simple 08-Jun-2017 11:47:52 Build Clowder - pyclowder2 - geostreams - Default Job #18 (CATS-PYC26-JOB1-18) started building on agent buildserver-2.os.ncsa.edu simple 08-Jun-2017 11:47:52 Remote agent on host buildserver-2.os.ncsa.edu simple 08-Jun-2017 11:47:52 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1 simple 08-Jun-2017 11:47:52 Executing build Clowder - pyclowder2 - geostreams - Default Job #18 (CATS-PYC26-JOB1-18) simple 08-Jun-2017 11:47:52 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 08-Jun-2017 11:47:52 Updating source code to revision: 915e0fcbd8ce83994bcb39086853a2f004f2f5d1 simple 08-Jun-2017 11:47:52 Fetching 'refs/heads/geostreams' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git'. Will try to do a shallow fetch. simple 08-Jun-2017 11:47:52 Warning: Permanently added '[127.0.0.1]:34662' (RSA) to the list of known hosts. simple 08-Jun-2017 11:47:52 From ssh://127.0.0.1:34662/cats/pyclowder2 simple 08-Jun-2017 11:47:52 + 194d035...915e0fc geostreams -> geostreams (forced update) simple 08-Jun-2017 11:47:52 Checking out revision 915e0fcbd8ce83994bcb39086853a2f004f2f5d1. simple 08-Jun-2017 11:47:52 Already on 'geostreams' simple 08-Jun-2017 11:47:52 Updated source code to revision: 915e0fcbd8ce83994bcb39086853a2f004f2f5d1 simple 08-Jun-2017 11:47:52 Finished task 'Checkout Default Repository' with result: Success simple 08-Jun-2017 11:47:52 Running pre-build action: VCS Version Collector simple 08-Jun-2017 11:47:52 Starting task 'pytest' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 08-Jun-2017 11:47:52 Beginning to execute external process for build 'Clowder - pyclowder2 - geostreams - Default Job #18 (CATS-PYC26-JOB1-18)'\n ... running command line: \n/home/bamboo/bamboo-agent-home/temp/CATS-PYC26-JOB1-18-ScriptBuildTask-1293190049911480678.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1\n ... using extra environment variables: 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build 08-Jun-2017 11:47:52 New python executable in /tmp/virtualenv/pyclowder2/bin/python2 build 08-Jun-2017 11:47:52 Also creating executable in /tmp/virtualenv/pyclowder2/bin/python build 08-Jun-2017 11:47:55 Installing setuptools, pkg_resources, pip, wheel...done. build 08-Jun-2017 11:47:55 Running virtualenv with interpreter /usr/bin/python2 build 08-Jun-2017 11:47:56 Collecting enum34==1.1.6 (from -r requirements.txt (line 1)) build 08-Jun-2017 11:47:56 Using cached enum34-1.1.6-py2-none-any.whl build 08-Jun-2017 11:47:56 Collecting et-xmlfile==1.0.1 (from -r requirements.txt (line 2)) build 08-Jun-2017 11:47:56 Collecting jdcal==1.3 (from -r requirements.txt (line 3)) build 08-Jun-2017 11:47:56 Collecting openpyxl==2.4.1 (from -r requirements.txt (line 4)) build 08-Jun-2017 11:47:56 Collecting pika==0.10.0 (from -r requirements.txt (line 5)) build 08-Jun-2017 11:47:56 Using cached pika-0.10.0-py2.py3-none-any.whl build 08-Jun-2017 11:47:56 Collecting python-dateutil==2.6.0 (from -r requirements.txt (line 6)) build 08-Jun-2017 11:47:57 Using cached python_dateutil-2.6.0-py2.py3-none-any.whl build 08-Jun-2017 11:47:57 Collecting pytz==2016.10 (from -r requirements.txt (line 7)) build 08-Jun-2017 11:47:57 Using cached pytz-2016.10-py2.py3-none-any.whl build 08-Jun-2017 11:47:57 Collecting PyYAML==3.11 (from -r requirements.txt (line 8)) build 08-Jun-2017 11:47:57 Collecting requests==2.10.0 (from -r requirements.txt (line 9)) build 08-Jun-2017 11:47:57 Using cached requests-2.10.0-py2.py3-none-any.whl build 08-Jun-2017 11:47:57 Collecting six==1.10.0 (from -r requirements.txt (line 10)) build 08-Jun-2017 11:47:57 Using cached six-1.10.0-py2.py3-none-any.whl build 08-Jun-2017 11:47:57 Collecting wheel==0.24.0 (from -r requirements.txt (line 11)) build 08-Jun-2017 11:47:57 Using cached wheel-0.24.0-py2.py3-none-any.whl build 08-Jun-2017 11:47:57 Collecting pytest==3.0.3 (from -r requirements.txt (line 12)) build 08-Jun-2017 11:47:58 Using cached pytest-3.0.3-py2.py3-none-any.whl build 08-Jun-2017 11:47:58 Collecting pytest-pep8==1.0.6 (from -r requirements.txt (line 13)) build 08-Jun-2017 11:47:58 Collecting urllib3==1.14 (from -r requirements.txt (line 14)) build 08-Jun-2017 11:47:58 Using cached urllib3-1.14-py2.py3-none-any.whl build 08-Jun-2017 11:47:58 Collecting py>=1.4.29 (from pytest==3.0.3->-r requirements.txt (line 12)) build 08-Jun-2017 11:47:58 Using cached py-1.4.34-py2.py3-none-any.whl build 08-Jun-2017 11:47:58 Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r requirements.txt (line 13)) build 08-Jun-2017 11:47:58 Using cached pep8-1.7.0-py2.py3-none-any.whl build 08-Jun-2017 11:47:58 Collecting pytest-cache (from pytest-pep8==1.0.6->-r requirements.txt (line 13)) build 08-Jun-2017 11:47:58 Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 13)) build 08-Jun-2017 11:47:58 Using cached execnet-1.4.1-py2.py3-none-any.whl build 08-Jun-2017 11:47:58 Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 13)) build 08-Jun-2017 11:47:58 Using cached apipkg-1.4-py2.py3-none-any.whl build 08-Jun-2017 11:47:58 Installing collected packages: enum34, et-xmlfile, jdcal, openpyxl, pika, six, python-dateutil, pytz, PyYAML, requests, wheel, py, pytest, pep8, apipkg, execnet, pytest-cache, pytest-pep8, urllib3 build 08-Jun-2017 11:47:59 Found existing installation: wheel 0.30.0a0 build 08-Jun-2017 11:47:59 Uninstalling wheel-0.30.0a0: build 08-Jun-2017 11:47:59 Successfully uninstalled wheel-0.30.0a0 build 08-Jun-2017 11:47:59 Successfully installed PyYAML-3.11 apipkg-1.4 enum34-1.1.6 et-xmlfile-1.0.1 execnet-1.4.1 jdcal-1.3 openpyxl-2.4.1 pep8-1.7.0 pika-0.10.0 py-1.4.34 pytest-3.0.3 pytest-cache-1.0 pytest-pep8-1.0.6 python-dateutil-2.6.0 pytz-2016.10 requests-2.10.0 six-1.10.0 urllib3-1.14 wheel-0.24.0 build 08-Jun-2017 11:48:00 ============================= test session starts ============================== build 08-Jun-2017 11:48:00 platform linux2 -- Python 2.7.12, pytest-3.0.3, py-1.4.34, pluggy-0.4.0 build 08-Jun-2017 11:48:00 rootdir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1, inifile: setup.cfg build 08-Jun-2017 11:48:00 plugins: pep8-1.0.6 build 08-Jun-2017 11:48:00 collected 35 items build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 setup.py . build 08-Jun-2017 11:48:00 docs/source/conf.py F build 08-Jun-2017 11:48:00 pyclowder/__init__.py . build 08-Jun-2017 11:48:00 pyclowder/client.py F build 08-Jun-2017 11:48:00 pyclowder/collections.py . build 08-Jun-2017 11:48:00 pyclowder/connectors.py . build 08-Jun-2017 11:48:00 pyclowder/datasets.py . build 08-Jun-2017 11:48:00 pyclowder/extractors.py . build 08-Jun-2017 11:48:00 pyclowder/files.py . build 08-Jun-2017 11:48:00 pyclowder/geostreams.py . build 08-Jun-2017 11:48:00 pyclowder/sections.py . build 08-Jun-2017 11:48:00 pyclowder/utils.py . build 08-Jun-2017 11:48:00 pyclowder/geostreams/__init__.py . build 08-Jun-2017 11:48:00 pyclowder/geostreams/cache.py . build 08-Jun-2017 11:48:00 pyclowder/geostreams/csv.py . build 08-Jun-2017 11:48:00 pyclowder/geostreams/datapoints.py . build 08-Jun-2017 11:48:00 pyclowder/geostreams/datasets.py . build 08-Jun-2017 11:48:00 pyclowder/geostreams/map_names.py . build 08-Jun-2017 11:48:00 pyclowder/geostreams/sensors.py . build 08-Jun-2017 11:48:00 pyclowder/geostreams/streams.py . build 08-Jun-2017 11:48:00 pyclowder/geostreams/time_transformers.py . build 08-Jun-2017 11:48:00 sample-extractors/echo/echo.py . build 08-Jun-2017 11:48:00 sample-extractors/wordcount/wordcount.py . build 08-Jun-2017 11:48:00 tests/__init__.py . build 08-Jun-2017 11:48:00 tests/conftest.py F build 08-Jun-2017 11:48:00 tests/test_datapoints.py FE build 08-Jun-2017 11:48:00 tests/test_geostreams.py .EEE build 08-Jun-2017 11:48:00 tests/test_sensors.py .EEE build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 generated xml file: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/test-reports/results.xml build 08-Jun-2017 11:48:00 ==================================== ERRORS ==================================== build 08-Jun-2017 11:48:00 ____________ ERROR at setup of test_datapoints_count_by_sensor_get _____________ build 08-Jun-2017 11:48:00 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_datapoints.py, line 5 build 08-Jun-2017 11:48:00 def test_datapoints_count_by_sensor_get(caplog, host, key): build 08-Jun-2017 11:48:00 E fixture 'caplog' not found build 08-Jun-2017 11:48:00 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 08-Jun-2017 11:48:00 > use 'pytest --fixtures [testpath]' for help on them. build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_datapoints.py:5 build 08-Jun-2017 11:48:00 ________________________ ERROR at setup of test_version ________________________ build 08-Jun-2017 11:48:00 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_geostreams.py, line 7 build 08-Jun-2017 11:48:00 def test_version(caplog, host, key): build 08-Jun-2017 11:48:00 E fixture 'caplog' not found build 08-Jun-2017 11:48:00 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 08-Jun-2017 11:48:00 > use 'pytest --fixtures [testpath]' for help on them. build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_geostreams.py:7 build 08-Jun-2017 11:48:00 ______________________ ERROR at setup of test_get_sensors ______________________ build 08-Jun-2017 11:48:00 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_geostreams.py, line 15 build 08-Jun-2017 11:48:00 def test_get_sensors(caplog, host, key): build 08-Jun-2017 11:48:00 E fixture 'caplog' not found build 08-Jun-2017 11:48:00 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 08-Jun-2017 11:48:00 > use 'pytest --fixtures [testpath]' for help on them. build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_geostreams.py:15 build 08-Jun-2017 11:48:00 ___________________ ERROR at setup of test_raise_for_status ____________________ build 08-Jun-2017 11:48:00 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_geostreams.py, line 24 build 08-Jun-2017 11:48:00 def test_raise_for_status(caplog, host, key): build 08-Jun-2017 11:48:00 E fixture 'caplog' not found build 08-Jun-2017 11:48:00 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 08-Jun-2017 11:48:00 > use 'pytest --fixtures [testpath]' for help on them. build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_geostreams.py:24 build 08-Jun-2017 11:48:00 _____________________ ERROR at setup of test_sensors_post ______________________ build 08-Jun-2017 11:48:00 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_sensors.py, line 7 build 08-Jun-2017 11:48:00 def test_sensors_post(caplog, host, key): build 08-Jun-2017 11:48:00 E fixture 'caplog' not found build 08-Jun-2017 11:48:00 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 08-Jun-2017 11:48:00 > use 'pytest --fixtures [testpath]' for help on them. build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_sensors.py:7 build 08-Jun-2017 11:48:00 ______________________ ERROR at setup of test_sensors_get ______________________ build 08-Jun-2017 11:48:00 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_sensors.py, line 19 build 08-Jun-2017 11:48:00 def test_sensors_get(caplog, host, key): build 08-Jun-2017 11:48:00 E fixture 'caplog' not found build 08-Jun-2017 11:48:00 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 08-Jun-2017 11:48:00 > use 'pytest --fixtures [testpath]' for help on them. build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_sensors.py:19 build 08-Jun-2017 11:48:00 ____________________ ERROR at setup of test_sensors_delete _____________________ build 08-Jun-2017 11:48:00 file /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_sensors.py, line 29 build 08-Jun-2017 11:48:00 def test_sensors_delete(caplog, host, key): build 08-Jun-2017 11:48:00 E fixture 'caplog' not found build 08-Jun-2017 11:48:00 > available fixtures: cache, capfd, capsys, doctest_namespace, host, key, monkeypatch, password, pytestconfig, record_xml_property, recwarn, tmpdir, tmpdir_factory, username build 08-Jun-2017 11:48:00 > use 'pytest --fixtures [testpath]' for help on them. build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_sensors.py:29 build 08-Jun-2017 11:48:00 =================================== FAILURES =================================== build 08-Jun-2017 11:48:00 __________________________________ PEP8-check __________________________________ build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/docs/source/conf.py:34:5: E128 continuation line under-indented for visual indent build 08-Jun-2017 11:48:00 'sphinx.ext.doctest', build 08-Jun-2017 11:48:00 ^ build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/docs/source/conf.py:35:5: E128 continuation line under-indented for visual indent build 08-Jun-2017 11:48:00 'sphinx.ext.viewcode', build 08-Jun-2017 11:48:00 ^ build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/docs/source/conf.py:36:5: E128 continuation line under-indented for visual indent build 08-Jun-2017 11:48:00 'sphinx.ext.githubpages'] build 08-Jun-2017 11:48:00 ^ build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/docs/source/conf.py:159:1: W391 blank line at end of file build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 ^ build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 __________________________________ PEP8-check __________________________________ build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/pyclowder/client.py:145:121: E501 line too long (137 > 120 characters) build 08-Jun-2017 11:48:00 return requests.post(url, params=params, data=json.dumps(content), headers=self.headers, auth=(self.username, self.password)) build 08-Jun-2017 11:48:00 ^ build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/pyclowder/client.py:163:121: E501 line too long (127 > 120 characters) build 08-Jun-2017 11:48:00 return requests.post(url, params=params, files={"File": open(filename, 'rb')}, auth=(self.username, self.password)) build 08-Jun-2017 11:48:00 ^ build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/pyclowder/client.py:196:5: E303 too many blank lines (2) build 08-Jun-2017 11:48:00 def delete(self, path): build 08-Jun-2017 11:48:00 ^ build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/pyclowder/client.py:199:1: W293 blank line contains whitespace build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 ^ build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 __________________________________ PEP8-check __________________________________ build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/conftest.py:14:1: E302 expected 2 blank lines, found 1 build 08-Jun-2017 11:48:00 @pytest.fixture(scope="module") build 08-Jun-2017 11:48:00 ^ build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 __________________________________ PEP8-check __________________________________ build 08-Jun-2017 11:48:00 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1/tests/test_datapoints.py:11:39: W292 no newline at end of file build 08-Jun-2017 11:48:00 assert response.status_code != 200 build 08-Jun-2017 11:48:00 ^ build 08-Jun-2017 11:48:00 build 08-Jun-2017 11:48:00 ================= 4 failed, 24 passed, 7 error in 0.44 seconds ================= simple 08-Jun-2017 11:48:00 Failing task since return code of [/home/bamboo/bamboo-agent-home/temp/CATS-PYC26-JOB1-18-ScriptBuildTask-1293190049911480678.sh] was 1 while expected 0 simple 08-Jun-2017 11:48:00 Finished task 'pytest' with result: Failed simple 08-Jun-2017 11:48:00 Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit' simple 08-Jun-2017 11:48:00 Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC26-JOB1... simple 08-Jun-2017 11:48:00 Failing task since 11 failing test cases were found. simple 08-Jun-2017 11:48:00 Finished task 'test results' with result: Failed simple 08-Jun-2017 11:48:00 Running post build plugin 'Docker Container Cleanup' simple 08-Jun-2017 11:48:00 Running post build plugin 'NCover Results Collector' simple 08-Jun-2017 11:48:00 Running post build plugin 'Clover Results Collector' simple 08-Jun-2017 11:48:00 Running post build plugin 'npm Cache Cleanup' simple 08-Jun-2017 11:48:00 Running post build plugin 'Artifact Copier' simple 08-Jun-2017 11:48:00 Finalising the build... simple 08-Jun-2017 11:48:00 Stopping timer. simple 08-Jun-2017 11:48:00 Build CATS-PYC26-JOB1-18 completed. simple 08-Jun-2017 11:48:00 Running on server: post build plugin 'NCover Results Collector' simple 08-Jun-2017 11:48:00 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 08-Jun-2017 11:48:00 Running on server: post build plugin 'Clover Delta Calculator' simple 08-Jun-2017 11:48:00 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 08-Jun-2017 11:48:00 All post build plugins have finished simple 08-Jun-2017 11:48:00 Generating build results summary... simple 08-Jun-2017 11:48:00 Saving build results to disk... simple 08-Jun-2017 11:48:00 Logging substituted variables... simple 08-Jun-2017 11:48:00 Indexing build results... simple 08-Jun-2017 11:48:00 Finished building CATS-PYC26-JOB1-18.