simple 14-Oct-2019 14:25:40 Build Clowder - extractors-msc - Default Job #42 (CATS-MSC-JOB1-42) started building on agent buildserver-3.os.ncsa.edu simple 14-Oct-2019 14:25:40 Remote agent on host buildserver-3.os.ncsa.edu simple 14-Oct-2019 14:25:40 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1 simple 14-Oct-2019 14:25:40 Executing build Clowder - extractors-msc - Default Job #42 (CATS-MSC-JOB1-42) simple 14-Oct-2019 14:25:40 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 14-Oct-2019 14:25:40 Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1 simple 14-Oct-2019 14:25:40 Updating source code to revision: 6aaab3692bc88bb1c0016521723c45399615c5f2 simple 14-Oct-2019 14:25:40 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1/.git'. simple 14-Oct-2019 14:25:40 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1/.git/ simple 14-Oct-2019 14:25:40 Fetching 'refs/heads/master' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git'. Will try to do a shallow fetch. simple 14-Oct-2019 14:25:40 Warning: Permanently added '[127.0.0.1]:33195' (RSA) to the list of known hosts. simple 14-Oct-2019 14:25:42 From ssh://127.0.0.1:33195/cats/extractors-msc simple 14-Oct-2019 14:25:42 * [new branch] master -> master simple 14-Oct-2019 14:25:42 * [new tag] browndog_v0.2.0 -> browndog_v0.2.0 simple 14-Oct-2019 14:25:42 * [new tag] browndog_v0.3.0 -> browndog_v0.3.0 simple 14-Oct-2019 14:25:42 Checking out revision 6aaab3692bc88bb1c0016521723c45399615c5f2. simple 14-Oct-2019 14:25:43 Already on 'master' simple 14-Oct-2019 14:25:43 Updated source code to revision: 6aaab3692bc88bb1c0016521723c45399615c5f2 simple 14-Oct-2019 14:25:43 Finished task 'Checkout Default Repository' with result: Success simple 14-Oct-2019 14:25:43 Running pre-build action: VCS Version Collector simple 14-Oct-2019 14:25:43 Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 14-Oct-2019 14:25:43 Beginning to execute external process for build 'Clowder - extractors-msc - Default Job #42 (CATS-MSC-JOB1-42)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC-JOB1\n ... using extra environment variables: 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build 14-Oct-2019 14:25:43 Sending build context to Docker daemon 2.284MB build 14-Oct-2019 14:25:43 build 14-Oct-2019 14:25:43 Step 1/11 : FROM clowder/pyclowder:1 build 14-Oct-2019 14:25:43 1: Pulling from clowder/pyclowder build 14-Oct-2019 14:25:43 9fb6c798fa41: Pulling fs layer build 14-Oct-2019 14:25:43 3b61febd4aef: Pulling fs layer build 14-Oct-2019 14:25:43 9d99b9777eb0: Pulling fs layer build 14-Oct-2019 14:25:43 d010c8cf75d7: Pulling fs layer build 14-Oct-2019 14:25:43 7fac07fb303e: Pulling fs layer build 14-Oct-2019 14:25:43 7ed77dc4484e: Pulling fs layer build 14-Oct-2019 14:25:43 8703bf9e3153: Pulling fs layer build 14-Oct-2019 14:25:43 1797373d3c97: Pulling fs layer build 14-Oct-2019 14:25:43 bc81e92cfe84: Pulling fs layer build 14-Oct-2019 14:25:43 7fac07fb303e: Waiting build 14-Oct-2019 14:25:43 7ed77dc4484e: Waiting build 14-Oct-2019 14:25:43 1797373d3c97: Waiting build 14-Oct-2019 14:25:43 bc81e92cfe84: Waiting build 14-Oct-2019 14:25:43 8703bf9e3153: Waiting build 14-Oct-2019 14:25:44 3b61febd4aef: Verifying Checksum build 14-Oct-2019 14:25:44 3b61febd4aef: Download complete build 14-Oct-2019 14:25:44 9d99b9777eb0: Verifying Checksum build 14-Oct-2019 14:25:44 9d99b9777eb0: Download complete build 14-Oct-2019 14:25:44 d010c8cf75d7: Verifying Checksum build 14-Oct-2019 14:25:44 d010c8cf75d7: Download complete build 14-Oct-2019 14:25:44 7fac07fb303e: Verifying Checksum build 14-Oct-2019 14:25:44 7fac07fb303e: Download complete build 14-Oct-2019 14:25:44 8703bf9e3153: Verifying Checksum build 14-Oct-2019 14:25:44 8703bf9e3153: Download complete build 14-Oct-2019 14:25:44 1797373d3c97: Verifying Checksum build 14-Oct-2019 14:25:44 1797373d3c97: Download complete build 14-Oct-2019 14:25:44 7ed77dc4484e: Verifying Checksum build 14-Oct-2019 14:25:44 7ed77dc4484e: Download complete build 14-Oct-2019 14:25:45 bc81e92cfe84: Verifying Checksum build 14-Oct-2019 14:25:45 bc81e92cfe84: Download complete build 14-Oct-2019 14:25:45 9fb6c798fa41: Verifying Checksum build 14-Oct-2019 14:25:45 9fb6c798fa41: Download complete build 14-Oct-2019 14:25:47 9fb6c798fa41: Pull complete build 14-Oct-2019 14:25:48 3b61febd4aef: Pull complete build 14-Oct-2019 14:25:49 9d99b9777eb0: Pull complete build 14-Oct-2019 14:25:49 d010c8cf75d7: Pull complete build 14-Oct-2019 14:25:50 7fac07fb303e: Pull complete build 14-Oct-2019 14:25:51 7ed77dc4484e: Pull complete build 14-Oct-2019 14:25:52 8703bf9e3153: Pull complete build 14-Oct-2019 14:25:52 1797373d3c97: Pull complete build 14-Oct-2019 14:25:53 bc81e92cfe84: Pull complete build 14-Oct-2019 14:25:53 Digest: sha256:c54f3dbe5c8afe1aaadf070212c982dc7b46a6c070aaed30edf17e59e5698316 build 14-Oct-2019 14:25:53 Status: Downloaded newer image for clowder/pyclowder:1 build 14-Oct-2019 14:25:53 ---> d1a9e970ed30 build 14-Oct-2019 14:25:53 Step 2/11 : MAINTAINER Rob Kooper build 14-Oct-2019 14:25:53 ---> Running in 8b5417cd77c0 build 14-Oct-2019 14:25:54 Removing intermediate container 8b5417cd77c0 build 14-Oct-2019 14:25:54 ---> 2e9e187f83f3 build 14-Oct-2019 14:25:54 Step 3/11 : VOLUME /matlab build 14-Oct-2019 14:25:55 ---> Running in 0cccbb79db7d build 14-Oct-2019 14:25:55 Removing intermediate container 0cccbb79db7d build 14-Oct-2019 14:25:55 ---> c34b178553b3 build 14-Oct-2019 14:25:55 Step 4/11 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.msc.diagnosis" MATLAB_BINARY="/matlab/bin/matlab" MAIN_SCRIPT="diagnosis.py" build 14-Oct-2019 14:25:56 ---> Running in 291040d1c903 build 14-Oct-2019 14:25:56 Removing intermediate container 291040d1c903 build 14-Oct-2019 14:25:56 ---> 734d9bf215c7 build 14-Oct-2019 14:25:56 Step 5/11 : USER root build 14-Oct-2019 14:25:57 ---> Running in 80366d7409d5 build 14-Oct-2019 14:25:57 Removing intermediate container 80366d7409d5 build 14-Oct-2019 14:25:57 ---> 41786463ca42 build 14-Oct-2019 14:25:57 Step 6/11 : RUN pip install --upgrade pip build 14-Oct-2019 14:25:58 ---> Running in 3ab457874940 build 14-Oct-2019 14:26:00 Collecting pip build 14-Oct-2019 14:26:00 Downloading https://files.pythonhosted.org/packages/4a/08/6ca123073af4ebc4c5488a5bc8a010ac57aa39ce4d3c8a931ad504de4185/pip-19.3-py2.py3-none-any.whl (1.4MB) build 14-Oct-2019 14:26:00 Installing collected packages: pip build 14-Oct-2019 14:26:00 Found existing installation: pip 8.1.1 build 14-Oct-2019 14:26:00 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 14-Oct-2019 14:26:01 Successfully installed pip-19.3 build 14-Oct-2019 14:26:03 Removing intermediate container 3ab457874940 build 14-Oct-2019 14:26:03 ---> 1b6a09d59a85 build 14-Oct-2019 14:26:03 Step 7/11 : RUN apt-get -qq -y update && apt-get -y install libxext6 libxmu6 libxt6 wget && mkdir -p /matlab && rm -rf /var/lib/apt/lists/* build 14-Oct-2019 14:26:04 ---> Running in f13d78f48eea build 14-Oct-2019 14:26:16 Reading package lists... build 14-Oct-2019 14:26:16 Building dependency tree... build 14-Oct-2019 14:26:16 Reading state information... build 14-Oct-2019 14:26:16 The following additional packages will be installed: build 14-Oct-2019 14:26:16 libice6 libidn11 libsm6 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 build 14-Oct-2019 14:26:16 x11-common build 14-Oct-2019 14:26:16 The following NEW packages will be installed: build 14-Oct-2019 14:26:16 libice6 libidn11 libsm6 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 build 14-Oct-2019 14:26:16 libxext6 libxmu6 libxt6 wget x11-common build 14-Oct-2019 14:26:16 0 upgraded, 13 newly installed, 0 to remove and 59 not upgraded. build 14-Oct-2019 14:26:16 Need to get 1402 kB of archives. build 14-Oct-2019 14:26:16 After this operation, 5597 kB of additional disk space will be used. build 14-Oct-2019 14:26:16 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxau6 amd64 1:1.0.8-1 [8376 B] build 14-Oct-2019 14:26:16 Get:2 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxdmcp6 amd64 1:1.1.2-1.1 [11.0 kB] build 14-Oct-2019 14:26:17 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxcb1 amd64 1.11.1-1ubuntu1 [40.0 kB] build 14-Oct-2019 14:26:17 Get:4 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libx11-data all 2:1.6.3-1ubuntu2.1 [113 kB] build 14-Oct-2019 14:26:17 Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libx11-6 amd64 2:1.6.3-1ubuntu2.1 [570 kB] build 14-Oct-2019 14:26:18 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxext6 amd64 2:1.3.3-1 [29.4 kB] build 14-Oct-2019 14:26:18 Get:7 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 x11-common all 1:7.7+13ubuntu3.1 [22.9 kB] build 14-Oct-2019 14:26:19 Get:8 http://archive.ubuntu.com/ubuntu xenial/main amd64 libice6 amd64 2:1.0.9-1 [39.2 kB] build 14-Oct-2019 14:26:19 Get:9 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsm6 amd64 2:1.2.2-1 [15.8 kB] build 14-Oct-2019 14:26:19 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libidn11 amd64 1.32-3ubuntu1.2 [46.5 kB] build 14-Oct-2019 14:26:20 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 wget amd64 1.17.1-1ubuntu1.5 [299 kB] build 14-Oct-2019 14:26:20 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxt6 amd64 1:1.1.5-0ubuntu1 [160 kB] build 14-Oct-2019 14:26:21 Get:13 http://archive.ubuntu.com/ubuntu xenial/main amd64 libxmu6 amd64 2:1.1.2-2 [46.0 kB] build 14-Oct-2019 14:26:22 debconf: delaying package configuration, since apt-utils is not installed build 14-Oct-2019 14:26:22 Fetched 1402 kB in 5s (258 kB/s) build 14-Oct-2019 14:26:23 Selecting previously unselected package libxau6:amd64. build 14-Oct-2019 14:26:23 (Reading database ... build 14-Oct-2019 14:26:23 (Reading database ... 5% build 14-Oct-2019 14:26:23 (Reading database ... 10% build 14-Oct-2019 14:26:23 (Reading database ... 15% build 14-Oct-2019 14:26:23 (Reading database ... 20% build 14-Oct-2019 14:26:23 (Reading database ... 25% build 14-Oct-2019 14:26:23 (Reading database ... 30% build 14-Oct-2019 14:26:23 (Reading database ... 35% build 14-Oct-2019 14:26:23 (Reading database ... 40% build 14-Oct-2019 14:26:23 (Reading database ... 45% build 14-Oct-2019 14:26:23 (Reading database ... 50% build 14-Oct-2019 14:26:23 (Reading database ... 55% build 14-Oct-2019 14:26:23 (Reading database ... 60% build 14-Oct-2019 14:26:23 (Reading database ... 65% build 14-Oct-2019 14:26:23 (Reading database ... 70% build 14-Oct-2019 14:26:23 (Reading database ... 75% build 14-Oct-2019 14:26:23 (Reading database ... 80% build 14-Oct-2019 14:26:23 (Reading database ... 85% build 14-Oct-2019 14:26:23 (Reading database ... 90% build 14-Oct-2019 14:26:23 (Reading database ... 95% build 14-Oct-2019 14:26:23 (Reading database ... 100% build 14-Oct-2019 14:26:23 (Reading database ... 6101 files and directories currently installed.) build 14-Oct-2019 14:26:23 Preparing to unpack .../libxau6_1%3a1.0.8-1_amd64.deb ... build 14-Oct-2019 14:26:23 Unpacking libxau6:amd64 (1:1.0.8-1) ... build 14-Oct-2019 14:26:24 Selecting previously unselected package libxdmcp6:amd64. build 14-Oct-2019 14:26:24 Preparing to unpack .../libxdmcp6_1%3a1.1.2-1.1_amd64.deb ... build 14-Oct-2019 14:26:25 Unpacking libxdmcp6:amd64 (1:1.1.2-1.1) ... build 14-Oct-2019 14:26:26 Selecting previously unselected package libxcb1:amd64. build 14-Oct-2019 14:26:26 Preparing to unpack .../libxcb1_1.11.1-1ubuntu1_amd64.deb ... build 14-Oct-2019 14:26:26 Unpacking libxcb1:amd64 (1.11.1-1ubuntu1) ... build 14-Oct-2019 14:26:28 Selecting previously unselected package libx11-data. build 14-Oct-2019 14:26:28 Preparing to unpack .../libx11-data_2%3a1.6.3-1ubuntu2.1_all.deb ... build 14-Oct-2019 14:26:28 Unpacking libx11-data (2:1.6.3-1ubuntu2.1) ... build 14-Oct-2019 14:26:30 Selecting previously unselected package libx11-6:amd64. build 14-Oct-2019 14:26:30 Preparing to unpack .../libx11-6_2%3a1.6.3-1ubuntu2.1_amd64.deb ... build 14-Oct-2019 14:26:30 Unpacking libx11-6:amd64 (2:1.6.3-1ubuntu2.1) ... build 14-Oct-2019 14:26:32 Selecting previously unselected package libxext6:amd64. build 14-Oct-2019 14:26:32 Preparing to unpack .../libxext6_2%3a1.3.3-1_amd64.deb ... build 14-Oct-2019 14:26:32 Unpacking libxext6:amd64 (2:1.3.3-1) ... build 14-Oct-2019 14:26:33 Selecting previously unselected package x11-common. build 14-Oct-2019 14:26:33 Preparing to unpack .../x11-common_1%3a7.7+13ubuntu3.1_all.deb ... build 14-Oct-2019 14:26:33 dpkg-query: no packages found matching nux-tools build 14-Oct-2019 14:26:33 Unpacking x11-common (1:7.7+13ubuntu3.1) ... build 14-Oct-2019 14:26:34 Selecting previously unselected package libice6:amd64. build 14-Oct-2019 14:26:34 Preparing to unpack .../libice6_2%3a1.0.9-1_amd64.deb ... build 14-Oct-2019 14:26:35 Unpacking libice6:amd64 (2:1.0.9-1) ... build 14-Oct-2019 14:26:35 Selecting previously unselected package libsm6:amd64. build 14-Oct-2019 14:26:35 Preparing to unpack .../libsm6_2%3a1.2.2-1_amd64.deb ... build 14-Oct-2019 14:26:36 Unpacking libsm6:amd64 (2:1.2.2-1) ... build 14-Oct-2019 14:26:37 Selecting previously unselected package libidn11:amd64. build 14-Oct-2019 14:26:37 Preparing to unpack .../libidn11_1.32-3ubuntu1.2_amd64.deb ... build 14-Oct-2019 14:26:37 Unpacking libidn11:amd64 (1.32-3ubuntu1.2) ... build 14-Oct-2019 14:26:38 Selecting previously unselected package wget. build 14-Oct-2019 14:26:38 Preparing to unpack .../wget_1.17.1-1ubuntu1.5_amd64.deb ... build 14-Oct-2019 14:26:38 Unpacking wget (1.17.1-1ubuntu1.5) ... build 14-Oct-2019 14:26:39 Selecting previously unselected package libxt6:amd64. build 14-Oct-2019 14:26:39 Preparing to unpack .../libxt6_1%3a1.1.5-0ubuntu1_amd64.deb ... build 14-Oct-2019 14:26:39 Unpacking libxt6:amd64 (1:1.1.5-0ubuntu1) ... build 14-Oct-2019 14:26:40 Selecting previously unselected package libxmu6:amd64. build 14-Oct-2019 14:26:40 Preparing to unpack .../libxmu6_2%3a1.1.2-2_amd64.deb ... build 14-Oct-2019 14:26:40 Unpacking libxmu6:amd64 (2:1.1.2-2) ... build 14-Oct-2019 14:26:40 Processing triggers for libc-bin (2.23-0ubuntu9) ... build 14-Oct-2019 14:26:40 Processing triggers for systemd (229-4ubuntu19) ... build 14-Oct-2019 14:26:41 Setting up libxau6:amd64 (1:1.0.8-1) ... build 14-Oct-2019 14:26:42 Setting up libxdmcp6:amd64 (1:1.1.2-1.1) ... build 14-Oct-2019 14:26:42 Setting up libxcb1:amd64 (1.11.1-1ubuntu1) ... build 14-Oct-2019 14:26:43 Setting up libx11-data (2:1.6.3-1ubuntu2.1) ... build 14-Oct-2019 14:26:43 Setting up libx11-6:amd64 (2:1.6.3-1ubuntu2.1) ... build 14-Oct-2019 14:26:43 Setting up libxext6:amd64 (2:1.3.3-1) ... build 14-Oct-2019 14:26:43 Setting up x11-common (1:7.7+13ubuntu3.1) ... build 14-Oct-2019 14:26:46 debconf: unable to initialize frontend: Dialog build 14-Oct-2019 14:26:46 debconf: (TERM is not set, so the dialog frontend is not usable.) build 14-Oct-2019 14:26:46 debconf: falling back to frontend: Readline build 14-Oct-2019 14:26:46 debconf: unable to initialize frontend: Readline build 14-Oct-2019 14:26:46 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) build 14-Oct-2019 14:26:46 debconf: falling back to frontend: Teletype build 14-Oct-2019 14:26:46 update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults build 14-Oct-2019 14:26:46 invoke-rc.d: could not determine current runlevel build 14-Oct-2019 14:26:46 invoke-rc.d: policy-rc.d denied execution of start. build 14-Oct-2019 14:26:46 Setting up libice6:amd64 (2:1.0.9-1) ... build 14-Oct-2019 14:26:47 Setting up libsm6:amd64 (2:1.2.2-1) ... build 14-Oct-2019 14:26:47 Setting up libidn11:amd64 (1.32-3ubuntu1.2) ... build 14-Oct-2019 14:26:48 Setting up wget (1.17.1-1ubuntu1.5) ... build 14-Oct-2019 14:26:48 Setting up libxt6:amd64 (1:1.1.5-0ubuntu1) ... build 14-Oct-2019 14:26:48 Setting up libxmu6:amd64 (2:1.1.2-2) ... build 14-Oct-2019 14:26:49 Processing triggers for libc-bin (2.23-0ubuntu9) ... build 14-Oct-2019 14:26:49 Processing triggers for systemd (229-4ubuntu19) ... build 14-Oct-2019 14:26:52 Removing intermediate container f13d78f48eea build 14-Oct-2019 14:26:52 ---> a4fd5861f766 build 14-Oct-2019 14:26:52 Step 8/11 : USER clowder build 14-Oct-2019 14:26:52 ---> Running in f0b937bf40ef build 14-Oct-2019 14:26:53 Removing intermediate container f0b937bf40ef build 14-Oct-2019 14:26:53 ---> 62fe5814c869 build 14-Oct-2019 14:26:53 Step 9/11 : COPY entrypoint.sh *.py *.m data/*.mat *.json /home/clowder/ build 14-Oct-2019 14:26:55 ---> 7938d4b4d0db build 14-Oct-2019 14:26:55 Step 10/11 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 14-Oct-2019 14:26:55 ---> Running in 46e8f9e0d4f2 build 14-Oct-2019 14:26:56 Removing intermediate container 46e8f9e0d4f2 build 14-Oct-2019 14:26:56 ---> bb52b6ba75a3 build 14-Oct-2019 14:26:56 Step 11/11 : CMD ["extractor"] build 14-Oct-2019 14:26:56 ---> Running in 7ddf11a7250f build 14-Oct-2019 14:26:57 Removing intermediate container 7ddf11a7250f build 14-Oct-2019 14:26:57 ---> fd7a6ff85817 build 14-Oct-2019 14:26:57 Successfully built fd7a6ff85817 build 14-Oct-2019 14:26:57 Successfully tagged 6425:latest build 14-Oct-2019 14:26:57 The push refers to repository [docker.io/clowder/extractors-msc-kidney] build 14-Oct-2019 14:26:57 5b13ab2c4873: Preparing build 14-Oct-2019 14:26:57 b9f76c736e84: Preparing build 14-Oct-2019 14:26:57 818491c962c9: Preparing build 14-Oct-2019 14:26:57 0cdb02ac1d86: Preparing build 14-Oct-2019 14:26:57 f2297bdfc824: Preparing build 14-Oct-2019 14:26:57 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:26:57 59669fcdd5eb: Preparing build 14-Oct-2019 14:26:57 7f7a065d245a: Preparing build 14-Oct-2019 14:26:57 f96e6b25195f: Preparing build 14-Oct-2019 14:26:57 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:26:57 59669fcdd5eb: Waiting build 14-Oct-2019 14:26:57 7f7a065d245a: Waiting build 14-Oct-2019 14:26:57 c56153825175: Preparing build 14-Oct-2019 14:26:57 ae620432889d: Preparing build 14-Oct-2019 14:26:57 a2022691bf95: Preparing build 14-Oct-2019 14:26:57 f96e6b25195f: Waiting build 14-Oct-2019 14:26:57 c56153825175: Waiting build 14-Oct-2019 14:26:57 ae620432889d: Waiting build 14-Oct-2019 14:26:57 a2022691bf95: Waiting build 14-Oct-2019 14:26:58 f2297bdfc824: Layer already exists build 14-Oct-2019 14:26:58 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:26:58 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:26:58 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:26:58 7f7a065d245a: Layer already exists build 14-Oct-2019 14:26:58 f96e6b25195f: Layer already exists build 14-Oct-2019 14:26:58 c56153825175: Layer already exists build 14-Oct-2019 14:26:58 ae620432889d: Layer already exists build 14-Oct-2019 14:26:58 a2022691bf95: Layer already exists build 14-Oct-2019 14:26:59 5b13ab2c4873: Pushed build 14-Oct-2019 14:27:00 b9f76c736e84: Pushed build 14-Oct-2019 14:27:00 818491c962c9: Pushed build 14-Oct-2019 14:27:04 browndog_v0.2.0: digest: sha256:68e09ca2852f3adf92f671e2466f98ead039bfca1ad62a9ff061633a4fbd0ad7 size: 2826 build 14-Oct-2019 14:27:04 The push refers to repository [docker.io/clowder/extractors-msc-kidney] build 14-Oct-2019 14:27:04 5b13ab2c4873: Preparing build 14-Oct-2019 14:27:04 b9f76c736e84: Preparing build 14-Oct-2019 14:27:04 818491c962c9: Preparing build 14-Oct-2019 14:27:04 0cdb02ac1d86: Preparing build 14-Oct-2019 14:27:04 f2297bdfc824: Preparing build 14-Oct-2019 14:27:04 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:27:04 59669fcdd5eb: Preparing build 14-Oct-2019 14:27:04 7f7a065d245a: Preparing build 14-Oct-2019 14:27:04 f96e6b25195f: Preparing build 14-Oct-2019 14:27:04 c56153825175: Preparing build 14-Oct-2019 14:27:04 ae620432889d: Preparing build 14-Oct-2019 14:27:04 a2022691bf95: Preparing build 14-Oct-2019 14:27:04 f96e6b25195f: Waiting build 14-Oct-2019 14:27:04 c56153825175: Waiting build 14-Oct-2019 14:27:04 ae620432889d: Waiting build 14-Oct-2019 14:27:04 a2022691bf95: Waiting build 14-Oct-2019 14:27:04 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:27:04 59669fcdd5eb: Waiting build 14-Oct-2019 14:27:04 7f7a065d245a: Waiting build 14-Oct-2019 14:27:04 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:27:04 b9f76c736e84: Layer already exists build 14-Oct-2019 14:27:04 818491c962c9: Layer already exists build 14-Oct-2019 14:27:04 5b13ab2c4873: Layer already exists build 14-Oct-2019 14:27:05 f96e6b25195f: Layer already exists build 14-Oct-2019 14:27:05 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:27:05 7f7a065d245a: Layer already exists build 14-Oct-2019 14:27:05 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:27:05 c56153825175: Layer already exists build 14-Oct-2019 14:27:05 ae620432889d: Layer already exists build 14-Oct-2019 14:27:05 f2297bdfc824: Layer already exists build 14-Oct-2019 14:27:05 a2022691bf95: Layer already exists build 14-Oct-2019 14:27:06 browndog_v0.3.0: digest: sha256:68e09ca2852f3adf92f671e2466f98ead039bfca1ad62a9ff061633a4fbd0ad7 size: 2826 build 14-Oct-2019 14:27:06 The push refers to repository [docker.io/clowder/extractors-msc-kidney] build 14-Oct-2019 14:27:06 5b13ab2c4873: Preparing build 14-Oct-2019 14:27:06 b9f76c736e84: Preparing build 14-Oct-2019 14:27:06 818491c962c9: Preparing build 14-Oct-2019 14:27:06 0cdb02ac1d86: Preparing build 14-Oct-2019 14:27:06 f2297bdfc824: Preparing build 14-Oct-2019 14:27:06 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:27:06 59669fcdd5eb: Preparing build 14-Oct-2019 14:27:06 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:27:06 7f7a065d245a: Preparing build 14-Oct-2019 14:27:06 f96e6b25195f: Preparing build 14-Oct-2019 14:27:06 c56153825175: Preparing build 14-Oct-2019 14:27:06 ae620432889d: Preparing build 14-Oct-2019 14:27:06 a2022691bf95: Preparing build 14-Oct-2019 14:27:06 59669fcdd5eb: Waiting build 14-Oct-2019 14:27:06 7f7a065d245a: Waiting build 14-Oct-2019 14:27:06 f96e6b25195f: Waiting build 14-Oct-2019 14:27:06 c56153825175: Waiting build 14-Oct-2019 14:27:06 ae620432889d: Waiting build 14-Oct-2019 14:27:06 a2022691bf95: Waiting build 14-Oct-2019 14:27:06 b9f76c736e84: Layer already exists build 14-Oct-2019 14:27:06 818491c962c9: Layer already exists build 14-Oct-2019 14:27:06 f2297bdfc824: Layer already exists build 14-Oct-2019 14:27:06 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:27:07 5b13ab2c4873: Layer already exists build 14-Oct-2019 14:27:07 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:27:07 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:27:07 7f7a065d245a: Layer already exists build 14-Oct-2019 14:27:07 f96e6b25195f: Layer already exists build 14-Oct-2019 14:27:07 c56153825175: Layer already exists build 14-Oct-2019 14:27:07 ae620432889d: Layer already exists build 14-Oct-2019 14:27:07 a2022691bf95: Layer already exists build 14-Oct-2019 14:27:07 latest: digest: sha256:68e09ca2852f3adf92f671e2466f98ead039bfca1ad62a9ff061633a4fbd0ad7 size: 2826 build 14-Oct-2019 14:27:07 Untagged: 6425:latest build 14-Oct-2019 14:27:08 Sending build context to Docker daemon 67.07kB build 14-Oct-2019 14:27:08 build 14-Oct-2019 14:27:08 Step 1/11 : FROM clowder/pyclowder:1 build 14-Oct-2019 14:27:08 ---> d1a9e970ed30 build 14-Oct-2019 14:27:08 Step 2/11 : MAINTAINER Yan Zhao build 14-Oct-2019 14:27:08 ---> Running in 8803020707f0 build 14-Oct-2019 14:27:08 Removing intermediate container 8803020707f0 build 14-Oct-2019 14:27:08 ---> 44d958d7f080 build 14-Oct-2019 14:27:08 Step 3/11 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.msc.IsletExtractor" MONGO_URI="" DB_USERNAME="" DB_PASSWORD="" MAIN_SCRIPT="extractor-Islet.py" build 14-Oct-2019 14:27:09 ---> Running in 8c111e4cfc90 build 14-Oct-2019 14:27:10 Removing intermediate container 8c111e4cfc90 build 14-Oct-2019 14:27:10 ---> a2933c47ad20 build 14-Oct-2019 14:27:10 Step 4/11 : USER root build 14-Oct-2019 14:27:10 ---> Running in 48aee9f371bd build 14-Oct-2019 14:27:11 Removing intermediate container 48aee9f371bd build 14-Oct-2019 14:27:11 ---> 6c536dcf1fca build 14-Oct-2019 14:27:11 Step 5/11 : COPY requirements.txt /home/clowder/ build 14-Oct-2019 14:27:12 ---> e6075ef29cac build 14-Oct-2019 14:27:12 Step 6/11 : RUN pip install --upgrade pip build 14-Oct-2019 14:27:12 ---> Running in 0e55ff0adaa1 build 14-Oct-2019 14:27:15 Collecting pip build 14-Oct-2019 14:27:15 Downloading https://files.pythonhosted.org/packages/4a/08/6ca123073af4ebc4c5488a5bc8a010ac57aa39ce4d3c8a931ad504de4185/pip-19.3-py2.py3-none-any.whl (1.4MB) build 14-Oct-2019 14:27:15 Installing collected packages: pip build 14-Oct-2019 14:27:15 Found existing installation: pip 8.1.1 build 14-Oct-2019 14:27:15 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 14-Oct-2019 14:27:16 Successfully installed pip-19.3 build 14-Oct-2019 14:27:18 Removing intermediate container 0e55ff0adaa1 build 14-Oct-2019 14:27:18 ---> e941fb9f1fbe build 14-Oct-2019 14:27:18 Step 7/11 : RUN pip install -r /home/clowder/requirements.txt build 14-Oct-2019 14:27:18 ---> Running in 0e9a90416ce2 build 14-Oct-2019 14:27:20 DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support build 14-Oct-2019 14:27:20 Requirement already satisfied: argparse==1.2.1 in /usr/lib/python2.7 (from -r /home/clowder/requirements.txt (line 1)) (1.2.1) build 14-Oct-2019 14:27:20 Collecting openpyxl==1.6.2 build 14-Oct-2019 14:27:20 Downloading https://files.pythonhosted.org/packages/96/53/3782b6cc03500c0949a7ba9dba0c70da95d63d0ed4a04446123987ff983f/openpyxl-1.6.2.tar.gz (199kB) build 14-Oct-2019 14:27:20 Collecting pika==0.9.14 build 14-Oct-2019 14:27:20 Downloading https://files.pythonhosted.org/packages/2b/5b/4c5b6eafc63e0985b926267579a1e2534af70df0a45932f0c23fcc5f1b88/pika-0.9.14.tar.gz (72kB) build 14-Oct-2019 14:27:21 Collecting pymongo==3.2.1 build 14-Oct-2019 14:27:21 Downloading https://files.pythonhosted.org/packages/d7/94/9aa9ddd3e885caa307c0db8af5a1f5d266d3db44e1ae89bd4e14841ab8d0/pymongo-3.2.1.tar.gz (647kB) build 14-Oct-2019 14:27:22 Collecting pytz==2014.3 build 14-Oct-2019 14:27:22 Downloading https://files.pythonhosted.org/packages/e2/8d/af599c0388f46775c6b039d8b9c4acda2f6ef86787312a35291fff4cb7ca/pytz-2014.3.tar.bz2 (158kB) build 14-Oct-2019 14:27:23 Collecting requests==2.2.1 build 14-Oct-2019 14:27:23 Downloading https://files.pythonhosted.org/packages/7d/15/6efffc6aee666e1456852c2bf1d483b46bf971a2d509b35a98fc3eae1c60/requests-2.2.1-py2.py3-none-any.whl (625kB) build 14-Oct-2019 14:27:23 Requirement already satisfied: wsgiref==0.1.2 in /usr/lib/python2.7 (from -r /home/clowder/requirements.txt (line 7)) (0.1.2) build 14-Oct-2019 14:27:23 Collecting xlrd==0.9.3 build 14-Oct-2019 14:27:23 Downloading https://files.pythonhosted.org/packages/b1/13/6fbcb55fef0b34c70cb3753741eaafc0e91553a1318653587a7d145caf15/xlrd-0.9.3.tar.gz (178kB) build 14-Oct-2019 14:27:24 Installing collected packages: openpyxl, pika, pymongo, pytz, requests, xlrd build 14-Oct-2019 14:27:24 Running setup.py install for openpyxl: started build 14-Oct-2019 14:27:24 Running setup.py install for openpyxl: finished with status 'done' build 14-Oct-2019 14:27:24 Found existing installation: pika 0.11.0 build 14-Oct-2019 14:27:24 Uninstalling pika-0.11.0: build 14-Oct-2019 14:27:24 Successfully uninstalled pika-0.11.0 build 14-Oct-2019 14:27:24 Running setup.py install for pika: started build 14-Oct-2019 14:27:24 Running setup.py install for pika: finished with status 'done' build 14-Oct-2019 14:27:24 Running setup.py install for pymongo: started build 14-Oct-2019 14:27:25 Running setup.py install for pymongo: finished with status 'done' build 14-Oct-2019 14:27:25 Running setup.py install for pytz: started build 14-Oct-2019 14:27:25 Running setup.py install for pytz: finished with status 'done' build 14-Oct-2019 14:27:25 Found existing installation: requests 2.18.4 build 14-Oct-2019 14:27:25 Uninstalling requests-2.18.4: build 14-Oct-2019 14:27:25 Successfully uninstalled requests-2.18.4 build 14-Oct-2019 14:27:26 Running setup.py install for xlrd: started build 14-Oct-2019 14:27:26 Running setup.py install for xlrd: finished with status 'done' build 14-Oct-2019 14:27:26 Successfully installed openpyxl-1.6.2 pika-0.9.14 pymongo-3.2.1 pytz-2014.3 requests-2.2.1 xlrd-0.9.3 build 14-Oct-2019 14:27:28 Removing intermediate container 0e9a90416ce2 build 14-Oct-2019 14:27:28 ---> 7f1820bc330d build 14-Oct-2019 14:27:28 Step 8/11 : USER clowder build 14-Oct-2019 14:27:29 ---> Running in 89c36933e220 build 14-Oct-2019 14:27:29 Removing intermediate container 89c36933e220 build 14-Oct-2019 14:27:29 ---> c4d3179d9bcf build 14-Oct-2019 14:27:29 Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/ build 14-Oct-2019 14:27:31 ---> 2037da8d554f build 14-Oct-2019 14:27:31 Step 10/11 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 14-Oct-2019 14:27:31 ---> Running in cf206bc9a2b6 build 14-Oct-2019 14:27:32 Removing intermediate container cf206bc9a2b6 build 14-Oct-2019 14:27:32 ---> 79e504c230ac build 14-Oct-2019 14:27:32 Step 11/11 : CMD ["extractor"] build 14-Oct-2019 14:27:32 ---> Running in 04f8389db2d9 build 14-Oct-2019 14:27:33 Removing intermediate container 04f8389db2d9 build 14-Oct-2019 14:27:33 ---> faefcf97d9ca build 14-Oct-2019 14:27:33 Successfully built faefcf97d9ca build 14-Oct-2019 14:27:33 Successfully tagged 6425:latest build 14-Oct-2019 14:27:34 The push refers to repository [docker.io/clowder/extractors-msc-islet] build 14-Oct-2019 14:27:34 145dc835726b: Preparing build 14-Oct-2019 14:27:34 8a47f8ddc692: Preparing build 14-Oct-2019 14:27:34 37a74ce00bc8: Preparing build 14-Oct-2019 14:27:34 9b1f00be7344: Preparing build 14-Oct-2019 14:27:34 0cdb02ac1d86: Preparing build 14-Oct-2019 14:27:34 f2297bdfc824: Preparing build 14-Oct-2019 14:27:34 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:27:34 59669fcdd5eb: Preparing build 14-Oct-2019 14:27:34 7f7a065d245a: Preparing build 14-Oct-2019 14:27:34 f96e6b25195f: Preparing build 14-Oct-2019 14:27:34 c56153825175: Preparing build 14-Oct-2019 14:27:34 ae620432889d: Preparing build 14-Oct-2019 14:27:34 a2022691bf95: Preparing build 14-Oct-2019 14:27:34 f2297bdfc824: Waiting build 14-Oct-2019 14:27:34 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:27:34 59669fcdd5eb: Waiting build 14-Oct-2019 14:27:34 7f7a065d245a: Waiting build 14-Oct-2019 14:27:34 ae620432889d: Waiting build 14-Oct-2019 14:27:34 f96e6b25195f: Waiting build 14-Oct-2019 14:27:34 c56153825175: Waiting build 14-Oct-2019 14:27:34 a2022691bf95: Waiting build 14-Oct-2019 14:27:34 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:27:35 f2297bdfc824: Layer already exists build 14-Oct-2019 14:27:35 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:27:35 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:27:35 7f7a065d245a: Layer already exists build 14-Oct-2019 14:27:36 9b1f00be7344: Pushed build 14-Oct-2019 14:27:36 145dc835726b: Pushed build 14-Oct-2019 14:27:36 f96e6b25195f: Layer already exists build 14-Oct-2019 14:27:36 c56153825175: Layer already exists build 14-Oct-2019 14:27:36 ae620432889d: Layer already exists build 14-Oct-2019 14:27:36 a2022691bf95: Layer already exists build 14-Oct-2019 14:27:37 8a47f8ddc692: Pushed build 14-Oct-2019 14:27:42 37a74ce00bc8: Pushed build 14-Oct-2019 14:27:44 browndog_v0.2.0: digest: sha256:cf7edeefc094b5887eae741b282e2ef6cb1e997867f3994730202ec075b75844 size: 3031 build 14-Oct-2019 14:27:44 The push refers to repository [docker.io/clowder/extractors-msc-islet] build 14-Oct-2019 14:27:44 145dc835726b: Preparing build 14-Oct-2019 14:27:44 8a47f8ddc692: Preparing build 14-Oct-2019 14:27:44 37a74ce00bc8: Preparing build 14-Oct-2019 14:27:44 9b1f00be7344: Preparing build 14-Oct-2019 14:27:44 0cdb02ac1d86: Preparing build 14-Oct-2019 14:27:44 f2297bdfc824: Preparing build 14-Oct-2019 14:27:44 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:27:44 59669fcdd5eb: Preparing build 14-Oct-2019 14:27:44 7f7a065d245a: Preparing build 14-Oct-2019 14:27:44 f96e6b25195f: Preparing build 14-Oct-2019 14:27:44 c56153825175: Preparing build 14-Oct-2019 14:27:44 ae620432889d: Preparing build 14-Oct-2019 14:27:44 a2022691bf95: Preparing build 14-Oct-2019 14:27:44 f2297bdfc824: Waiting build 14-Oct-2019 14:27:44 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:27:44 59669fcdd5eb: Waiting build 14-Oct-2019 14:27:44 7f7a065d245a: Waiting build 14-Oct-2019 14:27:44 f96e6b25195f: Waiting build 14-Oct-2019 14:27:44 c56153825175: Waiting build 14-Oct-2019 14:27:44 ae620432889d: Waiting build 14-Oct-2019 14:27:44 a2022691bf95: Waiting build 14-Oct-2019 14:27:45 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:27:45 145dc835726b: Layer already exists build 14-Oct-2019 14:27:45 37a74ce00bc8: Layer already exists build 14-Oct-2019 14:27:45 8a47f8ddc692: Layer already exists build 14-Oct-2019 14:27:45 9b1f00be7344: Layer already exists build 14-Oct-2019 14:27:45 f2297bdfc824: Layer already exists build 14-Oct-2019 14:27:45 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:27:45 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:27:45 7f7a065d245a: Layer already exists build 14-Oct-2019 14:27:45 f96e6b25195f: Layer already exists build 14-Oct-2019 14:27:45 c56153825175: Layer already exists build 14-Oct-2019 14:27:45 a2022691bf95: Layer already exists build 14-Oct-2019 14:27:45 ae620432889d: Layer already exists build 14-Oct-2019 14:27:46 browndog_v0.3.0: digest: sha256:cf7edeefc094b5887eae741b282e2ef6cb1e997867f3994730202ec075b75844 size: 3031 build 14-Oct-2019 14:27:46 The push refers to repository [docker.io/clowder/extractors-msc-islet] build 14-Oct-2019 14:27:46 145dc835726b: Preparing build 14-Oct-2019 14:27:46 8a47f8ddc692: Preparing build 14-Oct-2019 14:27:46 37a74ce00bc8: Preparing build 14-Oct-2019 14:27:46 9b1f00be7344: Preparing build 14-Oct-2019 14:27:46 0cdb02ac1d86: Preparing build 14-Oct-2019 14:27:46 f2297bdfc824: Preparing build 14-Oct-2019 14:27:46 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:27:46 59669fcdd5eb: Preparing build 14-Oct-2019 14:27:46 7f7a065d245a: Preparing build 14-Oct-2019 14:27:46 f96e6b25195f: Preparing build 14-Oct-2019 14:27:46 c56153825175: Preparing build 14-Oct-2019 14:27:46 ae620432889d: Preparing build 14-Oct-2019 14:27:46 a2022691bf95: Preparing build 14-Oct-2019 14:27:46 59669fcdd5eb: Waiting build 14-Oct-2019 14:27:46 f2297bdfc824: Waiting build 14-Oct-2019 14:27:46 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:27:46 c56153825175: Waiting build 14-Oct-2019 14:27:46 7f7a065d245a: Waiting build 14-Oct-2019 14:27:46 f96e6b25195f: Waiting build 14-Oct-2019 14:27:46 ae620432889d: Waiting build 14-Oct-2019 14:27:46 a2022691bf95: Waiting build 14-Oct-2019 14:27:47 37a74ce00bc8: Layer already exists build 14-Oct-2019 14:27:47 9b1f00be7344: Layer already exists build 14-Oct-2019 14:27:47 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:27:47 8a47f8ddc692: Layer already exists build 14-Oct-2019 14:27:47 145dc835726b: Layer already exists build 14-Oct-2019 14:27:47 f2297bdfc824: Layer already exists build 14-Oct-2019 14:27:47 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:27:47 f96e6b25195f: Layer already exists build 14-Oct-2019 14:27:47 7f7a065d245a: Layer already exists build 14-Oct-2019 14:27:47 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:27:47 c56153825175: Layer already exists build 14-Oct-2019 14:27:47 ae620432889d: Layer already exists build 14-Oct-2019 14:27:47 a2022691bf95: Layer already exists build 14-Oct-2019 14:27:48 latest: digest: sha256:cf7edeefc094b5887eae741b282e2ef6cb1e997867f3994730202ec075b75844 size: 3031 build 14-Oct-2019 14:27:48 Untagged: 6425:latest build 14-Oct-2019 14:27:48 Sending build context to Docker daemon 66.05kB build 14-Oct-2019 14:27:48 build 14-Oct-2019 14:27:48 Step 1/11 : FROM clowder/pyclowder:1 build 14-Oct-2019 14:27:48 ---> d1a9e970ed30 build 14-Oct-2019 14:27:48 Step 2/11 : MAINTAINER Yan Zhao build 14-Oct-2019 14:27:48 ---> Using cache build 14-Oct-2019 14:27:48 ---> 44d958d7f080 build 14-Oct-2019 14:27:48 Step 3/11 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.msc.ChemCBCExtractor" MONGO_URI="" DB_USERNAME="" DB_PASSWORD="" MAIN_SCRIPT="extractor-Chem.py" build 14-Oct-2019 14:27:48 ---> Running in a0221f5bd39f build 14-Oct-2019 14:27:49 Removing intermediate container a0221f5bd39f build 14-Oct-2019 14:27:49 ---> deee1cdd19a0 build 14-Oct-2019 14:27:49 Step 4/11 : USER root build 14-Oct-2019 14:27:49 ---> Running in 4854b1f74d86 build 14-Oct-2019 14:27:50 Removing intermediate container 4854b1f74d86 build 14-Oct-2019 14:27:50 ---> c0daf5415fd3 build 14-Oct-2019 14:27:50 Step 5/11 : COPY requirements.txt /home/clowder/ build 14-Oct-2019 14:27:50 ---> 99630fec015e build 14-Oct-2019 14:27:50 Step 6/11 : RUN pip install --upgrade pip build 14-Oct-2019 14:27:51 ---> Running in 961b21dc0adb build 14-Oct-2019 14:27:53 Collecting pip build 14-Oct-2019 14:27:53 Downloading https://files.pythonhosted.org/packages/4a/08/6ca123073af4ebc4c5488a5bc8a010ac57aa39ce4d3c8a931ad504de4185/pip-19.3-py2.py3-none-any.whl (1.4MB) build 14-Oct-2019 14:27:53 Installing collected packages: pip build 14-Oct-2019 14:27:53 Found existing installation: pip 8.1.1 build 14-Oct-2019 14:27:53 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 14-Oct-2019 14:27:54 Successfully installed pip-19.3 build 14-Oct-2019 14:27:56 Removing intermediate container 961b21dc0adb build 14-Oct-2019 14:27:56 ---> 8a598b7ec959 build 14-Oct-2019 14:27:56 Step 7/11 : RUN pip install -r /home/clowder/requirements.txt build 14-Oct-2019 14:27:57 ---> Running in f6b03dec85ce build 14-Oct-2019 14:27:58 DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support build 14-Oct-2019 14:27:58 Requirement already satisfied: argparse==1.2.1 in /usr/lib/python2.7 (from -r /home/clowder/requirements.txt (line 1)) (1.2.1) build 14-Oct-2019 14:27:59 Collecting openpyxl==1.6.2 build 14-Oct-2019 14:27:59 Downloading https://files.pythonhosted.org/packages/96/53/3782b6cc03500c0949a7ba9dba0c70da95d63d0ed4a04446123987ff983f/openpyxl-1.6.2.tar.gz (199kB) build 14-Oct-2019 14:27:59 Collecting pika==0.9.14 build 14-Oct-2019 14:27:59 Downloading https://files.pythonhosted.org/packages/2b/5b/4c5b6eafc63e0985b926267579a1e2534af70df0a45932f0c23fcc5f1b88/pika-0.9.14.tar.gz (72kB) build 14-Oct-2019 14:28:01 Collecting pymongo==3.2.1 build 14-Oct-2019 14:28:01 Downloading https://files.pythonhosted.org/packages/d7/94/9aa9ddd3e885caa307c0db8af5a1f5d266d3db44e1ae89bd4e14841ab8d0/pymongo-3.2.1.tar.gz (647kB) build 14-Oct-2019 14:28:01 Collecting pytz==2014.3 build 14-Oct-2019 14:28:01 Downloading https://files.pythonhosted.org/packages/e2/8d/af599c0388f46775c6b039d8b9c4acda2f6ef86787312a35291fff4cb7ca/pytz-2014.3.tar.bz2 (158kB) build 14-Oct-2019 14:28:02 Collecting requests==2.2.1 build 14-Oct-2019 14:28:02 Downloading https://files.pythonhosted.org/packages/7d/15/6efffc6aee666e1456852c2bf1d483b46bf971a2d509b35a98fc3eae1c60/requests-2.2.1-py2.py3-none-any.whl (625kB) build 14-Oct-2019 14:28:03 Requirement already satisfied: wsgiref==0.1.2 in /usr/lib/python2.7 (from -r /home/clowder/requirements.txt (line 7)) (0.1.2) build 14-Oct-2019 14:28:03 Collecting xlrd==0.9.3 build 14-Oct-2019 14:28:03 Downloading https://files.pythonhosted.org/packages/b1/13/6fbcb55fef0b34c70cb3753741eaafc0e91553a1318653587a7d145caf15/xlrd-0.9.3.tar.gz (178kB) build 14-Oct-2019 14:28:03 Installing collected packages: openpyxl, pika, pymongo, pytz, requests, xlrd build 14-Oct-2019 14:28:03 Running setup.py install for openpyxl: started build 14-Oct-2019 14:28:03 Running setup.py install for openpyxl: finished with status 'done' build 14-Oct-2019 14:28:03 Found existing installation: pika 0.11.0 build 14-Oct-2019 14:28:03 Uninstalling pika-0.11.0: build 14-Oct-2019 14:28:03 Successfully uninstalled pika-0.11.0 build 14-Oct-2019 14:28:03 Running setup.py install for pika: started build 14-Oct-2019 14:28:04 Running setup.py install for pika: finished with status 'done' build 14-Oct-2019 14:28:04 Running setup.py install for pymongo: started build 14-Oct-2019 14:28:04 Running setup.py install for pymongo: finished with status 'done' build 14-Oct-2019 14:28:04 Running setup.py install for pytz: started build 14-Oct-2019 14:28:05 Running setup.py install for pytz: finished with status 'done' build 14-Oct-2019 14:28:05 Found existing installation: requests 2.18.4 build 14-Oct-2019 14:28:05 Uninstalling requests-2.18.4: build 14-Oct-2019 14:28:05 Successfully uninstalled requests-2.18.4 build 14-Oct-2019 14:28:05 Running setup.py install for xlrd: started build 14-Oct-2019 14:28:05 Running setup.py install for xlrd: finished with status 'done' build 14-Oct-2019 14:28:05 Successfully installed openpyxl-1.6.2 pika-0.9.14 pymongo-3.2.1 pytz-2014.3 requests-2.2.1 xlrd-0.9.3 build 14-Oct-2019 14:28:08 Removing intermediate container f6b03dec85ce build 14-Oct-2019 14:28:08 ---> 693da8028561 build 14-Oct-2019 14:28:08 Step 8/11 : USER clowder build 14-Oct-2019 14:28:08 ---> Running in 9e105db23643 build 14-Oct-2019 14:28:09 Removing intermediate container 9e105db23643 build 14-Oct-2019 14:28:09 ---> 58f29dca427a build 14-Oct-2019 14:28:09 Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/ build 14-Oct-2019 14:28:11 ---> 29798d378c4e build 14-Oct-2019 14:28:11 Step 10/11 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 14-Oct-2019 14:28:11 ---> Running in 58f114579290 build 14-Oct-2019 14:28:13 Removing intermediate container 58f114579290 build 14-Oct-2019 14:28:13 ---> 5203ac8fd195 build 14-Oct-2019 14:28:13 Step 11/11 : CMD ["extractor"] build 14-Oct-2019 14:28:14 ---> Running in 16fd3cf76ef2 build 14-Oct-2019 14:28:15 Removing intermediate container 16fd3cf76ef2 build 14-Oct-2019 14:28:15 ---> 203284efbb9e build 14-Oct-2019 14:28:15 Successfully built 203284efbb9e build 14-Oct-2019 14:28:15 Successfully tagged 6425:latest build 14-Oct-2019 14:28:16 The push refers to repository [docker.io/clowder/extractors-msc-chemcbc] build 14-Oct-2019 14:28:16 570961f93155: Preparing build 14-Oct-2019 14:28:16 2cd7b4454c9d: Preparing build 14-Oct-2019 14:28:16 0805aae57ba9: Preparing build 14-Oct-2019 14:28:16 5b690d815bf2: Preparing build 14-Oct-2019 14:28:16 0cdb02ac1d86: Preparing build 14-Oct-2019 14:28:16 f2297bdfc824: Preparing build 14-Oct-2019 14:28:16 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:28:16 59669fcdd5eb: Preparing build 14-Oct-2019 14:28:16 7f7a065d245a: Preparing build 14-Oct-2019 14:28:16 f96e6b25195f: Preparing build 14-Oct-2019 14:28:16 c56153825175: Preparing build 14-Oct-2019 14:28:16 ae620432889d: Preparing build 14-Oct-2019 14:28:16 a2022691bf95: Preparing build 14-Oct-2019 14:28:16 59669fcdd5eb: Waiting build 14-Oct-2019 14:28:16 7f7a065d245a: Waiting build 14-Oct-2019 14:28:16 f96e6b25195f: Waiting build 14-Oct-2019 14:28:16 c56153825175: Waiting build 14-Oct-2019 14:28:16 ae620432889d: Waiting build 14-Oct-2019 14:28:16 a2022691bf95: Waiting build 14-Oct-2019 14:28:16 f2297bdfc824: Waiting build 14-Oct-2019 14:28:16 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:28:16 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:28:17 f2297bdfc824: Layer already exists build 14-Oct-2019 14:28:17 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:28:17 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:28:17 7f7a065d245a: Layer already exists build 14-Oct-2019 14:28:18 f96e6b25195f: Layer already exists build 14-Oct-2019 14:28:18 5b690d815bf2: Pushed build 14-Oct-2019 14:28:18 c56153825175: Layer already exists build 14-Oct-2019 14:28:18 570961f93155: Pushed build 14-Oct-2019 14:28:18 ae620432889d: Layer already exists build 14-Oct-2019 14:28:18 a2022691bf95: Layer already exists build 14-Oct-2019 14:28:19 0805aae57ba9: Pushed build 14-Oct-2019 14:28:19 2cd7b4454c9d: Pushed build 14-Oct-2019 14:28:21 browndog_v0.2.0: digest: sha256:f0329a7ace2e7ac25df26a6e0dce05b2281e7bd96892f3b8e061b51123d79eb4 size: 3031 build 14-Oct-2019 14:28:22 The push refers to repository [docker.io/clowder/extractors-msc-chemcbc] build 14-Oct-2019 14:28:22 570961f93155: Preparing build 14-Oct-2019 14:28:22 2cd7b4454c9d: Preparing build 14-Oct-2019 14:28:22 0805aae57ba9: Preparing build 14-Oct-2019 14:28:22 5b690d815bf2: Preparing build 14-Oct-2019 14:28:22 0cdb02ac1d86: Preparing build 14-Oct-2019 14:28:22 f2297bdfc824: Preparing build 14-Oct-2019 14:28:22 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:28:22 59669fcdd5eb: Preparing build 14-Oct-2019 14:28:22 7f7a065d245a: Preparing build 14-Oct-2019 14:28:22 f96e6b25195f: Preparing build 14-Oct-2019 14:28:22 c56153825175: Preparing build 14-Oct-2019 14:28:22 ae620432889d: Preparing build 14-Oct-2019 14:28:22 a2022691bf95: Preparing build 14-Oct-2019 14:28:22 f2297bdfc824: Waiting build 14-Oct-2019 14:28:22 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:28:22 59669fcdd5eb: Waiting build 14-Oct-2019 14:28:22 7f7a065d245a: Waiting build 14-Oct-2019 14:28:22 f96e6b25195f: Waiting build 14-Oct-2019 14:28:22 c56153825175: Waiting build 14-Oct-2019 14:28:22 ae620432889d: Waiting build 14-Oct-2019 14:28:22 a2022691bf95: Waiting build 14-Oct-2019 14:28:22 2cd7b4454c9d: Layer already exists build 14-Oct-2019 14:28:22 5b690d815bf2: Layer already exists build 14-Oct-2019 14:28:22 570961f93155: Layer already exists build 14-Oct-2019 14:28:22 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:28:22 0805aae57ba9: Layer already exists build 14-Oct-2019 14:28:23 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:28:23 f2297bdfc824: Layer already exists build 14-Oct-2019 14:28:23 7f7a065d245a: Layer already exists build 14-Oct-2019 14:28:23 f96e6b25195f: Layer already exists build 14-Oct-2019 14:28:23 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:28:23 c56153825175: Layer already exists build 14-Oct-2019 14:28:23 ae620432889d: Layer already exists build 14-Oct-2019 14:28:23 a2022691bf95: Layer already exists build 14-Oct-2019 14:28:23 browndog_v0.3.0: digest: sha256:f0329a7ace2e7ac25df26a6e0dce05b2281e7bd96892f3b8e061b51123d79eb4 size: 3031 build 14-Oct-2019 14:28:24 The push refers to repository [docker.io/clowder/extractors-msc-chemcbc] build 14-Oct-2019 14:28:24 570961f93155: Preparing build 14-Oct-2019 14:28:24 2cd7b4454c9d: Preparing build 14-Oct-2019 14:28:24 0805aae57ba9: Preparing build 14-Oct-2019 14:28:24 5b690d815bf2: Preparing build 14-Oct-2019 14:28:24 0cdb02ac1d86: Preparing build 14-Oct-2019 14:28:24 f2297bdfc824: Preparing build 14-Oct-2019 14:28:24 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:28:24 59669fcdd5eb: Preparing build 14-Oct-2019 14:28:24 7f7a065d245a: Preparing build 14-Oct-2019 14:28:24 f96e6b25195f: Preparing build 14-Oct-2019 14:28:24 c56153825175: Preparing build 14-Oct-2019 14:28:24 ae620432889d: Preparing build 14-Oct-2019 14:28:24 a2022691bf95: Preparing build 14-Oct-2019 14:28:24 f2297bdfc824: Waiting build 14-Oct-2019 14:28:24 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:28:24 59669fcdd5eb: Waiting build 14-Oct-2019 14:28:24 7f7a065d245a: Waiting build 14-Oct-2019 14:28:24 f96e6b25195f: Waiting build 14-Oct-2019 14:28:24 c56153825175: Waiting build 14-Oct-2019 14:28:24 ae620432889d: Waiting build 14-Oct-2019 14:28:24 570961f93155: Layer already exists build 14-Oct-2019 14:28:24 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:28:24 0805aae57ba9: Layer already exists build 14-Oct-2019 14:28:24 5b690d815bf2: Layer already exists build 14-Oct-2019 14:28:24 2cd7b4454c9d: Layer already exists build 14-Oct-2019 14:28:24 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:28:24 7f7a065d245a: Layer already exists build 14-Oct-2019 14:28:24 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:28:24 f96e6b25195f: Layer already exists build 14-Oct-2019 14:28:24 f2297bdfc824: Layer already exists build 14-Oct-2019 14:28:25 a2022691bf95: Layer already exists build 14-Oct-2019 14:28:25 c56153825175: Layer already exists build 14-Oct-2019 14:28:25 ae620432889d: Layer already exists build 14-Oct-2019 14:28:25 latest: digest: sha256:f0329a7ace2e7ac25df26a6e0dce05b2281e7bd96892f3b8e061b51123d79eb4 size: 3031 build 14-Oct-2019 14:28:25 Untagged: 6425:latest build 14-Oct-2019 14:28:25 Sending build context to Docker daemon 198.1kB build 14-Oct-2019 14:28:25 build 14-Oct-2019 14:28:26 Step 1/11 : FROM clowder/pyclowder:1 build 14-Oct-2019 14:28:26 ---> d1a9e970ed30 build 14-Oct-2019 14:28:26 Step 2/11 : MAINTAINER Yan Zhao build 14-Oct-2019 14:28:26 ---> Using cache build 14-Oct-2019 14:28:26 ---> 44d958d7f080 build 14-Oct-2019 14:28:26 Step 3/11 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.msc.MonitorExtractor" MONGO_URI="" DB_USERNAME="" DB_PASSWORD="" MAIN_SCRIPT="extractor-Monitor.py" build 14-Oct-2019 14:28:26 ---> Running in ae9f3e56923a build 14-Oct-2019 14:28:28 Removing intermediate container ae9f3e56923a build 14-Oct-2019 14:28:28 ---> c341877b4538 build 14-Oct-2019 14:28:28 Step 4/11 : USER root build 14-Oct-2019 14:28:28 ---> Running in 984402cd75d1 build 14-Oct-2019 14:28:30 Removing intermediate container 984402cd75d1 build 14-Oct-2019 14:28:30 ---> 557d18a80782 build 14-Oct-2019 14:28:30 Step 5/11 : COPY requirements.txt /home/clowder/ build 14-Oct-2019 14:28:31 ---> 83e051313530 build 14-Oct-2019 14:28:31 Step 6/11 : RUN pip install --upgrade pip build 14-Oct-2019 14:28:32 ---> Running in bf077b1ad448 build 14-Oct-2019 14:28:34 Collecting pip build 14-Oct-2019 14:28:34 Downloading https://files.pythonhosted.org/packages/4a/08/6ca123073af4ebc4c5488a5bc8a010ac57aa39ce4d3c8a931ad504de4185/pip-19.3-py2.py3-none-any.whl (1.4MB) build 14-Oct-2019 14:28:34 Installing collected packages: pip build 14-Oct-2019 14:28:34 Found existing installation: pip 8.1.1 build 14-Oct-2019 14:28:34 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 14-Oct-2019 14:28:35 Successfully installed pip-19.3 build 14-Oct-2019 14:28:38 Removing intermediate container bf077b1ad448 build 14-Oct-2019 14:28:38 ---> 307013a99ef2 build 14-Oct-2019 14:28:38 Step 7/11 : RUN pip install -r /home/clowder/requirements.txt build 14-Oct-2019 14:28:39 ---> Running in 4d4ad1429dcf build 14-Oct-2019 14:28:41 DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support build 14-Oct-2019 14:28:41 Requirement already satisfied: argparse==1.2.1 in /usr/lib/python2.7 (from -r /home/clowder/requirements.txt (line 1)) (1.2.1) build 14-Oct-2019 14:28:41 Collecting openpyxl==1.6.2 build 14-Oct-2019 14:28:41 Downloading https://files.pythonhosted.org/packages/96/53/3782b6cc03500c0949a7ba9dba0c70da95d63d0ed4a04446123987ff983f/openpyxl-1.6.2.tar.gz (199kB) build 14-Oct-2019 14:28:42 Collecting pika==0.9.14 build 14-Oct-2019 14:28:42 Downloading https://files.pythonhosted.org/packages/2b/5b/4c5b6eafc63e0985b926267579a1e2534af70df0a45932f0c23fcc5f1b88/pika-0.9.14.tar.gz (72kB) build 14-Oct-2019 14:28:43 Collecting pymongo==3.2.1 build 14-Oct-2019 14:28:43 Downloading https://files.pythonhosted.org/packages/d7/94/9aa9ddd3e885caa307c0db8af5a1f5d266d3db44e1ae89bd4e14841ab8d0/pymongo-3.2.1.tar.gz (647kB) build 14-Oct-2019 14:28:44 Collecting pytz==2014.3 build 14-Oct-2019 14:28:44 Downloading https://files.pythonhosted.org/packages/e2/8d/af599c0388f46775c6b039d8b9c4acda2f6ef86787312a35291fff4cb7ca/pytz-2014.3.tar.bz2 (158kB) build 14-Oct-2019 14:28:45 Collecting requests==2.2.1 build 14-Oct-2019 14:28:45 Downloading https://files.pythonhosted.org/packages/7d/15/6efffc6aee666e1456852c2bf1d483b46bf971a2d509b35a98fc3eae1c60/requests-2.2.1-py2.py3-none-any.whl (625kB) build 14-Oct-2019 14:28:45 Requirement already satisfied: wsgiref==0.1.2 in /usr/lib/python2.7 (from -r /home/clowder/requirements.txt (line 7)) (0.1.2) build 14-Oct-2019 14:28:45 Collecting xlrd==0.9.3 build 14-Oct-2019 14:28:45 Downloading https://files.pythonhosted.org/packages/b1/13/6fbcb55fef0b34c70cb3753741eaafc0e91553a1318653587a7d145caf15/xlrd-0.9.3.tar.gz (178kB) build 14-Oct-2019 14:28:46 Installing collected packages: openpyxl, pika, pymongo, pytz, requests, xlrd build 14-Oct-2019 14:28:46 Running setup.py install for openpyxl: started build 14-Oct-2019 14:28:46 Running setup.py install for openpyxl: finished with status 'done' build 14-Oct-2019 14:28:46 Found existing installation: pika 0.11.0 build 14-Oct-2019 14:28:46 Uninstalling pika-0.11.0: build 14-Oct-2019 14:28:46 Successfully uninstalled pika-0.11.0 build 14-Oct-2019 14:28:46 Running setup.py install for pika: started build 14-Oct-2019 14:28:46 Running setup.py install for pika: finished with status 'done' build 14-Oct-2019 14:28:46 Running setup.py install for pymongo: started build 14-Oct-2019 14:28:47 Running setup.py install for pymongo: finished with status 'done' build 14-Oct-2019 14:28:47 Running setup.py install for pytz: started build 14-Oct-2019 14:28:47 Running setup.py install for pytz: finished with status 'done' build 14-Oct-2019 14:28:47 Found existing installation: requests 2.18.4 build 14-Oct-2019 14:28:47 Uninstalling requests-2.18.4: build 14-Oct-2019 14:28:47 Successfully uninstalled requests-2.18.4 build 14-Oct-2019 14:28:48 Running setup.py install for xlrd: started build 14-Oct-2019 14:28:48 Running setup.py install for xlrd: finished with status 'done' build 14-Oct-2019 14:28:48 Successfully installed openpyxl-1.6.2 pika-0.9.14 pymongo-3.2.1 pytz-2014.3 requests-2.2.1 xlrd-0.9.3 build 14-Oct-2019 14:28:51 Removing intermediate container 4d4ad1429dcf build 14-Oct-2019 14:28:51 ---> 6972ff6edb28 build 14-Oct-2019 14:28:51 Step 8/11 : USER clowder build 14-Oct-2019 14:28:52 ---> Running in 293d74242ab6 build 14-Oct-2019 14:28:54 Removing intermediate container 293d74242ab6 build 14-Oct-2019 14:28:54 ---> bc2a563d9b90 build 14-Oct-2019 14:28:54 Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/ build 14-Oct-2019 14:28:55 ---> f31c95493cc6 build 14-Oct-2019 14:28:55 Step 10/11 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 14-Oct-2019 14:28:56 ---> Running in 4bfa5c016349 build 14-Oct-2019 14:28:57 Removing intermediate container 4bfa5c016349 build 14-Oct-2019 14:28:57 ---> 98f3404a497e build 14-Oct-2019 14:28:57 Step 11/11 : CMD ["extractor"] build 14-Oct-2019 14:28:57 ---> Running in 0ce4d9151d6f build 14-Oct-2019 14:28:59 Removing intermediate container 0ce4d9151d6f build 14-Oct-2019 14:28:59 ---> 225067a2eac8 build 14-Oct-2019 14:28:59 Successfully built 225067a2eac8 build 14-Oct-2019 14:28:59 Successfully tagged 6425:latest build 14-Oct-2019 14:28:59 The push refers to repository [docker.io/clowder/extractors-msc-monitor] build 14-Oct-2019 14:28:59 b7914381c878: Preparing build 14-Oct-2019 14:28:59 c7de75edec02: Preparing build 14-Oct-2019 14:28:59 6fd2f0eb8134: Preparing build 14-Oct-2019 14:28:59 3f1c9693144a: Preparing build 14-Oct-2019 14:28:59 0cdb02ac1d86: Preparing build 14-Oct-2019 14:28:59 f2297bdfc824: Preparing build 14-Oct-2019 14:28:59 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:28:59 59669fcdd5eb: Preparing build 14-Oct-2019 14:28:59 7f7a065d245a: Preparing build 14-Oct-2019 14:28:59 f96e6b25195f: Preparing build 14-Oct-2019 14:28:59 c56153825175: Preparing build 14-Oct-2019 14:28:59 ae620432889d: Preparing build 14-Oct-2019 14:28:59 a2022691bf95: Preparing build 14-Oct-2019 14:28:59 f2297bdfc824: Waiting build 14-Oct-2019 14:28:59 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:28:59 59669fcdd5eb: Waiting build 14-Oct-2019 14:28:59 7f7a065d245a: Waiting build 14-Oct-2019 14:28:59 f96e6b25195f: Waiting build 14-Oct-2019 14:28:59 c56153825175: Waiting build 14-Oct-2019 14:28:59 ae620432889d: Waiting build 14-Oct-2019 14:28:59 a2022691bf95: Waiting build 14-Oct-2019 14:29:00 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:29:00 f2297bdfc824: Layer already exists build 14-Oct-2019 14:29:00 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:29:01 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:29:01 7f7a065d245a: Layer already exists build 14-Oct-2019 14:29:01 b7914381c878: Pushed build 14-Oct-2019 14:29:01 3f1c9693144a: Pushed build 14-Oct-2019 14:29:01 f96e6b25195f: Layer already exists build 14-Oct-2019 14:29:01 c56153825175: Layer already exists build 14-Oct-2019 14:29:02 ae620432889d: Layer already exists build 14-Oct-2019 14:29:02 a2022691bf95: Layer already exists build 14-Oct-2019 14:29:02 6fd2f0eb8134: Pushed build 14-Oct-2019 14:29:02 c7de75edec02: Pushed build 14-Oct-2019 14:29:05 browndog_v0.2.0: digest: sha256:acd635bb9a5d62551cb5fe548341b89be06bc0ff0597d8efbb5bfe64d5af4465 size: 3031 build 14-Oct-2019 14:29:06 The push refers to repository [docker.io/clowder/extractors-msc-monitor] build 14-Oct-2019 14:29:06 b7914381c878: Preparing build 14-Oct-2019 14:29:06 c7de75edec02: Preparing build 14-Oct-2019 14:29:06 6fd2f0eb8134: Preparing build 14-Oct-2019 14:29:06 3f1c9693144a: Preparing build 14-Oct-2019 14:29:06 0cdb02ac1d86: Preparing build 14-Oct-2019 14:29:06 f2297bdfc824: Preparing build 14-Oct-2019 14:29:06 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:29:06 59669fcdd5eb: Preparing build 14-Oct-2019 14:29:06 7f7a065d245a: Preparing build 14-Oct-2019 14:29:06 f96e6b25195f: Preparing build 14-Oct-2019 14:29:06 c56153825175: Preparing build 14-Oct-2019 14:29:06 ae620432889d: Preparing build 14-Oct-2019 14:29:06 a2022691bf95: Preparing build 14-Oct-2019 14:29:06 f2297bdfc824: Waiting build 14-Oct-2019 14:29:06 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:29:06 59669fcdd5eb: Waiting build 14-Oct-2019 14:29:06 7f7a065d245a: Waiting build 14-Oct-2019 14:29:06 f96e6b25195f: Waiting build 14-Oct-2019 14:29:06 c56153825175: Waiting build 14-Oct-2019 14:29:06 ae620432889d: Waiting build 14-Oct-2019 14:29:06 a2022691bf95: Waiting build 14-Oct-2019 14:29:06 3f1c9693144a: Layer already exists build 14-Oct-2019 14:29:06 6fd2f0eb8134: Layer already exists build 14-Oct-2019 14:29:06 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:29:06 c7de75edec02: Layer already exists build 14-Oct-2019 14:29:06 b7914381c878: Layer already exists build 14-Oct-2019 14:29:07 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:29:07 f2297bdfc824: Layer already exists build 14-Oct-2019 14:29:07 7f7a065d245a: Layer already exists build 14-Oct-2019 14:29:07 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:29:07 f96e6b25195f: Layer already exists build 14-Oct-2019 14:29:07 a2022691bf95: Layer already exists build 14-Oct-2019 14:29:07 ae620432889d: Layer already exists build 14-Oct-2019 14:29:07 c56153825175: Layer already exists build 14-Oct-2019 14:29:07 browndog_v0.3.0: digest: sha256:acd635bb9a5d62551cb5fe548341b89be06bc0ff0597d8efbb5bfe64d5af4465 size: 3031 build 14-Oct-2019 14:29:08 The push refers to repository [docker.io/clowder/extractors-msc-monitor] build 14-Oct-2019 14:29:08 b7914381c878: Preparing build 14-Oct-2019 14:29:08 c7de75edec02: Preparing build 14-Oct-2019 14:29:08 6fd2f0eb8134: Preparing build 14-Oct-2019 14:29:08 3f1c9693144a: Preparing build 14-Oct-2019 14:29:08 0cdb02ac1d86: Preparing build 14-Oct-2019 14:29:08 f2297bdfc824: Preparing build 14-Oct-2019 14:29:08 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:29:08 59669fcdd5eb: Preparing build 14-Oct-2019 14:29:08 7f7a065d245a: Preparing build 14-Oct-2019 14:29:08 f96e6b25195f: Preparing build 14-Oct-2019 14:29:08 c56153825175: Preparing build 14-Oct-2019 14:29:08 ae620432889d: Preparing build 14-Oct-2019 14:29:08 a2022691bf95: Preparing build 14-Oct-2019 14:29:08 7f7a065d245a: Waiting build 14-Oct-2019 14:29:08 f96e6b25195f: Waiting build 14-Oct-2019 14:29:08 c56153825175: Waiting build 14-Oct-2019 14:29:08 ae620432889d: Waiting build 14-Oct-2019 14:29:08 a2022691bf95: Waiting build 14-Oct-2019 14:29:08 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:29:08 59669fcdd5eb: Waiting build 14-Oct-2019 14:29:08 f2297bdfc824: Waiting build 14-Oct-2019 14:29:08 3f1c9693144a: Layer already exists build 14-Oct-2019 14:29:08 b7914381c878: Layer already exists build 14-Oct-2019 14:29:08 c7de75edec02: Layer already exists build 14-Oct-2019 14:29:08 6fd2f0eb8134: Layer already exists build 14-Oct-2019 14:29:08 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:29:08 f2297bdfc824: Layer already exists build 14-Oct-2019 14:29:08 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:29:08 f96e6b25195f: Layer already exists build 14-Oct-2019 14:29:09 ae620432889d: Layer already exists build 14-Oct-2019 14:29:09 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:29:09 a2022691bf95: Layer already exists build 14-Oct-2019 14:29:09 7f7a065d245a: Layer already exists build 14-Oct-2019 14:29:09 c56153825175: Layer already exists build 14-Oct-2019 14:29:09 latest: digest: sha256:acd635bb9a5d62551cb5fe548341b89be06bc0ff0597d8efbb5bfe64d5af4465 size: 3031 build 14-Oct-2019 14:29:10 Untagged: 6425:latest build 14-Oct-2019 14:29:10 Sending build context to Docker daemon 12.1MB build 14-Oct-2019 14:29:10 build 14-Oct-2019 14:29:10 Step 1/11 : FROM clowder/pyclowder:1 build 14-Oct-2019 14:29:10 ---> d1a9e970ed30 build 14-Oct-2019 14:29:10 Step 2/11 : MAINTAINER Yan Zhao build 14-Oct-2019 14:29:10 ---> Using cache build 14-Oct-2019 14:29:10 ---> 44d958d7f080 build 14-Oct-2019 14:29:10 Step 3/11 : ENV RABBITMQ_URI="" RABBITMQ_EXCHANGE="clowder" RABBITMQ_VHOST="%2F" RABBITMQ_QUEUE="ncsa.msc.PhenotypeExtractor" MONGO_URI="" DB_USERNAME="" DB_PASSWORD="" MAIN_SCRIPT="extractor-Phenotype.py" build 14-Oct-2019 14:29:10 ---> Running in 1465ff6c8cd4 build 14-Oct-2019 14:29:11 Removing intermediate container 1465ff6c8cd4 build 14-Oct-2019 14:29:11 ---> b1f5dbcf10c9 build 14-Oct-2019 14:29:11 Step 4/11 : USER root build 14-Oct-2019 14:29:12 ---> Running in ea0d958ba088 build 14-Oct-2019 14:29:14 Removing intermediate container ea0d958ba088 build 14-Oct-2019 14:29:14 ---> d2c3810e54fa build 14-Oct-2019 14:29:14 Step 5/11 : COPY requirements.txt /home/clowder/ build 14-Oct-2019 14:29:15 ---> 1aad791cedb0 build 14-Oct-2019 14:29:15 Step 6/11 : RUN pip install --upgrade pip build 14-Oct-2019 14:29:15 ---> Running in 3011864a455e build 14-Oct-2019 14:29:18 Collecting pip build 14-Oct-2019 14:29:18 Downloading https://files.pythonhosted.org/packages/4a/08/6ca123073af4ebc4c5488a5bc8a010ac57aa39ce4d3c8a931ad504de4185/pip-19.3-py2.py3-none-any.whl (1.4MB) build 14-Oct-2019 14:29:18 Installing collected packages: pip build 14-Oct-2019 14:29:18 Found existing installation: pip 8.1.1 build 14-Oct-2019 14:29:18 Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr build 14-Oct-2019 14:29:19 Successfully installed pip-19.3 build 14-Oct-2019 14:29:22 Removing intermediate container 3011864a455e build 14-Oct-2019 14:29:22 ---> 88f1a5cc4c09 build 14-Oct-2019 14:29:22 Step 7/11 : RUN pip install -r /home/clowder/requirements.txt build 14-Oct-2019 14:29:23 ---> Running in 13be68fefa8c build 14-Oct-2019 14:29:25 DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support build 14-Oct-2019 14:29:25 Requirement already satisfied: argparse==1.2.1 in /usr/lib/python2.7 (from -r /home/clowder/requirements.txt (line 1)) (1.2.1) build 14-Oct-2019 14:29:25 Collecting openpyxl==1.6.2 build 14-Oct-2019 14:29:25 Downloading https://files.pythonhosted.org/packages/96/53/3782b6cc03500c0949a7ba9dba0c70da95d63d0ed4a04446123987ff983f/openpyxl-1.6.2.tar.gz (199kB) build 14-Oct-2019 14:29:26 Collecting pika==0.9.14 build 14-Oct-2019 14:29:26 Downloading https://files.pythonhosted.org/packages/2b/5b/4c5b6eafc63e0985b926267579a1e2534af70df0a45932f0c23fcc5f1b88/pika-0.9.14.tar.gz (72kB) build 14-Oct-2019 14:29:27 Collecting pymongo==3.2.1 build 14-Oct-2019 14:29:27 Downloading https://files.pythonhosted.org/packages/d7/94/9aa9ddd3e885caa307c0db8af5a1f5d266d3db44e1ae89bd4e14841ab8d0/pymongo-3.2.1.tar.gz (647kB) build 14-Oct-2019 14:29:28 Collecting pytz==2014.3 build 14-Oct-2019 14:29:28 Downloading https://files.pythonhosted.org/packages/e2/8d/af599c0388f46775c6b039d8b9c4acda2f6ef86787312a35291fff4cb7ca/pytz-2014.3.tar.bz2 (158kB) build 14-Oct-2019 14:29:29 Collecting requests==2.2.1 build 14-Oct-2019 14:29:29 Downloading https://files.pythonhosted.org/packages/7d/15/6efffc6aee666e1456852c2bf1d483b46bf971a2d509b35a98fc3eae1c60/requests-2.2.1-py2.py3-none-any.whl (625kB) build 14-Oct-2019 14:29:29 Requirement already satisfied: wsgiref==0.1.2 in /usr/lib/python2.7 (from -r /home/clowder/requirements.txt (line 7)) (0.1.2) build 14-Oct-2019 14:29:29 Collecting xlrd==0.9.3 build 14-Oct-2019 14:29:29 Downloading https://files.pythonhosted.org/packages/b1/13/6fbcb55fef0b34c70cb3753741eaafc0e91553a1318653587a7d145caf15/xlrd-0.9.3.tar.gz (178kB) build 14-Oct-2019 14:29:30 Installing collected packages: openpyxl, pika, pymongo, pytz, requests, xlrd build 14-Oct-2019 14:29:30 Running setup.py install for openpyxl: started build 14-Oct-2019 14:29:30 Running setup.py install for openpyxl: finished with status 'done' build 14-Oct-2019 14:29:30 Found existing installation: pika 0.11.0 build 14-Oct-2019 14:29:30 Uninstalling pika-0.11.0: build 14-Oct-2019 14:29:30 Successfully uninstalled pika-0.11.0 build 14-Oct-2019 14:29:30 Running setup.py install for pika: started build 14-Oct-2019 14:29:30 Running setup.py install for pika: finished with status 'done' build 14-Oct-2019 14:29:30 Running setup.py install for pymongo: started build 14-Oct-2019 14:29:31 Running setup.py install for pymongo: finished with status 'done' build 14-Oct-2019 14:29:31 Running setup.py install for pytz: started build 14-Oct-2019 14:29:31 Running setup.py install for pytz: finished with status 'done' build 14-Oct-2019 14:29:31 Found existing installation: requests 2.18.4 build 14-Oct-2019 14:29:31 Uninstalling requests-2.18.4: build 14-Oct-2019 14:29:31 Successfully uninstalled requests-2.18.4 build 14-Oct-2019 14:29:32 Running setup.py install for xlrd: started build 14-Oct-2019 14:29:32 Running setup.py install for xlrd: finished with status 'done' build 14-Oct-2019 14:29:32 Successfully installed openpyxl-1.6.2 pika-0.9.14 pymongo-3.2.1 pytz-2014.3 requests-2.2.1 xlrd-0.9.3 build 14-Oct-2019 14:29:35 Removing intermediate container 13be68fefa8c build 14-Oct-2019 14:29:35 ---> ec2407caf365 build 14-Oct-2019 14:29:35 Step 8/11 : USER clowder build 14-Oct-2019 14:29:36 ---> Running in 907920385fe0 build 14-Oct-2019 14:29:37 Removing intermediate container 907920385fe0 build 14-Oct-2019 14:29:37 ---> 12244cfa6cb5 build 14-Oct-2019 14:29:37 Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/ build 14-Oct-2019 14:29:39 ---> 151317816a09 build 14-Oct-2019 14:29:39 Step 10/11 : ENTRYPOINT ["/home/clowder/entrypoint.sh"] build 14-Oct-2019 14:29:39 ---> Running in 638cb9214f38 build 14-Oct-2019 14:29:40 Removing intermediate container 638cb9214f38 build 14-Oct-2019 14:29:40 ---> 40521f19762c build 14-Oct-2019 14:29:40 Step 11/11 : CMD ["extractor"] build 14-Oct-2019 14:29:41 ---> Running in a9c658ff67d3 build 14-Oct-2019 14:29:42 Removing intermediate container a9c658ff67d3 build 14-Oct-2019 14:29:42 ---> 329f15fafab8 build 14-Oct-2019 14:29:42 Successfully built 329f15fafab8 build 14-Oct-2019 14:29:42 Successfully tagged 6425:latest build 14-Oct-2019 14:29:43 The push refers to repository [docker.io/clowder/extractors-msc-phenotype] build 14-Oct-2019 14:29:43 de094b1bae13: Preparing build 14-Oct-2019 14:29:43 434168afd868: Preparing build 14-Oct-2019 14:29:43 5832517e6c3b: Preparing build 14-Oct-2019 14:29:43 98bb6360708c: Preparing build 14-Oct-2019 14:29:43 0cdb02ac1d86: Preparing build 14-Oct-2019 14:29:43 f2297bdfc824: Preparing build 14-Oct-2019 14:29:43 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:29:43 59669fcdd5eb: Preparing build 14-Oct-2019 14:29:43 7f7a065d245a: Preparing build 14-Oct-2019 14:29:43 f96e6b25195f: Preparing build 14-Oct-2019 14:29:43 c56153825175: Preparing build 14-Oct-2019 14:29:43 ae620432889d: Preparing build 14-Oct-2019 14:29:43 a2022691bf95: Preparing build 14-Oct-2019 14:29:43 f2297bdfc824: Waiting build 14-Oct-2019 14:29:43 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:29:43 59669fcdd5eb: Waiting build 14-Oct-2019 14:29:43 7f7a065d245a: Waiting build 14-Oct-2019 14:29:43 f96e6b25195f: Waiting build 14-Oct-2019 14:29:43 c56153825175: Waiting build 14-Oct-2019 14:29:43 ae620432889d: Waiting build 14-Oct-2019 14:29:43 a2022691bf95: Waiting build 14-Oct-2019 14:29:43 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:29:43 f2297bdfc824: Layer already exists build 14-Oct-2019 14:29:44 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:29:44 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:29:44 7f7a065d245a: Layer already exists build 14-Oct-2019 14:29:45 f96e6b25195f: Layer already exists build 14-Oct-2019 14:29:45 de094b1bae13: Pushed build 14-Oct-2019 14:29:45 c56153825175: Layer already exists build 14-Oct-2019 14:29:45 ae620432889d: Layer already exists build 14-Oct-2019 14:29:45 98bb6360708c: Pushed build 14-Oct-2019 14:29:45 a2022691bf95: Layer already exists build 14-Oct-2019 14:29:46 5832517e6c3b: Pushed build 14-Oct-2019 14:29:46 434168afd868: Pushed build 14-Oct-2019 14:29:48 browndog_v0.2.0: digest: sha256:e2e4db03dbe34e01d05a7fa46743812a9aecf13790ef64676eaf32e5dee9df77 size: 3031 build 14-Oct-2019 14:29:49 The push refers to repository [docker.io/clowder/extractors-msc-phenotype] build 14-Oct-2019 14:29:49 de094b1bae13: Preparing build 14-Oct-2019 14:29:49 434168afd868: Preparing build 14-Oct-2019 14:29:49 5832517e6c3b: Preparing build 14-Oct-2019 14:29:49 98bb6360708c: Preparing build 14-Oct-2019 14:29:49 0cdb02ac1d86: Preparing build 14-Oct-2019 14:29:49 f2297bdfc824: Preparing build 14-Oct-2019 14:29:49 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:29:49 59669fcdd5eb: Preparing build 14-Oct-2019 14:29:49 7f7a065d245a: Preparing build 14-Oct-2019 14:29:49 f96e6b25195f: Preparing build 14-Oct-2019 14:29:49 c56153825175: Preparing build 14-Oct-2019 14:29:49 ae620432889d: Preparing build 14-Oct-2019 14:29:49 a2022691bf95: Preparing build 14-Oct-2019 14:29:49 f2297bdfc824: Waiting build 14-Oct-2019 14:29:49 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:29:49 59669fcdd5eb: Waiting build 14-Oct-2019 14:29:49 7f7a065d245a: Waiting build 14-Oct-2019 14:29:49 f96e6b25195f: Waiting build 14-Oct-2019 14:29:49 c56153825175: Waiting build 14-Oct-2019 14:29:49 ae620432889d: Waiting build 14-Oct-2019 14:29:49 a2022691bf95: Waiting build 14-Oct-2019 14:29:50 de094b1bae13: Layer already exists build 14-Oct-2019 14:29:50 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:29:50 5832517e6c3b: Layer already exists build 14-Oct-2019 14:29:50 434168afd868: Layer already exists build 14-Oct-2019 14:29:50 98bb6360708c: Layer already exists build 14-Oct-2019 14:29:50 f2297bdfc824: Layer already exists build 14-Oct-2019 14:29:50 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:29:50 7f7a065d245a: Layer already exists build 14-Oct-2019 14:29:50 f96e6b25195f: Layer already exists build 14-Oct-2019 14:29:50 a2022691bf95: Layer already exists build 14-Oct-2019 14:29:50 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:29:50 ae620432889d: Layer already exists build 14-Oct-2019 14:29:50 c56153825175: Layer already exists build 14-Oct-2019 14:29:51 browndog_v0.3.0: digest: sha256:e2e4db03dbe34e01d05a7fa46743812a9aecf13790ef64676eaf32e5dee9df77 size: 3031 build 14-Oct-2019 14:29:51 The push refers to repository [docker.io/clowder/extractors-msc-phenotype] build 14-Oct-2019 14:29:51 de094b1bae13: Preparing build 14-Oct-2019 14:29:51 434168afd868: Preparing build 14-Oct-2019 14:29:51 5832517e6c3b: Preparing build 14-Oct-2019 14:29:51 98bb6360708c: Preparing build 14-Oct-2019 14:29:51 0cdb02ac1d86: Preparing build 14-Oct-2019 14:29:51 f2297bdfc824: Preparing build 14-Oct-2019 14:29:51 0fbe2bcb1bf9: Preparing build 14-Oct-2019 14:29:51 59669fcdd5eb: Preparing build 14-Oct-2019 14:29:51 7f7a065d245a: Preparing build 14-Oct-2019 14:29:51 f96e6b25195f: Preparing build 14-Oct-2019 14:29:51 c56153825175: Preparing build 14-Oct-2019 14:29:51 ae620432889d: Preparing build 14-Oct-2019 14:29:51 a2022691bf95: Preparing build 14-Oct-2019 14:29:51 7f7a065d245a: Waiting build 14-Oct-2019 14:29:51 f96e6b25195f: Waiting build 14-Oct-2019 14:29:51 c56153825175: Waiting build 14-Oct-2019 14:29:51 ae620432889d: Waiting build 14-Oct-2019 14:29:51 a2022691bf95: Waiting build 14-Oct-2019 14:29:51 f2297bdfc824: Waiting build 14-Oct-2019 14:29:51 0fbe2bcb1bf9: Waiting build 14-Oct-2019 14:29:51 59669fcdd5eb: Waiting build 14-Oct-2019 14:29:51 5832517e6c3b: Layer already exists build 14-Oct-2019 14:29:51 98bb6360708c: Layer already exists build 14-Oct-2019 14:29:51 434168afd868: Layer already exists build 14-Oct-2019 14:29:51 0cdb02ac1d86: Layer already exists build 14-Oct-2019 14:29:52 de094b1bae13: Layer already exists build 14-Oct-2019 14:29:52 0fbe2bcb1bf9: Layer already exists build 14-Oct-2019 14:29:52 7f7a065d245a: Layer already exists build 14-Oct-2019 14:29:52 59669fcdd5eb: Layer already exists build 14-Oct-2019 14:29:52 f96e6b25195f: Layer already exists build 14-Oct-2019 14:29:52 c56153825175: Layer already exists build 14-Oct-2019 14:29:52 ae620432889d: Layer already exists build 14-Oct-2019 14:29:52 a2022691bf95: Layer already exists build 14-Oct-2019 14:29:53 f2297bdfc824: Layer already exists build 14-Oct-2019 14:29:54 latest: digest: sha256:e2e4db03dbe34e01d05a7fa46743812a9aecf13790ef64676eaf32e5dee9df77 size: 3031 build 14-Oct-2019 14:29:54 Untagged: 6425:latest simple 14-Oct-2019 14:29:54 Finished task 'docker build' with result: Success simple 14-Oct-2019 14:29:54 Running post build plugin 'Docker Container Cleanup' simple 14-Oct-2019 14:29:54 Running post build plugin 'NCover Results Collector' simple 14-Oct-2019 14:29:54 Running post build plugin 'Clover Results Collector' simple 14-Oct-2019 14:29:54 Running post build plugin 'npm Cache Cleanup' simple 14-Oct-2019 14:29:54 Running post build plugin 'Artifact Copier' simple 14-Oct-2019 14:29:54 Finalising the build... simple 14-Oct-2019 14:29:54 Stopping timer. simple 14-Oct-2019 14:29:54 Build CATS-MSC-JOB1-42 completed. simple 14-Oct-2019 14:29:54 Running on server: post build plugin 'NCover Results Collector' simple 14-Oct-2019 14:29:54 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 14-Oct-2019 14:29:54 Running on server: post build plugin 'Clover Delta Calculator' simple 14-Oct-2019 14:29:54 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 14-Oct-2019 14:29:54 All post build plugins have finished simple 14-Oct-2019 14:29:54 Generating build results summary... simple 14-Oct-2019 14:29:54 Saving build results to disk... simple 14-Oct-2019 14:29:54 Logging substituted variables... simple 14-Oct-2019 14:29:54 Indexing build results... simple 14-Oct-2019 14:29:54 Finished building CATS-MSC-JOB1-42.