simple	18-Apr-2018 21:44:27	Build Clowder - extractors-msc - Default Job #36 (CATS-MSC-JOB1-36) started building on agent buildserver-1.os.ncsa.edu
simple	18-Apr-2018 21:44:27	Remote agent on host buildserver-1.os.ncsa.edu
simple	18-Apr-2018 21:44:27	Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1
simple	18-Apr-2018 21:44:27	Executing build Clowder - extractors-msc - Default Job #36 (CATS-MSC-JOB1-36)
simple	18-Apr-2018 21:44:27	Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
simple	18-Apr-2018 21:44:27	Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1
simple	18-Apr-2018 21:44:27	Updating source code to revision: 6aaab3692bc88bb1c0016521723c45399615c5f2
simple	18-Apr-2018 21:44:27	Fetching 'refs/heads/master' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git'. Will try to do a shallow fetch.
simple	18-Apr-2018 21:44:27	Warning: Permanently added '[127.0.0.1]:34990' (RSA) to the list of known hosts.
simple	18-Apr-2018 21:44:27	Checking out revision 6aaab3692bc88bb1c0016521723c45399615c5f2.
simple	18-Apr-2018 21:44:27	Already on 'master'
simple	18-Apr-2018 21:44:27	Updated source code to revision: 6aaab3692bc88bb1c0016521723c45399615c5f2
simple	18-Apr-2018 21:44:27	Finished task 'Checkout Default Repository' with result: Success
simple	18-Apr-2018 21:44:27	Running pre-build action: VCS Version Collector
simple	18-Apr-2018 21:44:27	Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
command	18-Apr-2018 21:44:27	Beginning to execute external process for build 'Clowder - extractors-msc - Default Job #36 (CATS-MSC-JOB1-36)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=master\nbamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm\nbamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster\nbamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node\nbamboo_dependency_parent_0=CATS-PYC2-71\nbamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster\nbamboo_dependency_parent_total=1\nbamboo_planRepository_1_branchDisplayName=master\nbamboo_repository_revision_number=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-MSC-JOB1-36\nbamboo_repository_127172627_branch_name=master\nbamboo_repository_127172627_git_branch=master\nbamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build\nbamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1\nbamboo_planRepository_1_name=extractors-msc\nbamboo_buildKey=CATS-MSC-JOB1\nbamboo_capability_system_os=linux\nbamboo_shortPlanName=extractors-msc\nbamboo_planRepository_name=extractors-msc\nbamboo_repository_127172627_git_username=\nbamboo_buildNumber=36\nbamboo_shortJobName=Default Job\nbamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-MSC-JOB1-36\nbamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_agentId=140673027\nbamboo_planName=Clowder - extractors-msc\nbamboo_repository_127172627_revision_number=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_shortPlanKey=MSC\nbamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt\nbamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node\nbamboo_shortJobKey=JOB1\nbamboo_planRepository_revision=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_buildTimeStamp=2018-04-18T21:15:51.782-05:00\nbamboo_repository_previous_revision_number=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm\nbamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1\nbamboo_planRepository_previousRevision=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_repository_git_branch=master\nbamboo_buildResultKey=CATS-MSC-JOB1-36\nbamboo_repository_branch_name=master\nbamboo_buildPlanName=Clowder - extractors-msc - Default Job\nbamboo_planRepository_1_revision=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_capability_system_builder_command_python3=/usr/bin/python3\nbamboo_repository_name=extractors-msc\nbamboo_buildFailed=false\nbamboo_capability_system_docker_executable=/usr/bin/docker\nbamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt\nbamboo_planRepository_branch=master\nbamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/usr/bin/git\nbamboo_repository_git_username=\nbamboo_planRepository_1_previousRevision=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13\nbamboo_repository_127172627_name=extractors-msc\nbamboo_planRepository_branchDisplayName=master\nbamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs\nbamboo_planRepository_1_type=bbserver\nbamboo_planRepository_branchName=master\nbamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7\nbamboo_capability_system_hostname=buildserver-1\nbamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_software_mongo=/usr/bin/mongo\nbamboo_plan_storageTag=plan-126976035\nbamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs\nbamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl\nbamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=bbserver\nbamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache\nbamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_repository_127172627_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node\nbamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4\nbamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9\nbamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp\nbamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1\nbamboo_planKey=CATS-MSC\nbamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_planRepository_username=\nbamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41\nbamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh\nbamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60\nbamboo_repository_127172627_previous_revision_number=6aaab3692bc88bb1c0016521723c45399615c5f2\nbamboo_planRepository_1_branchName=master\n
build	18-Apr-2018 21:44:27	Sending build context to Docker daemon  2.284MB
build	18-Apr-2018 21:44:27	
build	18-Apr-2018 21:44:27	Step 1/11 : FROM clowder/pyclowder:1
build	18-Apr-2018 21:44:27	 ---> d1a9e970ed30
build	18-Apr-2018 21:44:27	Step 2/11 : MAINTAINER Rob Kooper <kooper@illinois.edu>
build	18-Apr-2018 21:44:27	 ---> Using cache
build	18-Apr-2018 21:44:27	 ---> 199b32438235
build	18-Apr-2018 21:44:27	Step 3/11 : VOLUME /matlab
build	18-Apr-2018 21:44:27	 ---> Using cache
build	18-Apr-2018 21:44:27	 ---> 7fada06ede8a
build	18-Apr-2018 21:44:27	Step 4/11 : ENV RABBITMQ_URI=""     RABBITMQ_EXCHANGE="clowder"     RABBITMQ_VHOST="%2F"     RABBITMQ_QUEUE="ncsa.msc.diagnosis"     MATLAB_BINARY="/matlab/bin/matlab"     MAIN_SCRIPT="diagnosis.py"
build	18-Apr-2018 21:44:27	 ---> Using cache
build	18-Apr-2018 21:44:27	 ---> 16acceb9cc21
build	18-Apr-2018 21:44:27	Step 5/11 : USER root
build	18-Apr-2018 21:44:27	 ---> Using cache
build	18-Apr-2018 21:44:27	 ---> b37ef4634ddb
build	18-Apr-2018 21:44:27	Step 6/11 : RUN pip install --upgrade pip
build	18-Apr-2018 21:44:27	 ---> Using cache
build	18-Apr-2018 21:44:27	 ---> 7821086222d9
build	18-Apr-2018 21:44:27	Step 7/11 : RUN apt-get -qq -y update && apt-get -y install         libxext6         libxmu6         libxt6         wget     && mkdir -p /matlab     && rm -rf /var/lib/apt/lists/*
build	18-Apr-2018 21:44:27	 ---> Using cache
build	18-Apr-2018 21:44:27	 ---> 3b85732d8c98
build	18-Apr-2018 21:44:27	Step 8/11 : USER clowder
build	18-Apr-2018 21:44:27	 ---> Using cache
build	18-Apr-2018 21:44:27	 ---> d80b9bd311d3
build	18-Apr-2018 21:44:27	Step 9/11 : COPY entrypoint.sh *.py *.m data/*.mat *.json /home/clowder/
build	18-Apr-2018 21:44:27	 ---> Using cache
build	18-Apr-2018 21:44:27	 ---> 8b415eba15fc
build	18-Apr-2018 21:44:27	Step 10/11 : ENTRYPOINT ["/home/clowder/entrypoint.sh"]
build	18-Apr-2018 21:44:27	 ---> Using cache
build	18-Apr-2018 21:44:27	 ---> 492d3d285daa
build	18-Apr-2018 21:44:27	Step 11/11 : CMD ["extractor"]
build	18-Apr-2018 21:44:27	 ---> Using cache
build	18-Apr-2018 21:44:27	 ---> 48c1c411b9b7
build	18-Apr-2018 21:44:27	Successfully built 48c1c411b9b7
build	18-Apr-2018 21:44:27	Successfully tagged 22210:latest
build	18-Apr-2018 21:44:28	The push refers to repository [docker.io/clowder/extractors-msc-kidney]
build	18-Apr-2018 21:44:28	a2ffe2e4f347: Preparing
build	18-Apr-2018 21:44:28	41c6ef0756f7: Preparing
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build	18-Apr-2018 21:44:28	0fbe2bcb1bf9: Waiting
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build	18-Apr-2018 21:44:28	59669fcdd5eb: Waiting
build	18-Apr-2018 21:44:28	f96e6b25195f: Preparing
build	18-Apr-2018 21:44:28	c56153825175: Preparing
build	18-Apr-2018 21:44:28	7f7a065d245a: Waiting
build	18-Apr-2018 21:44:28	f96e6b25195f: Waiting
build	18-Apr-2018 21:44:28	ae620432889d: Preparing
build	18-Apr-2018 21:44:28	a2022691bf95: Preparing
build	18-Apr-2018 21:44:28	c56153825175: Waiting
build	18-Apr-2018 21:44:28	ae620432889d: Waiting
build	18-Apr-2018 21:44:28	a2022691bf95: Waiting
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build	18-Apr-2018 21:44:33	a2022691bf95: Layer already exists
build	18-Apr-2018 21:44:34	browndog_v0.2.0: digest: sha256:6b03848eec43baa01d47e32c994b064d9ea0cc3b081dfce35dc2cd1053da45e2 size: 2826
build	18-Apr-2018 21:44:35	The push refers to repository [docker.io/clowder/extractors-msc-kidney]
build	18-Apr-2018 21:44:40	a2ffe2e4f347: Preparing
build	18-Apr-2018 21:44:40	41c6ef0756f7: Preparing
build	18-Apr-2018 21:44:40	80d567800b34: Preparing
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build	18-Apr-2018 21:44:40	59669fcdd5eb: Preparing
build	18-Apr-2018 21:44:40	7f7a065d245a: Preparing
build	18-Apr-2018 21:44:40	f96e6b25195f: Preparing
build	18-Apr-2018 21:44:40	c56153825175: Preparing
build	18-Apr-2018 21:44:40	ae620432889d: Preparing
build	18-Apr-2018 21:44:40	a2022691bf95: Preparing
build	18-Apr-2018 21:44:40	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:44:40	f96e6b25195f: Waiting
build	18-Apr-2018 21:44:40	c56153825175: Waiting
build	18-Apr-2018 21:44:40	59669fcdd5eb: Waiting
build	18-Apr-2018 21:44:40	7f7a065d245a: Waiting
build	18-Apr-2018 21:44:40	ae620432889d: Waiting
build	18-Apr-2018 21:44:40	a2022691bf95: Waiting
build	18-Apr-2018 21:44:40	0cdb02ac1d86: Layer already exists
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build	18-Apr-2018 21:44:40	80d567800b34: Layer already exists
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build	18-Apr-2018 21:44:45	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:44:45	ae620432889d: Layer already exists
build	18-Apr-2018 21:44:45	a2022691bf95: Layer already exists
build	18-Apr-2018 21:44:46	browndog_v0.3.0: digest: sha256:6b03848eec43baa01d47e32c994b064d9ea0cc3b081dfce35dc2cd1053da45e2 size: 2826
build	18-Apr-2018 21:44:46	The push refers to repository [docker.io/clowder/extractors-msc-kidney]
build	18-Apr-2018 21:44:46	a2ffe2e4f347: Preparing
build	18-Apr-2018 21:44:46	41c6ef0756f7: Preparing
build	18-Apr-2018 21:44:46	80d567800b34: Preparing
build	18-Apr-2018 21:44:46	0cdb02ac1d86: Preparing
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build	18-Apr-2018 21:44:46	7f7a065d245a: Preparing
build	18-Apr-2018 21:44:46	f96e6b25195f: Preparing
build	18-Apr-2018 21:44:46	c56153825175: Preparing
build	18-Apr-2018 21:44:46	ae620432889d: Preparing
build	18-Apr-2018 21:44:46	a2022691bf95: Preparing
build	18-Apr-2018 21:44:46	7f7a065d245a: Waiting
build	18-Apr-2018 21:44:46	f96e6b25195f: Waiting
build	18-Apr-2018 21:44:46	c56153825175: Waiting
build	18-Apr-2018 21:44:46	ae620432889d: Waiting
build	18-Apr-2018 21:44:46	a2022691bf95: Waiting
build	18-Apr-2018 21:44:46	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:44:46	59669fcdd5eb: Waiting
build	18-Apr-2018 21:44:46	41c6ef0756f7: Layer already exists
build	18-Apr-2018 21:44:46	0cdb02ac1d86: Layer already exists
build	18-Apr-2018 21:44:46	a2ffe2e4f347: Layer already exists
build	18-Apr-2018 21:44:46	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:44:47	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:44:47	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:44:47	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:44:47	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:44:47	80d567800b34: Layer already exists
build	18-Apr-2018 21:44:47	ae620432889d: Layer already exists
build	18-Apr-2018 21:44:47	c56153825175: Layer already exists
build	18-Apr-2018 21:44:47	a2022691bf95: Layer already exists
build	18-Apr-2018 21:44:47	latest: digest: sha256:6b03848eec43baa01d47e32c994b064d9ea0cc3b081dfce35dc2cd1053da45e2 size: 2826
build	18-Apr-2018 21:44:47	Untagged: 22210:latest
build	18-Apr-2018 21:44:47	Sending build context to Docker daemon  67.07kB
build	18-Apr-2018 21:44:47	
build	18-Apr-2018 21:44:47	Step 1/11 : FROM clowder/pyclowder:1
build	18-Apr-2018 21:44:47	 ---> d1a9e970ed30
build	18-Apr-2018 21:44:47	Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu>
build	18-Apr-2018 21:44:47	 ---> Using cache
build	18-Apr-2018 21:44:47	 ---> 46bf81116550
build	18-Apr-2018 21:44:47	Step 3/11 : ENV RABBITMQ_URI=""     RABBITMQ_EXCHANGE="clowder"     RABBITMQ_VHOST="%2F"     RABBITMQ_QUEUE="ncsa.msc.IsletExtractor"     MONGO_URI=""    DB_USERNAME=""    DB_PASSWORD=""    MAIN_SCRIPT="extractor-Islet.py"
build	18-Apr-2018 21:44:47	 ---> Using cache
build	18-Apr-2018 21:44:47	 ---> dd2ad7a1b589
build	18-Apr-2018 21:44:47	Step 4/11 : USER root
build	18-Apr-2018 21:44:47	 ---> Using cache
build	18-Apr-2018 21:44:47	 ---> 91c3848d3f31
build	18-Apr-2018 21:44:47	Step 5/11 : COPY requirements.txt /home/clowder/
build	18-Apr-2018 21:44:47	 ---> Using cache
build	18-Apr-2018 21:44:47	 ---> c75c51142d7c
build	18-Apr-2018 21:44:47	Step 6/11 : RUN pip install --upgrade pip
build	18-Apr-2018 21:44:47	 ---> Using cache
build	18-Apr-2018 21:44:47	 ---> 1c0d3f87f103
build	18-Apr-2018 21:44:47	Step 7/11 : RUN pip install -r /home/clowder/requirements.txt
build	18-Apr-2018 21:44:47	 ---> Using cache
build	18-Apr-2018 21:44:47	 ---> cf2cf73f0483
build	18-Apr-2018 21:44:47	Step 8/11 : USER clowder
build	18-Apr-2018 21:44:47	 ---> Using cache
build	18-Apr-2018 21:44:47	 ---> f3a8548c2226
build	18-Apr-2018 21:44:47	Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/
build	18-Apr-2018 21:44:47	 ---> Using cache
build	18-Apr-2018 21:44:47	 ---> bf7cda114213
build	18-Apr-2018 21:44:47	Step 10/11 : ENTRYPOINT ["/home/clowder/entrypoint.sh"]
build	18-Apr-2018 21:44:47	 ---> Using cache
build	18-Apr-2018 21:44:47	 ---> 11ec3b401994
build	18-Apr-2018 21:44:47	Step 11/11 : CMD ["extractor"]
build	18-Apr-2018 21:44:47	 ---> Using cache
build	18-Apr-2018 21:44:47	 ---> e6e961517398
build	18-Apr-2018 21:44:47	Successfully built e6e961517398
build	18-Apr-2018 21:44:48	Successfully tagged 22210:latest
build	18-Apr-2018 21:44:48	The push refers to repository [docker.io/clowder/extractors-msc-islet]
build	18-Apr-2018 21:44:48	82cd06ddb546: Preparing
build	18-Apr-2018 21:44:48	72da6a0b7931: Preparing
build	18-Apr-2018 21:44:48	cd077f8b5a6d: Preparing
build	18-Apr-2018 21:44:48	273abc9933de: Preparing
build	18-Apr-2018 21:44:48	0cdb02ac1d86: Preparing
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build	18-Apr-2018 21:44:48	0fbe2bcb1bf9: Preparing
build	18-Apr-2018 21:44:48	59669fcdd5eb: Preparing
build	18-Apr-2018 21:44:48	7f7a065d245a: Preparing
build	18-Apr-2018 21:44:48	f96e6b25195f: Preparing
build	18-Apr-2018 21:44:48	c56153825175: Preparing
build	18-Apr-2018 21:44:48	ae620432889d: Preparing
build	18-Apr-2018 21:44:48	a2022691bf95: Preparing
build	18-Apr-2018 21:44:48	f2297bdfc824: Waiting
build	18-Apr-2018 21:44:48	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:44:48	59669fcdd5eb: Waiting
build	18-Apr-2018 21:44:48	7f7a065d245a: Waiting
build	18-Apr-2018 21:44:48	f96e6b25195f: Waiting
build	18-Apr-2018 21:44:48	c56153825175: Waiting
build	18-Apr-2018 21:44:48	ae620432889d: Waiting
build	18-Apr-2018 21:44:48	a2022691bf95: Waiting
build	18-Apr-2018 21:44:48	0cdb02ac1d86: Layer already exists
build	18-Apr-2018 21:44:48	273abc9933de: Layer already exists
build	18-Apr-2018 21:44:48	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:44:48	72da6a0b7931: Layer already exists
build	18-Apr-2018 21:44:48	82cd06ddb546: Layer already exists
build	18-Apr-2018 21:44:48	cd077f8b5a6d: Layer already exists
build	18-Apr-2018 21:44:48	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:44:48	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:44:49	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:44:54	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:44:54	c56153825175: Layer already exists
build	18-Apr-2018 21:44:54	ae620432889d: Layer already exists
build	18-Apr-2018 21:44:54	a2022691bf95: Layer already exists
build	18-Apr-2018 21:44:54	browndog_v0.2.0: digest: sha256:5da9646126fd0ebca15b3a4131f98734229fb7e1a42207650f836ae2dd43ca38 size: 3031
build	18-Apr-2018 21:44:56	The push refers to repository [docker.io/clowder/extractors-msc-islet]
build	18-Apr-2018 21:44:56	82cd06ddb546: Preparing
build	18-Apr-2018 21:44:56	72da6a0b7931: Preparing
build	18-Apr-2018 21:44:56	cd077f8b5a6d: Preparing
build	18-Apr-2018 21:44:56	273abc9933de: Preparing
build	18-Apr-2018 21:44:56	0cdb02ac1d86: Preparing
build	18-Apr-2018 21:44:56	f2297bdfc824: Preparing
build	18-Apr-2018 21:44:56	0fbe2bcb1bf9: Preparing
build	18-Apr-2018 21:44:56	59669fcdd5eb: Preparing
build	18-Apr-2018 21:44:56	7f7a065d245a: Preparing
build	18-Apr-2018 21:44:56	f96e6b25195f: Preparing
build	18-Apr-2018 21:44:56	c56153825175: Preparing
build	18-Apr-2018 21:44:56	ae620432889d: Preparing
build	18-Apr-2018 21:44:56	a2022691bf95: Preparing
build	18-Apr-2018 21:44:56	f2297bdfc824: Waiting
build	18-Apr-2018 21:44:56	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:44:56	59669fcdd5eb: Waiting
build	18-Apr-2018 21:44:56	7f7a065d245a: Waiting
build	18-Apr-2018 21:44:56	f96e6b25195f: Waiting
build	18-Apr-2018 21:44:56	c56153825175: Waiting
build	18-Apr-2018 21:44:56	ae620432889d: Waiting
build	18-Apr-2018 21:44:56	a2022691bf95: Waiting
build	18-Apr-2018 21:44:56	82cd06ddb546: Layer already exists
build	18-Apr-2018 21:44:56	0cdb02ac1d86: Layer already exists
build	18-Apr-2018 21:44:56	72da6a0b7931: Layer already exists
build	18-Apr-2018 21:44:56	cd077f8b5a6d: Layer already exists
build	18-Apr-2018 21:44:56	273abc9933de: Layer already exists
build	18-Apr-2018 21:44:56	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:44:56	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:44:56	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:44:56	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:44:56	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:44:56	c56153825175: Layer already exists
build	18-Apr-2018 21:44:57	ae620432889d: Layer already exists
build	18-Apr-2018 21:44:57	a2022691bf95: Layer already exists
build	18-Apr-2018 21:44:57	browndog_v0.3.0: digest: sha256:5da9646126fd0ebca15b3a4131f98734229fb7e1a42207650f836ae2dd43ca38 size: 3031
build	18-Apr-2018 21:44:57	The push refers to repository [docker.io/clowder/extractors-msc-islet]
build	18-Apr-2018 21:44:57	82cd06ddb546: Preparing
build	18-Apr-2018 21:44:57	72da6a0b7931: Preparing
build	18-Apr-2018 21:44:57	cd077f8b5a6d: Preparing
build	18-Apr-2018 21:44:57	273abc9933de: Preparing
build	18-Apr-2018 21:44:57	0cdb02ac1d86: Preparing
build	18-Apr-2018 21:44:57	f2297bdfc824: Preparing
build	18-Apr-2018 21:44:57	0fbe2bcb1bf9: Preparing
build	18-Apr-2018 21:44:57	59669fcdd5eb: Preparing
build	18-Apr-2018 21:44:57	7f7a065d245a: Preparing
build	18-Apr-2018 21:44:57	f96e6b25195f: Preparing
build	18-Apr-2018 21:44:57	c56153825175: Preparing
build	18-Apr-2018 21:44:57	ae620432889d: Preparing
build	18-Apr-2018 21:44:57	a2022691bf95: Preparing
build	18-Apr-2018 21:44:57	59669fcdd5eb: Waiting
build	18-Apr-2018 21:44:57	7f7a065d245a: Waiting
build	18-Apr-2018 21:44:57	f96e6b25195f: Waiting
build	18-Apr-2018 21:44:57	c56153825175: Waiting
build	18-Apr-2018 21:44:57	ae620432889d: Waiting
build	18-Apr-2018 21:44:57	a2022691bf95: Waiting
build	18-Apr-2018 21:44:57	f2297bdfc824: Waiting
build	18-Apr-2018 21:44:57	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:44:58	0cdb02ac1d86: Layer already exists
build	18-Apr-2018 21:44:58	72da6a0b7931: Layer already exists
build	18-Apr-2018 21:44:58	82cd06ddb546: Layer already exists
build	18-Apr-2018 21:44:58	273abc9933de: Layer already exists
build	18-Apr-2018 21:44:58	cd077f8b5a6d: Layer already exists
build	18-Apr-2018 21:44:58	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:44:58	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:44:58	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:44:58	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:44:58	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:44:58	ae620432889d: Layer already exists
build	18-Apr-2018 21:45:03	c56153825175: Layer already exists
build	18-Apr-2018 21:45:03	a2022691bf95: Layer already exists
build	18-Apr-2018 21:45:03	latest: digest: sha256:5da9646126fd0ebca15b3a4131f98734229fb7e1a42207650f836ae2dd43ca38 size: 3031
build	18-Apr-2018 21:45:03	Untagged: 22210:latest
build	18-Apr-2018 21:45:04	Sending build context to Docker daemon  66.05kB
build	18-Apr-2018 21:45:04	
build	18-Apr-2018 21:45:04	Step 1/11 : FROM clowder/pyclowder:1
build	18-Apr-2018 21:45:04	 ---> d1a9e970ed30
build	18-Apr-2018 21:45:04	Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu>
build	18-Apr-2018 21:45:04	 ---> Using cache
build	18-Apr-2018 21:45:04	 ---> 46bf81116550
build	18-Apr-2018 21:45:04	Step 3/11 : ENV RABBITMQ_URI=""     RABBITMQ_EXCHANGE="clowder"     RABBITMQ_VHOST="%2F"     RABBITMQ_QUEUE="ncsa.msc.ChemCBCExtractor"     MONGO_URI=""    DB_USERNAME=""    DB_PASSWORD=""    MAIN_SCRIPT="extractor-Chem.py"
build	18-Apr-2018 21:45:04	 ---> Using cache
build	18-Apr-2018 21:45:04	 ---> d4b5f9ca7750
build	18-Apr-2018 21:45:04	Step 4/11 : USER root
build	18-Apr-2018 21:45:04	 ---> Using cache
build	18-Apr-2018 21:45:04	 ---> a99230797089
build	18-Apr-2018 21:45:04	Step 5/11 : COPY requirements.txt /home/clowder/
build	18-Apr-2018 21:45:04	 ---> Using cache
build	18-Apr-2018 21:45:04	 ---> 065a544b0599
build	18-Apr-2018 21:45:04	Step 6/11 : RUN pip install --upgrade pip
build	18-Apr-2018 21:45:04	 ---> Using cache
build	18-Apr-2018 21:45:04	 ---> df6d2e7d1130
build	18-Apr-2018 21:45:04	Step 7/11 : RUN pip install -r /home/clowder/requirements.txt
build	18-Apr-2018 21:45:04	 ---> Using cache
build	18-Apr-2018 21:45:04	 ---> 4de36593cd66
build	18-Apr-2018 21:45:04	Step 8/11 : USER clowder
build	18-Apr-2018 21:45:04	 ---> Using cache
build	18-Apr-2018 21:45:04	 ---> 74b4d587dc9f
build	18-Apr-2018 21:45:04	Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/
build	18-Apr-2018 21:45:04	 ---> Using cache
build	18-Apr-2018 21:45:04	 ---> d386756a41cd
build	18-Apr-2018 21:45:04	Step 10/11 : ENTRYPOINT ["/home/clowder/entrypoint.sh"]
build	18-Apr-2018 21:45:04	 ---> Using cache
build	18-Apr-2018 21:45:04	 ---> 452106dfbd0f
build	18-Apr-2018 21:45:04	Step 11/11 : CMD ["extractor"]
build	18-Apr-2018 21:45:04	 ---> Using cache
build	18-Apr-2018 21:45:04	 ---> 1f0d0a7da8dd
build	18-Apr-2018 21:45:04	Successfully built 1f0d0a7da8dd
build	18-Apr-2018 21:45:04	Successfully tagged 22210:latest
build	18-Apr-2018 21:45:04	The push refers to repository [docker.io/clowder/extractors-msc-chemcbc]
build	18-Apr-2018 21:45:04	9ffdd3dc6673: Preparing
build	18-Apr-2018 21:45:04	695eaee0b84c: Preparing
build	18-Apr-2018 21:45:04	4685a92e073c: Preparing
build	18-Apr-2018 21:45:04	1cd7cbd2febc: Preparing
build	18-Apr-2018 21:45:04	0cdb02ac1d86: Preparing
build	18-Apr-2018 21:45:04	f2297bdfc824: Preparing
build	18-Apr-2018 21:45:04	0fbe2bcb1bf9: Preparing
build	18-Apr-2018 21:45:04	59669fcdd5eb: Preparing
build	18-Apr-2018 21:45:04	7f7a065d245a: Preparing
build	18-Apr-2018 21:45:04	f96e6b25195f: Preparing
build	18-Apr-2018 21:45:04	c56153825175: Preparing
build	18-Apr-2018 21:45:04	ae620432889d: Preparing
build	18-Apr-2018 21:45:04	a2022691bf95: Preparing
build	18-Apr-2018 21:45:04	59669fcdd5eb: Waiting
build	18-Apr-2018 21:45:04	7f7a065d245a: Waiting
build	18-Apr-2018 21:45:04	f96e6b25195f: Waiting
build	18-Apr-2018 21:45:04	c56153825175: Waiting
build	18-Apr-2018 21:45:04	ae620432889d: Waiting
build	18-Apr-2018 21:45:04	a2022691bf95: Waiting
build	18-Apr-2018 21:45:04	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:45:04	f2297bdfc824: Waiting
build	18-Apr-2018 21:45:04	0cdb02ac1d86: Layer already exists
build	18-Apr-2018 21:45:04	4685a92e073c: Layer already exists
build	18-Apr-2018 21:45:04	1cd7cbd2febc: Layer already exists
build	18-Apr-2018 21:45:04	695eaee0b84c: Layer already exists
build	18-Apr-2018 21:45:06	9ffdd3dc6673: Layer already exists
build	18-Apr-2018 21:45:09	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:45:09	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:45:09	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:45:09	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:45:09	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:45:10	c56153825175: Layer already exists
build	18-Apr-2018 21:45:10	ae620432889d: Layer already exists
build	18-Apr-2018 21:45:10	a2022691bf95: Layer already exists
build	18-Apr-2018 21:45:10	browndog_v0.2.0: digest: sha256:e498ced47865dfbf603789504ffd4e791d2553ff6a760e3957a020c866c9b645 size: 3031
build	18-Apr-2018 21:45:11	The push refers to repository [docker.io/clowder/extractors-msc-chemcbc]
build	18-Apr-2018 21:45:11	9ffdd3dc6673: Preparing
build	18-Apr-2018 21:45:11	695eaee0b84c: Preparing
build	18-Apr-2018 21:45:11	4685a92e073c: Preparing
build	18-Apr-2018 21:45:11	1cd7cbd2febc: Preparing
build	18-Apr-2018 21:45:11	0cdb02ac1d86: Preparing
build	18-Apr-2018 21:45:11	f2297bdfc824: Preparing
build	18-Apr-2018 21:45:11	0fbe2bcb1bf9: Preparing
build	18-Apr-2018 21:45:11	59669fcdd5eb: Preparing
build	18-Apr-2018 21:45:11	7f7a065d245a: Preparing
build	18-Apr-2018 21:45:11	f96e6b25195f: Preparing
build	18-Apr-2018 21:45:11	f2297bdfc824: Waiting
build	18-Apr-2018 21:45:11	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:45:11	59669fcdd5eb: Waiting
build	18-Apr-2018 21:45:11	7f7a065d245a: Waiting
build	18-Apr-2018 21:45:11	c56153825175: Preparing
build	18-Apr-2018 21:45:11	ae620432889d: Preparing
build	18-Apr-2018 21:45:11	a2022691bf95: Preparing
build	18-Apr-2018 21:45:11	c56153825175: Waiting
build	18-Apr-2018 21:45:11	ae620432889d: Waiting
build	18-Apr-2018 21:45:11	a2022691bf95: Waiting
build	18-Apr-2018 21:45:11	f96e6b25195f: Waiting
build	18-Apr-2018 21:45:11	9ffdd3dc6673: Layer already exists
build	18-Apr-2018 21:45:11	0cdb02ac1d86: Layer already exists
build	18-Apr-2018 21:45:11	4685a92e073c: Layer already exists
build	18-Apr-2018 21:45:11	695eaee0b84c: Layer already exists
build	18-Apr-2018 21:45:11	1cd7cbd2febc: Layer already exists
build	18-Apr-2018 21:45:11	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:45:11	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:45:11	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:45:11	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:45:11	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:45:11	c56153825175: Layer already exists
build	18-Apr-2018 21:45:11	ae620432889d: Layer already exists
build	18-Apr-2018 21:45:11	a2022691bf95: Layer already exists
build	18-Apr-2018 21:45:12	browndog_v0.3.0: digest: sha256:e498ced47865dfbf603789504ffd4e791d2553ff6a760e3957a020c866c9b645 size: 3031
build	18-Apr-2018 21:45:12	The push refers to repository [docker.io/clowder/extractors-msc-chemcbc]
build	18-Apr-2018 21:45:12	9ffdd3dc6673: Preparing
build	18-Apr-2018 21:45:12	695eaee0b84c: Preparing
build	18-Apr-2018 21:45:12	4685a92e073c: Preparing
build	18-Apr-2018 21:45:12	1cd7cbd2febc: Preparing
build	18-Apr-2018 21:45:12	0cdb02ac1d86: Preparing
build	18-Apr-2018 21:45:12	f2297bdfc824: Preparing
build	18-Apr-2018 21:45:12	0fbe2bcb1bf9: Preparing
build	18-Apr-2018 21:45:12	59669fcdd5eb: Preparing
build	18-Apr-2018 21:45:12	7f7a065d245a: Preparing
build	18-Apr-2018 21:45:12	f96e6b25195f: Preparing
build	18-Apr-2018 21:45:12	c56153825175: Preparing
build	18-Apr-2018 21:45:12	ae620432889d: Preparing
build	18-Apr-2018 21:45:12	a2022691bf95: Preparing
build	18-Apr-2018 21:45:12	59669fcdd5eb: Waiting
build	18-Apr-2018 21:45:12	7f7a065d245a: Waiting
build	18-Apr-2018 21:45:12	f96e6b25195f: Waiting
build	18-Apr-2018 21:45:12	c56153825175: Waiting
build	18-Apr-2018 21:45:12	ae620432889d: Waiting
build	18-Apr-2018 21:45:12	a2022691bf95: Waiting
build	18-Apr-2018 21:45:12	f2297bdfc824: Waiting
build	18-Apr-2018 21:45:12	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:45:13	695eaee0b84c: Layer already exists
build	18-Apr-2018 21:45:13	4685a92e073c: Layer already exists
build	18-Apr-2018 21:45:13	9ffdd3dc6673: Layer already exists
build	18-Apr-2018 21:45:13	0cdb02ac1d86: Layer already exists
build	18-Apr-2018 21:45:13	1cd7cbd2febc: Layer already exists
build	18-Apr-2018 21:45:13	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:45:13	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:45:13	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:45:13	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:45:13	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:45:13	ae620432889d: Layer already exists
build	18-Apr-2018 21:45:13	c56153825175: Layer already exists
build	18-Apr-2018 21:45:13	a2022691bf95: Layer already exists
build	18-Apr-2018 21:45:13	latest: digest: sha256:e498ced47865dfbf603789504ffd4e791d2553ff6a760e3957a020c866c9b645 size: 3031
build	18-Apr-2018 21:45:14	Untagged: 22210:latest
build	18-Apr-2018 21:45:14	Sending build context to Docker daemon  198.1kB
build	18-Apr-2018 21:45:14	
build	18-Apr-2018 21:45:14	Step 1/11 : FROM clowder/pyclowder:1
build	18-Apr-2018 21:45:14	 ---> d1a9e970ed30
build	18-Apr-2018 21:45:14	Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu>
build	18-Apr-2018 21:45:14	 ---> Using cache
build	18-Apr-2018 21:45:14	 ---> 46bf81116550
build	18-Apr-2018 21:45:14	Step 3/11 : ENV RABBITMQ_URI=""     RABBITMQ_EXCHANGE="clowder"     RABBITMQ_VHOST="%2F"     RABBITMQ_QUEUE="ncsa.msc.MonitorExtractor"     MONGO_URI=""    DB_USERNAME=""    DB_PASSWORD=""    MAIN_SCRIPT="extractor-Monitor.py"
build	18-Apr-2018 21:45:14	 ---> Using cache
build	18-Apr-2018 21:45:14	 ---> 6612cb4532ae
build	18-Apr-2018 21:45:14	Step 4/11 : USER root
build	18-Apr-2018 21:45:14	 ---> Using cache
build	18-Apr-2018 21:45:14	 ---> a939e24e5e36
build	18-Apr-2018 21:45:14	Step 5/11 : COPY requirements.txt /home/clowder/
build	18-Apr-2018 21:45:14	 ---> Using cache
build	18-Apr-2018 21:45:14	 ---> 796505cd296f
build	18-Apr-2018 21:45:14	Step 6/11 : RUN pip install --upgrade pip
build	18-Apr-2018 21:45:14	 ---> Using cache
build	18-Apr-2018 21:45:14	 ---> c39deed02ffe
build	18-Apr-2018 21:45:14	Step 7/11 : RUN pip install -r /home/clowder/requirements.txt
build	18-Apr-2018 21:45:14	 ---> Using cache
build	18-Apr-2018 21:45:14	 ---> 980c152d5e6f
build	18-Apr-2018 21:45:14	Step 8/11 : USER clowder
build	18-Apr-2018 21:45:14	 ---> Using cache
build	18-Apr-2018 21:45:14	 ---> 79d45cc94dda
build	18-Apr-2018 21:45:14	Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/
build	18-Apr-2018 21:45:14	 ---> Using cache
build	18-Apr-2018 21:45:14	 ---> 8d367fc2568b
build	18-Apr-2018 21:45:14	Step 10/11 : ENTRYPOINT ["/home/clowder/entrypoint.sh"]
build	18-Apr-2018 21:45:14	 ---> Using cache
build	18-Apr-2018 21:45:14	 ---> fd6605ff1eed
build	18-Apr-2018 21:45:14	Step 11/11 : CMD ["extractor"]
build	18-Apr-2018 21:45:14	 ---> Using cache
build	18-Apr-2018 21:45:14	 ---> 11a0c838f3da
build	18-Apr-2018 21:45:14	Successfully built 11a0c838f3da
build	18-Apr-2018 21:45:14	Successfully tagged 22210:latest
build	18-Apr-2018 21:45:14	The push refers to repository [docker.io/clowder/extractors-msc-monitor]
build	18-Apr-2018 21:45:14	630a4020e5d2: Preparing
build	18-Apr-2018 21:45:14	4d32a6daeb31: Preparing
build	18-Apr-2018 21:45:14	55f1d62ecf61: Preparing
build	18-Apr-2018 21:45:14	51db3fc7aab4: Preparing
build	18-Apr-2018 21:45:14	0cdb02ac1d86: Preparing
build	18-Apr-2018 21:45:14	f2297bdfc824: Preparing
build	18-Apr-2018 21:45:14	0fbe2bcb1bf9: Preparing
build	18-Apr-2018 21:45:14	59669fcdd5eb: Preparing
build	18-Apr-2018 21:45:14	7f7a065d245a: Preparing
build	18-Apr-2018 21:45:14	f96e6b25195f: Preparing
build	18-Apr-2018 21:45:14	c56153825175: Preparing
build	18-Apr-2018 21:45:14	ae620432889d: Preparing
build	18-Apr-2018 21:45:14	a2022691bf95: Preparing
build	18-Apr-2018 21:45:14	f2297bdfc824: Waiting
build	18-Apr-2018 21:45:14	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:45:14	59669fcdd5eb: Waiting
build	18-Apr-2018 21:45:14	7f7a065d245a: Waiting
build	18-Apr-2018 21:45:14	f96e6b25195f: Waiting
build	18-Apr-2018 21:45:14	c56153825175: Waiting
build	18-Apr-2018 21:45:14	ae620432889d: Waiting
build	18-Apr-2018 21:45:14	a2022691bf95: Waiting
build	18-Apr-2018 21:45:14	0cdb02ac1d86: Layer already exists
build	18-Apr-2018 21:45:14	4d32a6daeb31: Layer already exists
build	18-Apr-2018 21:45:15	55f1d62ecf61: Layer already exists
build	18-Apr-2018 21:45:15	51db3fc7aab4: Layer already exists
build	18-Apr-2018 21:45:15	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:45:15	630a4020e5d2: Layer already exists
build	18-Apr-2018 21:45:15	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:45:15	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:45:15	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:45:15	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:45:15	c56153825175: Layer already exists
build	18-Apr-2018 21:45:15	ae620432889d: Layer already exists
build	18-Apr-2018 21:45:15	a2022691bf95: Layer already exists
build	18-Apr-2018 21:45:16	browndog_v0.2.0: digest: sha256:d02b674f2f2d6c69e89b390850093db1ae887220a1daf89ba6881ed7d378b78d size: 3031
build	18-Apr-2018 21:45:16	The push refers to repository [docker.io/clowder/extractors-msc-monitor]
build	18-Apr-2018 21:45:16	630a4020e5d2: Preparing
build	18-Apr-2018 21:45:16	4d32a6daeb31: Preparing
build	18-Apr-2018 21:45:16	55f1d62ecf61: Preparing
build	18-Apr-2018 21:45:16	51db3fc7aab4: Preparing
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build	18-Apr-2018 21:45:16	ae620432889d: Preparing
build	18-Apr-2018 21:45:16	a2022691bf95: Preparing
build	18-Apr-2018 21:45:16	59669fcdd5eb: Waiting
build	18-Apr-2018 21:45:16	7f7a065d245a: Waiting
build	18-Apr-2018 21:45:16	f96e6b25195f: Waiting
build	18-Apr-2018 21:45:16	c56153825175: Waiting
build	18-Apr-2018 21:45:16	f2297bdfc824: Waiting
build	18-Apr-2018 21:45:16	ae620432889d: Waiting
build	18-Apr-2018 21:45:16	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:45:16	a2022691bf95: Waiting
build	18-Apr-2018 21:45:16	4d32a6daeb31: Layer already exists
build	18-Apr-2018 21:45:16	51db3fc7aab4: Layer already exists
build	18-Apr-2018 21:45:16	0cdb02ac1d86: Layer already exists
build	18-Apr-2018 21:45:16	55f1d62ecf61: Layer already exists
build	18-Apr-2018 21:45:16	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:45:16	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:45:16	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:45:16	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:45:16	630a4020e5d2: Layer already exists
build	18-Apr-2018 21:45:17	ae620432889d: Layer already exists
build	18-Apr-2018 21:45:17	c56153825175: Layer already exists
build	18-Apr-2018 21:45:17	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:45:17	a2022691bf95: Layer already exists
build	18-Apr-2018 21:45:17	browndog_v0.3.0: digest: sha256:d02b674f2f2d6c69e89b390850093db1ae887220a1daf89ba6881ed7d378b78d size: 3031
build	18-Apr-2018 21:45:17	The push refers to repository [docker.io/clowder/extractors-msc-monitor]
build	18-Apr-2018 21:45:17	630a4020e5d2: Preparing
build	18-Apr-2018 21:45:17	4d32a6daeb31: Preparing
build	18-Apr-2018 21:45:17	55f1d62ecf61: Preparing
build	18-Apr-2018 21:45:17	51db3fc7aab4: Preparing
build	18-Apr-2018 21:45:17	0cdb02ac1d86: Preparing
build	18-Apr-2018 21:45:17	f2297bdfc824: Preparing
build	18-Apr-2018 21:45:17	0fbe2bcb1bf9: Preparing
build	18-Apr-2018 21:45:17	59669fcdd5eb: Preparing
build	18-Apr-2018 21:45:17	7f7a065d245a: Preparing
build	18-Apr-2018 21:45:17	f96e6b25195f: Preparing
build	18-Apr-2018 21:45:17	c56153825175: Preparing
build	18-Apr-2018 21:45:17	ae620432889d: Preparing
build	18-Apr-2018 21:45:17	a2022691bf95: Preparing
build	18-Apr-2018 21:45:17	7f7a065d245a: Waiting
build	18-Apr-2018 21:45:17	a2022691bf95: Waiting
build	18-Apr-2018 21:45:17	f96e6b25195f: Waiting
build	18-Apr-2018 21:45:17	c56153825175: Waiting
build	18-Apr-2018 21:45:17	ae620432889d: Waiting
build	18-Apr-2018 21:45:17	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:45:17	f2297bdfc824: Waiting
build	18-Apr-2018 21:45:17	59669fcdd5eb: Waiting
build	18-Apr-2018 21:45:18	0cdb02ac1d86: Layer already exists
build	18-Apr-2018 21:45:18	630a4020e5d2: Layer already exists
build	18-Apr-2018 21:45:23	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:45:23	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:45:23	51db3fc7aab4: Layer already exists
build	18-Apr-2018 21:45:23	55f1d62ecf61: Layer already exists
build	18-Apr-2018 21:45:23	4d32a6daeb31: Layer already exists
build	18-Apr-2018 21:45:23	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:45:23	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:45:23	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:45:23	c56153825175: Layer already exists
build	18-Apr-2018 21:45:23	ae620432889d: Layer already exists
build	18-Apr-2018 21:45:23	a2022691bf95: Layer already exists
build	18-Apr-2018 21:45:23	latest: digest: sha256:d02b674f2f2d6c69e89b390850093db1ae887220a1daf89ba6881ed7d378b78d size: 3031
build	18-Apr-2018 21:45:24	Untagged: 22210:latest
build	18-Apr-2018 21:45:24	Sending build context to Docker daemon   12.1MB
build	18-Apr-2018 21:45:24	
build	18-Apr-2018 21:45:24	Step 1/11 : FROM clowder/pyclowder:1
build	18-Apr-2018 21:45:24	 ---> d1a9e970ed30
build	18-Apr-2018 21:45:24	Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu>
build	18-Apr-2018 21:45:24	 ---> Using cache
build	18-Apr-2018 21:45:24	 ---> 46bf81116550
build	18-Apr-2018 21:45:24	Step 3/11 : ENV RABBITMQ_URI=""     RABBITMQ_EXCHANGE="clowder"     RABBITMQ_VHOST="%2F"     RABBITMQ_QUEUE="ncsa.msc.PhenotypeExtractor"     MONGO_URI=""    DB_USERNAME=""    DB_PASSWORD=""    MAIN_SCRIPT="extractor-Phenotype.py"
build	18-Apr-2018 21:45:24	 ---> Using cache
build	18-Apr-2018 21:45:24	 ---> 1604a36dc849
build	18-Apr-2018 21:45:24	Step 4/11 : USER root
build	18-Apr-2018 21:45:24	 ---> Using cache
build	18-Apr-2018 21:45:24	 ---> c40e6365dcbe
build	18-Apr-2018 21:45:24	Step 5/11 : COPY requirements.txt /home/clowder/
build	18-Apr-2018 21:45:24	 ---> Using cache
build	18-Apr-2018 21:45:24	 ---> 7fc75f453906
build	18-Apr-2018 21:45:24	Step 6/11 : RUN pip install --upgrade pip
build	18-Apr-2018 21:45:24	 ---> Using cache
build	18-Apr-2018 21:45:24	 ---> 8df4a7ffb6fb
build	18-Apr-2018 21:45:24	Step 7/11 : RUN pip install -r /home/clowder/requirements.txt
build	18-Apr-2018 21:45:24	 ---> Using cache
build	18-Apr-2018 21:45:24	 ---> fd74ef1aceda
build	18-Apr-2018 21:45:24	Step 8/11 : USER clowder
build	18-Apr-2018 21:45:24	 ---> Using cache
build	18-Apr-2018 21:45:24	 ---> 630208e60695
build	18-Apr-2018 21:45:24	Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/
build	18-Apr-2018 21:45:24	 ---> Using cache
build	18-Apr-2018 21:45:24	 ---> 8c7d7ad853eb
build	18-Apr-2018 21:45:24	Step 10/11 : ENTRYPOINT ["/home/clowder/entrypoint.sh"]
build	18-Apr-2018 21:45:24	 ---> Using cache
build	18-Apr-2018 21:45:24	 ---> e585421734f6
build	18-Apr-2018 21:45:24	Step 11/11 : CMD ["extractor"]
build	18-Apr-2018 21:45:24	 ---> Using cache
build	18-Apr-2018 21:45:24	 ---> 225624e9556a
build	18-Apr-2018 21:45:24	Successfully built 225624e9556a
build	18-Apr-2018 21:45:24	Successfully tagged 22210:latest
build	18-Apr-2018 21:45:24	The push refers to repository [docker.io/clowder/extractors-msc-phenotype]
build	18-Apr-2018 21:45:24	20baf33cf4e5: Preparing
build	18-Apr-2018 21:45:24	67d3d610e020: Preparing
build	18-Apr-2018 21:45:24	b4d78dfb2d96: Preparing
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build	18-Apr-2018 21:45:24	a2022691bf95: Preparing
build	18-Apr-2018 21:45:24	f2297bdfc824: Waiting
build	18-Apr-2018 21:45:24	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:45:24	59669fcdd5eb: Waiting
build	18-Apr-2018 21:45:24	7f7a065d245a: Waiting
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build	18-Apr-2018 21:45:24	ae620432889d: Waiting
build	18-Apr-2018 21:45:24	a2022691bf95: Waiting
build	18-Apr-2018 21:45:25	0cdb02ac1d86: Layer already exists
build	18-Apr-2018 21:45:25	20baf33cf4e5: Layer already exists
build	18-Apr-2018 21:45:25	b4d78dfb2d96: Layer already exists
build	18-Apr-2018 21:45:25	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:45:25	764b1463235e: Layer already exists
build	18-Apr-2018 21:45:25	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:45:25	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:45:25	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:45:25	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:45:25	c56153825175: Layer already exists
build	18-Apr-2018 21:45:25	ae620432889d: Layer already exists
build	18-Apr-2018 21:45:25	a2022691bf95: Layer already exists
build	18-Apr-2018 21:45:25	67d3d610e020: Layer already exists
build	18-Apr-2018 21:45:26	browndog_v0.2.0: digest: sha256:35428eac474992acdc01a32f6a860e0d5aa4cd9499174b5c6e3c9797a19a19cc size: 3031
build	18-Apr-2018 21:45:26	The push refers to repository [docker.io/clowder/extractors-msc-phenotype]
build	18-Apr-2018 21:45:31	20baf33cf4e5: Preparing
build	18-Apr-2018 21:45:31	67d3d610e020: Preparing
build	18-Apr-2018 21:45:31	b4d78dfb2d96: Preparing
build	18-Apr-2018 21:45:31	764b1463235e: Preparing
build	18-Apr-2018 21:45:31	0cdb02ac1d86: Preparing
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build	18-Apr-2018 21:45:31	59669fcdd5eb: Preparing
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build	18-Apr-2018 21:45:31	ae620432889d: Preparing
build	18-Apr-2018 21:45:31	a2022691bf95: Preparing
build	18-Apr-2018 21:45:31	f2297bdfc824: Waiting
build	18-Apr-2018 21:45:31	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:45:31	59669fcdd5eb: Waiting
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build	18-Apr-2018 21:45:31	c56153825175: Waiting
build	18-Apr-2018 21:45:31	ae620432889d: Waiting
build	18-Apr-2018 21:45:31	a2022691bf95: Waiting
build	18-Apr-2018 21:45:32	67d3d610e020: Layer already exists
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build	18-Apr-2018 21:45:32	f2297bdfc824: Layer already exists
build	18-Apr-2018 21:45:32	59669fcdd5eb: Layer already exists
build	18-Apr-2018 21:45:32	0fbe2bcb1bf9: Layer already exists
build	18-Apr-2018 21:45:32	7f7a065d245a: Layer already exists
build	18-Apr-2018 21:45:32	c56153825175: Layer already exists
build	18-Apr-2018 21:45:32	ae620432889d: Layer already exists
build	18-Apr-2018 21:45:32	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:45:32	a2022691bf95: Layer already exists
build	18-Apr-2018 21:45:37	20baf33cf4e5: Layer already exists
build	18-Apr-2018 21:45:37	browndog_v0.3.0: digest: sha256:35428eac474992acdc01a32f6a860e0d5aa4cd9499174b5c6e3c9797a19a19cc size: 3031
build	18-Apr-2018 21:45:37	The push refers to repository [docker.io/clowder/extractors-msc-phenotype]
build	18-Apr-2018 21:45:37	20baf33cf4e5: Preparing
build	18-Apr-2018 21:45:37	67d3d610e020: Preparing
build	18-Apr-2018 21:45:37	b4d78dfb2d96: Preparing
build	18-Apr-2018 21:45:37	764b1463235e: Preparing
build	18-Apr-2018 21:45:37	0cdb02ac1d86: Preparing
build	18-Apr-2018 21:45:37	f2297bdfc824: Preparing
build	18-Apr-2018 21:45:37	0fbe2bcb1bf9: Preparing
build	18-Apr-2018 21:45:37	59669fcdd5eb: Preparing
build	18-Apr-2018 21:45:37	7f7a065d245a: Preparing
build	18-Apr-2018 21:45:37	f96e6b25195f: Preparing
build	18-Apr-2018 21:45:37	c56153825175: Preparing
build	18-Apr-2018 21:45:37	ae620432889d: Preparing
build	18-Apr-2018 21:45:37	a2022691bf95: Preparing
build	18-Apr-2018 21:45:37	f2297bdfc824: Waiting
build	18-Apr-2018 21:45:37	0fbe2bcb1bf9: Waiting
build	18-Apr-2018 21:45:37	59669fcdd5eb: Waiting
build	18-Apr-2018 21:45:37	7f7a065d245a: Waiting
build	18-Apr-2018 21:45:37	f96e6b25195f: Waiting
build	18-Apr-2018 21:45:37	c56153825175: Waiting
build	18-Apr-2018 21:45:37	ae620432889d: Waiting
build	18-Apr-2018 21:45:37	a2022691bf95: Waiting
build	18-Apr-2018 21:45:38	b4d78dfb2d96: Layer already exists
build	18-Apr-2018 21:45:38	20baf33cf4e5: Layer already exists
build	18-Apr-2018 21:45:38	67d3d610e020: Layer already exists
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build	18-Apr-2018 21:45:38	59669fcdd5eb: Layer already exists
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build	18-Apr-2018 21:45:38	764b1463235e: Layer already exists
build	18-Apr-2018 21:45:38	c56153825175: Layer already exists
build	18-Apr-2018 21:45:38	ae620432889d: Layer already exists
build	18-Apr-2018 21:45:38	f96e6b25195f: Layer already exists
build	18-Apr-2018 21:45:38	a2022691bf95: Layer already exists
build	18-Apr-2018 21:45:38	latest: digest: sha256:35428eac474992acdc01a32f6a860e0d5aa4cd9499174b5c6e3c9797a19a19cc size: 3031
build	18-Apr-2018 21:45:39	Untagged: 22210:latest
simple	18-Apr-2018 21:45:39	Finished task 'docker build' with result: Success
simple	18-Apr-2018 21:45:39	Running post build plugin 'Docker Container Cleanup'
simple	18-Apr-2018 21:45:39	Running post build plugin 'NCover Results Collector'
simple	18-Apr-2018 21:45:39	Running post build plugin 'Clover Results Collector'
simple	18-Apr-2018 21:45:39	Running post build plugin 'npm Cache Cleanup'
simple	18-Apr-2018 21:45:39	Running post build plugin 'Artifact Copier'
simple	18-Apr-2018 21:45:39	Finalising the build...
simple	18-Apr-2018 21:45:39	Stopping timer.
simple	18-Apr-2018 21:45:39	Build CATS-MSC-JOB1-36 completed.
simple	18-Apr-2018 21:45:39	Running on server: post build plugin 'NCover Results Collector'
simple	18-Apr-2018 21:45:39	Running on server: post build plugin 'Build Hanging Detection Configuration'
simple	18-Apr-2018 21:45:39	Running on server: post build plugin 'Clover Delta Calculator'
simple	18-Apr-2018 21:45:39	Running on server: post build plugin 'Maven Dependencies Postprocessor'
simple	18-Apr-2018 21:45:39	All post build plugins have finished
simple	18-Apr-2018 21:45:39	Generating build results summary...
simple	18-Apr-2018 21:45:39	Saving build results to disk...
simple	18-Apr-2018 21:45:39	Logging substituted variables...
simple	18-Apr-2018 21:45:39	Indexing build results...
simple	18-Apr-2018 21:45:39	Finished building CATS-MSC-JOB1-36.