simple 29-Jun-2017 13:34:09 Build Clowder - pyclowder2 - feature-GEOD-927-fix-add-test-for-pyclowder2-geostreams - Default Job #1 (CATS-PYC243-JOB1-1) started building on agent buildserver-2.os.ncsa.edu simple 29-Jun-2017 13:34:09 Remote agent on host buildserver-2.os.ncsa.edu simple 29-Jun-2017 13:34:09 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1 simple 29-Jun-2017 13:34:09 Executing build Clowder - pyclowder2 - feature-GEOD-927-fix-add-test-for-pyclowder2-geostreams - Default Job #1 (CATS-PYC243-JOB1-1) simple 29-Jun-2017 13:34:09 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 29-Jun-2017 13:34:09 Updating source code to revision: ab802376409ffef1763160f1681238cede3fb9ba simple 29-Jun-2017 13:34:09 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/.git'. simple 29-Jun-2017 13:34:09 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/.git/ simple 29-Jun-2017 13:34:09 Fetching 'refs/heads/feature/GEOD-927-fix-add-test-for-pyclowder2-geostreams' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git'. Will try to do a shallow fetch. simple 29-Jun-2017 13:34:09 Warning: Permanently added '[127.0.0.1]:40789' (RSA) to the list of known hosts. simple 29-Jun-2017 13:34:09 From ssh://127.0.0.1:40789/cats/pyclowder2 simple 29-Jun-2017 13:34:09 * [new branch] feature/GEOD-927-fix-add-test-for-pyclowder2-geostreams -> feature/GEOD-927-fix-add-test-for-pyclowder2-geostreams simple 29-Jun-2017 13:34:09 Checking out revision ab802376409ffef1763160f1681238cede3fb9ba. simple 29-Jun-2017 13:34:09 Switched to branch 'feature/GEOD-927-fix-add-test-for-pyclowder2-geostreams' simple 29-Jun-2017 13:34:09 Updated source code to revision: ab802376409ffef1763160f1681238cede3fb9ba simple 29-Jun-2017 13:34:09 Finished task 'Checkout Default Repository' with result: Success simple 29-Jun-2017 13:34:09 Running pre-build action: VCS Version Collector simple 29-Jun-2017 13:34:09 Starting task 'pytest' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 29-Jun-2017 13:34:09 Beginning to execute external process for build 'Clowder - pyclowder2 - feature-GEOD-927-fix-add-test-for-pyclowder2-geostreams - Default Job #1 (CATS-PYC243-JOB1-1)'\n ... running command line: \n/home/bamboo/bamboo-agent-home/temp/CATS-PYC243-JOB1-1-ScriptBuildTask-4265460558820102882.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1\n ... using extra environment variables: 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build 29-Jun-2017 13:34:11 New python executable in /tmp/virtualenv/pyclowder2/bin/python2 build 29-Jun-2017 13:34:11 Also creating executable in /tmp/virtualenv/pyclowder2/bin/python build 29-Jun-2017 13:34:14 Installing setuptools, pkg_resources, pip, wheel...done. build 29-Jun-2017 13:34:14 Running virtualenv with interpreter /usr/bin/python2 build 29-Jun-2017 13:34:14 Collecting enum34==1.1.6 (from -r requirements.txt (line 1)) build 29-Jun-2017 13:34:14 Using cached enum34-1.1.6-py2-none-any.whl build 29-Jun-2017 13:34:15 Collecting et-xmlfile==1.0.1 (from -r requirements.txt (line 2)) build 29-Jun-2017 13:34:15 Collecting jdcal==1.3 (from -r requirements.txt (line 3)) build 29-Jun-2017 13:34:15 Collecting openpyxl==2.4.1 (from -r requirements.txt (line 4)) build 29-Jun-2017 13:34:15 Collecting pika==0.10.0 (from -r requirements.txt (line 5)) build 29-Jun-2017 13:34:15 Using cached pika-0.10.0-py2.py3-none-any.whl build 29-Jun-2017 13:34:15 Collecting python-dateutil==2.6.0 (from -r requirements.txt (line 6)) build 29-Jun-2017 13:34:15 Using cached python_dateutil-2.6.0-py2.py3-none-any.whl build 29-Jun-2017 13:34:15 Collecting pytz==2016.10 (from -r requirements.txt (line 7)) build 29-Jun-2017 13:34:15 Using cached pytz-2016.10-py2.py3-none-any.whl build 29-Jun-2017 13:34:15 Collecting PyYAML==3.11 (from -r requirements.txt (line 8)) build 29-Jun-2017 13:34:16 Collecting requests==2.10.0 (from -r requirements.txt (line 9)) build 29-Jun-2017 13:34:16 Using cached requests-2.10.0-py2.py3-none-any.whl build 29-Jun-2017 13:34:16 Collecting six==1.10.0 (from -r requirements.txt (line 10)) build 29-Jun-2017 13:34:16 Using cached six-1.10.0-py2.py3-none-any.whl build 29-Jun-2017 13:34:16 Collecting wheel==0.24.0 (from -r requirements.txt (line 11)) build 29-Jun-2017 13:34:16 Using cached wheel-0.24.0-py2.py3-none-any.whl build 29-Jun-2017 13:34:16 Collecting pytest==3.0.3 (from -r requirements.txt (line 12)) build 29-Jun-2017 13:34:16 Using cached pytest-3.0.3-py2.py3-none-any.whl build 29-Jun-2017 13:34:16 Collecting pytest-pep8==1.0.6 (from -r requirements.txt (line 13)) build 29-Jun-2017 13:34:16 Collecting urllib3==1.14 (from -r requirements.txt (line 14)) build 29-Jun-2017 13:34:16 Using cached urllib3-1.14-py2.py3-none-any.whl build 29-Jun-2017 13:34:16 Collecting py>=1.4.29 (from pytest==3.0.3->-r requirements.txt (line 12)) build 29-Jun-2017 13:34:16 Using cached py-1.4.34-py2.py3-none-any.whl build 29-Jun-2017 13:34:16 Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r requirements.txt (line 13)) build 29-Jun-2017 13:34:16 Using cached pep8-1.7.0-py2.py3-none-any.whl build 29-Jun-2017 13:34:16 Collecting pytest-cache (from pytest-pep8==1.0.6->-r requirements.txt (line 13)) build 29-Jun-2017 13:34:17 Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 13)) build 29-Jun-2017 13:34:17 Using cached execnet-1.4.1-py2.py3-none-any.whl build 29-Jun-2017 13:34:17 Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 13)) build 29-Jun-2017 13:34:17 Using cached apipkg-1.4-py2.py3-none-any.whl build 29-Jun-2017 13:34:17 Installing collected packages: enum34, et-xmlfile, jdcal, openpyxl, pika, six, python-dateutil, pytz, PyYAML, requests, wheel, py, pytest, pep8, apipkg, execnet, pytest-cache, pytest-pep8, urllib3 build 29-Jun-2017 13:34:17 Found existing installation: wheel 0.30.0a0 build 29-Jun-2017 13:34:17 Uninstalling wheel-0.30.0a0: build 29-Jun-2017 13:34:17 Successfully uninstalled wheel-0.30.0a0 build 29-Jun-2017 13:34:18 Successfully installed PyYAML-3.11 apipkg-1.4 enum34-1.1.6 et-xmlfile-1.0.1 execnet-1.4.1 jdcal-1.3 openpyxl-2.4.1 pep8-1.7.0 pika-0.10.0 py-1.4.34 pytest-3.0.3 pytest-cache-1.0 pytest-pep8-1.0.6 python-dateutil-2.6.0 pytz-2016.10 requests-2.10.0 six-1.10.0 urllib3-1.14 wheel-0.24.0 build 29-Jun-2017 13:34:18 ============================= test session starts ============================== build 29-Jun-2017 13:34:18 platform linux2 -- Python 2.7.12, pytest-3.0.3, py-1.4.34, pluggy-0.4.0 build 29-Jun-2017 13:34:18 rootdir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1, inifile: setup.cfg build 29-Jun-2017 13:34:18 plugins: pep8-1.0.6 build 29-Jun-2017 13:34:18 collected 35 items build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 setup.py . build 29-Jun-2017 13:34:18 docs/source/conf.py F build 29-Jun-2017 13:34:18 pyclowder/__init__.py . build 29-Jun-2017 13:34:18 pyclowder/client.py F build 29-Jun-2017 13:34:18 pyclowder/collections.py . build 29-Jun-2017 13:34:18 pyclowder/connectors.py . build 29-Jun-2017 13:34:18 pyclowder/datasets.py . build 29-Jun-2017 13:34:18 pyclowder/extractors.py . build 29-Jun-2017 13:34:18 pyclowder/files.py . build 29-Jun-2017 13:34:18 pyclowder/geostreams.py . build 29-Jun-2017 13:34:18 pyclowder/sections.py . build 29-Jun-2017 13:34:18 pyclowder/utils.py . build 29-Jun-2017 13:34:18 pyclowder/geostreams/__init__.py . build 29-Jun-2017 13:34:18 pyclowder/geostreams/cache.py . build 29-Jun-2017 13:34:18 pyclowder/geostreams/csv.py . build 29-Jun-2017 13:34:18 pyclowder/geostreams/datapoints.py . build 29-Jun-2017 13:34:18 pyclowder/geostreams/datasets.py . build 29-Jun-2017 13:34:18 pyclowder/geostreams/map_names.py . build 29-Jun-2017 13:34:18 pyclowder/geostreams/sensors.py . build 29-Jun-2017 13:34:18 pyclowder/geostreams/streams.py . build 29-Jun-2017 13:34:18 pyclowder/geostreams/time_transformers.py . build 29-Jun-2017 13:34:18 sample-extractors/echo/echo.py . build 29-Jun-2017 13:34:18 sample-extractors/wordcount/wordcount.py . build 29-Jun-2017 13:34:18 tests/__init__.py . build 29-Jun-2017 13:34:18 tests/conftest.py F build 29-Jun-2017 13:34:18 tests/test_datapoints.py FE build 29-Jun-2017 13:34:18 tests/test_geostreams.py .EEE build 29-Jun-2017 13:34:18 tests/test_sensors.py .EEE build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 generated xml file: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/test-reports/results.xml build 29-Jun-2017 13:34:18 ==================================== ERRORS ==================================== build 29-Jun-2017 13:34:18 ____________ ERROR at setup of test_datapoints_count_by_sensor_get _____________ build 29-Jun-2017 13:34:18 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_datapoints.py, line 5 build 29-Jun-2017 13:34:18 def test_datapoints_count_by_sensor_get(caplog, host, key): build 29-Jun-2017 13:34:18 E fixture 'caplog' not found build 29-Jun-2017 13:34:18 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 29-Jun-2017 13:34:18 > use 'pytest --fixtures [testpath]' for help on them. build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_datapoints.py:5 build 29-Jun-2017 13:34:18 ________________________ ERROR at setup of test_version ________________________ build 29-Jun-2017 13:34:18 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_geostreams.py, line 7 build 29-Jun-2017 13:34:18 def test_version(caplog, host, key): build 29-Jun-2017 13:34:18 E fixture 'caplog' not found build 29-Jun-2017 13:34:18 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 29-Jun-2017 13:34:18 > use 'pytest --fixtures [testpath]' for help on them. build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_geostreams.py:7 build 29-Jun-2017 13:34:18 ______________________ ERROR at setup of test_get_sensors ______________________ build 29-Jun-2017 13:34:18 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_geostreams.py, line 15 build 29-Jun-2017 13:34:18 def test_get_sensors(caplog, host, key): build 29-Jun-2017 13:34:18 E fixture 'caplog' not found build 29-Jun-2017 13:34:18 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 29-Jun-2017 13:34:18 > use 'pytest --fixtures [testpath]' for help on them. build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_geostreams.py:15 build 29-Jun-2017 13:34:18 ___________________ ERROR at setup of test_raise_for_status ____________________ build 29-Jun-2017 13:34:18 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_geostreams.py, line 24 build 29-Jun-2017 13:34:18 def test_raise_for_status(caplog, host, key): build 29-Jun-2017 13:34:18 E fixture 'caplog' not found build 29-Jun-2017 13:34:18 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 29-Jun-2017 13:34:18 > use 'pytest --fixtures [testpath]' for help on them. build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_geostreams.py:24 build 29-Jun-2017 13:34:18 _____________________ ERROR at setup of test_sensors_post ______________________ build 29-Jun-2017 13:34:18 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_sensors.py, line 7 build 29-Jun-2017 13:34:18 def test_sensors_post(caplog, host, key): build 29-Jun-2017 13:34:18 E fixture 'caplog' not found build 29-Jun-2017 13:34:18 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 29-Jun-2017 13:34:18 > use 'pytest --fixtures [testpath]' for help on them. build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_sensors.py:7 build 29-Jun-2017 13:34:18 ______________________ ERROR at setup of test_sensors_get ______________________ build 29-Jun-2017 13:34:18 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_sensors.py, line 19 build 29-Jun-2017 13:34:18 def test_sensors_get(caplog, host, key): build 29-Jun-2017 13:34:18 E fixture 'caplog' not found build 29-Jun-2017 13:34:18 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 29-Jun-2017 13:34:18 > use 'pytest --fixtures [testpath]' for help on them. build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_sensors.py:19 build 29-Jun-2017 13:34:18 ____________________ ERROR at setup of test_sensors_delete _____________________ build 29-Jun-2017 13:34:18 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_sensors.py, line 29 build 29-Jun-2017 13:34:18 def test_sensors_delete(caplog, host, key): build 29-Jun-2017 13:34:18 E fixture 'caplog' not found build 29-Jun-2017 13:34:18 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 29-Jun-2017 13:34:18 > use 'pytest --fixtures [testpath]' for help on them. build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_sensors.py:29 build 29-Jun-2017 13:34:18 =================================== FAILURES =================================== build 29-Jun-2017 13:34:18 __________________________________ PEP8-check __________________________________ build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/docs/source/conf.py:34:5: E128 continuation line under-indented for visual indent build 29-Jun-2017 13:34:18 'sphinx.ext.doctest', build 29-Jun-2017 13:34:18 ^ build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/docs/source/conf.py:35:5: E128 continuation line under-indented for visual indent build 29-Jun-2017 13:34:18 'sphinx.ext.viewcode', build 29-Jun-2017 13:34:18 ^ build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/docs/source/conf.py:36:5: E128 continuation line under-indented for visual indent build 29-Jun-2017 13:34:18 'sphinx.ext.githubpages'] build 29-Jun-2017 13:34:18 ^ build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/docs/source/conf.py:159:1: W391 blank line at end of file build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 ^ build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 __________________________________ PEP8-check __________________________________ build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/pyclowder/client.py:145:121: E501 line too long (137 > 120 characters) build 29-Jun-2017 13:34:18 return requests.post(url, params=params, data=json.dumps(content), headers=self.headers, auth=(self.username, self.password)) build 29-Jun-2017 13:34:18 ^ build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/pyclowder/client.py:163:121: E501 line too long (127 > 120 characters) build 29-Jun-2017 13:34:18 return requests.post(url, params=params, files={"File": open(filename, 'rb')}, auth=(self.username, self.password)) build 29-Jun-2017 13:34:18 ^ build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 __________________________________ PEP8-check __________________________________ build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/conftest.py:14:1: E302 expected 2 blank lines, found 1 build 29-Jun-2017 13:34:18 @pytest.fixture(scope="module") build 29-Jun-2017 13:34:18 ^ build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 __________________________________ PEP8-check __________________________________ build 29-Jun-2017 13:34:18 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1/tests/test_datapoints.py:11:39: W292 no newline at end of file build 29-Jun-2017 13:34:18 assert response.status_code != 200 build 29-Jun-2017 13:34:18 ^ build 29-Jun-2017 13:34:18 build 29-Jun-2017 13:34:18 ================= 4 failed, 24 passed, 7 error in 0.48 seconds ================= simple 29-Jun-2017 13:34:18 Failing task since return code of [/home/bamboo/bamboo-agent-home/temp/CATS-PYC243-JOB1-1-ScriptBuildTask-4265460558820102882.sh] was 1 while expected 0 simple 29-Jun-2017 13:34:18 Finished task 'pytest' with result: Failed simple 29-Jun-2017 13:34:18 Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit' simple 29-Jun-2017 13:34:18 Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC243-JOB1... simple 29-Jun-2017 13:34:19 Failing task since 11 failing test cases were found. simple 29-Jun-2017 13:34:19 Finished task 'test results' with result: Failed simple 29-Jun-2017 13:34:19 Running post build plugin 'Docker Container Cleanup' simple 29-Jun-2017 13:34:19 Running post build plugin 'NCover Results Collector' simple 29-Jun-2017 13:34:19 Running post build plugin 'Clover Results Collector' simple 29-Jun-2017 13:34:19 Running post build plugin 'npm Cache Cleanup' simple 29-Jun-2017 13:34:19 Running post build plugin 'Artifact Copier' simple 29-Jun-2017 13:34:19 Finalising the build... simple 29-Jun-2017 13:34:19 Stopping timer. simple 29-Jun-2017 13:34:19 Build CATS-PYC243-JOB1-1 completed. simple 29-Jun-2017 13:34:19 Running on server: post build plugin 'NCover Results Collector' simple 29-Jun-2017 13:34:19 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 29-Jun-2017 13:34:19 Running on server: post build plugin 'Clover Delta Calculator' simple 29-Jun-2017 13:34:19 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 29-Jun-2017 13:34:19 All post build plugins have finished simple 29-Jun-2017 13:34:19 Generating build results summary... simple 29-Jun-2017 13:34:19 Saving build results to disk... simple 29-Jun-2017 13:34:19 Logging substituted variables... simple 29-Jun-2017 13:34:19 Indexing build results... simple 29-Jun-2017 13:34:19 Finished building CATS-PYC243-JOB1-1.