simple	23-Mar-2018 14:16:31	Build Clowder - extractors-msc - Default Job #34 (CATS-MSC-JOB1-34) started building on agent buildserver-3.os.ncsa.edu
simple	23-Mar-2018 14:16:31	Remote agent on host buildserver-3.os.ncsa.edu
simple	23-Mar-2018 14:16:31	Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1
simple	23-Mar-2018 14:16:31	Executing build Clowder - extractors-msc - Default Job #34 (CATS-MSC-JOB1-34)
simple	23-Mar-2018 14:16:31	Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
simple	23-Mar-2018 14:16:31	Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1
simple	23-Mar-2018 14:16:31	Updating source code to revision: 6aaab3692bc88bb1c0016521723c45399615c5f2
simple	23-Mar-2018 14:16:31	Fetching 'refs/heads/master' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git'. Will try to do a shallow fetch.
simple	23-Mar-2018 14:16:31	Warning: Permanently added '[127.0.0.1]:40855' (RSA) to the list of known hosts.
simple	23-Mar-2018 14:16:31	Checking out revision 6aaab3692bc88bb1c0016521723c45399615c5f2.
simple	23-Mar-2018 14:16:32	Already on 'master'
simple	23-Mar-2018 14:16:32	Updated source code to revision: 6aaab3692bc88bb1c0016521723c45399615c5f2
simple	23-Mar-2018 14:16:32	Finished task 'Checkout Default Repository' with result: Success
simple	23-Mar-2018 14:16:32	Running pre-build action: VCS Version Collector
simple	23-Mar-2018 14:16:32	Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
command	23-Mar-2018 14:16:32	Beginning to execute external process for build 'Clowder - extractors-msc - Default Job #34 (CATS-MSC-JOB1-34)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=master\nbamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm\nbamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster\nbamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node\nbamboo_dependency_parent_0=CATS-PYC2-69\nbamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster\nbamboo_dependency_parent_total=1\nbamboo_planRepository_1_branchDisplayName=master\nbamboo_repository_revision_number=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-MSC-JOB1-34\nbamboo_repository_127172627_branch_name=master\nbamboo_repository_127172627_git_branch=master\nbamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build\nbamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1\nbamboo_planRepository_1_name=extractors-msc\nbamboo_buildKey=CATS-MSC-JOB1\nbamboo_capability_system_os=linux\nbamboo_shortPlanName=extractors-msc\nbamboo_planRepository_name=extractors-msc\nbamboo_repository_127172627_git_username=\nbamboo_buildNumber=34\nbamboo_shortJobName=Default Job\nbamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-MSC-JOB1-34\nbamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_agentId=143032321\nbamboo_planName=Clowder - extractors-msc\nbamboo_repository_127172627_revision_number=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_shortPlanKey=MSC\nbamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt\nbamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node\nbamboo_shortJobKey=JOB1\nbamboo_planRepository_revision=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_buildTimeStamp=2018-03-23T13:56:51.096-05:00\nbamboo_repository_previous_revision_number=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm\nbamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1\nbamboo_planRepository_previousRevision=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_repository_git_branch=master\nbamboo_buildResultKey=CATS-MSC-JOB1-34\nbamboo_repository_branch_name=master\nbamboo_buildPlanName=Clowder - extractors-msc - Default Job\nbamboo_planRepository_1_revision=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_capability_system_builder_command_python3=/usr/bin/python3\nbamboo_repository_name=extractors-msc\nbamboo_buildFailed=false\nbamboo_capability_system_docker_executable=/usr/bin/docker\nbamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt\nbamboo_planRepository_branch=master\nbamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/usr/bin/git\nbamboo_repository_git_username=\nbamboo_planRepository_1_previousRevision=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13\nbamboo_repository_127172627_name=extractors-msc\nbamboo_planRepository_branchDisplayName=master\nbamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs\nbamboo_planRepository_1_type=bbserver\nbamboo_planRepository_branchName=master\nbamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7\nbamboo_capability_system_hostname=buildserver-1\nbamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_software_mongo=/usr/bin/mongo\nbamboo_plan_storageTag=plan-126976035\nbamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs\nbamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl\nbamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=bbserver\nbamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache\nbamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_repository_127172627_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node\nbamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4\nbamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9\nbamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp\nbamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1\nbamboo_planKey=CATS-MSC\nbamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_planRepository_username=\nbamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41\nbamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh\nbamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60\nbamboo_repository_127172627_previous_revision_number=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_planRepository_1_branchName=master\n
build	23-Mar-2018 14:16:32	Sending build context to Docker daemon 2.284 MB
build	23-Mar-2018 14:16:32	
build	23-Mar-2018 14:16:32	Step 1/11 : FROM clowder/pyclowder:1
build	23-Mar-2018 14:16:32	 ---> d1a9e970ed30
build	23-Mar-2018 14:16:32	Step 2/11 : MAINTAINER Rob Kooper <kooper@illinois.edu>
build	23-Mar-2018 14:16:32	 ---> Using cache
build	23-Mar-2018 14:16:32	 ---> b30688e34e78
build	23-Mar-2018 14:16:32	Step 3/11 : VOLUME /matlab
build	23-Mar-2018 14:16:32	 ---> Using cache
build	23-Mar-2018 14:16:32	 ---> ea0302e156e3
build	23-Mar-2018 14:16:32	Step 4/11 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.diagnosis" MATLAB_BINARY "/matlab/bin/matlab" MAIN_SCRIPT "diagnosis.py"
build	23-Mar-2018 14:16:32	 ---> Using cache
build	23-Mar-2018 14:16:32	 ---> 5baad9087e42
build	23-Mar-2018 14:16:32	Step 5/11 : USER root
build	23-Mar-2018 14:16:32	 ---> Using cache
build	23-Mar-2018 14:16:32	 ---> b1e0eaf77f64
build	23-Mar-2018 14:16:32	Step 6/11 : RUN pip install --upgrade pip
build	23-Mar-2018 14:16:32	 ---> Using cache
build	23-Mar-2018 14:16:32	 ---> 909c5d4b0489
build	23-Mar-2018 14:16:32	Step 7/11 : RUN apt-get -qq -y update && apt-get -y install         libxext6         libxmu6         libxt6         wget     && mkdir -p /matlab     && rm -rf /var/lib/apt/lists/*
build	23-Mar-2018 14:16:32	 ---> Using cache
build	23-Mar-2018 14:16:32	 ---> c2e10a7222c5
build	23-Mar-2018 14:16:32	Step 8/11 : USER clowder
build	23-Mar-2018 14:16:32	 ---> Using cache
build	23-Mar-2018 14:16:32	 ---> 0711b80bd134
build	23-Mar-2018 14:16:32	Step 9/11 : COPY entrypoint.sh *.py *.m data/*.mat *.json /home/clowder/
build	23-Mar-2018 14:16:32	 ---> Using cache
build	23-Mar-2018 14:16:32	 ---> 9b76965e9c53
build	23-Mar-2018 14:16:32	Step 10/11 : ENTRYPOINT /home/clowder/entrypoint.sh
build	23-Mar-2018 14:16:32	 ---> Using cache
build	23-Mar-2018 14:16:32	 ---> 20838c1f0ebf
build	23-Mar-2018 14:16:32	Step 11/11 : CMD extractor
build	23-Mar-2018 14:16:32	 ---> Using cache
build	23-Mar-2018 14:16:32	 ---> 038f7522237e
build	23-Mar-2018 14:16:32	Successfully built 038f7522237e
build	23-Mar-2018 14:16:32	The push refers to a repository [docker.io/clowder/extractors-msc-kidney]
build	23-Mar-2018 14:16:32	3543093191ef: Preparing
build	23-Mar-2018 14:16:32	c8cb9129a1f4: Preparing
build	23-Mar-2018 14:16:32	0e79a11ae6b6: Preparing
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build	23-Mar-2018 14:16:32	0fbe2bcb1bf9: Preparing
build	23-Mar-2018 14:16:32	59669fcdd5eb: Preparing
build	23-Mar-2018 14:16:32	0fbe2bcb1bf9: Waiting
build	23-Mar-2018 14:16:32	7f7a065d245a: Preparing
build	23-Mar-2018 14:16:32	f96e6b25195f: Preparing
build	23-Mar-2018 14:16:32	c56153825175: Preparing
build	23-Mar-2018 14:16:32	ae620432889d: Preparing
build	23-Mar-2018 14:16:32	a2022691bf95: Preparing
build	23-Mar-2018 14:16:32	7f7a065d245a: Waiting
build	23-Mar-2018 14:16:32	59669fcdd5eb: Waiting
build	23-Mar-2018 14:16:32	f96e6b25195f: Waiting
build	23-Mar-2018 14:16:32	ae620432889d: Waiting
build	23-Mar-2018 14:16:32	c56153825175: Waiting
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build	23-Mar-2018 14:16:32	3543093191ef: Layer already exists
build	23-Mar-2018 14:16:32	59669fcdd5eb: Layer already exists
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build	23-Mar-2018 14:16:32	7f7a065d245a: Layer already exists
build	23-Mar-2018 14:16:32	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:32	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:32	c56153825175: Layer already exists
build	23-Mar-2018 14:16:33	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:33	browndog_v0.2.0: digest: sha256:4569996f156e795c682a971f643b754f85a496e78097ad8513f2737d5197954e size: 2826
build	23-Mar-2018 14:16:33	The push refers to a repository [docker.io/clowder/extractors-msc-kidney]
build	23-Mar-2018 14:16:33	3543093191ef: Preparing
build	23-Mar-2018 14:16:33	c8cb9129a1f4: Preparing
build	23-Mar-2018 14:16:33	0e79a11ae6b6: Preparing
build	23-Mar-2018 14:16:33	0cdb02ac1d86: Preparing
build	23-Mar-2018 14:16:33	f2297bdfc824: Preparing
build	23-Mar-2018 14:16:33	0fbe2bcb1bf9: Preparing
build	23-Mar-2018 14:16:33	59669fcdd5eb: Preparing
build	23-Mar-2018 14:16:33	7f7a065d245a: Preparing
build	23-Mar-2018 14:16:33	f96e6b25195f: Preparing
build	23-Mar-2018 14:16:33	c56153825175: Preparing
build	23-Mar-2018 14:16:33	ae620432889d: Preparing
build	23-Mar-2018 14:16:33	a2022691bf95: Preparing
build	23-Mar-2018 14:16:33	0fbe2bcb1bf9: Waiting
build	23-Mar-2018 14:16:33	59669fcdd5eb: Waiting
build	23-Mar-2018 14:16:33	f96e6b25195f: Waiting
build	23-Mar-2018 14:16:33	ae620432889d: Waiting
build	23-Mar-2018 14:16:33	a2022691bf95: Waiting
build	23-Mar-2018 14:16:34	f2297bdfc824: Layer already exists
build	23-Mar-2018 14:16:34	0e79a11ae6b6: Layer already exists
build	23-Mar-2018 14:16:34	c8cb9129a1f4: Layer already exists
build	23-Mar-2018 14:16:34	0cdb02ac1d86: Layer already exists
build	23-Mar-2018 14:16:34	3543093191ef: Layer already exists
build	23-Mar-2018 14:16:34	59669fcdd5eb: Layer already exists
build	23-Mar-2018 14:16:34	0fbe2bcb1bf9: Layer already exists
build	23-Mar-2018 14:16:34	7f7a065d245a: Layer already exists
build	23-Mar-2018 14:16:34	c56153825175: Layer already exists
build	23-Mar-2018 14:16:34	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:34	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:34	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:34	browndog_v0.3.0: digest: sha256:4569996f156e795c682a971f643b754f85a496e78097ad8513f2737d5197954e size: 2826
build	23-Mar-2018 14:16:34	The push refers to a repository [docker.io/clowder/extractors-msc-kidney]
build	23-Mar-2018 14:16:34	3543093191ef: Preparing
build	23-Mar-2018 14:16:34	c8cb9129a1f4: Preparing
build	23-Mar-2018 14:16:34	0e79a11ae6b6: Preparing
build	23-Mar-2018 14:16:34	0cdb02ac1d86: Preparing
build	23-Mar-2018 14:16:34	f2297bdfc824: Preparing
build	23-Mar-2018 14:16:34	0fbe2bcb1bf9: Preparing
build	23-Mar-2018 14:16:34	59669fcdd5eb: Preparing
build	23-Mar-2018 14:16:34	7f7a065d245a: Preparing
build	23-Mar-2018 14:16:34	f96e6b25195f: Preparing
build	23-Mar-2018 14:16:34	c56153825175: Preparing
build	23-Mar-2018 14:16:34	ae620432889d: Preparing
build	23-Mar-2018 14:16:34	a2022691bf95: Preparing
build	23-Mar-2018 14:16:34	0fbe2bcb1bf9: Waiting
build	23-Mar-2018 14:16:34	f96e6b25195f: Waiting
build	23-Mar-2018 14:16:34	59669fcdd5eb: Waiting
build	23-Mar-2018 14:16:34	c56153825175: Waiting
build	23-Mar-2018 14:16:34	ae620432889d: Waiting
build	23-Mar-2018 14:16:34	7f7a065d245a: Waiting
build	23-Mar-2018 14:16:34	a2022691bf95: Waiting
build	23-Mar-2018 14:16:35	0cdb02ac1d86: Layer already exists
build	23-Mar-2018 14:16:35	f2297bdfc824: Layer already exists
build	23-Mar-2018 14:16:35	c8cb9129a1f4: Layer already exists
build	23-Mar-2018 14:16:35	0e79a11ae6b6: Layer already exists
build	23-Mar-2018 14:16:35	3543093191ef: Layer already exists
build	23-Mar-2018 14:16:35	0fbe2bcb1bf9: Layer already exists
build	23-Mar-2018 14:16:35	59669fcdd5eb: Layer already exists
build	23-Mar-2018 14:16:35	7f7a065d245a: Layer already exists
build	23-Mar-2018 14:16:35	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:35	c56153825175: Layer already exists
build	23-Mar-2018 14:16:35	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:35	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:35	latest: digest: sha256:4569996f156e795c682a971f643b754f85a496e78097ad8513f2737d5197954e size: 2826
build	23-Mar-2018 14:16:36	Untagged: 14387:latest
build	23-Mar-2018 14:16:36	Sending build context to Docker daemon 67.07 kB
build	23-Mar-2018 14:16:36	
build	23-Mar-2018 14:16:36	Step 1/11 : FROM clowder/pyclowder:1
build	23-Mar-2018 14:16:36	 ---> d1a9e970ed30
build	23-Mar-2018 14:16:36	Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu>
build	23-Mar-2018 14:16:36	 ---> Using cache
build	23-Mar-2018 14:16:36	 ---> 95c36e1341c0
build	23-Mar-2018 14:16:36	Step 3/11 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.IsletExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Islet.py"
build	23-Mar-2018 14:16:36	 ---> Using cache
build	23-Mar-2018 14:16:36	 ---> c743636cd977
build	23-Mar-2018 14:16:36	Step 4/11 : USER root
build	23-Mar-2018 14:16:36	 ---> Using cache
build	23-Mar-2018 14:16:36	 ---> 7d5eb79cc5d7
build	23-Mar-2018 14:16:36	Step 5/11 : COPY requirements.txt /home/clowder/
build	23-Mar-2018 14:16:36	 ---> Using cache
build	23-Mar-2018 14:16:36	 ---> 60bdacf7f7db
build	23-Mar-2018 14:16:36	Step 6/11 : RUN pip install --upgrade pip
build	23-Mar-2018 14:16:36	 ---> Using cache
build	23-Mar-2018 14:16:36	 ---> c66abff40dfd
build	23-Mar-2018 14:16:36	Step 7/11 : RUN pip install -r /home/clowder/requirements.txt
build	23-Mar-2018 14:16:36	 ---> Using cache
build	23-Mar-2018 14:16:36	 ---> 9295a3a9ed79
build	23-Mar-2018 14:16:36	Step 8/11 : USER clowder
build	23-Mar-2018 14:16:36	 ---> Using cache
build	23-Mar-2018 14:16:36	 ---> f18ce40ae9c5
build	23-Mar-2018 14:16:36	Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/
build	23-Mar-2018 14:16:36	 ---> Using cache
build	23-Mar-2018 14:16:36	 ---> ba2a4e13dbde
build	23-Mar-2018 14:16:36	Step 10/11 : ENTRYPOINT /home/clowder/entrypoint.sh
build	23-Mar-2018 14:16:36	 ---> Using cache
build	23-Mar-2018 14:16:36	 ---> bb48801ad0bb
build	23-Mar-2018 14:16:36	Step 11/11 : CMD extractor
build	23-Mar-2018 14:16:36	 ---> Using cache
build	23-Mar-2018 14:16:36	 ---> 3b009a5673fd
build	23-Mar-2018 14:16:36	Successfully built 3b009a5673fd
build	23-Mar-2018 14:16:36	The push refers to a repository [docker.io/clowder/extractors-msc-islet]
build	23-Mar-2018 14:16:36	44687f7f5081: Preparing
build	23-Mar-2018 14:16:36	24cf52cfd87d: Preparing
build	23-Mar-2018 14:16:36	27230402bb5b: Preparing
build	23-Mar-2018 14:16:36	4e079163f01a: Preparing
build	23-Mar-2018 14:16:36	0cdb02ac1d86: Preparing
build	23-Mar-2018 14:16:36	f2297bdfc824: Preparing
build	23-Mar-2018 14:16:36	0fbe2bcb1bf9: Preparing
build	23-Mar-2018 14:16:36	59669fcdd5eb: Preparing
build	23-Mar-2018 14:16:36	7f7a065d245a: Preparing
build	23-Mar-2018 14:16:36	f96e6b25195f: Preparing
build	23-Mar-2018 14:16:36	c56153825175: Preparing
build	23-Mar-2018 14:16:36	ae620432889d: Preparing
build	23-Mar-2018 14:16:36	a2022691bf95: Preparing
build	23-Mar-2018 14:16:36	59669fcdd5eb: Waiting
build	23-Mar-2018 14:16:36	7f7a065d245a: Waiting
build	23-Mar-2018 14:16:36	f96e6b25195f: Waiting
build	23-Mar-2018 14:16:36	c56153825175: Waiting
build	23-Mar-2018 14:16:36	ae620432889d: Waiting
build	23-Mar-2018 14:16:36	a2022691bf95: Waiting
build	23-Mar-2018 14:16:36	f2297bdfc824: Waiting
build	23-Mar-2018 14:16:36	0fbe2bcb1bf9: Waiting
build	23-Mar-2018 14:16:36	0cdb02ac1d86: Layer already exists
build	23-Mar-2018 14:16:36	44687f7f5081: Layer already exists
build	23-Mar-2018 14:16:36	4e079163f01a: Layer already exists
build	23-Mar-2018 14:16:36	27230402bb5b: Layer already exists
build	23-Mar-2018 14:16:36	24cf52cfd87d: Layer already exists
build	23-Mar-2018 14:16:36	f2297bdfc824: Layer already exists
build	23-Mar-2018 14:16:36	0fbe2bcb1bf9: Layer already exists
build	23-Mar-2018 14:16:36	7f7a065d245a: Layer already exists
build	23-Mar-2018 14:16:36	59669fcdd5eb: Layer already exists
build	23-Mar-2018 14:16:36	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:36	c56153825175: Layer already exists
build	23-Mar-2018 14:16:37	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:37	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:37	browndog_v0.2.0: digest: sha256:47148bc597c9367c882158b5c622188b8182c676c90572ea737bc9cab9eced09 size: 3031
build	23-Mar-2018 14:16:38	The push refers to a repository [docker.io/clowder/extractors-msc-islet]
build	23-Mar-2018 14:16:38	44687f7f5081: Preparing
build	23-Mar-2018 14:16:38	24cf52cfd87d: Preparing
build	23-Mar-2018 14:16:38	27230402bb5b: Preparing
build	23-Mar-2018 14:16:38	4e079163f01a: Preparing
build	23-Mar-2018 14:16:38	0cdb02ac1d86: Preparing
build	23-Mar-2018 14:16:38	f2297bdfc824: Preparing
build	23-Mar-2018 14:16:38	0fbe2bcb1bf9: Preparing
build	23-Mar-2018 14:16:38	f2297bdfc824: Waiting
build	23-Mar-2018 14:16:38	59669fcdd5eb: Preparing
build	23-Mar-2018 14:16:38	7f7a065d245a: Preparing
build	23-Mar-2018 14:16:38	f96e6b25195f: Preparing
build	23-Mar-2018 14:16:38	0fbe2bcb1bf9: Waiting
build	23-Mar-2018 14:16:38	59669fcdd5eb: Waiting
build	23-Mar-2018 14:16:38	c56153825175: Preparing
build	23-Mar-2018 14:16:38	ae620432889d: Preparing
build	23-Mar-2018 14:16:38	a2022691bf95: Preparing
build	23-Mar-2018 14:16:38	f96e6b25195f: Waiting
build	23-Mar-2018 14:16:38	c56153825175: Waiting
build	23-Mar-2018 14:16:38	ae620432889d: Waiting
build	23-Mar-2018 14:16:38	a2022691bf95: Waiting
build	23-Mar-2018 14:16:38	0cdb02ac1d86: Layer already exists
build	23-Mar-2018 14:16:38	4e079163f01a: Layer already exists
build	23-Mar-2018 14:16:38	44687f7f5081: Layer already exists
build	23-Mar-2018 14:16:38	24cf52cfd87d: Layer already exists
build	23-Mar-2018 14:16:38	27230402bb5b: Layer already exists
build	23-Mar-2018 14:16:38	59669fcdd5eb: Layer already exists
build	23-Mar-2018 14:16:38	0fbe2bcb1bf9: Layer already exists
build	23-Mar-2018 14:16:38	f2297bdfc824: Layer already exists
build	23-Mar-2018 14:16:38	7f7a065d245a: Layer already exists
build	23-Mar-2018 14:16:38	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:38	c56153825175: Layer already exists
build	23-Mar-2018 14:16:38	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:39	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:39	browndog_v0.3.0: digest: sha256:47148bc597c9367c882158b5c622188b8182c676c90572ea737bc9cab9eced09 size: 3031
build	23-Mar-2018 14:16:39	The push refers to a repository [docker.io/clowder/extractors-msc-islet]
build	23-Mar-2018 14:16:39	44687f7f5081: Preparing
build	23-Mar-2018 14:16:39	24cf52cfd87d: Preparing
build	23-Mar-2018 14:16:39	27230402bb5b: Preparing
build	23-Mar-2018 14:16:39	4e079163f01a: Preparing
build	23-Mar-2018 14:16:39	0cdb02ac1d86: Preparing
build	23-Mar-2018 14:16:39	f2297bdfc824: Preparing
build	23-Mar-2018 14:16:39	0fbe2bcb1bf9: Preparing
build	23-Mar-2018 14:16:39	59669fcdd5eb: Preparing
build	23-Mar-2018 14:16:39	7f7a065d245a: Preparing
build	23-Mar-2018 14:16:39	f96e6b25195f: Preparing
build	23-Mar-2018 14:16:39	c56153825175: Preparing
build	23-Mar-2018 14:16:39	ae620432889d: Preparing
build	23-Mar-2018 14:16:39	a2022691bf95: Preparing
build	23-Mar-2018 14:16:39	59669fcdd5eb: Waiting
build	23-Mar-2018 14:16:39	c56153825175: Waiting
build	23-Mar-2018 14:16:39	7f7a065d245a: Waiting
build	23-Mar-2018 14:16:39	ae620432889d: Waiting
build	23-Mar-2018 14:16:39	f96e6b25195f: Waiting
build	23-Mar-2018 14:16:39	a2022691bf95: Waiting
build	23-Mar-2018 14:16:39	f2297bdfc824: Waiting
build	23-Mar-2018 14:16:39	0fbe2bcb1bf9: Waiting
build	23-Mar-2018 14:16:40	27230402bb5b: Layer already exists
build	23-Mar-2018 14:16:40	0cdb02ac1d86: Layer already exists
build	23-Mar-2018 14:16:40	24cf52cfd87d: Layer already exists
build	23-Mar-2018 14:16:40	44687f7f5081: Layer already exists
build	23-Mar-2018 14:16:40	4e079163f01a: Layer already exists
build	23-Mar-2018 14:16:40	f2297bdfc824: Layer already exists
build	23-Mar-2018 14:16:40	59669fcdd5eb: Layer already exists
build	23-Mar-2018 14:16:40	0fbe2bcb1bf9: Layer already exists
build	23-Mar-2018 14:16:40	7f7a065d245a: Layer already exists
build	23-Mar-2018 14:16:40	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:40	c56153825175: Layer already exists
build	23-Mar-2018 14:16:40	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:40	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:41	latest: digest: sha256:47148bc597c9367c882158b5c622188b8182c676c90572ea737bc9cab9eced09 size: 3031
build	23-Mar-2018 14:16:41	Untagged: 14387:latest
build	23-Mar-2018 14:16:41	Sending build context to Docker daemon 66.05 kB
build	23-Mar-2018 14:16:41	
build	23-Mar-2018 14:16:41	Step 1/11 : FROM clowder/pyclowder:1
build	23-Mar-2018 14:16:41	 ---> d1a9e970ed30
build	23-Mar-2018 14:16:41	Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu>
build	23-Mar-2018 14:16:41	 ---> Using cache
build	23-Mar-2018 14:16:41	 ---> 95c36e1341c0
build	23-Mar-2018 14:16:41	Step 3/11 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.ChemCBCExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Chem.py"
build	23-Mar-2018 14:16:41	 ---> Using cache
build	23-Mar-2018 14:16:41	 ---> d9c601ede78c
build	23-Mar-2018 14:16:41	Step 4/11 : USER root
build	23-Mar-2018 14:16:41	 ---> Using cache
build	23-Mar-2018 14:16:41	 ---> 5afbb6c8481b
build	23-Mar-2018 14:16:41	Step 5/11 : COPY requirements.txt /home/clowder/
build	23-Mar-2018 14:16:41	 ---> Using cache
build	23-Mar-2018 14:16:41	 ---> a8f43ae85449
build	23-Mar-2018 14:16:41	Step 6/11 : RUN pip install --upgrade pip
build	23-Mar-2018 14:16:41	 ---> Using cache
build	23-Mar-2018 14:16:41	 ---> f82e9971fcb7
build	23-Mar-2018 14:16:41	Step 7/11 : RUN pip install -r /home/clowder/requirements.txt
build	23-Mar-2018 14:16:41	 ---> Using cache
build	23-Mar-2018 14:16:41	 ---> 2544848d0a9a
build	23-Mar-2018 14:16:41	Step 8/11 : USER clowder
build	23-Mar-2018 14:16:41	 ---> Using cache
build	23-Mar-2018 14:16:41	 ---> e81573fd067d
build	23-Mar-2018 14:16:41	Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/
build	23-Mar-2018 14:16:41	 ---> Using cache
build	23-Mar-2018 14:16:41	 ---> bf0d954a532e
build	23-Mar-2018 14:16:41	Step 10/11 : ENTRYPOINT /home/clowder/entrypoint.sh
build	23-Mar-2018 14:16:41	 ---> Using cache
build	23-Mar-2018 14:16:41	 ---> a3ad92594e70
build	23-Mar-2018 14:16:41	Step 11/11 : CMD extractor
build	23-Mar-2018 14:16:41	 ---> Using cache
build	23-Mar-2018 14:16:41	 ---> 74dba2ae3af3
build	23-Mar-2018 14:16:41	Successfully built 74dba2ae3af3
build	23-Mar-2018 14:16:41	The push refers to a repository [docker.io/clowder/extractors-msc-chemcbc]
build	23-Mar-2018 14:16:41	0672cb628e73: Preparing
build	23-Mar-2018 14:16:41	6e0b68f3a11e: Preparing
build	23-Mar-2018 14:16:41	9301a9f98473: Preparing
build	23-Mar-2018 14:16:41	f928fa89dd53: Preparing
build	23-Mar-2018 14:16:41	0cdb02ac1d86: Preparing
build	23-Mar-2018 14:16:41	f2297bdfc824: Preparing
build	23-Mar-2018 14:16:41	0fbe2bcb1bf9: Preparing
build	23-Mar-2018 14:16:41	59669fcdd5eb: Preparing
build	23-Mar-2018 14:16:41	7f7a065d245a: Preparing
build	23-Mar-2018 14:16:41	f96e6b25195f: Preparing
build	23-Mar-2018 14:16:41	c56153825175: Preparing
build	23-Mar-2018 14:16:41	f2297bdfc824: Waiting
build	23-Mar-2018 14:16:41	ae620432889d: Preparing
build	23-Mar-2018 14:16:41	a2022691bf95: Preparing
build	23-Mar-2018 14:16:41	59669fcdd5eb: Waiting
build	23-Mar-2018 14:16:41	ae620432889d: Waiting
build	23-Mar-2018 14:16:41	a2022691bf95: Waiting
build	23-Mar-2018 14:16:41	c56153825175: Waiting
build	23-Mar-2018 14:16:41	7f7a065d245a: Waiting
build	23-Mar-2018 14:16:41	0cdb02ac1d86: Layer already exists
build	23-Mar-2018 14:16:41	f928fa89dd53: Layer already exists
build	23-Mar-2018 14:16:41	0672cb628e73: Layer already exists
build	23-Mar-2018 14:16:41	6e0b68f3a11e: Layer already exists
build	23-Mar-2018 14:16:41	f2297bdfc824: Layer already exists
build	23-Mar-2018 14:16:41	9301a9f98473: Layer already exists
build	23-Mar-2018 14:16:41	0fbe2bcb1bf9: Layer already exists
build	23-Mar-2018 14:16:41	59669fcdd5eb: Layer already exists
build	23-Mar-2018 14:16:41	7f7a065d245a: Layer already exists
build	23-Mar-2018 14:16:41	c56153825175: Layer already exists
build	23-Mar-2018 14:16:41	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:42	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:42	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:42	browndog_v0.2.0: digest: sha256:b9c813a75801d726cf94a29f8266e1ca1708de6545d0af7c737682f6d1199dba size: 3031
build	23-Mar-2018 14:16:42	The push refers to a repository [docker.io/clowder/extractors-msc-chemcbc]
build	23-Mar-2018 14:16:42	0672cb628e73: Preparing
build	23-Mar-2018 14:16:42	6e0b68f3a11e: Preparing
build	23-Mar-2018 14:16:42	9301a9f98473: Preparing
build	23-Mar-2018 14:16:42	f928fa89dd53: Preparing
build	23-Mar-2018 14:16:42	0cdb02ac1d86: Preparing
build	23-Mar-2018 14:16:42	f2297bdfc824: Preparing
build	23-Mar-2018 14:16:42	0fbe2bcb1bf9: Preparing
build	23-Mar-2018 14:16:42	59669fcdd5eb: Preparing
build	23-Mar-2018 14:16:42	7f7a065d245a: Preparing
build	23-Mar-2018 14:16:42	f96e6b25195f: Preparing
build	23-Mar-2018 14:16:42	c56153825175: Preparing
build	23-Mar-2018 14:16:42	ae620432889d: Preparing
build	23-Mar-2018 14:16:42	a2022691bf95: Preparing
build	23-Mar-2018 14:16:42	f96e6b25195f: Waiting
build	23-Mar-2018 14:16:42	c56153825175: Waiting
build	23-Mar-2018 14:16:42	f2297bdfc824: Waiting
build	23-Mar-2018 14:16:42	ae620432889d: Waiting
build	23-Mar-2018 14:16:42	a2022691bf95: Waiting
build	23-Mar-2018 14:16:42	0fbe2bcb1bf9: Waiting
build	23-Mar-2018 14:16:42	59669fcdd5eb: Waiting
build	23-Mar-2018 14:16:42	7f7a065d245a: Waiting
build	23-Mar-2018 14:16:43	0cdb02ac1d86: Layer already exists
build	23-Mar-2018 14:16:43	0672cb628e73: Layer already exists
build	23-Mar-2018 14:16:43	6e0b68f3a11e: Layer already exists
build	23-Mar-2018 14:16:43	f928fa89dd53: Layer already exists
build	23-Mar-2018 14:16:43	9301a9f98473: Layer already exists
build	23-Mar-2018 14:16:43	f2297bdfc824: Layer already exists
build	23-Mar-2018 14:16:43	7f7a065d245a: Layer already exists
build	23-Mar-2018 14:16:43	59669fcdd5eb: Layer already exists
build	23-Mar-2018 14:16:43	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:43	0fbe2bcb1bf9: Layer already exists
build	23-Mar-2018 14:16:43	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:43	c56153825175: Layer already exists
build	23-Mar-2018 14:16:43	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:43	browndog_v0.3.0: digest: sha256:b9c813a75801d726cf94a29f8266e1ca1708de6545d0af7c737682f6d1199dba size: 3031
build	23-Mar-2018 14:16:44	The push refers to a repository [docker.io/clowder/extractors-msc-chemcbc]
build	23-Mar-2018 14:16:44	0672cb628e73: Preparing
build	23-Mar-2018 14:16:44	6e0b68f3a11e: Preparing
build	23-Mar-2018 14:16:44	9301a9f98473: Preparing
build	23-Mar-2018 14:16:44	f928fa89dd53: Preparing
build	23-Mar-2018 14:16:44	0cdb02ac1d86: Preparing
build	23-Mar-2018 14:16:44	f2297bdfc824: Preparing
build	23-Mar-2018 14:16:44	0fbe2bcb1bf9: Preparing
build	23-Mar-2018 14:16:44	59669fcdd5eb: Preparing
build	23-Mar-2018 14:16:44	7f7a065d245a: Preparing
build	23-Mar-2018 14:16:44	f96e6b25195f: Preparing
build	23-Mar-2018 14:16:44	c56153825175: Preparing
build	23-Mar-2018 14:16:44	ae620432889d: Preparing
build	23-Mar-2018 14:16:44	a2022691bf95: Preparing
build	23-Mar-2018 14:16:44	0fbe2bcb1bf9: Waiting
build	23-Mar-2018 14:16:44	59669fcdd5eb: Waiting
build	23-Mar-2018 14:16:44	7f7a065d245a: Waiting
build	23-Mar-2018 14:16:44	f96e6b25195f: Waiting
build	23-Mar-2018 14:16:44	c56153825175: Waiting
build	23-Mar-2018 14:16:44	ae620432889d: Waiting
build	23-Mar-2018 14:16:44	a2022691bf95: Waiting
build	23-Mar-2018 14:16:44	f2297bdfc824: Waiting
build	23-Mar-2018 14:16:44	0cdb02ac1d86: Layer already exists
build	23-Mar-2018 14:16:44	f928fa89dd53: Layer already exists
build	23-Mar-2018 14:16:44	6e0b68f3a11e: Layer already exists
build	23-Mar-2018 14:16:44	0672cb628e73: Layer already exists
build	23-Mar-2018 14:16:44	9301a9f98473: Layer already exists
build	23-Mar-2018 14:16:44	f2297bdfc824: Layer already exists
build	23-Mar-2018 14:16:44	59669fcdd5eb: Layer already exists
build	23-Mar-2018 14:16:44	7f7a065d245a: Layer already exists
build	23-Mar-2018 14:16:44	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:44	0fbe2bcb1bf9: Layer already exists
build	23-Mar-2018 14:16:44	c56153825175: Layer already exists
build	23-Mar-2018 14:16:44	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:45	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:45	latest: digest: sha256:b9c813a75801d726cf94a29f8266e1ca1708de6545d0af7c737682f6d1199dba size: 3031
build	23-Mar-2018 14:16:45	Untagged: 14387:latest
build	23-Mar-2018 14:16:45	Sending build context to Docker daemon 198.1 kB
build	23-Mar-2018 14:16:45	
build	23-Mar-2018 14:16:45	Step 1/11 : FROM clowder/pyclowder:1
build	23-Mar-2018 14:16:45	 ---> d1a9e970ed30
build	23-Mar-2018 14:16:45	Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu>
build	23-Mar-2018 14:16:45	 ---> Using cache
build	23-Mar-2018 14:16:45	 ---> 95c36e1341c0
build	23-Mar-2018 14:16:45	Step 3/11 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.MonitorExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Monitor.py"
build	23-Mar-2018 14:16:45	 ---> Using cache
build	23-Mar-2018 14:16:45	 ---> 54973135d069
build	23-Mar-2018 14:16:45	Step 4/11 : USER root
build	23-Mar-2018 14:16:45	 ---> Using cache
build	23-Mar-2018 14:16:45	 ---> d745b5b5d902
build	23-Mar-2018 14:16:45	Step 5/11 : COPY requirements.txt /home/clowder/
build	23-Mar-2018 14:16:45	 ---> Using cache
build	23-Mar-2018 14:16:45	 ---> ea1969fa6879
build	23-Mar-2018 14:16:45	Step 6/11 : RUN pip install --upgrade pip
build	23-Mar-2018 14:16:45	 ---> Using cache
build	23-Mar-2018 14:16:45	 ---> 5c17be3d0c0b
build	23-Mar-2018 14:16:45	Step 7/11 : RUN pip install -r /home/clowder/requirements.txt
build	23-Mar-2018 14:16:45	 ---> Using cache
build	23-Mar-2018 14:16:45	 ---> 007862a8cf1b
build	23-Mar-2018 14:16:45	Step 8/11 : USER clowder
build	23-Mar-2018 14:16:45	 ---> Using cache
build	23-Mar-2018 14:16:45	 ---> 5ba2fceade97
build	23-Mar-2018 14:16:45	Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/
build	23-Mar-2018 14:16:45	 ---> Using cache
build	23-Mar-2018 14:16:45	 ---> d8bc2b09b30f
build	23-Mar-2018 14:16:45	Step 10/11 : ENTRYPOINT /home/clowder/entrypoint.sh
build	23-Mar-2018 14:16:45	 ---> Using cache
build	23-Mar-2018 14:16:45	 ---> a6731dbaeafe
build	23-Mar-2018 14:16:45	Step 11/11 : CMD extractor
build	23-Mar-2018 14:16:45	 ---> Using cache
build	23-Mar-2018 14:16:45	 ---> eb9ac109d2ff
build	23-Mar-2018 14:16:45	Successfully built eb9ac109d2ff
build	23-Mar-2018 14:16:45	The push refers to a repository [docker.io/clowder/extractors-msc-monitor]
build	23-Mar-2018 14:16:45	ed92e5cb33ab: Preparing
build	23-Mar-2018 14:16:45	60ede1fb2a8a: Preparing
build	23-Mar-2018 14:16:45	febb8bdc4437: Preparing
build	23-Mar-2018 14:16:45	0334fab2f1cf: Preparing
build	23-Mar-2018 14:16:45	0cdb02ac1d86: Preparing
build	23-Mar-2018 14:16:45	f2297bdfc824: Preparing
build	23-Mar-2018 14:16:45	0fbe2bcb1bf9: Preparing
build	23-Mar-2018 14:16:45	59669fcdd5eb: Preparing
build	23-Mar-2018 14:16:45	7f7a065d245a: Preparing
build	23-Mar-2018 14:16:45	f96e6b25195f: Preparing
build	23-Mar-2018 14:16:45	c56153825175: Preparing
build	23-Mar-2018 14:16:45	ae620432889d: Preparing
build	23-Mar-2018 14:16:45	a2022691bf95: Preparing
build	23-Mar-2018 14:16:45	7f7a065d245a: Waiting
build	23-Mar-2018 14:16:45	f96e6b25195f: Waiting
build	23-Mar-2018 14:16:45	c56153825175: Waiting
build	23-Mar-2018 14:16:45	ae620432889d: Waiting
build	23-Mar-2018 14:16:45	a2022691bf95: Waiting
build	23-Mar-2018 14:16:45	59669fcdd5eb: Waiting
build	23-Mar-2018 14:16:45	0fbe2bcb1bf9: Waiting
build	23-Mar-2018 14:16:45	f2297bdfc824: Waiting
build	23-Mar-2018 14:16:46	0cdb02ac1d86: Layer already exists
build	23-Mar-2018 14:16:46	febb8bdc4437: Layer already exists
build	23-Mar-2018 14:16:46	f2297bdfc824: Layer already exists
build	23-Mar-2018 14:16:46	ed92e5cb33ab: Layer already exists
build	23-Mar-2018 14:16:46	0334fab2f1cf: Layer already exists
build	23-Mar-2018 14:16:46	0fbe2bcb1bf9: Layer already exists
build	23-Mar-2018 14:16:46	59669fcdd5eb: Layer already exists
build	23-Mar-2018 14:16:46	7f7a065d245a: Layer already exists
build	23-Mar-2018 14:16:46	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:46	c56153825175: Layer already exists
build	23-Mar-2018 14:16:46	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:46	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:48	60ede1fb2a8a: Layer already exists
build	23-Mar-2018 14:16:49	browndog_v0.2.0: digest: sha256:47e23e0af3157d9f351c253834ab4ed60846325da8b80d2e5698db20dc7d0211 size: 3031
build	23-Mar-2018 14:16:49	The push refers to a repository [docker.io/clowder/extractors-msc-monitor]
build	23-Mar-2018 14:16:49	ed92e5cb33ab: Preparing
build	23-Mar-2018 14:16:49	60ede1fb2a8a: Preparing
build	23-Mar-2018 14:16:49	febb8bdc4437: Preparing
build	23-Mar-2018 14:16:49	0334fab2f1cf: Preparing
build	23-Mar-2018 14:16:49	0cdb02ac1d86: Preparing
build	23-Mar-2018 14:16:49	f2297bdfc824: Preparing
build	23-Mar-2018 14:16:49	0fbe2bcb1bf9: Preparing
build	23-Mar-2018 14:16:49	59669fcdd5eb: Preparing
build	23-Mar-2018 14:16:49	7f7a065d245a: Preparing
build	23-Mar-2018 14:16:49	f2297bdfc824: Waiting
build	23-Mar-2018 14:16:49	0fbe2bcb1bf9: Waiting
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build	23-Mar-2018 14:16:49	a2022691bf95: Preparing
build	23-Mar-2018 14:16:49	ae620432889d: Waiting
build	23-Mar-2018 14:16:49	a2022691bf95: Waiting
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build	23-Mar-2018 14:16:49	59669fcdd5eb: Layer already exists
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build	23-Mar-2018 14:16:50	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:50	c56153825175: Layer already exists
build	23-Mar-2018 14:16:50	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:50	browndog_v0.3.0: digest: sha256:47e23e0af3157d9f351c253834ab4ed60846325da8b80d2e5698db20dc7d0211 size: 3031
build	23-Mar-2018 14:16:50	The push refers to a repository [docker.io/clowder/extractors-msc-monitor]
build	23-Mar-2018 14:16:50	ed92e5cb33ab: Preparing
build	23-Mar-2018 14:16:50	60ede1fb2a8a: Preparing
build	23-Mar-2018 14:16:50	febb8bdc4437: Preparing
build	23-Mar-2018 14:16:50	0334fab2f1cf: Preparing
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build	23-Mar-2018 14:16:50	ae620432889d: Preparing
build	23-Mar-2018 14:16:50	a2022691bf95: Preparing
build	23-Mar-2018 14:16:50	f2297bdfc824: Waiting
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build	23-Mar-2018 14:16:50	59669fcdd5eb: Waiting
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build	23-Mar-2018 14:16:51	59669fcdd5eb: Layer already exists
build	23-Mar-2018 14:16:51	c56153825175: Layer already exists
build	23-Mar-2018 14:16:51	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:51	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:51	latest: digest: sha256:47e23e0af3157d9f351c253834ab4ed60846325da8b80d2e5698db20dc7d0211 size: 3031
build	23-Mar-2018 14:16:52	Untagged: 14387:latest
build	23-Mar-2018 14:16:52	Sending build context to Docker daemon  12.1 MB
build	23-Mar-2018 14:16:52	
build	23-Mar-2018 14:16:52	Step 1/11 : FROM clowder/pyclowder:1
build	23-Mar-2018 14:16:52	 ---> d1a9e970ed30
build	23-Mar-2018 14:16:52	Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu>
build	23-Mar-2018 14:16:52	 ---> Using cache
build	23-Mar-2018 14:16:52	 ---> 95c36e1341c0
build	23-Mar-2018 14:16:52	Step 3/11 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.PhenotypeExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Phenotype.py"
build	23-Mar-2018 14:16:52	 ---> Using cache
build	23-Mar-2018 14:16:52	 ---> db39494c9783
build	23-Mar-2018 14:16:52	Step 4/11 : USER root
build	23-Mar-2018 14:16:52	 ---> Using cache
build	23-Mar-2018 14:16:52	 ---> b739392e4533
build	23-Mar-2018 14:16:52	Step 5/11 : COPY requirements.txt /home/clowder/
build	23-Mar-2018 14:16:52	 ---> Using cache
build	23-Mar-2018 14:16:52	 ---> cc4b4872c39c
build	23-Mar-2018 14:16:52	Step 6/11 : RUN pip install --upgrade pip
build	23-Mar-2018 14:16:52	 ---> Using cache
build	23-Mar-2018 14:16:52	 ---> c6c3ada9c712
build	23-Mar-2018 14:16:52	Step 7/11 : RUN pip install -r /home/clowder/requirements.txt
build	23-Mar-2018 14:16:52	 ---> Using cache
build	23-Mar-2018 14:16:52	 ---> e9ca28db6010
build	23-Mar-2018 14:16:52	Step 8/11 : USER clowder
build	23-Mar-2018 14:16:52	 ---> Using cache
build	23-Mar-2018 14:16:52	 ---> a6a402d64e8c
build	23-Mar-2018 14:16:52	Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/
build	23-Mar-2018 14:16:52	 ---> Using cache
build	23-Mar-2018 14:16:52	 ---> 710e4b23b6d7
build	23-Mar-2018 14:16:52	Step 10/11 : ENTRYPOINT /home/clowder/entrypoint.sh
build	23-Mar-2018 14:16:52	 ---> Using cache
build	23-Mar-2018 14:16:52	 ---> 4dca45ac6a64
build	23-Mar-2018 14:16:52	Step 11/11 : CMD extractor
build	23-Mar-2018 14:16:52	 ---> Using cache
build	23-Mar-2018 14:16:52	 ---> 7feb97bb3ef5
build	23-Mar-2018 14:16:53	Successfully built 7feb97bb3ef5
build	23-Mar-2018 14:16:53	The push refers to a repository [docker.io/clowder/extractors-msc-phenotype]
build	23-Mar-2018 14:16:53	c96d4277e65f: Preparing
build	23-Mar-2018 14:16:53	47b44d3905b3: Preparing
build	23-Mar-2018 14:16:53	71513dca0b72: Preparing
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build	23-Mar-2018 14:16:53	f2297bdfc824: Waiting
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build	23-Mar-2018 14:16:54	71513dca0b72: Layer already exists
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build	23-Mar-2018 14:16:54	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:54	c56153825175: Layer already exists
build	23-Mar-2018 14:16:54	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:54	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:56	browndog_v0.2.0: digest: sha256:34e500f77ac67683ceb18462d2fe4b2ba3d72bdac5abe635a219d2cf062b41b3 size: 3031
build	23-Mar-2018 14:16:56	The push refers to a repository [docker.io/clowder/extractors-msc-phenotype]
build	23-Mar-2018 14:16:56	c96d4277e65f: Preparing
build	23-Mar-2018 14:16:56	47b44d3905b3: Preparing
build	23-Mar-2018 14:16:56	71513dca0b72: Preparing
build	23-Mar-2018 14:16:56	2a4defffaad8: Preparing
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build	23-Mar-2018 14:16:56	a2022691bf95: Preparing
build	23-Mar-2018 14:16:56	7f7a065d245a: Waiting
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build	23-Mar-2018 14:16:56	71513dca0b72: Layer already exists
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build	23-Mar-2018 14:16:56	f96e6b25195f: Layer already exists
build	23-Mar-2018 14:16:56	c56153825175: Layer already exists
build	23-Mar-2018 14:16:56	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:57	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:57	browndog_v0.3.0: digest: sha256:34e500f77ac67683ceb18462d2fe4b2ba3d72bdac5abe635a219d2cf062b41b3 size: 3031
build	23-Mar-2018 14:16:57	The push refers to a repository [docker.io/clowder/extractors-msc-phenotype]
build	23-Mar-2018 14:16:57	c96d4277e65f: Preparing
build	23-Mar-2018 14:16:57	47b44d3905b3: Preparing
build	23-Mar-2018 14:16:57	71513dca0b72: Preparing
build	23-Mar-2018 14:16:57	2a4defffaad8: Preparing
build	23-Mar-2018 14:16:57	0cdb02ac1d86: Preparing
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build	23-Mar-2018 14:16:57	0fbe2bcb1bf9: Preparing
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build	23-Mar-2018 14:16:57	f96e6b25195f: Preparing
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build	23-Mar-2018 14:16:57	a2022691bf95: Preparing
build	23-Mar-2018 14:16:57	7f7a065d245a: Waiting
build	23-Mar-2018 14:16:57	f96e6b25195f: Waiting
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build	23-Mar-2018 14:16:58	ae620432889d: Layer already exists
build	23-Mar-2018 14:16:58	a2022691bf95: Layer already exists
build	23-Mar-2018 14:16:58	latest: digest: sha256:34e500f77ac67683ceb18462d2fe4b2ba3d72bdac5abe635a219d2cf062b41b3 size: 3031
build	23-Mar-2018 14:16:58	Untagged: 14387:latest
simple	23-Mar-2018 14:16:58	Finished task 'docker build' with result: Success
simple	23-Mar-2018 14:16:58	Running post build plugin 'Docker Container Cleanup'
simple	23-Mar-2018 14:16:58	Running post build plugin 'NCover Results Collector'
simple	23-Mar-2018 14:16:58	Running post build plugin 'Clover Results Collector'
simple	23-Mar-2018 14:16:58	Running post build plugin 'npm Cache Cleanup'
simple	23-Mar-2018 14:16:58	Running post build plugin 'Artifact Copier'
simple	23-Mar-2018 14:16:58	Finalising the build...
simple	23-Mar-2018 14:16:58	Stopping timer.
simple	23-Mar-2018 14:16:58	Build CATS-MSC-JOB1-34 completed.
simple	23-Mar-2018 14:16:58	Running on server: post build plugin 'NCover Results Collector'
simple	23-Mar-2018 14:16:58	Running on server: post build plugin 'Build Hanging Detection Configuration'
simple	23-Mar-2018 14:16:58	Running on server: post build plugin 'Clover Delta Calculator'
simple	23-Mar-2018 14:16:58	Running on server: post build plugin 'Maven Dependencies Postprocessor'
simple	23-Mar-2018 14:16:58	All post build plugins have finished
simple	23-Mar-2018 14:16:58	Generating build results summary...
simple	23-Mar-2018 14:16:58	Saving build results to disk...
simple	23-Mar-2018 14:16:58	Logging substituted variables...
simple	23-Mar-2018 14:16:58	Indexing build results...
simple	23-Mar-2018 14:16:58	Finished building CATS-MSC-JOB1-34.