Unpacking libpq5:amd64 (9.5.14-0ubuntu0.16.04) ... build 27-Aug-2018 11:20:52 Selecting previously unselected package libspatialite7:amd64. build 27-Aug-2018 11:20:52 Preparing to unpack .../libspatialite7_4.3.0a-5_amd64.deb ... build 27-Aug-2018 11:20:52 Unpacking libspatialite7:amd64 (4.3.0a-5) ... build 27-Aug-2018 11:20:53 Selecting previously unselected package libwebp5:amd64. build 27-Aug-2018 11:20:53 Preparing to unpack .../libwebp5_0.4.4-1_amd64.deb ... build 27-Aug-2018 11:20:53 Unpacking libwebp5:amd64 (0.4.4-1) ... build 27-Aug-2018 11:20:53 Selecting previously unselected package libxerces-c3.1:amd64. build 27-Aug-2018 11:20:53 Preparing to unpack .../libxerces-c3.1_3.1.3+debian-1_amd64.deb ... build 27-Aug-2018 11:20:54 Unpacking libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 27-Aug-2018 11:20:54 Selecting previously unselected package odbcinst. build 27-Aug-2018 11:20:54 Preparing to unpack .../odbcinst_2.3.1-4.1_amd64.deb ... build 27-Aug-2018 11:20:54 Unpacking odbcinst (2.3.1-4.1) ... build 27-Aug-2018 11:20:54 Selecting previously unselected package odbcinst1debian2:amd64. build 27-Aug-2018 11:20:54 Preparing to unpack .../odbcinst1debian2_2.3.1-4.1_amd64.deb ... build 27-Aug-2018 11:20:55 Unpacking odbcinst1debian2:amd64 (2.3.1-4.1) ... build 27-Aug-2018 11:20:55 Selecting previously unselected package libgdal1i. build 27-Aug-2018 11:20:55 Preparing to unpack .../libgdal1i_1.11.3+dfsg-3build2_amd64.deb ... build 27-Aug-2018 11:20:55 Unpacking libgdal1i (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:20:56 Selecting previously unselected package gdal-bin. build 27-Aug-2018 11:20:56 Preparing to unpack .../gdal-bin_1.11.3+dfsg-3build2_amd64.deb ... build 27-Aug-2018 11:20:56 Unpacking gdal-bin (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:20:56 Selecting previously unselected package p7zip-full. build 27-Aug-2018 11:20:56 Preparing to unpack .../p7zip-full_9.20.1~dfsg.1-4.2_amd64.deb ... build 27-Aug-2018 11:20:56 Unpacking p7zip-full (9.20.1~dfsg.1-4.2) ... build 27-Aug-2018 11:20:57 Selecting previously unselected package python-numpy. build 27-Aug-2018 11:20:57 Preparing to unpack .../python-numpy_1%3a1.11.0-1ubuntu1_amd64.deb ... build 27-Aug-2018 11:20:57 Unpacking python-numpy (1:1.11.0-1ubuntu1) ... build 27-Aug-2018 11:20:57 Selecting previously unselected package python-gdal. build 27-Aug-2018 11:20:57 Preparing to unpack .../python-gdal_1.11.3+dfsg-3build2_amd64.deb ... build 27-Aug-2018 11:20:57 Unpacking python-gdal (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:20:58 Selecting previously unselected package proj-bin. build 27-Aug-2018 11:20:58 Preparing to unpack .../proj-bin_4.9.2-2_amd64.deb ... build 27-Aug-2018 11:20:58 Unpacking proj-bin (4.9.2-2) ... build 27-Aug-2018 11:20:58 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 27-Aug-2018 11:20:58 Setting up sgml-base (1.26+nmu4ubuntu1) ... build 27-Aug-2018 11:20:59 Setting up libjpeg-turbo8:amd64 (1.4.2-0ubuntu3.1) ... build 27-Aug-2018 11:20:59 Setting up liblcms2-2:amd64 (2.6-3ubuntu2) ... build 27-Aug-2018 11:20:59 Setting up libblas-common (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:20:59 Setting up libblas3 (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:20:59 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 27-Aug-2018 11:20:59 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 27-Aug-2018 11:20:59 Setting up libjbig0:amd64 (2.1-3.1) ... build 27-Aug-2018 11:21:00 Setting up libmagic1:amd64 (1:5.25-2ubuntu1.1) ... build 27-Aug-2018 11:21:00 Setting up file (1:5.25-2ubuntu1.1) ... build 27-Aug-2018 11:21:00 Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ... build 27-Aug-2018 11:21:00 Setting up libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ... build 27-Aug-2018 11:21:00 Setting up libhogweed4:amd64 (3.2-1ubuntu0.16.04.1) ... build 27-Aug-2018 11:21:01 Setting up libidn11:amd64 (1.32-3ubuntu1.2) ... build 27-Aug-2018 11:21:01 Setting up libp11-kit0:amd64 (0.23.2-5~ubuntu16.04.1) ... build 27-Aug-2018 11:21:01 Setting up libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 27-Aug-2018 11:21:01 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 27-Aug-2018 11:21:01 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ... build 27-Aug-2018 11:21:01 Setting up ucf (3.0036) ... build 27-Aug-2018 11:21:01 debconf: unable to initialize frontend: Dialog build 27-Aug-2018 11:21:01 debconf: (TERM is not set, so the dialog frontend is not usable.) build 27-Aug-2018 11:21:01 debconf: falling back to frontend: Readline build 27-Aug-2018 11:21:01 debconf: unable to initialize frontend: Readline build 27-Aug-2018 11:21:01 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) build 27-Aug-2018 11:21:01 debconf: falling back to frontend: Teletype build 27-Aug-2018 11:21:02 Setting up krb5-locales (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:21:02 Setting up libroken18-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:21:02 Setting up libasn1-8-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:21:02 Setting up libkrb5support0:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:21:02 Setting up libk5crypto3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:21:02 Setting up libkeyutils1:amd64 (1.5.9-8ubuntu1) ... build 27-Aug-2018 11:21:02 Setting up libkrb5-3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:21:02 Setting up libgssapi-krb5-2:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:21:03 Setting up libhcrypto4-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:21:03 Setting up libheimbase1-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:21:03 Setting up libwind0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:21:03 Setting up libhx509-5-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:21:04 Setting up libkrb5-26-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:21:04 Setting up libheimntlm0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:21:04 Setting up libgssapi3-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:21:04 Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-14build1) ... build 27-Aug-2018 11:21:04 Setting up libsasl2-2:amd64 (2.1.26.dfsg1-14build1) ... build 27-Aug-2018 11:21:04 Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu3.3) ... build 27-Aug-2018 11:21:05 Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d-1ubuntu0.1) ... build 27-Aug-2018 11:21:05 Setting up libcurl3-gnutls:amd64 (7.47.0-1ubuntu2.8) ... build 27-Aug-2018 11:21:05 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 27-Aug-2018 11:21:05 Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-14build1) ... build 27-Aug-2018 11:21:05 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ... build 27-Aug-2018 11:21:05 Setting up xml-core (0.13+nmu2) ... build 27-Aug-2018 11:21:06 Setting up fonts-dejavu-core (2.35-1) ... build 27-Aug-2018 11:21:07 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 27-Aug-2018 11:21:10 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:21:10 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:21:11 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:21:11 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 27-Aug-2018 11:21:11 Setting up libarpack2 (3.3.0-1build2) ... build 27-Aug-2018 11:21:11 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 27-Aug-2018 11:21:11 Setting up libdap17v5:amd64 (3.15.1-7) ... build 27-Aug-2018 11:21:11 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 27-Aug-2018 11:21:11 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 27-Aug-2018 11:21:11 Setting up libfreexl1:amd64 (1.0.2-1) ... build 27-Aug-2018 11:21:12 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 27-Aug-2018 11:21:12 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 27-Aug-2018 11:21:12 Setting up libgif7:amd64 (5.1.4-0.3~16.04) ... build 27-Aug-2018 11:21:12 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 27-Aug-2018 11:21:12 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 27-Aug-2018 11:21:12 Setting up libaec0:amd64 (0.3.2-1) ... build 27-Aug-2018 11:21:12 Setting up libsz2:amd64 (0.3.2-1) ... build 27-Aug-2018 11:21:12 Setting up libhdf5-10:amd64 (1.8.16+docs-4ubuntu1) ... build 27-Aug-2018 11:21:13 Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.2) ... build 27-Aug-2018 11:21:13 Setting up libminizip1:amd64 (1.1-8) ... build 27-Aug-2018 11:21:13 Setting up liburiparser1:amd64 (0.8.4-1) ... build 27-Aug-2018 11:21:13 Setting up libkmlbase1:amd64 (1.3.0-1) ... build 27-Aug-2018 11:21:13 Setting up libkmldom1:amd64 (1.3.0-1) ... build 27-Aug-2018 11:21:13 Setting up libkmlengine1:amd64 (1.3.0-1) ... build 27-Aug-2018 11:21:14 Setting up mysql-common (5.7.23-0ubuntu0.16.04.1) ... build 27-Aug-2018 11:21:14 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 27-Aug-2018 11:21:14 Setting up libmysqlclient20:amd64 (5.7.23-0ubuntu0.16.04.1) ... build 27-Aug-2018 11:21:14 Setting up libnetcdf11 (1:4.4.0-2) ... build 27-Aug-2018 11:21:14 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 27-Aug-2018 11:21:15 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 27-Aug-2018 11:21:15 Setting up proj-data (4.9.2-2) ... build 27-Aug-2018 11:21:16 Setting up libproj9 (4.9.2-2) ... build 27-Aug-2018 11:21:16 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 27-Aug-2018 11:21:16 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 27-Aug-2018 11:21:16 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 27-Aug-2018 11:21:16 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 27-Aug-2018 11:21:16 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 27-Aug-2018 11:21:17 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 27-Aug-2018 11:21:17 Setting up libpq5:amd64 (9.5.14-0ubuntu0.16.04) ... build 27-Aug-2018 11:21:17 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 27-Aug-2018 11:21:18 Setting up libwebp5:amd64 (0.4.4-1) ... build 27-Aug-2018 11:21:18 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 27-Aug-2018 11:21:18 Setting up p7zip-full (9.20.1~dfsg.1-4.2) ... build 27-Aug-2018 11:21:18 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 27-Aug-2018 11:21:20 Setting up proj-bin (4.9.2-2) ... build 27-Aug-2018 11:21:20 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 27-Aug-2018 11:21:20 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:21:20 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:21:20 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:21:21 Setting up odbcinst (2.3.1-4.1) ... build 27-Aug-2018 11:21:22 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 27-Aug-2018 11:21:22 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 27-Aug-2018 11:21:23 Collecting pip==9.0.3 build 27-Aug-2018 11:21:23 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 27-Aug-2018 11:21:23 Installing collected packages: pip build 27-Aug-2018 11:21:23 Found existing installation: pip 8.1.1 build 27-Aug-2018 11:21:23 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 27-Aug-2018 11:21:24 Successfully installed pip-9.0.3 build 27-Aug-2018 11:21:24 You are using pip version 9.0.3, however version 18.0 is available. build 27-Aug-2018 11:21:24 You should consider upgrading via the 'pip install --upgrade pip' command. build 27-Aug-2018 11:21:24 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 27-Aug-2018 11:21:24 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 27-Aug-2018 11:21:25 Collecting pika==0.10.0 (from -r /home/clowder/requirements.txt (line 2)) build 27-Aug-2018 11:21:25 Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB) build 27-Aug-2018 11:21:25 Collecting requests==2.10.0 (from -r /home/clowder/requirements.txt (line 3)) build 27-Aug-2018 11:21:25 Downloading https://files.pythonhosted.org/packages/99/b4/63d99ba8e189c47d906b43bae18af4396e336f2b1bfec86af31efe2d2cb8/requests-2.10.0-py2.py3-none-any.whl (506kB) build 27-Aug-2018 11:21:25 Collecting wheel==0.24.0 (from -r /home/clowder/requirements.txt (line 4)) build 27-Aug-2018 11:21:25 Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB) build 27-Aug-2018 11:21:25 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 27-Aug-2018 11:21:25 Downloading https://files.pythonhosted.org/packages/fd/ce/aa4a385e3e9fd351737fd2b07edaa56e7a730448465aceda6b35086a0d9b/httplib2-0.11.3.tar.gz (215kB) build 27-Aug-2018 11:21:25 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 27-Aug-2018 11:21:26 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 27-Aug-2018 11:21:26 Installing collected packages: httplib2, gisdata, gsconfig, pika, requests, wheel build 27-Aug-2018 11:21:26 Running setup.py install for httplib2: started build 27-Aug-2018 11:21:26 Running setup.py install for httplib2: finished with status 'done' build 27-Aug-2018 11:21:26 Running setup.py install for gisdata: started build 27-Aug-2018 11:21:27 Running setup.py install for gisdata: finished with status 'done' build 27-Aug-2018 11:21:27 Running setup.py install for gsconfig: started build 27-Aug-2018 11:21:27 Running setup.py install for gsconfig: finished with status 'done' build 27-Aug-2018 11:21:27 Found existing installation: pika 0.11.2 build 27-Aug-2018 11:21:27 Uninstalling pika-0.11.2: build 27-Aug-2018 11:21:29 Successfully uninstalled pika-0.11.2 build 27-Aug-2018 11:21:29 Found existing installation: requests 2.18.4 build 27-Aug-2018 11:21:29 Uninstalling requests-2.18.4: build 27-Aug-2018 11:21:30 Successfully uninstalled requests-2.18.4 build 27-Aug-2018 11:21:30 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.11.3 pika-0.10.0 requests-2.10.0 wheel-0.24.0 build 27-Aug-2018 11:21:30 You are using pip version 9.0.3, however version 18.0 is available. build 27-Aug-2018 11:21:30 You should consider upgrading via the 'pip install --upgrade pip' command. build 27-Aug-2018 11:21:33 Removing intermediate container 0e8e8e1eb86c build 27-Aug-2018 11:21:33 ---> 6411c3f5d7ab build 27-Aug-2018 11:21:33 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 27-Aug-2018 11:21:33 ---> Running in 421ae4315074 build 27-Aug-2018 11:21:34 Removing intermediate container 421ae4315074 build 27-Aug-2018 11:21:34 ---> 465f9c558c13 build 27-Aug-2018 11:21:34 Step 6/8 : CMD ["extractor"] build 27-Aug-2018 11:21:34 ---> Running in 2a46a32d11a5 build 27-Aug-2018 11:21:34 Removing intermediate container 2a46a32d11a5 build 27-Aug-2018 11:21:34 ---> e75ebcdd720c build 27-Aug-2018 11:21:34 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.geoshp.preview" MAIN_SCRIPT="ncsa.geo.shp.py" GEOSERVER_URL="" GEOSERVER_USERNAME="admin" GEOSERVER_PASSWORD="geoserver" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 27-Aug-2018 11:21:34 ---> Running in d327cad9955b build 27-Aug-2018 11:21:35 Removing intermediate container d327cad9955b build 27-Aug-2018 11:21:35 ---> 953bbf7ad760 build 27-Aug-2018 11:21:35 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json rasterTemplate.xml /home/clowder/ build 27-Aug-2018 11:21:35 ---> dd4f935f3975 build 27-Aug-2018 11:21:35 Successfully built dd4f935f3975 build 27-Aug-2018 11:21:35 Successfully tagged 13878:latest build 27-Aug-2018 11:21:36 Untagged: 13878:latest build 27-Aug-2018 11:21:36 Sending build context to Docker daemon 1.475MB build 27-Aug-2018 11:21:36 build 27-Aug-2018 11:21:36 Step 1/8 : FROM clowder/pyclowder:2 build 27-Aug-2018 11:21:36 ---> b27d04debca2 build 27-Aug-2018 11:21:36 Step 2/8 : MAINTAINER Yong Wook Kim build 27-Aug-2018 11:21:36 ---> Using cache build 27-Aug-2018 11:21:36 ---> 36147c4b9cfa build 27-Aug-2018 11:21:36 Step 3/8 : COPY requirements.txt /home/clowder/ build 27-Aug-2018 11:21:36 ---> bb028f30d080 build 27-Aug-2018 11:21:36 Step 4/8 : RUN apt-get update && apt-get install -y file gdal-bin python-gdal p7zip-full python-pyproj git && pip install --upgrade pip==9.0.3 && pip install -r /home/clowder/requirements.txt && rm -rf /var/lib/apt/lists/* build 27-Aug-2018 11:21:36 ---> Running in 762c048886a0 build 27-Aug-2018 11:21:37 Get:1 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] build 27-Aug-2018 11:21:37 Get:2 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] build 27-Aug-2018 11:21:37 Get:3 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [87.8 kB] build 27-Aug-2018 11:21:37 Get:4 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] build 27-Aug-2018 11:21:38 Get:5 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [699 kB] build 27-Aug-2018 11:21:38 Get:6 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] build 27-Aug-2018 11:21:38 Get:7 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] build 27-Aug-2018 11:21:38 Get:8 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] build 27-Aug-2018 11:21:38 Get:9 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [463 kB] build 27-Aug-2018 11:21:38 Get:10 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3748 B] build 27-Aug-2018 11:21:38 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] build 27-Aug-2018 11:21:38 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] build 27-Aug-2018 11:21:38 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] build 27-Aug-2018 11:21:39 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] build 27-Aug-2018 11:21:39 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [274 kB] build 27-Aug-2018 11:21:39 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1084 kB] build 27-Aug-2018 11:21:39 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] build 27-Aug-2018 11:21:39 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [873 kB] build 27-Aug-2018 11:21:39 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] build 27-Aug-2018 11:21:39 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7343 B] build 27-Aug-2018 11:21:39 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8086 B] build 27-Aug-2018 11:21:40 Fetched 25.5 MB in 3s (7544 kB/s) build 27-Aug-2018 11:21:41 Reading package lists... build 27-Aug-2018 11:21:42 Reading package lists... build 27-Aug-2018 11:21:42 Building dependency tree... build 27-Aug-2018 11:21:42 Reading state information... build 27-Aug-2018 11:21:42 The following additional packages will be installed: build 27-Aug-2018 11:21:42 fontconfig-config fonts-dejavu-core gcc-5-base git-man ifupdown iproute2 build 27-Aug-2018 11:21:42 isc-dhcp-client isc-dhcp-common krb5-locales less libaec0 libarmadillo6 build 27-Aug-2018 11:21:42 libarpack2 libasn1-8-heimdal libatm1 libblas-common libblas3 libbsd0 build 27-Aug-2018 11:21:42 libcurl3-gnutls libdap17v5 libdapclient6v5 libdns-export162 libedit2 build 27-Aug-2018 11:21:42 libepsilon1 liberror-perl libfontconfig1 libfreetype6 libfreexl1 libgdal1i build 27-Aug-2018 11:21:42 libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 libgif7 libgmp10 build 27-Aug-2018 11:21:42 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 27-Aug-2018 11:21:42 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 27-Aug-2018 11:21:42 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libjasper1 build 27-Aug-2018 11:21:42 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 libkmlbase1 build 27-Aug-2018 11:21:42 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 build 27-Aug-2018 11:21:42 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 libminizip1 libmnl0 build 27-Aug-2018 11:21:42 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 27-Aug-2018 11:21:42 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpopt0 libpq5 libproj9 build 27-Aug-2018 11:21:42 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 27-Aug-2018 11:21:42 libsasl2-modules-db libspatialite7 libstdc++6 libsuperlu4 libsz2 libtasn1-6 build 27-Aug-2018 11:21:42 libtiff5 liburiparser1 libwebp5 libwind0-heimdal libx11-6 libx11-data build 27-Aug-2018 11:21:42 libxau6 libxcb1 libxdmcp6 libxerces-c3.1 libxext6 libxml2 libxmuu1 build 27-Aug-2018 11:21:42 libxtables11 mysql-common netbase odbcinst odbcinst1debian2 openssh-client build 27-Aug-2018 11:21:42 patch perl perl-base perl-modules-5.22 proj-bin proj-data python-numpy build 27-Aug-2018 11:21:42 rename rsync sgml-base ucf xauth xml-core build 27-Aug-2018 11:21:42 Suggested packages: build 27-Aug-2018 11:21:42 gettext-base git-daemon-run | git-daemon-sysvinit git-doc git-el git-email build 27-Aug-2018 11:21:42 git-gui gitk gitweb git-arch git-cvs git-mediawiki git-svn ppp rdnssd build 27-Aug-2018 11:21:42 iproute2-doc resolvconf avahi-autoipd isc-dhcp-client-ddns apparmor build 27-Aug-2018 11:21:42 gnutls-bin krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools build 27-Aug-2018 11:21:42 libnetcdf4 libjasper-runtime liblcms2-utils libmyodbc odbc-postgresql build 27-Aug-2018 11:21:42 tdsodbc unixodbc-bin ogdi-bin poppler-data libsasl2-modules-otp build 27-Aug-2018 11:21:42 libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit build 27-Aug-2018 11:21:42 | libsasl2-modules-gssapi-heimdal ssh-askpass libpam-ssh keychain build 27-Aug-2018 11:21:42 monkeysphere p7zip-rar ed diffutils-doc perl-doc libterm-readline-gnu-perl build 27-Aug-2018 11:21:42 | libterm-readline-perl-perl make gcc gfortran python-dev python-nose build 27-Aug-2018 11:21:42 python-numpy-dbg python-numpy-doc openssh-server sgml-base-doc debhelper build 27-Aug-2018 11:21:42 The following NEW packages will be installed: build 27-Aug-2018 11:21:42 file fontconfig-config fonts-dejavu-core gdal-bin git git-man ifupdown build 27-Aug-2018 11:21:42 iproute2 isc-dhcp-client isc-dhcp-common krb5-locales less libaec0 build 27-Aug-2018 11:21:42 libarmadillo6 libarpack2 libasn1-8-heimdal libatm1 libblas-common libblas3 build 27-Aug-2018 11:21:42 libbsd0 libcurl3-gnutls libdap17v5 libdapclient6v5 libdns-export162 libedit2 build 27-Aug-2018 11:21:42 libepsilon1 liberror-perl libfontconfig1 libfreetype6 libfreexl1 libgdal1i build 27-Aug-2018 11:21:42 libgdbm3 libgeos-3.5.0 libgeos-c1v5 libgfortran3 libgif7 libgmp10 build 27-Aug-2018 11:21:42 libgnutls30 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal build 27-Aug-2018 11:21:42 libhdf4-0-alt libhdf5-10 libheimbase1-heimdal libheimntlm0-heimdal build 27-Aug-2018 11:21:42 libhogweed4 libhx509-5-heimdal libicu55 libidn11 libisc-export160 libjasper1 build 27-Aug-2018 11:21:42 libjbig0 libjpeg-turbo8 libjpeg8 libk5crypto3 libkeyutils1 libkmlbase1 build 27-Aug-2018 11:21:42 libkmldom1 libkmlengine1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 build 27-Aug-2018 11:21:42 liblapack3 liblcms2-2 libldap-2.4-2 libltdl7 libmagic1 libminizip1 libmnl0 build 27-Aug-2018 11:21:42 libmysqlclient20 libnetcdf11 libnettle6 libodbc1 libogdi3.2 libopenjp2-7 build 27-Aug-2018 11:21:42 libp11-kit0 libperl5.22 libpng12-0 libpoppler58 libpopt0 libpq5 libproj9 build 27-Aug-2018 11:21:42 libquadmath0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules build 27-Aug-2018 11:21:42 libsasl2-modules-db libspatialite7 libsuperlu4 libsz2 libtasn1-6 libtiff5 build 27-Aug-2018 11:21:42 liburiparser1 libwebp5 libwind0-heimdal libx11-6 libx11-data libxau6 libxcb1 build 27-Aug-2018 11:21:42 libxdmcp6 libxerces-c3.1 libxext6 libxml2 libxmuu1 libxtables11 mysql-common build 27-Aug-2018 11:21:42 netbase odbcinst odbcinst1debian2 openssh-client p7zip-full patch perl build 27-Aug-2018 11:21:42 perl-modules-5.22 proj-bin proj-data python-gdal python-numpy python-pyproj build 27-Aug-2018 11:21:42 rename rsync sgml-base ucf xauth xml-core build 27-Aug-2018 11:21:42 The following packages will be upgraded: build 27-Aug-2018 11:21:42 gcc-5-base libstdc++6 perl-base build 27-Aug-2018 11:21:43 3 upgraded, 126 newly installed, 0 to remove and 18 not upgraded. build 27-Aug-2018 11:21:43 Need to get 51.6 MB of archives. build 27-Aug-2018 11:21:43 After this operation, 225 MB of additional disk space will be used. build 27-Aug-2018 11:21:43 Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-base amd64 5.22.1-9ubuntu0.5 [1284 kB] build 27-Aug-2018 11:21:43 Get:2 http://archive.ubuntu.com/ubuntu xenial/main amd64 libatm1 amd64 1:2.5.1-1.5 [24.2 kB] build 27-Aug-2018 11:21:43 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmnl0 amd64 1.0.3-5 [12.0 kB] build 27-Aug-2018 11:21:43 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpopt0 amd64 1.16-10 [26.0 kB] build 27-Aug-2018 11:21:43 Get:5 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgdbm3 amd64 1.8.3-13.1 [16.9 kB] build 27-Aug-2018 11:21:43 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxau6 amd64 1:1.0.8-1 [8376 B] build 27-Aug-2018 11:21:43 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxdmcp6 amd64 1:1.1.2-1.1 [11.0 kB] build 27-Aug-2018 11:21:43 Get:8 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb1 amd64 1.11.1-1ubuntu1 [40.0 kB] build 27-Aug-2018 11:21:43 Get:9 http://archive.ubuntu.com/ubuntu xenial/main amd64 libx11-data all 2:1.6.3-1ubuntu2 [113 kB] build 27-Aug-2018 11:21:43 Get:10 http://archive.ubuntu.com/ubuntu xenial/main amd64 libx11-6 amd64 2:1.6.3-1ubuntu2 [571 kB] build 27-Aug-2018 11:21:44 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxext6 amd64 2:1.3.3-1 [29.4 kB] build 27-Aug-2018 11:21:44 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 sgml-base all 1.26+nmu4ubuntu1 [12.5 kB] build 27-Aug-2018 11:21:44 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libjpeg-turbo8 amd64 1.4.2-0ubuntu3.1 [111 kB] build 27-Aug-2018 11:21:44 Get:14 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblcms2-2 amd64 2.6-3ubuntu2 [137 kB] build 27-Aug-2018 11:21:44 Get:15 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] build 27-Aug-2018 11:21:44 Get:16 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] build 27-Aug-2018 11:21:44 Get:17 http://archive.ubuntu.com/ubuntu xenial/universe amd64 libsuperlu4 amd64 4.3+dfsg-3 [158 kB] build 27-Aug-2018 11:21:44 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl-modules-5.22 all 5.22.1-9ubuntu0.5 [2645 kB] build 27-Aug-2018 11:21:44 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libperl5.22 amd64 5.22.1-9ubuntu0.5 [3396 kB] build 27-Aug-2018 11:21:44 Get:20 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 perl amd64 5.22.1-9ubuntu0.5 [238 kB] build 27-Aug-2018 11:21:44 Get:21 http://archive.ubuntu.com/ubuntu xenial/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] build 27-Aug-2018 11:21:44 Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] build 27-Aug-2018 11:21:44 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] build 27-Aug-2018 11:21:44 Get:24 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmagic1 amd64 1:5.25-2ubuntu1.1 [216 kB] build 27-Aug-2018 11:21:44 Get:25 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 file amd64 1:5.25-2ubuntu1.1 [21.2 kB] build 27-Aug-2018 11:21:44 Get:26 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 iproute2 amd64 4.3.0-1ubuntu3.16.04.3 [522 kB] build 27-Aug-2018 11:21:44 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ifupdown amd64 0.8.10ubuntu1.4 [54.9 kB] build 27-Aug-2018 11:21:44 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libisc-export160 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [153 kB] build 27-Aug-2018 11:21:44 Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libdns-export162 amd64 1:9.10.3.dfsg.P4-8ubuntu1.10 [666 kB] build 27-Aug-2018 11:21:44 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-client amd64 4.3.3-5ubuntu12.10 [224 kB] build 27-Aug-2018 11:21:44 Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 isc-dhcp-common amd64 4.3.3-5ubuntu12.10 [105 kB] build 27-Aug-2018 11:21:44 Get:32 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 less amd64 481-2.1ubuntu0.2 [110 kB] build 27-Aug-2018 11:21:44 Get:33 http://archive.ubuntu.com/ubuntu xenial/main amd64 libbsd0 amd64 0.8.2-1 [41.7 kB] build 27-Aug-2018 11:21:44 Get:34 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] build 27-Aug-2018 11:21:44 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libnettle6 amd64 3.2-1ubuntu0.16.04.1 [93.5 kB] build 27-Aug-2018 11:21:44 Get:36 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libhogweed4 amd64 3.2-1ubuntu0.16.04.1 [136 kB] build 27-Aug-2018 11:21:44 Get:37 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 27-Aug-2018 11:21:44 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libp11-kit0 amd64 0.23.2-5~ubuntu16.04.1 [105 kB] build 27-Aug-2018 11:21:44 Get:39 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtasn1-6 amd64 4.7-3ubuntu0.16.04.3 [43.5 kB] build 27-Aug-2018 11:21:44 Get:40 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgnutls30 amd64 3.4.10-4ubuntu1.4 [548 kB] build 27-Aug-2018 11:21:44 Get:41 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpng12-0 amd64 1.2.54-1ubuntu1.1 [116 kB] build 27-Aug-2018 11:21:44 Get:42 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxtables11 amd64 1.6.0-2ubuntu3 [27.2 kB] build 27-Aug-2018 11:21:44 Get:43 http://archive.ubuntu.com/ubuntu xenial/main amd64 netbase all 5.3 [12.9 kB] build 27-Aug-2018 11:21:44 Get:44 http://archive.ubuntu.com/ubuntu xenial/main amd64 ucf all 3.0036 [52.9 kB] build 27-Aug-2018 11:21:44 Get:45 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 krb5-locales all 1.13.2+dfsg-5ubuntu2 [13.2 kB] build 27-Aug-2018 11:21:44 Get:46 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libroken18-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [41.4 kB] build 27-Aug-2018 11:21:44 Get:47 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasn1-8-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [174 kB] build 27-Aug-2018 11:21:44 Get:48 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5support0 amd64 1.13.2+dfsg-5ubuntu2 [30.8 kB] build 27-Aug-2018 11:21:44 Get:49 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libk5crypto3 amd64 1.13.2+dfsg-5ubuntu2 [81.2 kB] build 27-Aug-2018 11:21:44 Get:50 http://archive.ubuntu.com/ubuntu xenial/main amd64 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27-Aug-2018 11:21:44 Get:57 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libkrb5-26-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [202 kB] build 27-Aug-2018 11:21:45 Get:58 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libheimntlm0-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [15.1 kB] build 27-Aug-2018 11:21:45 Get:59 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgssapi3-heimdal amd64 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [96.1 kB] build 27-Aug-2018 11:21:45 Get:60 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules-db amd64 2.1.26.dfsg1-14build1 [14.5 kB] build 27-Aug-2018 11:21:45 Get:61 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-2 amd64 2.1.26.dfsg1-14build1 [48.7 kB] build 27-Aug-2018 11:21:45 Get:62 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libldap-2.4-2 amd64 2.4.42+dfsg-2ubuntu3.3 [161 kB] build 27-Aug-2018 11:21:45 Get:63 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d-1ubuntu0.1 [54.4 kB] build 27-Aug-2018 11:21:45 Get:64 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcurl3-gnutls amd64 7.47.0-1ubuntu2.8 [185 kB] build 27-Aug-2018 11:21:45 Get:65 http://archive.ubuntu.com/ubuntu xenial/main amd64 libedit2 amd64 3.1-20150325-1ubuntu2 [76.5 kB] build 27-Aug-2018 11:21:45 Get:66 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libicu55 amd64 55.1-7ubuntu0.4 [7646 kB] build 27-Aug-2018 11:21:45 Get:67 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsasl2-modules amd64 2.1.26.dfsg1-14build1 [47.5 kB] build 27-Aug-2018 11:21:45 Get:68 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libxml2 amd64 2.9.3+dfsg1-1ubuntu0.6 [697 kB] build 27-Aug-2018 11:21:45 Get:69 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxmuu1 amd64 2:1.1.2-2 [9674 B] build 27-Aug-2018 11:21:45 Get:70 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 openssh-client amd64 1:7.2p2-4ubuntu2.4 [589 kB] build 27-Aug-2018 11:21:45 Get:71 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 rsync amd64 3.1.1-3ubuntu1.2 [329 kB] build 27-Aug-2018 11:21:45 Get:72 http://archive.ubuntu.com/ubuntu xenial/main amd64 xauth amd64 1:1.0.9-1ubuntu2 [22.7 kB] build 27-Aug-2018 11:21:45 Get:73 http://archive.ubuntu.com/ubuntu xenial/main amd64 xml-core all 0.13+nmu2 [23.3 kB] build 27-Aug-2018 11:21:45 Get:74 http://archive.ubuntu.com/ubuntu xenial/main amd64 fonts-dejavu-core all 2.35-1 [1039 kB] build 27-Aug-2018 11:21:45 Get:75 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 fontconfig-config all 2.11.94-0ubuntu1.1 [49.9 kB] build 27-Aug-2018 11:21:45 Get:76 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB] build 27-Aug-2018 11:21:45 Get:77 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB] build 27-Aug-2018 11:21:45 Get:78 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build 27-Aug-2018 11:23:12 Setting up libx11-data (2:1.6.3-1ubuntu2) ... build 27-Aug-2018 11:23:13 Setting up libx11-6:amd64 (2:1.6.3-1ubuntu2) ... build 27-Aug-2018 11:23:13 Setting up libxext6:amd64 (2:1.3.3-1) ... build 27-Aug-2018 11:23:13 Setting up sgml-base (1.26+nmu4ubuntu1) ... build 27-Aug-2018 11:23:13 Setting up libjpeg-turbo8:amd64 (1.4.2-0ubuntu3.1) ... build 27-Aug-2018 11:23:14 Setting up liblcms2-2:amd64 (2.6-3ubuntu2) ... build 27-Aug-2018 11:23:14 Setting up libblas-common (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:23:14 Setting up libblas3 (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:23:14 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode build 27-Aug-2018 11:23:14 Setting up libsuperlu4:amd64 (4.3+dfsg-3) ... build 27-Aug-2018 11:23:14 Setting up perl-modules-5.22 (5.22.1-9ubuntu0.5) ... build 27-Aug-2018 11:23:14 Setting up libperl5.22:amd64 (5.22.1-9ubuntu0.5) ... build 27-Aug-2018 11:23:14 Setting up perl (5.22.1-9ubuntu0.5) ... build 27-Aug-2018 11:23:15 update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode build 27-Aug-2018 11:23:15 Setting up libjbig0:amd64 (2.1-3.1) ... build 27-Aug-2018 11:23:15 Setting up libmagic1:amd64 (1:5.25-2ubuntu1.1) ... build 27-Aug-2018 11:23:15 Setting up file (1:5.25-2ubuntu1.1) ... build 27-Aug-2018 11:23:15 Setting up iproute2 (4.3.0-1ubuntu3.16.04.3) ... build 27-Aug-2018 11:23:16 Setting up ifupdown (0.8.10ubuntu1.4) ... build 27-Aug-2018 11:23:16 Creating /etc/network/interfaces. build 27-Aug-2018 11:23:17 Setting up libisc-export160 (1:9.10.3.dfsg.P4-8ubuntu1.10) ... build 27-Aug-2018 11:23:17 Setting up libdns-export162 (1:9.10.3.dfsg.P4-8ubuntu1.10) ... build 27-Aug-2018 11:23:17 Setting up isc-dhcp-client (4.3.3-5ubuntu12.10) ... build 27-Aug-2018 11:23:18 Setting up isc-dhcp-common (4.3.3-5ubuntu12.10) ... build 27-Aug-2018 11:23:18 Setting up less (481-2.1ubuntu0.2) ... build 27-Aug-2018 11:23:18 debconf: unable to initialize frontend: Dialog build 27-Aug-2018 11:23:18 debconf: (TERM is not set, so the dialog frontend is not usable.) build 27-Aug-2018 11:23:18 debconf: falling back to frontend: Readline build 27-Aug-2018 11:23:18 Setting up libbsd0:amd64 (0.8.2-1) ... build 27-Aug-2018 11:23:18 Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ... build 27-Aug-2018 11:23:18 Setting up libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ... build 27-Aug-2018 11:23:19 Setting up libhogweed4:amd64 (3.2-1ubuntu0.16.04.1) ... build 27-Aug-2018 11:23:19 Setting up libidn11:amd64 (1.32-3ubuntu1.2) ... build 27-Aug-2018 11:23:19 Setting up libp11-kit0:amd64 (0.23.2-5~ubuntu16.04.1) ... build 27-Aug-2018 11:23:19 Setting up libtasn1-6:amd64 (4.7-3ubuntu0.16.04.3) ... build 27-Aug-2018 11:23:19 Setting up libgnutls30:amd64 (3.4.10-4ubuntu1.4) ... build 27-Aug-2018 11:23:19 Setting up libpng12-0:amd64 (1.2.54-1ubuntu1.1) ... build 27-Aug-2018 11:23:19 Setting up libxtables11:amd64 (1.6.0-2ubuntu3) ... build 27-Aug-2018 11:23:20 Setting up netbase (5.3) ... build 27-Aug-2018 11:23:20 Setting up ucf (3.0036) ... build 27-Aug-2018 11:23:20 debconf: unable to initialize frontend: Dialog build 27-Aug-2018 11:23:20 debconf: (TERM is not set, so the dialog frontend is not usable.) build 27-Aug-2018 11:23:20 debconf: falling back to frontend: Readline build 27-Aug-2018 11:23:20 Setting up krb5-locales (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:23:20 Setting up libroken18-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:23:20 Setting up libasn1-8-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:23:20 Setting up libkrb5support0:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:23:21 Setting up libk5crypto3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:23:21 Setting up libkeyutils1:amd64 (1.5.9-8ubuntu1) ... build 27-Aug-2018 11:23:21 Setting up libkrb5-3:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:23:21 Setting up libgssapi-krb5-2:amd64 (1.13.2+dfsg-5ubuntu2) ... build 27-Aug-2018 11:23:21 Setting up libhcrypto4-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:23:21 Setting up libheimbase1-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:23:21 Setting up libwind0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:23:21 Setting up libhx509-5-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:23:22 Setting up libkrb5-26-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:23:22 Setting up libheimntlm0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:23:22 Setting up libgssapi3-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... build 27-Aug-2018 11:23:22 Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-14build1) ... build 27-Aug-2018 11:23:22 Setting up libsasl2-2:amd64 (2.1.26.dfsg1-14build1) ... build 27-Aug-2018 11:23:23 Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu3.3) ... build 27-Aug-2018 11:23:23 Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d-1ubuntu0.1) ... build 27-Aug-2018 11:23:23 Setting up libcurl3-gnutls:amd64 (7.47.0-1ubuntu2.8) ... build 27-Aug-2018 11:23:23 Setting up libedit2:amd64 (3.1-20150325-1ubuntu2) ... build 27-Aug-2018 11:23:23 Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... build 27-Aug-2018 11:23:24 Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-14build1) ... build 27-Aug-2018 11:23:24 Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ... build 27-Aug-2018 11:23:24 Setting up libxmuu1:amd64 (2:1.1.2-2) ... build 27-Aug-2018 11:23:24 Setting up openssh-client (1:7.2p2-4ubuntu2.4) ... build 27-Aug-2018 11:23:24 Setting up rsync (3.1.1-3ubuntu1.2) ... build 27-Aug-2018 11:23:25 invoke-rc.d: could not determine current runlevel build 27-Aug-2018 11:23:25 invoke-rc.d: policy-rc.d denied execution of restart. build 27-Aug-2018 11:23:25 Setting up xauth (1:1.0.9-1ubuntu2) ... build 27-Aug-2018 11:23:25 Setting up xml-core (0.13+nmu2) ... build 27-Aug-2018 11:23:26 Setting up fonts-dejavu-core (2.35-1) ... build 27-Aug-2018 11:23:26 Setting up fontconfig-config (2.11.94-0ubuntu1.1) ... build 27-Aug-2018 11:23:28 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:23:29 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ... build 27-Aug-2018 11:23:29 Setting up liblapack3 (3.6.0-2ubuntu2) ... build 27-Aug-2018 11:23:29 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode build 27-Aug-2018 11:23:29 Setting up libarpack2 (3.3.0-1build2) ... build 27-Aug-2018 11:23:29 Setting up libarmadillo6 (1:6.500.5+dfsg-1) ... build 27-Aug-2018 11:23:29 Setting up libdap17v5:amd64 (3.15.1-7) ... build 27-Aug-2018 11:23:29 Setting up libdapclient6v5:amd64 (3.15.1-7) ... build 27-Aug-2018 11:23:29 Setting up libepsilon1:amd64 (0.9.2-3ubuntu1) ... build 27-Aug-2018 11:23:29 Setting up libfreexl1:amd64 (1.0.2-1) ... build 27-Aug-2018 11:23:30 Setting up libgeos-3.5.0 (3.5.0-1ubuntu2) ... build 27-Aug-2018 11:23:30 Setting up libgeos-c1v5 (3.5.0-1ubuntu2) ... build 27-Aug-2018 11:23:30 Setting up libgif7:amd64 (5.1.4-0.3~16.04) ... build 27-Aug-2018 11:23:30 Setting up libjpeg8:amd64 (8c-2ubuntu8) ... build 27-Aug-2018 11:23:30 Setting up libhdf4-0-alt (4.2.10-3.2) ... build 27-Aug-2018 11:23:30 Setting up libaec0:amd64 (0.3.2-1) ... build 27-Aug-2018 11:23:30 Setting up libsz2:amd64 (0.3.2-1) ... build 27-Aug-2018 11:23:31 Setting up libhdf5-10:amd64 (1.8.16+docs-4ubuntu1) ... build 27-Aug-2018 11:23:31 Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.2) ... build 27-Aug-2018 11:23:32 Setting up libminizip1:amd64 (1.1-8) ... build 27-Aug-2018 11:23:32 Setting up liburiparser1:amd64 (0.8.4-1) ... build 27-Aug-2018 11:23:32 Setting up libkmlbase1:amd64 (1.3.0-1) ... build 27-Aug-2018 11:23:32 Setting up libkmldom1:amd64 (1.3.0-1) ... build 27-Aug-2018 11:23:32 Setting up libkmlengine1:amd64 (1.3.0-1) ... build 27-Aug-2018 11:23:32 Setting up mysql-common (5.7.23-0ubuntu0.16.04.1) ... build 27-Aug-2018 11:23:33 update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode build 27-Aug-2018 11:23:33 Setting up libmysqlclient20:amd64 (5.7.23-0ubuntu0.16.04.1) ... build 27-Aug-2018 11:23:33 Setting up libnetcdf11 (1:4.4.0-2) ... build 27-Aug-2018 11:23:33 Setting up libltdl7:amd64 (2.4.6-0.1) ... build 27-Aug-2018 11:23:33 Setting up libodbc1:amd64 (2.3.1-4.1) ... build 27-Aug-2018 11:23:33 Setting up proj-data (4.9.2-2) ... build 27-Aug-2018 11:23:33 Setting up libproj9 (4.9.2-2) ... build 27-Aug-2018 11:23:33 Setting up libogdi3.2 (3.2.0~beta2-7.1build1) ... build 27-Aug-2018 11:23:34 Setting up libopenjp2-7:amd64 (2.1.0-2.1ubuntu0.1) ... build 27-Aug-2018 11:23:34 Setting up libfreetype6:amd64 (2.6.1-0.1ubuntu2.3) ... build 27-Aug-2018 11:23:34 Setting up libfontconfig1:amd64 (2.11.94-0ubuntu1.1) ... build 27-Aug-2018 11:23:34 Setting up libtiff5:amd64 (4.0.6-1ubuntu0.4) ... build 27-Aug-2018 11:23:34 Setting up libpoppler58:amd64 (0.41.0-0ubuntu1.7) ... build 27-Aug-2018 11:23:34 Setting up libpq5:amd64 (9.5.14-0ubuntu0.16.04) ... build 27-Aug-2018 11:23:34 Setting up libspatialite7:amd64 (4.3.0a-5) ... build 27-Aug-2018 11:23:34 Setting up libwebp5:amd64 (0.4.4-1) ... build 27-Aug-2018 11:23:35 Setting up libxerces-c3.1:amd64 (3.1.3+debian-1) ... build 27-Aug-2018 11:23:35 Setting up liberror-perl (0.17-1.2) ... build 27-Aug-2018 11:23:35 Setting up git-man (1:2.7.4-0ubuntu1.4) ... build 27-Aug-2018 11:23:35 Setting up git (1:2.7.4-0ubuntu1.4) ... build 27-Aug-2018 11:23:35 Setting up p7zip-full (9.20.1~dfsg.1-4.2) ... build 27-Aug-2018 11:23:35 Setting up patch (2.7.5-1ubuntu0.16.04.1) ... build 27-Aug-2018 11:23:35 Setting up python-numpy (1:1.11.0-1ubuntu1) ... build 27-Aug-2018 11:23:37 Setting up python-pyproj (1.9.5.1-1build1) ... build 27-Aug-2018 11:23:38 Setting up rename (0.20-4) ... build 27-Aug-2018 11:23:39 update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode build 27-Aug-2018 11:23:39 Setting up proj-bin (4.9.2-2) ... build 27-Aug-2018 11:23:39 Setting up odbcinst1debian2:amd64 (2.3.1-4.1) ... build 27-Aug-2018 11:23:39 Setting up libgdal1i (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:23:39 Setting up gdal-bin (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:23:39 Setting up python-gdal (1.11.3+dfsg-3build2) ... build 27-Aug-2018 11:23:40 Setting up odbcinst (2.3.1-4.1) ... build 27-Aug-2018 11:23:41 Processing triggers for libc-bin (2.23-0ubuntu10) ... build 27-Aug-2018 11:23:41 Processing triggers for systemd (229-4ubuntu21.2) ... build 27-Aug-2018 11:23:41 Processing triggers for sgml-base (1.26+nmu4ubuntu1) ... build 27-Aug-2018 11:23:42 Collecting pip==9.0.3 build 27-Aug-2018 11:23:42 Downloading https://files.pythonhosted.org/packages/ac/95/a05b56bb975efa78d3557efa36acaf9cf5d2fd0ee0062060493687432e03/pip-9.0.3-py2.py3-none-any.whl (1.4MB) build 27-Aug-2018 11:23:42 Installing collected packages: pip build 27-Aug-2018 11:23:42 Found existing installation: pip 8.1.1 build 27-Aug-2018 11:23:42 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 27-Aug-2018 11:23:43 Successfully installed pip-9.0.3 build 27-Aug-2018 11:23:43 You are using pip version 9.0.3, however version 18.0 is available. build 27-Aug-2018 11:23:43 You should consider upgrading via the 'pip install --upgrade pip' command. build 27-Aug-2018 11:23:43 Collecting gsconfig==1.0.3 (from -r /home/clowder/requirements.txt (line 1)) build 27-Aug-2018 11:23:43 Downloading https://files.pythonhosted.org/packages/85/a9/ec6bf3d2de4763a826d6b2b569d7e1b22e8c660c3bd110bb22ea060fad39/gsconfig-1.0.3.tar.gz build 27-Aug-2018 11:23:44 Collecting pika==0.10.0 (from -r /home/clowder/requirements.txt (line 2)) build 27-Aug-2018 11:23:44 Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB) build 27-Aug-2018 11:23:44 Collecting requests==2.10.0 (from -r /home/clowder/requirements.txt (line 3)) build 27-Aug-2018 11:23:44 Downloading https://files.pythonhosted.org/packages/99/b4/63d99ba8e189c47d906b43bae18af4396e336f2b1bfec86af31efe2d2cb8/requests-2.10.0-py2.py3-none-any.whl (506kB) build 27-Aug-2018 11:23:44 Collecting wheel==0.24.0 (from -r /home/clowder/requirements.txt (line 4)) build 27-Aug-2018 11:23:44 Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB) build 27-Aug-2018 11:23:44 Collecting xmltodict==0.11.0 (from -r /home/clowder/requirements.txt (line 6)) build 27-Aug-2018 11:23:44 Downloading https://files.pythonhosted.org/packages/42/a9/7e99652c6bc619d19d58cdd8c47560730eb5825d43a7e25db2e1d776ceb7/xmltodict-0.11.0-py2.py3-none-any.whl build 27-Aug-2018 11:23:44 Collecting httplib2>=0.7.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 27-Aug-2018 11:23:44 Downloading https://files.pythonhosted.org/packages/fd/ce/aa4a385e3e9fd351737fd2b07edaa56e7a730448465aceda6b35086a0d9b/httplib2-0.11.3.tar.gz (215kB) build 27-Aug-2018 11:23:45 Collecting gisdata==0.5.4 (from gsconfig==1.0.3->-r /home/clowder/requirements.txt (line 1)) build 27-Aug-2018 11:23:45 Downloading https://files.pythonhosted.org/packages/2a/e3/bd15b7a5d0cdd8d316b051ac3e2ec180bd09d9a144e6df35733cbdc9ca82/gisdata-0.5.4.tar.gz (1.2MB) build 27-Aug-2018 11:23:45 Installing collected packages: httplib2, gisdata, gsconfig, pika, requests, wheel, xmltodict build 27-Aug-2018 11:23:45 Running setup.py install for httplib2: started build 27-Aug-2018 11:23:45 Running setup.py install for httplib2: finished with status 'done' build 27-Aug-2018 11:23:45 Running setup.py install for gisdata: started build 27-Aug-2018 11:23:46 Running setup.py install for gisdata: finished with status 'done' build 27-Aug-2018 11:23:46 Running setup.py install for gsconfig: started build 27-Aug-2018 11:23:46 Running setup.py install for gsconfig: finished with status 'done' build 27-Aug-2018 11:23:46 Found existing installation: pika 0.11.2 build 27-Aug-2018 11:23:46 Uninstalling pika-0.11.2: build 27-Aug-2018 11:23:47 Successfully uninstalled pika-0.11.2 build 27-Aug-2018 11:23:47 Found existing installation: requests 2.18.4 build 27-Aug-2018 11:23:47 Uninstalling requests-2.18.4: build 27-Aug-2018 11:23:49 Successfully uninstalled requests-2.18.4 build 27-Aug-2018 11:23:49 Successfully installed gisdata-0.5.4 gsconfig-1.0.3 httplib2-0.11.3 pika-0.10.0 requests-2.10.0 wheel-0.24.0 xmltodict-0.11.0 build 27-Aug-2018 11:23:49 You are using pip version 9.0.3, however version 18.0 is available. build 27-Aug-2018 11:23:49 You should consider upgrading via the 'pip install --upgrade pip' command. build 27-Aug-2018 11:23:54 Removing intermediate container 762c048886a0 build 27-Aug-2018 11:23:54 ---> 0c9a5e1ad306 build 27-Aug-2018 11:23:54 Step 5/8 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 27-Aug-2018 11:23:54 ---> Running in 4157b3ed9b73 build 27-Aug-2018 11:23:54 Removing intermediate container 4157b3ed9b73 build 27-Aug-2018 11:23:54 ---> 1c1a02a9a2bf build 27-Aug-2018 11:23:54 Step 6/8 : CMD ["extractor"] build 27-Aug-2018 11:23:54 ---> Running in c68e04986bdd build 27-Aug-2018 11:23:55 Removing intermediate container c68e04986bdd build 27-Aug-2018 11:23:55 ---> b1784ec9ead2 build 27-Aug-2018 11:23:55 Step 7/8 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.pycsw.extractor" MAIN_SCRIPT="ncsa.geo.pycsw.py" GEOSERVER_URL="" GEOSERVER_WORKSPACE="clowder" PYCSW_URL="http://localhost:8000/pycsw" PROXY_URL='http://localhost:9000/api/proxy/' PROXY_ON='false' build 27-Aug-2018 11:23:55 ---> Running in 74a8da4c0a06 build 27-Aug-2018 11:23:55 Removing intermediate container 74a8da4c0a06 build 27-Aug-2018 11:23:55 ---> 2be09fd0bc87 build 27-Aug-2018 11:23:55 Step 8/8 : COPY entrypoint.sh *.py extractor_info.json pycsw_insert_template.xml /home/clowder/ build 27-Aug-2018 11:23:56 ---> 03af612127c0 build 27-Aug-2018 11:23:56 Successfully built 03af612127c0 build 27-Aug-2018 11:23:56 Successfully tagged 13878:latest build 27-Aug-2018 11:23:56 Untagged: 13878:latest build 27-Aug-2018 11:23:56 Untagged: clowder/extractors-geotiff-metadata:latest build 27-Aug-2018 11:23:56 Untagged: clowder/extractors-geotiff-preview:latest build 27-Aug-2018 11:23:56 Untagged: clowder/extractors-geoshp-preview:latest build 27-Aug-2018 11:23:57 Untagged: clowder/extractors-pycsw:latest simple 27-Aug-2018 11:23:57 Finished task 'docker build' with result: Success simple 27-Aug-2018 11:23:57 Running post build plugin 'Docker Container Cleanup' simple 27-Aug-2018 11:23:57 Running post build plugin 'NCover Results Collector' simple 27-Aug-2018 11:23:57 Running post build plugin 'Clover Results Collector' simple 27-Aug-2018 11:23:57 Running post build plugin 'npm Cache Cleanup' simple 27-Aug-2018 11:23:57 Running post build plugin 'Artifact Copier' simple 27-Aug-2018 11:23:57 Finalising the build... simple 27-Aug-2018 11:23:57 Stopping timer. simple 27-Aug-2018 11:23:57 Build CATS-EXGEO13-JOB1-6 completed. simple 27-Aug-2018 11:23:57 Running on server: post build plugin 'NCover Results Collector' simple 27-Aug-2018 11:23:57 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 27-Aug-2018 11:23:57 Running on server: post build plugin 'Clover Delta Calculator' simple 27-Aug-2018 11:23:57 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 27-Aug-2018 11:23:57 All post build plugins have finished simple 27-Aug-2018 11:23:57 Generating build results summary... simple 27-Aug-2018 11:23:57 Saving build results to disk... simple 27-Aug-2018 11:23:57 Logging substituted variables... simple 27-Aug-2018 11:23:57 Indexing build results... simple 27-Aug-2018 11:23:57 Finished building CATS-EXGEO13-JOB1-6.