simple 08-Jul-2016 11:32:48 Build Clowder - pyclowder2 - rename_functions - Default Job #1 (CATS-PYC21-JOB1-1) started building on agent buildserver-2.ncsa.illinois.edu simple 08-Jul-2016 11:32:48 Remote Agent simple 08-Jul-2016 11:32:48 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC21-JOB1 simple 08-Jul-2016 11:32:48 Executing build Clowder - pyclowder2 - rename_functions - Default Job #1 (CATS-PYC21-JOB1-1) simple 08-Jul-2016 11:32:48 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 08-Jul-2016 11:32:48 Updating source code to revision: 49471554ad34ca792e44a19cbc0862a0547083bf simple 08-Jul-2016 11:32:48 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC21-JOB1/.git'. simple 08-Jul-2016 11:32:48 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC21-JOB1/.git/ simple 08-Jul-2016 11:32:49 Fetching 'refs/heads/rename_functions' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git'. Will try to do a shallow fetch. simple 08-Jul-2016 11:32:49 Warning: Permanently added '[127.0.0.1]:36558' (RSA) to the list of known hosts. simple 08-Jul-2016 11:32:49 From ssh://127.0.0.1:36558/cats/pyclowder2 simple 08-Jul-2016 11:32:49 * [new branch] rename_functions -> rename_functions simple 08-Jul-2016 11:32:49 Checking out revision 49471554ad34ca792e44a19cbc0862a0547083bf. simple 08-Jul-2016 11:32:49 Switched to branch 'rename_functions' simple 08-Jul-2016 11:32:49 Updated source code to revision: 49471554ad34ca792e44a19cbc0862a0547083bf simple 08-Jul-2016 11:32:49 Finished task 'Checkout Default Repository' with result: Success simple 08-Jul-2016 11:32:49 Running pre-build action: VCS Version Collector simple 08-Jul-2016 11:32:49 Starting task 'docker build and push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 08-Jul-2016 11:32:49 Beginning to execute external process for build 'Clowder - pyclowder2 - rename_functions - Default Job #1 (CATS-PYC21-JOB1-1)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC21-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=rename_functions\nbamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster\nbamboo_repository_revision_number=49471554ad34ca792e44a19cbc0862a0547083bf\nbamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC21-JOB1-1\nbamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build\nbamboo_planRepository_1_name=pyclowder2\nbamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC21-JOB1\nbamboo_buildKey=CATS-PYC21-JOB1\nbamboo_capability_system_os=linux\nbamboo_repository_120946703_name=pyclowder2\nbamboo_shortPlanName=rename_functions\nbamboo_planRepository_name=pyclowder2\nbamboo_buildNumber=1\nbamboo_shortJobName=Default Job\nbamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC21-JOB1-1\nbamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git\nbamboo_repository_120946703_git_username=\nbamboo_agentId=106758145\nbamboo_planName=Clowder - pyclowder2 - 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build 08-Jul-2016 11:32:49 Building : clowder/pyclowder2:[latest] from . build 08-Jul-2016 11:32:50 Sending build context to Docker daemon 68.1 kB build 08-Jul-2016 11:32:50 build 08-Jul-2016 11:32:50 Step 1 : FROM ubuntu:14.04 build 08-Jul-2016 11:32:50 ---> 38c759202e30 build 08-Jul-2016 11:32:50 Step 2 : MAINTAINER Rob Kooper build 08-Jul-2016 11:32:50 ---> Using cache build 08-Jul-2016 11:32:50 ---> b9f80943ab30 build 08-Jul-2016 11:32:50 Step 3 : COPY clowder/* /tmp/clowder/clowder/ build 08-Jul-2016 11:32:50 ---> 0fd16d81db5f build 08-Jul-2016 11:32:50 Removing intermediate container 254e859a66e7 build 08-Jul-2016 11:32:50 Step 4 : COPY setup.py requirements.txt /tmp/clowder/ build 08-Jul-2016 11:32:50 ---> 895ebc820e0d build 08-Jul-2016 11:32:50 Removing intermediate container 8c4cc9cd4229 build 08-Jul-2016 11:32:50 Step 5 : RUN apt-get update && apt-get install -y --no-install-recommends python python-pip && rm -rf /var/lib/apt/lists/* && pip install --upgrade -r /tmp/clowder/requirements.txt && pip install --upgrade /tmp/clowder && rm -rf /tmp/clowder && adduser --system clowder build 08-Jul-2016 11:32:50 ---> Running in cb61921f00e2 build 08-Jul-2016 11:32:51 Ign http://archive.ubuntu.com trusty InRelease build 08-Jul-2016 11:32:52 Get:1 http://archive.ubuntu.com trusty-updates InRelease [65.9 kB] build 08-Jul-2016 11:32:52 Get:2 http://archive.ubuntu.com trusty-security InRelease [65.9 kB] build 08-Jul-2016 11:32:52 Get:3 http://archive.ubuntu.com trusty Release.gpg [933 B] build 08-Jul-2016 11:32:52 Get:4 http://archive.ubuntu.com trusty Release [58.5 kB] build 08-Jul-2016 11:32:52 Get:5 http://archive.ubuntu.com trusty-updates/main Sources [350 kB] build 08-Jul-2016 11:32:53 Get:6 http://archive.ubuntu.com trusty-updates/restricted Sources [5217 B] build 08-Jul-2016 11:32:53 Get:7 http://archive.ubuntu.com trusty-updates/universe Sources [198 kB] build 08-Jul-2016 11:32:53 Get:8 http://archive.ubuntu.com trusty-updates/main amd64 Packages [991 kB] build 08-Jul-2016 11:32:53 Get:9 http://archive.ubuntu.com trusty-updates/restricted amd64 Packages [23.5 kB] build 08-Jul-2016 11:32:53 Get:10 http://archive.ubuntu.com trusty-updates/universe amd64 Packages [469 kB] build 08-Jul-2016 11:32:53 Get:11 http://archive.ubuntu.com trusty-security/main Sources [149 kB] build 08-Jul-2016 11:32:53 Get:12 http://archive.ubuntu.com trusty-security/restricted Sources [3920 B] build 08-Jul-2016 11:32:54 Get:13 http://archive.ubuntu.com trusty-security/universe Sources [44.1 kB] build 08-Jul-2016 11:32:54 Get:14 http://archive.ubuntu.com trusty-security/main amd64 Packages [629 kB] build 08-Jul-2016 11:32:54 Get:15 http://archive.ubuntu.com trusty-security/restricted amd64 Packages [20.2 kB] build 08-Jul-2016 11:32:54 Get:16 http://archive.ubuntu.com trusty-security/universe amd64 Packages [170 kB] build 08-Jul-2016 11:32:54 Get:17 http://archive.ubuntu.com trusty/main Sources [1335 kB] build 08-Jul-2016 11:32:54 Get:18 http://archive.ubuntu.com trusty/restricted Sources [5335 B] build 08-Jul-2016 11:32:54 Get:19 http://archive.ubuntu.com trusty/universe Sources [7926 kB] build 08-Jul-2016 11:32:56 Get:20 http://archive.ubuntu.com trusty/main amd64 Packages [1743 kB] build 08-Jul-2016 11:32:56 Get:21 http://archive.ubuntu.com trusty/restricted amd64 Packages [16.0 kB] build 08-Jul-2016 11:32:56 Get:22 http://archive.ubuntu.com trusty/universe amd64 Packages [7589 kB] build 08-Jul-2016 11:32:59 Fetched 21.9 MB in 7s (2956 kB/s) build 08-Jul-2016 11:33:01 Reading package lists... build 08-Jul-2016 11:33:04 Reading package lists... build 08-Jul-2016 11:33:04 Building dependency tree... build 08-Jul-2016 11:33:04 Reading state information... build 08-Jul-2016 11:33:04 The following extra packages will be installed: build 08-Jul-2016 11:33:04 ca-certificates libpython-stdlib libpython2.7-minimal libpython2.7-stdlib build 08-Jul-2016 11:33:04 openssl python-chardet python-chardet-whl python-colorama build 08-Jul-2016 11:33:04 python-colorama-whl python-distlib python-distlib-whl python-html5lib build 08-Jul-2016 11:33:04 python-html5lib-whl python-minimal python-pip-whl python-pkg-resources build 08-Jul-2016 11:33:04 python-requests python-requests-whl python-setuptools python-setuptools-whl build 08-Jul-2016 11:33:04 python-six python-six-whl python-urllib3 python-urllib3-whl python2.7 build 08-Jul-2016 11:33:04 python2.7-minimal python3-pkg-resources build 08-Jul-2016 11:33:04 Suggested packages: build 08-Jul-2016 11:33:04 python-doc python-tk python-genshi python-lxml python-distribute build 08-Jul-2016 11:33:04 python-distribute-doc python2.7-doc binutils binfmt-support build 08-Jul-2016 11:33:04 python3-setuptools build 08-Jul-2016 11:33:04 Recommended packages: build 08-Jul-2016 11:33:04 build-essential python-dev-all python-wheel build 08-Jul-2016 11:33:04 The following NEW packages will be installed: build 08-Jul-2016 11:33:04 ca-certificates libpython-stdlib libpython2.7-minimal libpython2.7-stdlib build 08-Jul-2016 11:33:04 openssl python python-chardet python-chardet-whl python-colorama build 08-Jul-2016 11:33:04 python-colorama-whl python-distlib python-distlib-whl python-html5lib build 08-Jul-2016 11:33:04 python-html5lib-whl python-minimal python-pip python-pip-whl build 08-Jul-2016 11:33:04 python-pkg-resources python-requests python-requests-whl python-setuptools build 08-Jul-2016 11:33:04 python-setuptools-whl python-six python-six-whl python-urllib3 build 08-Jul-2016 11:33:04 python-urllib3-whl python2.7 python2.7-minimal python3-pkg-resources build 08-Jul-2016 11:33:06 0 upgraded, 29 newly installed, 0 to remove and 1 not upgraded. build 08-Jul-2016 11:33:06 Need to get 6334 kB of archives. build 08-Jul-2016 11:33:06 After this operation, 22.8 MB of additional disk space will be used. build 08-Jul-2016 11:33:06 Get:1 http://archive.ubuntu.com/ubuntu/ trusty-updates/main libpython2.7-minimal amd64 2.7.6-8ubuntu0.2 [308 kB] build 08-Jul-2016 11:33:06 Get:2 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python2.7-minimal amd64 2.7.6-8ubuntu0.2 [1185 kB] build 08-Jul-2016 11:33:07 Get:3 http://archive.ubuntu.com/ubuntu/ trusty-updates/main openssl amd64 1.0.1f-1ubuntu2.19 [490 kB] build 08-Jul-2016 11:33:07 Get:4 http://archive.ubuntu.com/ubuntu/ trusty-updates/main ca-certificates all 20160104ubuntu0.14.04.1 [190 kB] build 08-Jul-2016 11:33:07 Get:5 http://archive.ubuntu.com/ubuntu/ trusty-updates/main libpython2.7-stdlib amd64 2.7.6-8ubuntu0.2 [1869 kB] build 08-Jul-2016 11:33:07 Get:6 http://archive.ubuntu.com/ubuntu/ trusty/main libpython-stdlib amd64 2.7.5-5ubuntu3 [7012 B] build 08-Jul-2016 11:33:07 Get:7 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python2.7 amd64 2.7.6-8ubuntu0.2 [196 kB] build 08-Jul-2016 11:33:07 Get:8 http://archive.ubuntu.com/ubuntu/ trusty/main python-minimal amd64 2.7.5-5ubuntu3 [27.5 kB] build 08-Jul-2016 11:33:07 Get:9 http://archive.ubuntu.com/ubuntu/ trusty/main python amd64 2.7.5-5ubuntu3 [134 kB] build 08-Jul-2016 11:33:08 Get:10 http://archive.ubuntu.com/ubuntu/ trusty/main python-chardet all 2.0.1-2build2 [106 kB] build 08-Jul-2016 11:33:08 Get:11 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python3-pkg-resources all 3.3-1ubuntu2 [31.7 kB] build 08-Jul-2016 11:33:08 Get:12 http://archive.ubuntu.com/ubuntu/ trusty-updates/universe python-chardet-whl all 2.2.1-2~ubuntu1 [170 kB] build 08-Jul-2016 11:33:08 Get:13 http://archive.ubuntu.com/ubuntu/ trusty-updates/universe python-colorama all 0.2.5-0.1ubuntu2 [18.4 kB] build 08-Jul-2016 11:33:08 Get:14 http://archive.ubuntu.com/ubuntu/ trusty-updates/universe python-colorama-whl all 0.2.5-0.1ubuntu2 [18.2 kB] build 08-Jul-2016 11:33:08 Get:15 http://archive.ubuntu.com/ubuntu/ trusty-updates/universe python-distlib all 0.1.8-1ubuntu1 [113 kB] build 08-Jul-2016 11:33:08 Get:16 http://archive.ubuntu.com/ubuntu/ trusty-updates/universe python-distlib-whl all 0.1.8-1ubuntu1 [140 kB] build 08-Jul-2016 11:33:08 Get:17 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python-six all 1.5.2-1ubuntu1 [8238 B] build 08-Jul-2016 11:33:08 Get:18 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python-html5lib all 0.999-3~ubuntu1 [83.5 kB] build 08-Jul-2016 11:33:08 Get:19 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python-html5lib-whl all 0.999-3~ubuntu1 [109 kB] build 08-Jul-2016 11:33:09 Get:20 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python-six-whl all 1.5.2-1ubuntu1 [10.5 kB] build 08-Jul-2016 11:33:09 Get:21 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python-urllib3-whl all 1.7.1-1ubuntu4 [64.0 kB] build 08-Jul-2016 11:33:09 Get:22 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python-requests-whl all 2.2.1-1ubuntu0.3 [227 kB] build 08-Jul-2016 11:33:09 Get:23 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python-setuptools-whl all 3.3-1ubuntu2 [244 kB] build 08-Jul-2016 11:33:09 Get:24 http://archive.ubuntu.com/ubuntu/ trusty-updates/universe python-pip-whl all 1.5.4-1ubuntu3 [111 kB] build 08-Jul-2016 11:33:09 Get:25 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python-pkg-resources all 3.3-1ubuntu2 [61.9 kB] build 08-Jul-2016 11:33:09 Get:26 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python-urllib3 all 1.7.1-1ubuntu4 [39.5 kB] build 08-Jul-2016 11:33:09 Get:27 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python-requests all 2.2.1-1ubuntu0.3 [43.1 kB] build 08-Jul-2016 11:33:10 Get:28 http://archive.ubuntu.com/ubuntu/ trusty-updates/main python-setuptools all 3.3-1ubuntu2 [230 kB] build 08-Jul-2016 11:33:10 Get:29 http://archive.ubuntu.com/ubuntu/ trusty-updates/universe python-pip all 1.5.4-1ubuntu3 [97.2 kB] build 08-Jul-2016 11:33:10 debconf: unable to initialize frontend: Dialog build 08-Jul-2016 11:33:10 debconf: (TERM is not set, so the dialog frontend is not usable.) build 08-Jul-2016 11:33:10 debconf: falling back to frontend: Readline build 08-Jul-2016 11:33:10 debconf: unable to initialize frontend: Readline build 08-Jul-2016 11:33:10 debconf: (This frontend requires a controlling tty.) build 08-Jul-2016 11:33:10 debconf: falling back to frontend: Teletype build 08-Jul-2016 11:33:10 dpkg-preconfigure: unable to re-open stdin: build 08-Jul-2016 11:33:10 Fetched 6334 kB in 4s (1525 kB/s) build 08-Jul-2016 11:33:10 Selecting previously unselected package libpython2.7-minimal:amd64. build 08-Jul-2016 11:33:11 (Reading database ... 11558 files and directories currently installed.) build 08-Jul-2016 11:33:11 Preparing to unpack .../libpython2.7-minimal_2.7.6-8ubuntu0.2_amd64.deb ... build 08-Jul-2016 11:33:11 Unpacking libpython2.7-minimal:amd64 (2.7.6-8ubuntu0.2) ... build 08-Jul-2016 11:33:11 Selecting previously unselected package python2.7-minimal. build 08-Jul-2016 11:33:11 Preparing to unpack .../python2.7-minimal_2.7.6-8ubuntu0.2_amd64.deb ... build 08-Jul-2016 11:33:11 Unpacking python2.7-minimal (2.7.6-8ubuntu0.2) ... build 08-Jul-2016 11:33:11 Selecting previously unselected package openssl. build 08-Jul-2016 11:33:11 Preparing to unpack .../openssl_1.0.1f-1ubuntu2.19_amd64.deb ... build 08-Jul-2016 11:33:11 Unpacking openssl (1.0.1f-1ubuntu2.19) ... build 08-Jul-2016 11:33:11 Selecting previously unselected package ca-certificates. build 08-Jul-2016 11:33:11 Preparing to unpack .../ca-certificates_20160104ubuntu0.14.04.1_all.deb ... build 08-Jul-2016 11:33:11 Unpacking ca-certificates (20160104ubuntu0.14.04.1) ... build 08-Jul-2016 11:33:11 Selecting previously unselected package libpython2.7-stdlib:amd64. build 08-Jul-2016 11:33:11 Preparing to unpack .../libpython2.7-stdlib_2.7.6-8ubuntu0.2_amd64.deb ... build 08-Jul-2016 11:33:11 Unpacking libpython2.7-stdlib:amd64 (2.7.6-8ubuntu0.2) ... build 08-Jul-2016 11:33:11 Selecting previously unselected package libpython-stdlib:amd64. build 08-Jul-2016 11:33:11 Preparing to unpack .../libpython-stdlib_2.7.5-5ubuntu3_amd64.deb ... build 08-Jul-2016 11:33:11 Unpacking libpython-stdlib:amd64 (2.7.5-5ubuntu3) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python2.7. build 08-Jul-2016 11:33:12 Preparing to unpack .../python2.7_2.7.6-8ubuntu0.2_amd64.deb ... build 08-Jul-2016 11:33:12 Unpacking python2.7 (2.7.6-8ubuntu0.2) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-minimal. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-minimal_2.7.5-5ubuntu3_amd64.deb ... build 08-Jul-2016 11:33:12 Unpacking python-minimal (2.7.5-5ubuntu3) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python. build 08-Jul-2016 11:33:12 Preparing to unpack .../python_2.7.5-5ubuntu3_amd64.deb ... build 08-Jul-2016 11:33:12 Unpacking python (2.7.5-5ubuntu3) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-chardet. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-chardet_2.0.1-2build2_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-chardet (2.0.1-2build2) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python3-pkg-resources. build 08-Jul-2016 11:33:12 Preparing to unpack .../python3-pkg-resources_3.3-1ubuntu2_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python3-pkg-resources (3.3-1ubuntu2) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-chardet-whl. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-chardet-whl_2.2.1-2~ubuntu1_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-chardet-whl (2.2.1-2~ubuntu1) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-colorama. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-colorama_0.2.5-0.1ubuntu2_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-colorama (0.2.5-0.1ubuntu2) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-colorama-whl. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-colorama-whl_0.2.5-0.1ubuntu2_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-colorama-whl (0.2.5-0.1ubuntu2) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-distlib. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-distlib_0.1.8-1ubuntu1_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-distlib (0.1.8-1ubuntu1) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-distlib-whl. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-distlib-whl_0.1.8-1ubuntu1_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-distlib-whl (0.1.8-1ubuntu1) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-six. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-six_1.5.2-1ubuntu1_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-six (1.5.2-1ubuntu1) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-html5lib. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-html5lib_0.999-3~ubuntu1_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-html5lib (0.999-3~ubuntu1) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-html5lib-whl. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-html5lib-whl_0.999-3~ubuntu1_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-html5lib-whl (0.999-3~ubuntu1) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-six-whl. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-six-whl_1.5.2-1ubuntu1_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-six-whl (1.5.2-1ubuntu1) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-urllib3-whl. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-urllib3-whl_1.7.1-1ubuntu4_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-urllib3-whl (1.7.1-1ubuntu4) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-requests-whl. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-requests-whl_2.2.1-1ubuntu0.3_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-requests-whl (2.2.1-1ubuntu0.3) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-setuptools-whl. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-setuptools-whl_3.3-1ubuntu2_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-setuptools-whl (3.3-1ubuntu2) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-pip-whl. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-pip-whl_1.5.4-1ubuntu3_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-pip-whl (1.5.4-1ubuntu3) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-pkg-resources. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-pkg-resources_3.3-1ubuntu2_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-pkg-resources (3.3-1ubuntu2) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-urllib3. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-urllib3_1.7.1-1ubuntu4_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-urllib3 (1.7.1-1ubuntu4) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-requests. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-requests_2.2.1-1ubuntu0.3_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-requests (2.2.1-1ubuntu0.3) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-setuptools. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-setuptools_3.3-1ubuntu2_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-setuptools (3.3-1ubuntu2) ... build 08-Jul-2016 11:33:12 Selecting previously unselected package python-pip. build 08-Jul-2016 11:33:12 Preparing to unpack .../python-pip_1.5.4-1ubuntu3_all.deb ... build 08-Jul-2016 11:33:12 Unpacking python-pip (1.5.4-1ubuntu3) ... build 08-Jul-2016 11:33:13 Processing triggers for mime-support (3.54ubuntu1.1) ... build 08-Jul-2016 11:33:13 Setting up libpython2.7-minimal:amd64 (2.7.6-8ubuntu0.2) ... build 08-Jul-2016 11:33:13 Setting up python2.7-minimal (2.7.6-8ubuntu0.2) ... build 08-Jul-2016 11:33:13 Linking and byte-compiling packages for runtime python2.7... build 08-Jul-2016 11:33:14 Setting up openssl (1.0.1f-1ubuntu2.19) ... build 08-Jul-2016 11:33:14 Setting up ca-certificates (20160104ubuntu0.14.04.1) ... build 08-Jul-2016 11:33:15 debconf: unable to initialize frontend: Dialog build 08-Jul-2016 11:33:15 debconf: (TERM is not set, so the dialog frontend is not usable.) build 08-Jul-2016 11:33:15 debconf: falling back to frontend: Readline build 08-Jul-2016 11:33:15 debconf: unable to initialize frontend: Readline build 08-Jul-2016 11:33:15 debconf: (This frontend requires a controlling tty.) build 08-Jul-2016 11:33:15 debconf: falling back to frontend: Teletype build 08-Jul-2016 11:33:15 Setting up libpython2.7-stdlib:amd64 (2.7.6-8ubuntu0.2) ... build 08-Jul-2016 11:33:15 Setting up libpython-stdlib:amd64 (2.7.5-5ubuntu3) ... build 08-Jul-2016 11:33:15 Setting up python2.7 (2.7.6-8ubuntu0.2) ... build 08-Jul-2016 11:33:17 Setting up python-minimal (2.7.5-5ubuntu3) ... build 08-Jul-2016 11:33:17 Setting up python (2.7.5-5ubuntu3) ... build 08-Jul-2016 11:33:17 Setting up python-chardet (2.0.1-2build2) ... build 08-Jul-2016 11:33:18 Setting up python3-pkg-resources (3.3-1ubuntu2) ... build 08-Jul-2016 11:33:18 Setting up python-chardet-whl (2.2.1-2~ubuntu1) ... build 08-Jul-2016 11:33:18 Setting up python-colorama (0.2.5-0.1ubuntu2) ... build 08-Jul-2016 11:33:19 Setting up python-colorama-whl (0.2.5-0.1ubuntu2) ... build 08-Jul-2016 11:33:19 Setting up python-distlib (0.1.8-1ubuntu1) ... build 08-Jul-2016 11:33:19 Setting up python-distlib-whl (0.1.8-1ubuntu1) ... build 08-Jul-2016 11:33:19 Setting up python-six (1.5.2-1ubuntu1) ... build 08-Jul-2016 11:33:19 Setting up python-html5lib (0.999-3~ubuntu1) ... build 08-Jul-2016 11:33:19 Setting up python-html5lib-whl (0.999-3~ubuntu1) ... build 08-Jul-2016 11:33:19 Setting up python-six-whl (1.5.2-1ubuntu1) ... build 08-Jul-2016 11:33:19 Setting up python-urllib3-whl (1.7.1-1ubuntu4) ... build 08-Jul-2016 11:33:19 Setting up python-requests-whl (2.2.1-1ubuntu0.3) ... build 08-Jul-2016 11:33:19 Setting up python-setuptools-whl (3.3-1ubuntu2) ... build 08-Jul-2016 11:33:19 Setting up python-pip-whl (1.5.4-1ubuntu3) ... build 08-Jul-2016 11:33:19 Setting up python-pkg-resources (3.3-1ubuntu2) ... build 08-Jul-2016 11:33:20 Setting up python-urllib3 (1.7.1-1ubuntu4) ... build 08-Jul-2016 11:33:20 Setting up python-requests (2.2.1-1ubuntu0.3) ... build 08-Jul-2016 11:33:20 Setting up python-setuptools (3.3-1ubuntu2) ... build 08-Jul-2016 11:33:20 Setting up python-pip (1.5.4-1ubuntu3) ... build 08-Jul-2016 11:33:21 Processing triggers for ca-certificates (20160104ubuntu0.14.04.1) ... build 08-Jul-2016 11:33:24 Updating certificates in /etc/ssl/certs... 173 added, 0 removed; done. build 08-Jul-2016 11:33:24 Running hooks in /etc/ca-certificates/update.d....done. build 08-Jul-2016 11:33:25 Downloading/unpacking enum34==1.1.6 (from -r /tmp/clowder/requirements.txt (line 1)) build 08-Jul-2016 11:33:25 Downloading enum34-1.1.6-py2-none-any.whl build 08-Jul-2016 11:33:25 Downloading/unpacking pika==0.10.0 (from -r /tmp/clowder/requirements.txt (line 2)) build 08-Jul-2016 11:33:25 Downloading/unpacking PyYAML==3.11 (from -r /tmp/clowder/requirements.txt (line 3)) build 08-Jul-2016 11:33:25 Running setup.py (path:/tmp/pip_build_root/PyYAML/setup.py) egg_info for package PyYAML build 08-Jul-2016 11:33:26 build 08-Jul-2016 11:33:26 Downloading/unpacking requests==2.10.0 (from -r /tmp/clowder/requirements.txt (line 4)) build 08-Jul-2016 11:33:26 Downloading/unpacking wheel==0.24.0 (from -r /tmp/clowder/requirements.txt (line 5)) build 08-Jul-2016 11:33:26 Installing collected packages: enum34, pika, PyYAML, requests, wheel build 08-Jul-2016 11:33:26 Running setup.py install for PyYAML build 08-Jul-2016 11:33:26 checking if libyaml is compilable build 08-Jul-2016 11:33:26 x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -I/usr/include/python2.7 -c build/temp.linux-x86_64-2.7/check_libyaml.c -o build/temp.linux-x86_64-2.7/check_libyaml.o build 08-Jul-2016 11:33:26 unable to execute 'x86_64-linux-gnu-gcc': No such file or directory build 08-Jul-2016 11:33:26 build 08-Jul-2016 11:33:26 libyaml is not found or a compiler error: forcing --without-libyaml build 08-Jul-2016 11:33:26 (if libyaml is installed correctly, you may need to build 08-Jul-2016 11:33:26 specify the option --include-dirs or uncomment and build 08-Jul-2016 11:33:26 modify the parameter include_dirs in setup.cfg) build 08-Jul-2016 11:33:26 build 08-Jul-2016 11:33:26 Found existing installation: requests 2.2.1 build 08-Jul-2016 11:33:26 Not uninstalling requests at /usr/lib/python2.7/dist-packages, owned by OS build 08-Jul-2016 11:33:27 Successfully installed enum34 pika PyYAML requests wheel build 08-Jul-2016 11:33:27 Cleaning up... build 08-Jul-2016 11:33:27 Unpacking /tmp/clowder build 08-Jul-2016 11:33:27 Running setup.py (path:/tmp/pip-R7GJKF-build/setup.py) egg_info for package from file:///tmp/clowder build 08-Jul-2016 11:33:28 build 08-Jul-2016 11:33:28 Installing collected packages: clowder build 08-Jul-2016 11:33:28 Running setup.py install for clowder build 08-Jul-2016 11:33:28 build 08-Jul-2016 11:33:28 Successfully installed clowder build 08-Jul-2016 11:33:28 Cleaning up... build 08-Jul-2016 11:33:28 Adding system user `clowder' (UID 102) ... build 08-Jul-2016 11:33:28 Adding new user `clowder' (UID 102) with group `nogroup' ... build 08-Jul-2016 11:33:28 Creating home directory `/home/clowder' ... build 08-Jul-2016 11:33:32 ---> 92007f838439 build 08-Jul-2016 11:33:32 Removing intermediate container cb61921f00e2 build 08-Jul-2016 11:33:32 Successfully built 92007f838439 build 08-Jul-2016 11:33:32 Untagged: 21777:latest build 08-Jul-2016 11:33:32 Building : clowder/extractors-wordcount:[latest] from sample-extractors/wordcount build 08-Jul-2016 11:33:32 Sending build context to Docker daemon 14.34 kB build 08-Jul-2016 11:33:32 build 08-Jul-2016 11:33:32 Step 1 : FROM ncsa/pyclowder2:latest build 08-Jul-2016 11:33:32 ---> 54b54c4e3975 build 08-Jul-2016 11:33:32 Step 2 : MAINTAINER Rob Kooper build 08-Jul-2016 11:33:32 ---> Using cache build 08-Jul-2016 11:33:32 ---> 87b4c8d7f922 build 08-Jul-2016 11:33:32 Step 3 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" REGISTRATION_ENDPOINTS "https://clowder.ncsa.illinois.edu/extractors" MAIN_SCRIPT "wordcount.py" build 08-Jul-2016 11:33:32 ---> Using cache build 08-Jul-2016 11:33:32 ---> 000b4c67262b build 08-Jul-2016 11:33:32 Step 4 : USER clowder build 08-Jul-2016 11:33:32 ---> Using cache build 08-Jul-2016 11:33:32 ---> 79fd873c22e6 build 08-Jul-2016 11:33:32 Step 5 : COPY entrypoint.sh *.py extractor_info.json /home/clowder/ build 08-Jul-2016 11:33:32 ---> Using cache build 08-Jul-2016 11:33:32 ---> 2c3079487a90 build 08-Jul-2016 11:33:32 Step 6 : ENTRYPOINT /home/clowder/entrypoint.sh build 08-Jul-2016 11:33:32 ---> Using cache build 08-Jul-2016 11:33:32 ---> 79e891d8df86 build 08-Jul-2016 11:33:32 Step 7 : CMD extractor build 08-Jul-2016 11:33:32 ---> Using cache build 08-Jul-2016 11:33:32 ---> 1791d5b711fb build 08-Jul-2016 11:33:32 Successfully built 1791d5b711fb build 08-Jul-2016 11:33:32 Untagged: 21777:latest simple 08-Jul-2016 11:33:32 Finished task 'docker build and push' with result: Success simple 08-Jul-2016 11:33:32 Running post build plugin 'Docker Container Cleanup' simple 08-Jul-2016 11:33:32 Running post build plugin 'NCover Results Collector' simple 08-Jul-2016 11:33:32 Running post build plugin 'Clover Results Collector' simple 08-Jul-2016 11:33:32 Running post build plugin 'npm Cache Cleanup' simple 08-Jul-2016 11:33:32 Running post build plugin 'Artifact Copier' simple 08-Jul-2016 11:33:32 Finalising the build... simple 08-Jul-2016 11:33:32 Stopping timer. simple 08-Jul-2016 11:33:32 Build CATS-PYC21-JOB1-1 completed. simple 08-Jul-2016 11:33:32 Running on server: post build plugin 'NCover Results Collector' simple 08-Jul-2016 11:33:32 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 08-Jul-2016 11:33:32 Running on server: post build plugin 'Clover Delta Calculator' simple 08-Jul-2016 11:33:32 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 08-Jul-2016 11:33:32 All post build plugins have finished simple 08-Jul-2016 11:33:32 Generating build results summary... simple 08-Jul-2016 11:33:32 Saving build results to disk... simple 08-Jul-2016 11:33:32 Logging substituted variables... simple 08-Jul-2016 11:33:32 Indexing build results... simple 08-Jul-2016 11:33:32 Finished building CATS-PYC21-JOB1-1.