simple 29-Sep-2016 16:46:33 Build Clowder - extractors-msc - master - Default Job #1 (CATS-MSC1-JOB1-1) started building on agent buildserver-2.ncsa.illinois.edu simple 29-Sep-2016 16:46:33 Remote Agent simple 29-Sep-2016 16:46:33 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1 simple 29-Sep-2016 16:46:33 Executing build Clowder - extractors-msc - master - Default Job #1 (CATS-MSC1-JOB1-1) simple 29-Sep-2016 16:46:33 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 29-Sep-2016 16:46:33 Updating source code to revision: fcb4e1a54dea0bccc7c1e15742a71aeb43a25c5c simple 29-Sep-2016 16:46:33 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1/.git'. simple 29-Sep-2016 16:46:33 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1/.git/ simple 29-Sep-2016 16:46:33 Fetching 'refs/heads/master' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git'. Will try to do a shallow fetch. simple 29-Sep-2016 16:46:33 Warning: Permanently added '[127.0.0.1]:54704' (RSA) to the list of known hosts. simple 29-Sep-2016 16:46:35 From ssh://127.0.0.1:54704/cats/extractors-msc simple 29-Sep-2016 16:46:35 * [new branch] master -> master simple 29-Sep-2016 16:46:35 Checking out revision fcb4e1a54dea0bccc7c1e15742a71aeb43a25c5c. simple 29-Sep-2016 16:46:36 Already on 'master' simple 29-Sep-2016 16:46:36 Updated source code to revision: fcb4e1a54dea0bccc7c1e15742a71aeb43a25c5c simple 29-Sep-2016 16:46:36 Finished task 'Checkout Default Repository' with result: Success simple 29-Sep-2016 16:46:36 Running pre-build action: VCS Version Collector simple 29-Sep-2016 16:46:36 Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 29-Sep-2016 16:46:36 Beginning to execute external process for build 'Clowder - extractors-msc - master - Default Job #1 (CATS-MSC1-JOB1-1)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=master\nbamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster\nbamboo_repository_revision_number=fcb4e1a54dea0bccc7c1e15742a71aeb43a25c5c\nbamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-MSC1-JOB1-1\nbamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build\nbamboo_planRepository_1_name=extractors-msc\nbamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1\nbamboo_buildKey=CATS-MSC1-JOB1\nbamboo_capability_system_os=linux\nbamboo_shortPlanName=master\nbamboo_repository_127172629_branch_name=master\nbamboo_planRepository_name=extractors-msc\nbamboo_buildNumber=1\nbamboo_repository_127172629_git_username=\nbamboo_shortJobName=Default Job\nbamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-MSC1-JOB1-1\nbamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_agentId=106758145\nbamboo_planName=Clowder - extractors-msc - master\nbamboo_shortPlanKey=MSC1\nbamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt\nbamboo_repository_127172629_git_branch=master\nbamboo_shortJobKey=JOB1\nbamboo_repository_127172629_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_repository_127172629_name=extractors-msc\nbamboo_planRepository_revision=fcb4e1a54dea0bccc7c1e15742a71aeb43a25c5c\nbamboo_buildTimeStamp=2016-09-29T16:46:33.070-05:00\nbamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm\nbamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1\nbamboo_buildResultKey=CATS-MSC1-JOB1-1\nbamboo_repository_git_branch=master\nbamboo_repository_branch_name=master\nbamboo_buildPlanName=Clowder - extractors-msc - master - Default Job\nbamboo_planRepository_1_revision=fcb4e1a54dea0bccc7c1e15742a71aeb43a25c5c\nbamboo_repository_name=extractors-msc\nbamboo_dependenciesDisabled=false\nbamboo_capability_system_docker_executable=/usr/bin/docker\nbamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt\nbamboo_planRepository_branch=master\nbamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/usr/bin/git\nbamboo_repository_git_username=\nbamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs\nbamboo_planRepository_1_type=stash-rep\nbamboo_planRepository_branchName=master\nbamboo_capability_system_hostname=buildserver-2\nbamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_software_mongo=/usr/bin/mongo\nbamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl\nbamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs\nbamboo_planRepository_type=stash-rep\nbamboo_planRepository_1_username=\nbamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66\nbamboo_ManualBuildTriggerReason_userName=kooper\nbamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node\nbamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4\nbamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9\nbamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1\nbamboo_planKey=CATS-MSC1\nbamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git\nbamboo_planRepository_username=\nbamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41\nbamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60\nbamboo_planRepository_1_branchName=master\nbamboo_repository_127172629_revision_number=fcb4e1a54dea0bccc7c1e15742a71aeb43a25c5c\n build 29-Sep-2016 16:46:36 Sending build context to Docker daemon 557.1 kB build 29-Sep-2016 16:46:36 Sending build context to Docker daemon 1.114 MB build 29-Sep-2016 16:46:36 Sending build context to Docker daemon 1.671 MB build 29-Sep-2016 16:46:36 Sending build context to Docker daemon 2.228 MB build 29-Sep-2016 16:46:36 Sending build context to Docker daemon 2.284 MB build 29-Sep-2016 16:46:36 build 29-Sep-2016 16:46:36 Step 1 : FROM ncsa/clowder-extractors-python-base build 29-Sep-2016 16:46:36 ---> 8d903bf8cadc build 29-Sep-2016 16:46:36 Step 2 : MAINTAINER Rob Kooper build 29-Sep-2016 16:46:36 ---> Using cache build 29-Sep-2016 16:46:36 ---> 363fbaa419c5 build 29-Sep-2016 16:46:36 Step 3 : VOLUME /matlab build 29-Sep-2016 16:46:36 ---> Using cache build 29-Sep-2016 16:46:36 ---> 8a22c43e7bf0 build 29-Sep-2016 16:46:36 Step 4 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.diagnosis" MATLAB_BINARY "/matlab/bin/matlab" MAIN_SCRIPT "diagnosis.py" build 29-Sep-2016 16:46:36 ---> Using cache build 29-Sep-2016 16:46:36 ---> 0440291779a5 build 29-Sep-2016 16:46:36 Step 5 : USER root build 29-Sep-2016 16:46:36 ---> Using cache build 29-Sep-2016 16:46:36 ---> dbebbca3d754 build 29-Sep-2016 16:46:36 Step 6 : RUN pip install --upgrade pip build 29-Sep-2016 16:46:36 ---> Using cache build 29-Sep-2016 16:46:36 ---> c939d510f130 build 29-Sep-2016 16:46:36 Step 7 : RUN apt-get -qq -y update && apt-get -y install libxext6 libxmu6 libxt6 wget && mkdir -p /matlab && rm -rf /var/lib/apt/lists/* build 29-Sep-2016 16:46:36 ---> Using cache build 29-Sep-2016 16:46:36 ---> a0e94eedbbe5 build 29-Sep-2016 16:46:36 Step 8 : USER clowder build 29-Sep-2016 16:46:36 ---> Using cache build 29-Sep-2016 16:46:36 ---> 1438e8c1be53 build 29-Sep-2016 16:46:36 Step 9 : COPY entrypoint.sh *.py *.m data/*.mat *.json /home/clowder/ build 29-Sep-2016 16:46:36 ---> Using cache build 29-Sep-2016 16:46:36 ---> 572e27e86f63 build 29-Sep-2016 16:46:36 Step 10 : ENTRYPOINT /home/clowder/entrypoint.sh build 29-Sep-2016 16:46:36 ---> Using cache build 29-Sep-2016 16:46:36 ---> a76c1d2feea1 build 29-Sep-2016 16:46:36 Step 11 : CMD extractor build 29-Sep-2016 16:46:36 ---> Using cache build 29-Sep-2016 16:46:36 ---> 1ee04c9018ca build 29-Sep-2016 16:46:36 Successfully built 1ee04c9018ca build 29-Sep-2016 16:46:41 The push refers to a repository [docker.io/ncsa/clowder-extractors-msc-kidney] build 29-Sep-2016 16:46:42 dd29c73f430c: Preparing build 29-Sep-2016 16:46:42 726bfe5cebb6: Preparing build 29-Sep-2016 16:46:42 59ae3c638098: Preparing build 29-Sep-2016 16:46:42 862e415b9119: Preparing build 29-Sep-2016 16:46:42 db585c947dc1: Preparing build 29-Sep-2016 16:46:42 dc65cb899fbc: Preparing build 29-Sep-2016 16:46:42 e458e997a991: Preparing build 29-Sep-2016 16:46:42 eb33f051084b: Preparing build 29-Sep-2016 16:46:42 3e907de58acd: Preparing build 29-Sep-2016 16:46:42 b04095771c04: Preparing build 29-Sep-2016 16:46:42 3d865816fc94: Preparing build 29-Sep-2016 16:46:42 dc65cb899fbc: Waiting build 29-Sep-2016 16:46:42 e458e997a991: Waiting build 29-Sep-2016 16:46:42 eb33f051084b: Waiting build 29-Sep-2016 16:46:42 3e907de58acd: Waiting build 29-Sep-2016 16:46:42 b04095771c04: Waiting build 29-Sep-2016 16:46:42 3d865816fc94: Waiting build 29-Sep-2016 16:46:43 db585c947dc1: Mounted from clowder/extractors-vlfeat build 29-Sep-2016 16:46:43 dc65cb899fbc: Mounted from clowder/extractors-vlfeat build 29-Sep-2016 16:46:44 862e415b9119: Mounted from clowder/extractors-vlfeat build 29-Sep-2016 16:46:44 eb33f051084b: Mounted from clowder/extractors-vlfeat build 29-Sep-2016 16:46:45 e458e997a991: Mounted from clowder/extractors-vlfeat build 29-Sep-2016 16:46:45 3e907de58acd: Mounted from clowder/extractors-vlfeat build 29-Sep-2016 16:46:45 dd29c73f430c: Pushed build 29-Sep-2016 16:46:45 b04095771c04: Mounted from clowder/extractors-vlfeat build 29-Sep-2016 16:46:45 726bfe5cebb6: Pushed build 29-Sep-2016 16:46:46 3d865816fc94: Mounted from clowder/extractors-vlfeat build 29-Sep-2016 16:46:47 59ae3c638098: Pushed build 29-Sep-2016 16:46:49 master: digest: sha256:cb3c1755e1f87c906723c8da30fabf8c88a2350c93d4a3231f5498cca764ba08 size: 2620 build 29-Sep-2016 16:46:50 The push refers to a repository [docker.io/clowder/extractors-msc-kidney] build 29-Sep-2016 16:46:50 dd29c73f430c: Preparing build 29-Sep-2016 16:46:50 726bfe5cebb6: Preparing build 29-Sep-2016 16:46:50 59ae3c638098: Preparing build 29-Sep-2016 16:46:50 862e415b9119: Preparing build 29-Sep-2016 16:46:50 db585c947dc1: Preparing build 29-Sep-2016 16:46:50 dc65cb899fbc: Preparing build 29-Sep-2016 16:46:50 e458e997a991: Preparing build 29-Sep-2016 16:46:50 eb33f051084b: Preparing build 29-Sep-2016 16:46:50 3e907de58acd: Preparing build 29-Sep-2016 16:46:50 b04095771c04: Preparing build 29-Sep-2016 16:46:50 3d865816fc94: Preparing build 29-Sep-2016 16:46:50 e458e997a991: Waiting build 29-Sep-2016 16:46:50 eb33f051084b: Waiting build 29-Sep-2016 16:46:50 3e907de58acd: Waiting build 29-Sep-2016 16:46:50 b04095771c04: Waiting build 29-Sep-2016 16:46:50 3d865816fc94: Waiting build 29-Sep-2016 16:46:50 dc65cb899fbc: Waiting build 29-Sep-2016 16:46:51 59ae3c638098: Mounted from ncsa/clowder-extractors-msc-kidney build 29-Sep-2016 16:46:51 db585c947dc1: Mounted from ncsa/clowder-extractors-msc-kidney build 29-Sep-2016 16:46:51 726bfe5cebb6: Mounted from ncsa/clowder-extractors-msc-kidney build 29-Sep-2016 16:46:51 862e415b9119: Mounted from ncsa/clowder-extractors-msc-kidney build 29-Sep-2016 16:46:51 dd29c73f430c: Mounted from ncsa/clowder-extractors-msc-kidney build 29-Sep-2016 16:46:52 eb33f051084b: Mounted from ncsa/clowder-extractors-msc-kidney build 29-Sep-2016 16:46:52 dc65cb899fbc: Mounted from ncsa/clowder-extractors-msc-kidney build 29-Sep-2016 16:46:52 e458e997a991: Mounted from ncsa/clowder-extractors-msc-kidney build 29-Sep-2016 16:46:52 3e907de58acd: Mounted from ncsa/clowder-extractors-msc-kidney build 29-Sep-2016 16:46:52 3d865816fc94: Mounted from ncsa/clowder-extractors-msc-kidney build 29-Sep-2016 16:46:52 b04095771c04: Mounted from ncsa/clowder-extractors-msc-kidney build 29-Sep-2016 16:46:54 master: digest: sha256:cb3c1755e1f87c906723c8da30fabf8c88a2350c93d4a3231f5498cca764ba08 size: 2620 build 29-Sep-2016 16:46:54 The push refers to a repository [docker.io/ncsa/clowder-extractors-msc-kidney] build 29-Sep-2016 16:46:54 dd29c73f430c: Preparing build 29-Sep-2016 16:46:54 726bfe5cebb6: Preparing build 29-Sep-2016 16:46:54 59ae3c638098: Preparing build 29-Sep-2016 16:46:54 862e415b9119: Preparing build 29-Sep-2016 16:46:54 db585c947dc1: Preparing build 29-Sep-2016 16:46:54 dc65cb899fbc: Preparing build 29-Sep-2016 16:46:54 e458e997a991: Preparing build 29-Sep-2016 16:46:54 eb33f051084b: Preparing build 29-Sep-2016 16:46:54 3e907de58acd: Preparing build 29-Sep-2016 16:46:54 b04095771c04: Preparing build 29-Sep-2016 16:46:54 e458e997a991: Waiting build 29-Sep-2016 16:46:54 eb33f051084b: Waiting build 29-Sep-2016 16:46:54 dc65cb899fbc: Waiting build 29-Sep-2016 16:46:54 3e907de58acd: Waiting build 29-Sep-2016 16:46:54 3d865816fc94: Preparing build 29-Sep-2016 16:46:54 b04095771c04: Waiting build 29-Sep-2016 16:46:54 3d865816fc94: Waiting build 29-Sep-2016 16:46:55 862e415b9119: Layer already exists build 29-Sep-2016 16:46:55 db585c947dc1: Layer already exists build 29-Sep-2016 16:46:55 59ae3c638098: Layer already exists build 29-Sep-2016 16:46:55 dd29c73f430c: Layer already exists build 29-Sep-2016 16:46:55 726bfe5cebb6: Layer already exists build 29-Sep-2016 16:46:55 dc65cb899fbc: Layer already exists build 29-Sep-2016 16:46:55 e458e997a991: Layer already exists build 29-Sep-2016 16:46:55 eb33f051084b: Layer already exists build 29-Sep-2016 16:46:55 3e907de58acd: Layer already exists build 29-Sep-2016 16:46:55 b04095771c04: Layer already exists build 29-Sep-2016 16:46:55 3d865816fc94: Layer already exists build 29-Sep-2016 16:46:55 latest: digest: sha256:cb3c1755e1f87c906723c8da30fabf8c88a2350c93d4a3231f5498cca764ba08 size: 2620 build 29-Sep-2016 16:46:56 The push refers to a repository [docker.io/clowder/extractors-msc-kidney] build 29-Sep-2016 16:46:56 dd29c73f430c: Preparing build 29-Sep-2016 16:46:56 726bfe5cebb6: Preparing build 29-Sep-2016 16:46:56 59ae3c638098: Preparing build 29-Sep-2016 16:46:56 862e415b9119: Preparing build 29-Sep-2016 16:46:56 db585c947dc1: Preparing build 29-Sep-2016 16:46:56 dc65cb899fbc: Preparing build 29-Sep-2016 16:46:56 e458e997a991: Preparing build 29-Sep-2016 16:46:56 eb33f051084b: Preparing build 29-Sep-2016 16:46:56 3e907de58acd: Preparing build 29-Sep-2016 16:46:56 b04095771c04: Preparing build 29-Sep-2016 16:46:56 3d865816fc94: Preparing build 29-Sep-2016 16:46:56 dc65cb899fbc: Waiting build 29-Sep-2016 16:46:56 e458e997a991: Waiting build 29-Sep-2016 16:46:56 eb33f051084b: Waiting build 29-Sep-2016 16:46:56 3e907de58acd: Waiting build 29-Sep-2016 16:46:56 b04095771c04: Waiting build 29-Sep-2016 16:46:56 3d865816fc94: Waiting build 29-Sep-2016 16:46:56 59ae3c638098: Layer already exists build 29-Sep-2016 16:46:56 862e415b9119: Layer already exists build 29-Sep-2016 16:46:56 726bfe5cebb6: Layer already exists build 29-Sep-2016 16:46:56 db585c947dc1: Layer already exists build 29-Sep-2016 16:46:56 dd29c73f430c: Layer already exists build 29-Sep-2016 16:46:56 dc65cb899fbc: Layer already exists build 29-Sep-2016 16:46:56 eb33f051084b: Layer already exists build 29-Sep-2016 16:46:56 e458e997a991: Layer already exists build 29-Sep-2016 16:46:56 3e907de58acd: Layer already exists build 29-Sep-2016 16:46:56 b04095771c04: Layer already exists build 29-Sep-2016 16:46:57 3d865816fc94: Layer already exists build 29-Sep-2016 16:46:57 latest: digest: sha256:cb3c1755e1f87c906723c8da30fabf8c88a2350c93d4a3231f5498cca764ba08 size: 2620 build 29-Sep-2016 16:46:57 Untagged: 4716:latest build 29-Sep-2016 16:46:57 Sending build context to Docker daemon 67.07 kB build 29-Sep-2016 16:46:57 build 29-Sep-2016 16:46:57 Step 1 : FROM ncsa/clowder-extractors-python-base build 29-Sep-2016 16:46:57 ---> 8d903bf8cadc build 29-Sep-2016 16:46:57 Step 2 : MAINTAINER Yan Zhao build 29-Sep-2016 16:46:57 ---> Using cache build 29-Sep-2016 16:46:57 ---> d1ef7c140c15 build 29-Sep-2016 16:46:57 Step 3 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.IsletExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Islet.py" build 29-Sep-2016 16:46:57 ---> Using cache build 29-Sep-2016 16:46:57 ---> 0490357a5b3d build 29-Sep-2016 16:46:57 Step 4 : USER root build 29-Sep-2016 16:46:57 ---> Using cache build 29-Sep-2016 16:46:57 ---> 1d1ea704a325 build 29-Sep-2016 16:46:57 Step 5 : COPY requirements.txt /home/clowder/ build 29-Sep-2016 16:46:57 ---> Using cache build 29-Sep-2016 16:46:57 ---> c10d64deb071 build 29-Sep-2016 16:46:57 Step 6 : RUN pip install --upgrade pip build 29-Sep-2016 16:46:57 ---> Using cache build 29-Sep-2016 16:46:57 ---> e3dbb5fd0c33 build 29-Sep-2016 16:46:57 Step 7 : RUN pip install -r /home/clowder/requirements.txt build 29-Sep-2016 16:46:57 ---> Using cache build 29-Sep-2016 16:46:57 ---> f4a15bf92673 build 29-Sep-2016 16:46:57 Step 8 : USER clowder build 29-Sep-2016 16:46:57 ---> Using cache build 29-Sep-2016 16:46:57 ---> 739c608153d2 build 29-Sep-2016 16:46:57 Step 9 : COPY entrypoint.sh *.py *.json /home/clowder/ build 29-Sep-2016 16:46:57 ---> Using cache build 29-Sep-2016 16:46:57 ---> 51fd2f4fcad5 build 29-Sep-2016 16:46:57 Step 10 : ENTRYPOINT /home/clowder/entrypoint.sh build 29-Sep-2016 16:46:57 ---> Using cache build 29-Sep-2016 16:46:57 ---> 429994e7ea1f build 29-Sep-2016 16:46:57 Step 11 : CMD extractor build 29-Sep-2016 16:46:57 ---> Using cache build 29-Sep-2016 16:46:57 ---> b5bb3996f372 build 29-Sep-2016 16:46:57 Successfully built b5bb3996f372 build 29-Sep-2016 16:46:57 The push refers to a repository [docker.io/ncsa/clowder-extractors-msc-islet] build 29-Sep-2016 16:46:58 0193981a1f87: Preparing build 29-Sep-2016 16:46:58 124b4495c904: Preparing build 29-Sep-2016 16:46:58 610d2111cc7e: Preparing build 29-Sep-2016 16:46:58 7ef2865ddde9: Preparing build 29-Sep-2016 16:46:58 862e415b9119: Preparing build 29-Sep-2016 16:46:58 db585c947dc1: Preparing build 29-Sep-2016 16:46:58 dc65cb899fbc: Preparing build 29-Sep-2016 16:46:58 e458e997a991: Preparing build 29-Sep-2016 16:46:58 eb33f051084b: Preparing build 29-Sep-2016 16:46:58 3e907de58acd: Preparing build 29-Sep-2016 16:46:58 b04095771c04: Preparing build 29-Sep-2016 16:46:58 3d865816fc94: Preparing build 29-Sep-2016 16:46:58 db585c947dc1: Waiting build 29-Sep-2016 16:46:58 dc65cb899fbc: Waiting build 29-Sep-2016 16:46:58 3e907de58acd: Waiting build 29-Sep-2016 16:46:58 b04095771c04: Waiting build 29-Sep-2016 16:46:58 e458e997a991: Waiting build 29-Sep-2016 16:46:58 eb33f051084b: Waiting build 29-Sep-2016 16:46:58 3d865816fc94: Waiting build 29-Sep-2016 16:46:58 862e415b9119: Mounted from clowder/extractors-msc-kidney build 29-Sep-2016 16:46:59 db585c947dc1: Mounted from clowder/extractors-msc-kidney build 29-Sep-2016 16:46:59 dc65cb899fbc: Mounted from clowder/extractors-msc-kidney build 29-Sep-2016 16:47:00 e458e997a991: Mounted from clowder/extractors-msc-kidney build 29-Sep-2016 16:47:00 7ef2865ddde9: Pushed build 29-Sep-2016 16:47:00 eb33f051084b: Mounted from clowder/extractors-msc-kidney build 29-Sep-2016 16:47:01 3e907de58acd: Mounted from clowder/extractors-msc-kidney build 29-Sep-2016 16:47:01 b04095771c04: Mounted from clowder/extractors-msc-kidney build 29-Sep-2016 16:47:01 3d865816fc94: Mounted from clowder/extractors-msc-kidney build 29-Sep-2016 16:47:02 0193981a1f87: Pushed build 29-Sep-2016 16:47:02 124b4495c904: Pushed build 29-Sep-2016 16:47:03 610d2111cc7e: Pushed build 29-Sep-2016 16:47:05 master: digest: sha256:de4e1d748449b65e2dcce4d87756ec2a27867dadd665fe7219f2d2483c1b916f size: 2825 build 29-Sep-2016 16:47:05 The push refers to a repository [docker.io/clowder/extractors-msc-islet] build 29-Sep-2016 16:47:05 0193981a1f87: Preparing build 29-Sep-2016 16:47:05 124b4495c904: Preparing build 29-Sep-2016 16:47:05 610d2111cc7e: Preparing build 29-Sep-2016 16:47:05 7ef2865ddde9: Preparing build 29-Sep-2016 16:47:05 862e415b9119: Preparing build 29-Sep-2016 16:47:05 db585c947dc1: Preparing build 29-Sep-2016 16:47:05 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:05 e458e997a991: Preparing build 29-Sep-2016 16:47:05 eb33f051084b: Preparing build 29-Sep-2016 16:47:05 3e907de58acd: Preparing build 29-Sep-2016 16:47:05 b04095771c04: Preparing build 29-Sep-2016 16:47:05 3d865816fc94: Preparing build 29-Sep-2016 16:47:05 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:05 e458e997a991: Waiting build 29-Sep-2016 16:47:05 3e907de58acd: Waiting build 29-Sep-2016 16:47:05 eb33f051084b: Waiting build 29-Sep-2016 16:47:05 3d865816fc94: Waiting build 29-Sep-2016 16:47:05 b04095771c04: Waiting build 29-Sep-2016 16:47:05 db585c947dc1: Waiting build 29-Sep-2016 16:47:06 7ef2865ddde9: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:06 862e415b9119: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:06 610d2111cc7e: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:06 124b4495c904: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:06 0193981a1f87: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:07 e458e997a991: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:07 dc65cb899fbc: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:07 db585c947dc1: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:07 eb33f051084b: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:07 3e907de58acd: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:08 3d865816fc94: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:08 b04095771c04: Mounted from ncsa/clowder-extractors-msc-islet build 29-Sep-2016 16:47:10 master: digest: sha256:de4e1d748449b65e2dcce4d87756ec2a27867dadd665fe7219f2d2483c1b916f size: 2825 build 29-Sep-2016 16:47:11 The push refers to a repository [docker.io/ncsa/clowder-extractors-msc-islet] build 29-Sep-2016 16:47:11 0193981a1f87: Preparing build 29-Sep-2016 16:47:11 124b4495c904: Preparing build 29-Sep-2016 16:47:11 610d2111cc7e: Preparing build 29-Sep-2016 16:47:11 7ef2865ddde9: Preparing build 29-Sep-2016 16:47:11 862e415b9119: Preparing build 29-Sep-2016 16:47:11 db585c947dc1: Preparing build 29-Sep-2016 16:47:11 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:11 e458e997a991: Preparing build 29-Sep-2016 16:47:11 eb33f051084b: Preparing build 29-Sep-2016 16:47:11 3e907de58acd: Preparing build 29-Sep-2016 16:47:11 b04095771c04: Preparing build 29-Sep-2016 16:47:11 3d865816fc94: Preparing build 29-Sep-2016 16:47:11 e458e997a991: Waiting build 29-Sep-2016 16:47:11 eb33f051084b: Waiting build 29-Sep-2016 16:47:11 db585c947dc1: Waiting build 29-Sep-2016 16:47:11 3e907de58acd: Waiting build 29-Sep-2016 16:47:11 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:11 3d865816fc94: Waiting build 29-Sep-2016 16:47:11 b04095771c04: Waiting build 29-Sep-2016 16:47:11 0193981a1f87: Layer already exists build 29-Sep-2016 16:47:11 862e415b9119: Layer already exists build 29-Sep-2016 16:47:11 610d2111cc7e: Layer already exists build 29-Sep-2016 16:47:11 7ef2865ddde9: Layer already exists build 29-Sep-2016 16:47:11 124b4495c904: Layer already exists build 29-Sep-2016 16:47:11 db585c947dc1: Layer already exists build 29-Sep-2016 16:47:11 eb33f051084b: Layer already exists build 29-Sep-2016 16:47:11 3e907de58acd: Layer already exists build 29-Sep-2016 16:47:11 e458e997a991: Layer already exists build 29-Sep-2016 16:47:11 dc65cb899fbc: Layer already exists build 29-Sep-2016 16:47:11 b04095771c04: Layer already exists build 29-Sep-2016 16:47:11 3d865816fc94: Layer already exists build 29-Sep-2016 16:47:12 latest: digest: sha256:de4e1d748449b65e2dcce4d87756ec2a27867dadd665fe7219f2d2483c1b916f size: 2825 build 29-Sep-2016 16:47:12 The push refers to a repository [docker.io/clowder/extractors-msc-islet] build 29-Sep-2016 16:47:12 0193981a1f87: Preparing build 29-Sep-2016 16:47:12 124b4495c904: Preparing build 29-Sep-2016 16:47:12 610d2111cc7e: Preparing build 29-Sep-2016 16:47:12 7ef2865ddde9: Preparing build 29-Sep-2016 16:47:12 862e415b9119: Preparing build 29-Sep-2016 16:47:12 db585c947dc1: Preparing build 29-Sep-2016 16:47:12 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:12 e458e997a991: Preparing build 29-Sep-2016 16:47:12 eb33f051084b: Preparing build 29-Sep-2016 16:47:12 3e907de58acd: Preparing build 29-Sep-2016 16:47:12 b04095771c04: Preparing build 29-Sep-2016 16:47:12 3d865816fc94: Preparing build 29-Sep-2016 16:47:12 db585c947dc1: Waiting build 29-Sep-2016 16:47:12 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:12 eb33f051084b: Waiting build 29-Sep-2016 16:47:12 3e907de58acd: Waiting build 29-Sep-2016 16:47:12 b04095771c04: Waiting build 29-Sep-2016 16:47:12 3d865816fc94: Waiting build 29-Sep-2016 16:47:12 e458e997a991: Waiting build 29-Sep-2016 16:47:13 0193981a1f87: Layer already exists build 29-Sep-2016 16:47:13 862e415b9119: Layer already exists build 29-Sep-2016 16:47:13 610d2111cc7e: Layer already exists build 29-Sep-2016 16:47:13 124b4495c904: Layer already exists build 29-Sep-2016 16:47:13 7ef2865ddde9: Layer already exists build 29-Sep-2016 16:47:13 eb33f051084b: Layer already exists build 29-Sep-2016 16:47:13 dc65cb899fbc: Layer already exists build 29-Sep-2016 16:47:13 db585c947dc1: Layer already exists build 29-Sep-2016 16:47:13 3e907de58acd: Layer already exists build 29-Sep-2016 16:47:13 e458e997a991: Layer already exists build 29-Sep-2016 16:47:13 3d865816fc94: Layer already exists build 29-Sep-2016 16:47:13 b04095771c04: Layer already exists build 29-Sep-2016 16:47:13 latest: digest: sha256:de4e1d748449b65e2dcce4d87756ec2a27867dadd665fe7219f2d2483c1b916f size: 2825 build 29-Sep-2016 16:47:13 Untagged: 4716:latest build 29-Sep-2016 16:47:13 Sending build context to Docker daemon 66.05 kB build 29-Sep-2016 16:47:13 build 29-Sep-2016 16:47:14 Step 1 : FROM ncsa/clowder-extractors-python-base build 29-Sep-2016 16:47:14 ---> 8d903bf8cadc build 29-Sep-2016 16:47:14 Step 2 : MAINTAINER Yan Zhao build 29-Sep-2016 16:47:14 ---> Using cache build 29-Sep-2016 16:47:14 ---> d1ef7c140c15 build 29-Sep-2016 16:47:14 Step 3 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.ChemCBCExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Chem.py" build 29-Sep-2016 16:47:14 ---> Using cache build 29-Sep-2016 16:47:14 ---> 410f76d7f81b build 29-Sep-2016 16:47:14 Step 4 : USER root build 29-Sep-2016 16:47:14 ---> Using cache build 29-Sep-2016 16:47:14 ---> 610f1ff5950b build 29-Sep-2016 16:47:14 Step 5 : COPY requirements.txt /home/clowder/ build 29-Sep-2016 16:47:14 ---> Using cache build 29-Sep-2016 16:47:14 ---> e2e14362a38b build 29-Sep-2016 16:47:14 Step 6 : RUN pip install --upgrade pip build 29-Sep-2016 16:47:14 ---> Using cache build 29-Sep-2016 16:47:14 ---> 73ab151e73bd build 29-Sep-2016 16:47:14 Step 7 : RUN pip install -r /home/clowder/requirements.txt build 29-Sep-2016 16:47:14 ---> Using cache build 29-Sep-2016 16:47:14 ---> 48e5f93cbc95 build 29-Sep-2016 16:47:14 Step 8 : USER clowder build 29-Sep-2016 16:47:14 ---> Using cache build 29-Sep-2016 16:47:14 ---> 7777beb725c1 build 29-Sep-2016 16:47:14 Step 9 : COPY entrypoint.sh *.py *.json /home/clowder/ build 29-Sep-2016 16:47:14 ---> Using cache build 29-Sep-2016 16:47:14 ---> 8d0cb962bfe2 build 29-Sep-2016 16:47:14 Step 10 : ENTRYPOINT /home/clowder/entrypoint.sh build 29-Sep-2016 16:47:14 ---> Using cache build 29-Sep-2016 16:47:14 ---> a9b08b7573b5 build 29-Sep-2016 16:47:14 Step 11 : CMD extractor build 29-Sep-2016 16:47:14 ---> Using cache build 29-Sep-2016 16:47:14 ---> 7298087fafa6 build 29-Sep-2016 16:47:14 Successfully built 7298087fafa6 build 29-Sep-2016 16:47:14 The push refers to a repository [docker.io/ncsa/clowder-extractors-msc-chemcbc] build 29-Sep-2016 16:47:14 953360c8be1e: Preparing build 29-Sep-2016 16:47:14 b8c707dbd284: Preparing build 29-Sep-2016 16:47:14 84fee703dd53: Preparing build 29-Sep-2016 16:47:14 acd28ec9eb5d: Preparing build 29-Sep-2016 16:47:14 862e415b9119: Preparing build 29-Sep-2016 16:47:14 db585c947dc1: Preparing build 29-Sep-2016 16:47:14 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:14 e458e997a991: Preparing build 29-Sep-2016 16:47:14 eb33f051084b: Preparing build 29-Sep-2016 16:47:14 3e907de58acd: Preparing build 29-Sep-2016 16:47:14 b04095771c04: Preparing build 29-Sep-2016 16:47:14 3d865816fc94: Preparing build 29-Sep-2016 16:47:14 e458e997a991: Waiting build 29-Sep-2016 16:47:14 eb33f051084b: Waiting build 29-Sep-2016 16:47:14 3e907de58acd: Waiting build 29-Sep-2016 16:47:14 b04095771c04: Waiting build 29-Sep-2016 16:47:14 db585c947dc1: Waiting build 29-Sep-2016 16:47:14 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:14 3d865816fc94: Waiting build 29-Sep-2016 16:47:15 862e415b9119: Mounted from clowder/extractors-msc-islet build 29-Sep-2016 16:47:15 db585c947dc1: Mounted from clowder/extractors-msc-islet build 29-Sep-2016 16:47:16 953360c8be1e: Pushed build 29-Sep-2016 16:47:16 dc65cb899fbc: Mounted from clowder/extractors-msc-islet build 29-Sep-2016 16:47:16 e458e997a991: Mounted from clowder/extractors-msc-islet build 29-Sep-2016 16:47:16 eb33f051084b: Mounted from clowder/extractors-msc-islet build 29-Sep-2016 16:47:17 3e907de58acd: Mounted from clowder/extractors-msc-islet build 29-Sep-2016 16:47:17 b04095771c04: Mounted from clowder/extractors-msc-islet build 29-Sep-2016 16:47:17 acd28ec9eb5d: Pushed build 29-Sep-2016 16:47:17 3d865816fc94: Mounted from clowder/extractors-msc-islet build 29-Sep-2016 16:47:18 84fee703dd53: Pushed build 29-Sep-2016 16:47:20 b8c707dbd284: Pushed build 29-Sep-2016 16:47:22 master: digest: sha256:a47582f7bb0d2accd8fd35b1a5e5e6eb2f3d4d7613593de8f07e1a3e4c2cbd78 size: 2825 build 29-Sep-2016 16:47:23 The push refers to a repository [docker.io/clowder/extractors-msc-chemcbc] build 29-Sep-2016 16:47:23 953360c8be1e: Preparing build 29-Sep-2016 16:47:23 b8c707dbd284: Preparing build 29-Sep-2016 16:47:23 84fee703dd53: Preparing build 29-Sep-2016 16:47:23 acd28ec9eb5d: Preparing build 29-Sep-2016 16:47:23 862e415b9119: Preparing build 29-Sep-2016 16:47:23 db585c947dc1: Preparing build 29-Sep-2016 16:47:23 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:23 e458e997a991: Preparing build 29-Sep-2016 16:47:23 db585c947dc1: Waiting build 29-Sep-2016 16:47:23 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:23 eb33f051084b: Preparing build 29-Sep-2016 16:47:23 e458e997a991: Waiting build 29-Sep-2016 16:47:23 3e907de58acd: Preparing build 29-Sep-2016 16:47:23 b04095771c04: Preparing build 29-Sep-2016 16:47:23 3d865816fc94: Preparing build 29-Sep-2016 16:47:23 eb33f051084b: Waiting build 29-Sep-2016 16:47:23 3e907de58acd: Waiting build 29-Sep-2016 16:47:23 b04095771c04: Waiting build 29-Sep-2016 16:47:23 3d865816fc94: Waiting build 29-Sep-2016 16:47:24 acd28ec9eb5d: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:24 862e415b9119: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:24 953360c8be1e: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:24 84fee703dd53: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:24 b8c707dbd284: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:25 db585c947dc1: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:25 dc65cb899fbc: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:25 eb33f051084b: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:25 e458e997a991: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:25 3e907de58acd: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:25 b04095771c04: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:25 3d865816fc94: Mounted from ncsa/clowder-extractors-msc-chemcbc build 29-Sep-2016 16:47:27 master: digest: sha256:a47582f7bb0d2accd8fd35b1a5e5e6eb2f3d4d7613593de8f07e1a3e4c2cbd78 size: 2825 build 29-Sep-2016 16:47:28 The push refers to a repository [docker.io/ncsa/clowder-extractors-msc-chemcbc] build 29-Sep-2016 16:47:28 953360c8be1e: Preparing build 29-Sep-2016 16:47:28 b8c707dbd284: Preparing build 29-Sep-2016 16:47:28 84fee703dd53: Preparing build 29-Sep-2016 16:47:28 acd28ec9eb5d: Preparing build 29-Sep-2016 16:47:28 862e415b9119: Preparing build 29-Sep-2016 16:47:28 db585c947dc1: Preparing build 29-Sep-2016 16:47:28 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:28 e458e997a991: Preparing build 29-Sep-2016 16:47:28 eb33f051084b: Preparing build 29-Sep-2016 16:47:28 3e907de58acd: Preparing build 29-Sep-2016 16:47:28 b04095771c04: Preparing build 29-Sep-2016 16:47:28 3d865816fc94: Preparing build 29-Sep-2016 16:47:28 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:28 e458e997a991: Waiting build 29-Sep-2016 16:47:28 eb33f051084b: Waiting build 29-Sep-2016 16:47:28 3e907de58acd: Waiting build 29-Sep-2016 16:47:28 b04095771c04: Waiting build 29-Sep-2016 16:47:28 3d865816fc94: Waiting build 29-Sep-2016 16:47:28 db585c947dc1: Waiting build 29-Sep-2016 16:47:28 862e415b9119: Layer already exists build 29-Sep-2016 16:47:28 953360c8be1e: Layer already exists build 29-Sep-2016 16:47:28 b8c707dbd284: Layer already exists build 29-Sep-2016 16:47:28 84fee703dd53: Layer already exists build 29-Sep-2016 16:47:28 acd28ec9eb5d: Layer already exists build 29-Sep-2016 16:47:28 db585c947dc1: Layer already exists build 29-Sep-2016 16:47:28 e458e997a991: Layer already exists build 29-Sep-2016 16:47:28 dc65cb899fbc: Layer already exists build 29-Sep-2016 16:47:28 eb33f051084b: Layer already exists build 29-Sep-2016 16:47:28 3e907de58acd: Layer already exists build 29-Sep-2016 16:47:28 b04095771c04: Layer already exists build 29-Sep-2016 16:47:28 3d865816fc94: Layer already exists build 29-Sep-2016 16:47:29 latest: digest: sha256:a47582f7bb0d2accd8fd35b1a5e5e6eb2f3d4d7613593de8f07e1a3e4c2cbd78 size: 2825 build 29-Sep-2016 16:47:29 The push refers to a repository [docker.io/clowder/extractors-msc-chemcbc] build 29-Sep-2016 16:47:29 953360c8be1e: Preparing build 29-Sep-2016 16:47:29 b8c707dbd284: Preparing build 29-Sep-2016 16:47:29 84fee703dd53: Preparing build 29-Sep-2016 16:47:29 acd28ec9eb5d: Preparing build 29-Sep-2016 16:47:29 862e415b9119: Preparing build 29-Sep-2016 16:47:29 db585c947dc1: Preparing build 29-Sep-2016 16:47:29 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:29 e458e997a991: Preparing build 29-Sep-2016 16:47:29 eb33f051084b: Preparing build 29-Sep-2016 16:47:29 3e907de58acd: Preparing build 29-Sep-2016 16:47:29 b04095771c04: Preparing build 29-Sep-2016 16:47:29 3d865816fc94: Preparing build 29-Sep-2016 16:47:29 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:29 3e907de58acd: Waiting build 29-Sep-2016 16:47:29 b04095771c04: Waiting build 29-Sep-2016 16:47:29 e458e997a991: Waiting build 29-Sep-2016 16:47:29 3d865816fc94: Waiting build 29-Sep-2016 16:47:29 db585c947dc1: Waiting build 29-Sep-2016 16:47:29 eb33f051084b: Waiting build 29-Sep-2016 16:47:29 953360c8be1e: Layer already exists build 29-Sep-2016 16:47:29 b8c707dbd284: Layer already exists build 29-Sep-2016 16:47:29 acd28ec9eb5d: Layer already exists build 29-Sep-2016 16:47:29 862e415b9119: Layer already exists build 29-Sep-2016 16:47:29 84fee703dd53: Layer already exists build 29-Sep-2016 16:47:30 dc65cb899fbc: Layer already exists build 29-Sep-2016 16:47:30 eb33f051084b: Layer already exists build 29-Sep-2016 16:47:30 e458e997a991: Layer already exists build 29-Sep-2016 16:47:30 db585c947dc1: Layer already exists build 29-Sep-2016 16:47:30 3e907de58acd: Layer already exists build 29-Sep-2016 16:47:30 b04095771c04: Layer already exists build 29-Sep-2016 16:47:30 3d865816fc94: Layer already exists build 29-Sep-2016 16:47:31 latest: digest: sha256:a47582f7bb0d2accd8fd35b1a5e5e6eb2f3d4d7613593de8f07e1a3e4c2cbd78 size: 2825 build 29-Sep-2016 16:47:31 Untagged: 4716:latest build 29-Sep-2016 16:47:31 Sending build context to Docker daemon 198.1 kB build 29-Sep-2016 16:47:31 build 29-Sep-2016 16:47:32 Step 1 : FROM ncsa/clowder-extractors-python-base build 29-Sep-2016 16:47:32 ---> 8d903bf8cadc build 29-Sep-2016 16:47:32 Step 2 : MAINTAINER Yan Zhao build 29-Sep-2016 16:47:32 ---> Using cache build 29-Sep-2016 16:47:32 ---> d1ef7c140c15 build 29-Sep-2016 16:47:32 Step 3 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.MonitorExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Monitor.py" build 29-Sep-2016 16:47:32 ---> Using cache build 29-Sep-2016 16:47:32 ---> 52cb061d90a0 build 29-Sep-2016 16:47:32 Step 4 : USER root build 29-Sep-2016 16:47:32 ---> Using cache build 29-Sep-2016 16:47:32 ---> 932aa1174223 build 29-Sep-2016 16:47:32 Step 5 : COPY requirements.txt /home/clowder/ build 29-Sep-2016 16:47:32 ---> Using cache build 29-Sep-2016 16:47:32 ---> f78db71aedf2 build 29-Sep-2016 16:47:32 Step 6 : RUN pip install --upgrade pip build 29-Sep-2016 16:47:32 ---> Using cache build 29-Sep-2016 16:47:32 ---> cd1704234d4a build 29-Sep-2016 16:47:32 Step 7 : RUN pip install -r /home/clowder/requirements.txt build 29-Sep-2016 16:47:32 ---> Using cache build 29-Sep-2016 16:47:32 ---> e8cfeec123a3 build 29-Sep-2016 16:47:32 Step 8 : USER clowder build 29-Sep-2016 16:47:32 ---> Using cache build 29-Sep-2016 16:47:32 ---> 2d31b3635e2f build 29-Sep-2016 16:47:32 Step 9 : COPY entrypoint.sh *.py *.json /home/clowder/ build 29-Sep-2016 16:47:32 ---> Using cache build 29-Sep-2016 16:47:32 ---> 45639e54bc71 build 29-Sep-2016 16:47:32 Step 10 : ENTRYPOINT /home/clowder/entrypoint.sh build 29-Sep-2016 16:47:32 ---> Using cache build 29-Sep-2016 16:47:32 ---> aca69780b520 build 29-Sep-2016 16:47:32 Step 11 : CMD extractor build 29-Sep-2016 16:47:32 ---> Using cache build 29-Sep-2016 16:47:32 ---> fe9dcf9764f9 build 29-Sep-2016 16:47:32 Successfully built fe9dcf9764f9 build 29-Sep-2016 16:47:32 The push refers to a repository [docker.io/ncsa/clowder-extractors-msc-monitor] build 29-Sep-2016 16:47:32 282fffd50d24: Preparing build 29-Sep-2016 16:47:32 d299837a8cf9: Preparing build 29-Sep-2016 16:47:32 6ca6e0a08f24: Preparing build 29-Sep-2016 16:47:32 6b5a02552f10: Preparing build 29-Sep-2016 16:47:32 862e415b9119: Preparing build 29-Sep-2016 16:47:32 db585c947dc1: Preparing build 29-Sep-2016 16:47:32 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:32 e458e997a991: Preparing build 29-Sep-2016 16:47:32 eb33f051084b: Preparing build 29-Sep-2016 16:47:32 3e907de58acd: Preparing build 29-Sep-2016 16:47:32 b04095771c04: Preparing build 29-Sep-2016 16:47:32 3d865816fc94: Preparing build 29-Sep-2016 16:47:32 e458e997a991: Waiting build 29-Sep-2016 16:47:32 db585c947dc1: Waiting build 29-Sep-2016 16:47:32 b04095771c04: Waiting build 29-Sep-2016 16:47:32 eb33f051084b: Waiting build 29-Sep-2016 16:47:32 3d865816fc94: Waiting build 29-Sep-2016 16:47:32 3e907de58acd: Waiting build 29-Sep-2016 16:47:32 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:33 862e415b9119: Mounted from clowder/extractors-msc-chemcbc build 29-Sep-2016 16:47:33 db585c947dc1: Mounted from clowder/extractors-msc-chemcbc build 29-Sep-2016 16:47:34 dc65cb899fbc: Mounted from clowder/extractors-msc-chemcbc build 29-Sep-2016 16:47:34 6b5a02552f10: Pushed build 29-Sep-2016 16:47:34 e458e997a991: Mounted from clowder/extractors-msc-chemcbc build 29-Sep-2016 16:47:34 eb33f051084b: Mounted from clowder/extractors-msc-chemcbc build 29-Sep-2016 16:47:34 3e907de58acd: Mounted from clowder/extractors-msc-chemcbc build 29-Sep-2016 16:47:35 b04095771c04: Mounted from clowder/extractors-msc-chemcbc build 29-Sep-2016 16:47:35 3d865816fc94: Mounted from clowder/extractors-msc-chemcbc build 29-Sep-2016 16:47:36 282fffd50d24: Pushed build 29-Sep-2016 16:47:36 6ca6e0a08f24: Pushed build 29-Sep-2016 16:47:38 d299837a8cf9: Pushed build 29-Sep-2016 16:47:39 master: digest: sha256:ed4c754a3e338f6e3714214179b58e836b773a56d487ea770a1d6d73783aea9a size: 2825 build 29-Sep-2016 16:47:40 The push refers to a repository [docker.io/clowder/extractors-msc-monitor] build 29-Sep-2016 16:47:40 282fffd50d24: Preparing build 29-Sep-2016 16:47:40 d299837a8cf9: Preparing build 29-Sep-2016 16:47:40 6ca6e0a08f24: Preparing build 29-Sep-2016 16:47:40 6b5a02552f10: Preparing build 29-Sep-2016 16:47:40 862e415b9119: Preparing build 29-Sep-2016 16:47:40 db585c947dc1: Preparing build 29-Sep-2016 16:47:40 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:40 e458e997a991: Preparing build 29-Sep-2016 16:47:40 eb33f051084b: Preparing build 29-Sep-2016 16:47:40 3e907de58acd: Preparing build 29-Sep-2016 16:47:40 b04095771c04: Preparing build 29-Sep-2016 16:47:40 3d865816fc94: Preparing build 29-Sep-2016 16:47:40 e458e997a991: Waiting build 29-Sep-2016 16:47:40 eb33f051084b: Waiting build 29-Sep-2016 16:47:40 3e907de58acd: Waiting build 29-Sep-2016 16:47:40 b04095771c04: Waiting build 29-Sep-2016 16:47:40 db585c947dc1: Waiting build 29-Sep-2016 16:47:40 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:40 3d865816fc94: Waiting build 29-Sep-2016 16:47:41 6b5a02552f10: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:41 6ca6e0a08f24: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:41 282fffd50d24: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:41 862e415b9119: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:42 db585c947dc1: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:42 e458e997a991: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:42 dc65cb899fbc: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:42 eb33f051084b: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:42 3e907de58acd: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:42 d299837a8cf9: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:42 b04095771c04: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:43 3d865816fc94: Mounted from ncsa/clowder-extractors-msc-monitor build 29-Sep-2016 16:47:45 master: digest: sha256:ed4c754a3e338f6e3714214179b58e836b773a56d487ea770a1d6d73783aea9a size: 2825 build 29-Sep-2016 16:47:45 The push refers to a repository [docker.io/ncsa/clowder-extractors-msc-monitor] build 29-Sep-2016 16:47:45 282fffd50d24: Preparing build 29-Sep-2016 16:47:45 d299837a8cf9: Preparing build 29-Sep-2016 16:47:45 6ca6e0a08f24: Preparing build 29-Sep-2016 16:47:45 6b5a02552f10: Preparing build 29-Sep-2016 16:47:45 862e415b9119: Preparing build 29-Sep-2016 16:47:45 db585c947dc1: Preparing build 29-Sep-2016 16:47:45 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:45 e458e997a991: Preparing build 29-Sep-2016 16:47:45 eb33f051084b: Preparing build 29-Sep-2016 16:47:45 3e907de58acd: Preparing build 29-Sep-2016 16:47:45 b04095771c04: Preparing build 29-Sep-2016 16:47:45 3d865816fc94: Preparing build 29-Sep-2016 16:47:45 eb33f051084b: Waiting build 29-Sep-2016 16:47:45 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:45 e458e997a991: Waiting build 29-Sep-2016 16:47:45 3e907de58acd: Waiting build 29-Sep-2016 16:47:45 b04095771c04: Waiting build 29-Sep-2016 16:47:45 3d865816fc94: Waiting build 29-Sep-2016 16:47:45 862e415b9119: Layer already exists build 29-Sep-2016 16:47:45 282fffd50d24: Layer already exists build 29-Sep-2016 16:47:45 d299837a8cf9: Layer already exists build 29-Sep-2016 16:47:45 6ca6e0a08f24: Layer already exists build 29-Sep-2016 16:47:45 6b5a02552f10: Layer already exists build 29-Sep-2016 16:47:46 db585c947dc1: Layer already exists build 29-Sep-2016 16:47:46 eb33f051084b: Layer already exists build 29-Sep-2016 16:47:46 3e907de58acd: Layer already exists build 29-Sep-2016 16:47:46 e458e997a991: Layer already exists build 29-Sep-2016 16:47:46 dc65cb899fbc: Layer already exists build 29-Sep-2016 16:47:46 b04095771c04: Layer already exists build 29-Sep-2016 16:47:46 3d865816fc94: Layer already exists build 29-Sep-2016 16:47:46 latest: digest: sha256:ed4c754a3e338f6e3714214179b58e836b773a56d487ea770a1d6d73783aea9a size: 2825 build 29-Sep-2016 16:47:47 The push refers to a repository [docker.io/clowder/extractors-msc-monitor] build 29-Sep-2016 16:47:47 282fffd50d24: Preparing build 29-Sep-2016 16:47:47 d299837a8cf9: Preparing build 29-Sep-2016 16:47:47 6ca6e0a08f24: Preparing build 29-Sep-2016 16:47:47 6b5a02552f10: Preparing build 29-Sep-2016 16:47:47 862e415b9119: Preparing build 29-Sep-2016 16:47:47 db585c947dc1: Preparing build 29-Sep-2016 16:47:47 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:47 e458e997a991: Preparing build 29-Sep-2016 16:47:47 eb33f051084b: Preparing build 29-Sep-2016 16:47:47 3e907de58acd: Preparing build 29-Sep-2016 16:47:47 b04095771c04: Preparing build 29-Sep-2016 16:47:47 3d865816fc94: Preparing build 29-Sep-2016 16:47:47 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:47 e458e997a991: Waiting build 29-Sep-2016 16:47:47 eb33f051084b: Waiting build 29-Sep-2016 16:47:47 3e907de58acd: Waiting build 29-Sep-2016 16:47:47 b04095771c04: Waiting build 29-Sep-2016 16:47:47 3d865816fc94: Waiting build 29-Sep-2016 16:47:47 db585c947dc1: Waiting build 29-Sep-2016 16:47:47 282fffd50d24: Layer already exists build 29-Sep-2016 16:47:47 862e415b9119: Layer already exists build 29-Sep-2016 16:47:47 d299837a8cf9: Layer already exists build 29-Sep-2016 16:47:47 6ca6e0a08f24: Layer already exists build 29-Sep-2016 16:47:47 6b5a02552f10: Layer already exists build 29-Sep-2016 16:47:47 dc65cb899fbc: Layer already exists build 29-Sep-2016 16:47:47 eb33f051084b: Layer already exists build 29-Sep-2016 16:47:47 db585c947dc1: Layer already exists build 29-Sep-2016 16:47:47 3e907de58acd: Layer already exists build 29-Sep-2016 16:47:47 e458e997a991: Layer already exists build 29-Sep-2016 16:47:47 b04095771c04: Layer already exists build 29-Sep-2016 16:47:47 3d865816fc94: Layer already exists build 29-Sep-2016 16:47:48 latest: digest: sha256:ed4c754a3e338f6e3714214179b58e836b773a56d487ea770a1d6d73783aea9a size: 2825 build 29-Sep-2016 16:47:48 Untagged: 4716:latest build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 557.1 kB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 1.114 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 1.671 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 2.228 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 2.785 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 3.342 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 3.899 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 4.456 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 5.014 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 5.571 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 6.128 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 6.685 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 7.242 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 7.799 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 8.356 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 8.913 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 9.47 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 10.03 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 10.58 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 11.14 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 11.7 MB build 29-Sep-2016 16:47:48 Sending build context to Docker daemon 12.1 MB build 29-Sep-2016 16:47:48 build 29-Sep-2016 16:47:48 Step 1 : FROM ncsa/clowder-extractors-python-base build 29-Sep-2016 16:47:48 ---> 8d903bf8cadc build 29-Sep-2016 16:47:48 Step 2 : MAINTAINER Yan Zhao build 29-Sep-2016 16:47:48 ---> Using cache build 29-Sep-2016 16:47:48 ---> d1ef7c140c15 build 29-Sep-2016 16:47:48 Step 3 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.PhenotypeExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Phenotype.py" build 29-Sep-2016 16:47:48 ---> Using cache build 29-Sep-2016 16:47:48 ---> 288bb2268a91 build 29-Sep-2016 16:47:48 Step 4 : USER root build 29-Sep-2016 16:47:48 ---> Using cache build 29-Sep-2016 16:47:48 ---> 924d923f89be build 29-Sep-2016 16:47:48 Step 5 : COPY requirements.txt /home/clowder/ build 29-Sep-2016 16:47:48 ---> Using cache build 29-Sep-2016 16:47:48 ---> 025709afc5dc build 29-Sep-2016 16:47:48 Step 6 : RUN pip install --upgrade pip build 29-Sep-2016 16:47:48 ---> Using cache build 29-Sep-2016 16:47:48 ---> f55e640ede17 build 29-Sep-2016 16:47:48 Step 7 : RUN pip install -r /home/clowder/requirements.txt build 29-Sep-2016 16:47:48 ---> Using cache build 29-Sep-2016 16:47:48 ---> 6eb1f1ab07a0 build 29-Sep-2016 16:47:48 Step 8 : USER clowder build 29-Sep-2016 16:47:48 ---> Using cache build 29-Sep-2016 16:47:48 ---> a916c0e033de build 29-Sep-2016 16:47:48 Step 9 : COPY entrypoint.sh *.py *.json /home/clowder/ build 29-Sep-2016 16:47:48 ---> Using cache build 29-Sep-2016 16:47:48 ---> 4a7e398ed024 build 29-Sep-2016 16:47:48 Step 10 : ENTRYPOINT /home/clowder/entrypoint.sh build 29-Sep-2016 16:47:48 ---> Using cache build 29-Sep-2016 16:47:48 ---> 087f4e99511b build 29-Sep-2016 16:47:48 Step 11 : CMD extractor build 29-Sep-2016 16:47:48 ---> Using cache build 29-Sep-2016 16:47:48 ---> acde29d0ba2a build 29-Sep-2016 16:47:48 Successfully built acde29d0ba2a build 29-Sep-2016 16:47:49 The push refers to a repository [docker.io/ncsa/clowder-extractors-msc-phenotype] build 29-Sep-2016 16:47:49 99925621bee5: Preparing build 29-Sep-2016 16:47:49 df5d1aa49a79: Preparing build 29-Sep-2016 16:47:49 3cb4b45237fe: Preparing build 29-Sep-2016 16:47:49 f495fe3a9aaf: Preparing build 29-Sep-2016 16:47:49 862e415b9119: Preparing build 29-Sep-2016 16:47:49 db585c947dc1: Preparing build 29-Sep-2016 16:47:49 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:49 e458e997a991: Preparing build 29-Sep-2016 16:47:49 eb33f051084b: Preparing build 29-Sep-2016 16:47:49 3e907de58acd: Preparing build 29-Sep-2016 16:47:49 b04095771c04: Preparing build 29-Sep-2016 16:47:49 3d865816fc94: Preparing build 29-Sep-2016 16:47:49 eb33f051084b: Waiting build 29-Sep-2016 16:47:49 3e907de58acd: Waiting build 29-Sep-2016 16:47:49 3d865816fc94: Waiting build 29-Sep-2016 16:47:49 b04095771c04: Waiting build 29-Sep-2016 16:47:49 db585c947dc1: Waiting build 29-Sep-2016 16:47:49 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:49 e458e997a991: Waiting build 29-Sep-2016 16:47:49 862e415b9119: Mounted from clowder/extractors-msc-monitor build 29-Sep-2016 16:47:50 db585c947dc1: Mounted from clowder/extractors-msc-monitor build 29-Sep-2016 16:47:50 dc65cb899fbc: Mounted from clowder/extractors-msc-monitor build 29-Sep-2016 16:47:51 e458e997a991: Mounted from clowder/extractors-msc-monitor build 29-Sep-2016 16:47:52 eb33f051084b: Mounted from clowder/extractors-msc-monitor build 29-Sep-2016 16:47:52 3e907de58acd: Mounted from clowder/extractors-msc-monitor build 29-Sep-2016 16:47:52 99925621bee5: Pushed build 29-Sep-2016 16:47:53 b04095771c04: Mounted from clowder/extractors-msc-monitor build 29-Sep-2016 16:47:53 3cb4b45237fe: Pushed build 29-Sep-2016 16:47:53 f495fe3a9aaf: Pushed build 29-Sep-2016 16:47:54 3d865816fc94: Mounted from clowder/extractors-msc-monitor build 29-Sep-2016 16:47:54 df5d1aa49a79: Pushed build 29-Sep-2016 16:47:56 master: digest: sha256:3e28c5d3720f4c0abf6ec65688426f5e87ab37e0e81ec5d8b7e1cf5b96784b25 size: 2825 build 29-Sep-2016 16:47:56 The push refers to a repository [docker.io/clowder/extractors-msc-phenotype] build 29-Sep-2016 16:47:56 99925621bee5: Preparing build 29-Sep-2016 16:47:56 df5d1aa49a79: Preparing build 29-Sep-2016 16:47:56 3cb4b45237fe: Preparing build 29-Sep-2016 16:47:56 f495fe3a9aaf: Preparing build 29-Sep-2016 16:47:56 862e415b9119: Preparing build 29-Sep-2016 16:47:56 db585c947dc1: Preparing build 29-Sep-2016 16:47:56 dc65cb899fbc: Preparing build 29-Sep-2016 16:47:56 e458e997a991: Preparing build 29-Sep-2016 16:47:56 eb33f051084b: Preparing build 29-Sep-2016 16:47:56 3e907de58acd: Preparing build 29-Sep-2016 16:47:56 b04095771c04: Preparing build 29-Sep-2016 16:47:56 3d865816fc94: Preparing build 29-Sep-2016 16:47:56 db585c947dc1: Waiting build 29-Sep-2016 16:47:56 dc65cb899fbc: Waiting build 29-Sep-2016 16:47:56 e458e997a991: Waiting build 29-Sep-2016 16:47:56 eb33f051084b: Waiting build 29-Sep-2016 16:47:56 3e907de58acd: Waiting build 29-Sep-2016 16:47:56 b04095771c04: Waiting build 29-Sep-2016 16:47:56 3d865816fc94: Waiting build 29-Sep-2016 16:47:57 862e415b9119: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:47:57 3cb4b45237fe: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:47:57 99925621bee5: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:47:57 f495fe3a9aaf: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:47:57 df5d1aa49a79: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:47:58 db585c947dc1: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:47:58 dc65cb899fbc: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:47:58 e458e997a991: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:47:58 eb33f051084b: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:47:58 3e907de58acd: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:47:59 b04095771c04: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:47:59 3d865816fc94: Mounted from ncsa/clowder-extractors-msc-phenotype build 29-Sep-2016 16:48:00 master: digest: sha256:3e28c5d3720f4c0abf6ec65688426f5e87ab37e0e81ec5d8b7e1cf5b96784b25 size: 2825 build 29-Sep-2016 16:48:01 The push refers to a repository [docker.io/ncsa/clowder-extractors-msc-phenotype] build 29-Sep-2016 16:48:01 99925621bee5: Preparing build 29-Sep-2016 16:48:01 df5d1aa49a79: Preparing build 29-Sep-2016 16:48:01 3cb4b45237fe: Preparing build 29-Sep-2016 16:48:01 f495fe3a9aaf: Preparing build 29-Sep-2016 16:48:01 862e415b9119: Preparing build 29-Sep-2016 16:48:01 db585c947dc1: Preparing build 29-Sep-2016 16:48:01 dc65cb899fbc: Preparing build 29-Sep-2016 16:48:01 e458e997a991: Preparing build 29-Sep-2016 16:48:01 eb33f051084b: Preparing build 29-Sep-2016 16:48:01 3e907de58acd: Preparing build 29-Sep-2016 16:48:01 b04095771c04: Preparing build 29-Sep-2016 16:48:01 db585c947dc1: Waiting build 29-Sep-2016 16:48:01 dc65cb899fbc: Waiting build 29-Sep-2016 16:48:01 e458e997a991: Waiting build 29-Sep-2016 16:48:01 eb33f051084b: Waiting build 29-Sep-2016 16:48:01 3e907de58acd: Waiting build 29-Sep-2016 16:48:01 b04095771c04: Waiting build 29-Sep-2016 16:48:01 3d865816fc94: Preparing build 29-Sep-2016 16:48:01 3d865816fc94: Waiting build 29-Sep-2016 16:48:01 862e415b9119: Layer already exists build 29-Sep-2016 16:48:01 df5d1aa49a79: Layer already exists build 29-Sep-2016 16:48:01 f495fe3a9aaf: Layer already exists build 29-Sep-2016 16:48:01 99925621bee5: Layer already exists build 29-Sep-2016 16:48:01 3cb4b45237fe: Layer already exists build 29-Sep-2016 16:48:02 dc65cb899fbc: Layer already exists build 29-Sep-2016 16:48:02 3e907de58acd: Layer already exists build 29-Sep-2016 16:48:02 db585c947dc1: Layer already exists build 29-Sep-2016 16:48:02 e458e997a991: Layer already exists build 29-Sep-2016 16:48:02 eb33f051084b: Layer already exists build 29-Sep-2016 16:48:02 3d865816fc94: Layer already exists build 29-Sep-2016 16:48:02 b04095771c04: Layer already exists build 29-Sep-2016 16:48:02 latest: digest: sha256:3e28c5d3720f4c0abf6ec65688426f5e87ab37e0e81ec5d8b7e1cf5b96784b25 size: 2825 build 29-Sep-2016 16:48:02 The push refers to a repository [docker.io/clowder/extractors-msc-phenotype] build 29-Sep-2016 16:48:02 99925621bee5: Preparing build 29-Sep-2016 16:48:02 df5d1aa49a79: Preparing build 29-Sep-2016 16:48:02 3cb4b45237fe: Preparing build 29-Sep-2016 16:48:02 f495fe3a9aaf: Preparing build 29-Sep-2016 16:48:02 862e415b9119: Preparing build 29-Sep-2016 16:48:02 db585c947dc1: Preparing build 29-Sep-2016 16:48:02 dc65cb899fbc: Preparing build 29-Sep-2016 16:48:02 e458e997a991: Preparing build 29-Sep-2016 16:48:02 eb33f051084b: Preparing build 29-Sep-2016 16:48:02 3e907de58acd: Preparing build 29-Sep-2016 16:48:02 b04095771c04: Preparing build 29-Sep-2016 16:48:02 3d865816fc94: Preparing build 29-Sep-2016 16:48:02 db585c947dc1: Waiting build 29-Sep-2016 16:48:02 dc65cb899fbc: Waiting build 29-Sep-2016 16:48:02 3e907de58acd: Waiting build 29-Sep-2016 16:48:02 e458e997a991: Waiting build 29-Sep-2016 16:48:02 eb33f051084b: Waiting build 29-Sep-2016 16:48:02 b04095771c04: Waiting build 29-Sep-2016 16:48:02 3d865816fc94: Waiting build 29-Sep-2016 16:48:03 99925621bee5: Layer already exists build 29-Sep-2016 16:48:03 862e415b9119: Layer already exists build 29-Sep-2016 16:48:03 3cb4b45237fe: Layer already exists build 29-Sep-2016 16:48:03 df5d1aa49a79: Layer already exists build 29-Sep-2016 16:48:03 f495fe3a9aaf: Layer already exists build 29-Sep-2016 16:48:03 db585c947dc1: Layer already exists build 29-Sep-2016 16:48:03 eb33f051084b: Layer already exists build 29-Sep-2016 16:48:03 3e907de58acd: Layer already exists build 29-Sep-2016 16:48:03 e458e997a991: Layer already exists build 29-Sep-2016 16:48:03 dc65cb899fbc: Layer already exists build 29-Sep-2016 16:48:03 3d865816fc94: Layer already exists build 29-Sep-2016 16:48:03 b04095771c04: Layer already exists build 29-Sep-2016 16:48:03 latest: digest: sha256:3e28c5d3720f4c0abf6ec65688426f5e87ab37e0e81ec5d8b7e1cf5b96784b25 size: 2825 build 29-Sep-2016 16:48:03 Untagged: 4716:latest simple 29-Sep-2016 16:48:04 Finished task 'docker build' with result: Success simple 29-Sep-2016 16:48:04 Running post build plugin 'Docker Container Cleanup' simple 29-Sep-2016 16:48:04 Running post build plugin 'NCover Results Collector' simple 29-Sep-2016 16:48:04 Running post build plugin 'Clover Results Collector' simple 29-Sep-2016 16:48:04 Running post build plugin 'npm Cache Cleanup' simple 29-Sep-2016 16:48:04 Running post build plugin 'Artifact Copier' simple 29-Sep-2016 16:48:04 Finalising the build... simple 29-Sep-2016 16:48:04 Stopping timer. simple 29-Sep-2016 16:48:04 Build CATS-MSC1-JOB1-1 completed. simple 29-Sep-2016 16:48:04 Running on server: post build plugin 'NCover Results Collector' simple 29-Sep-2016 16:48:04 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 29-Sep-2016 16:48:04 Running on server: post build plugin 'Clover Delta Calculator' simple 29-Sep-2016 16:48:04 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 29-Sep-2016 16:48:04 All post build plugins have finished simple 29-Sep-2016 16:48:04 Generating build results summary... simple 29-Sep-2016 16:48:04 Saving build results to disk... simple 29-Sep-2016 16:48:04 Logging substituted variables... simple 29-Sep-2016 16:48:04 Indexing build results... simple 29-Sep-2016 16:48:04 Finished building CATS-MSC1-JOB1-1.