simple	22-May-2019 13:46:09	Build Clowder - pyclowder2 - clowder-clients-clean - Default Job #19 (CATS-PYC267-JOB1-19) started building on agent buildserver-3.os.ncsa.edu
simple	22-May-2019 13:46:09	Remote agent on host buildserver-3.os.ncsa.edu
simple	22-May-2019 13:46:09	Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1
simple	22-May-2019 13:46:09	Executing build Clowder - pyclowder2 - clowder-clients-clean - Default Job #19 (CATS-PYC267-JOB1-19)
simple	22-May-2019 13:46:09	Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
simple	22-May-2019 13:46:09	Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1
simple	22-May-2019 13:46:09	Updating source code to revision: 44a25ac14e21f81c56eea5a8eaff43dbba852ab8
simple	22-May-2019 13:46:09	Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1/.git'.
simple	22-May-2019 13:46:09	Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1/.git/
simple	22-May-2019 13:46:09	Fetching 'refs/heads/clowder-clients-clean' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git'. Will try to do a shallow fetch.
simple	22-May-2019 13:46:10	Warning: Permanently added '[127.0.0.1]:45810' (RSA) to the list of known hosts.
simple	22-May-2019 13:46:10	From ssh://127.0.0.1:45810/cats/pyclowder2
simple	22-May-2019 13:46:10	 * [new branch]      clowder-clients-clean -> clowder-clients-clean
simple	22-May-2019 13:46:10	Checking out revision 44a25ac14e21f81c56eea5a8eaff43dbba852ab8.
simple	22-May-2019 13:46:10	Switched to branch 'clowder-clients-clean'
simple	22-May-2019 13:46:10	Updated source code to revision: 44a25ac14e21f81c56eea5a8eaff43dbba852ab8
simple	22-May-2019 13:46:10	Finished task 'Checkout Default Repository' with result: Success
simple	22-May-2019 13:46:10	Running pre-build action: VCS Version Collector
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build	22-May-2019 13:46:10	New python executable in /tmp/virtualenv/pyclowder2-p2/bin/python2
build	22-May-2019 13:46:10	Also creating executable in /tmp/virtualenv/pyclowder2-p2/bin/python
build	22-May-2019 13:46:12	Installing setuptools, pkg_resources, pip, wheel...done.
build	22-May-2019 13:46:12	Running virtualenv with interpreter /usr/bin/python2
error	22-May-2019 13:46:13	DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7.
build	22-May-2019 13:46:13	Collecting enum34==1.1.6 (from -r requirements.txt (line 1))
build	22-May-2019 13:46:13	  Using cached https://files.pythonhosted.org/packages/c5/db/e56e6b4bbac7c4a06de1c50de6fe1ef3810018ae11732a50f15f62c7d050/enum34-1.1.6-py2-none-any.whl
build	22-May-2019 13:46:13	Collecting pika==1.0.0 (from -r requirements.txt (line 2))
build	22-May-2019 13:46:13	  Using cached https://files.pythonhosted.org/packages/53/a4/5aff2293e1cdcf5f77447ebdfeaac99b622aef7d1e723cf9a5fe317b077c/pika-1.0.0-py2.py3-none-any.whl
build	22-May-2019 13:46:13	Collecting PyYAML==5.1 (from -r requirements.txt (line 3))
build	22-May-2019 13:46:13	Collecting requests==2.21.0 (from -r requirements.txt (line 4))
build	22-May-2019 13:46:13	  Using cached https://files.pythonhosted.org/packages/7d/e3/20f3d364d6c8e5d2353c72a67778eb189176f08e873c9900e10c0287b84b/requests-2.21.0-py2.py3-none-any.whl
build	22-May-2019 13:46:13	Collecting wheel==0.33.1 (from -r requirements.txt (line 5))
build	22-May-2019 13:46:13	  Using cached https://files.pythonhosted.org/packages/96/ba/a4702cbb6a3a485239fbe9525443446203f00771af9ac000fa3ef2788201/wheel-0.33.1-py2.py3-none-any.whl
build	22-May-2019 13:46:13	Collecting urllib3==1.24.1 (from -r requirements.txt (line 6))
build	22-May-2019 13:46:13	  Using cached https://files.pythonhosted.org/packages/62/00/ee1d7de624db8ba7090d1226aebefab96a2c71cd5cfa7629d6ad3f61b79e/urllib3-1.24.1-py2.py3-none-any.whl
build	22-May-2019 13:46:13	Collecting pytest==4.3.1 (from -r requirements.txt (line 7))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/c8/52/c455e718f19e4fd7126c81b4910ca2431ded6c28b97e36a1a1f5e5ef7247/pytest-4.3.1-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting pytest-pep8==1.0.6 (from -r requirements.txt (line 8))
build	22-May-2019 13:46:14	Collecting certifi>=2017.4.17 (from requests==2.21.0->-r requirements.txt (line 4))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/60/75/f692a584e85b7eaba0e03827b3d51f45f571c2e793dd731e598828d380aa/certifi-2019.3.9-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting chardet<3.1.0,>=3.0.2 (from requests==2.21.0->-r requirements.txt (line 4))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/bc/a9/01ffebfb562e4274b6487b4bb1ddec7ca55ec7510b22e4c51f14098443b8/chardet-3.0.4-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting idna<2.9,>=2.5 (from requests==2.21.0->-r requirements.txt (line 4))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/14/2c/cd551d81dbe15200be1cf41cd03869a46fe7226e7450af7a6545bfc474c9/idna-2.8-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting atomicwrites>=1.0 (from pytest==4.3.1->-r requirements.txt (line 7))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/52/90/6155aa926f43f2b2a22b01be7241be3bfd1ceaf7d0b3267213e8127d41f4/atomicwrites-1.3.0-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting py>=1.5.0 (from pytest==4.3.1->-r requirements.txt (line 7))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/76/bc/394ad449851729244a97857ee14d7cba61ddb268dce3db538ba2f2ba1f0f/py-1.8.0-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Requirement already satisfied: setuptools in /tmp/virtualenv/pyclowder2-p2/lib/python2.7/site-packages (from pytest==4.3.1->-r requirements.txt (line 7)) (41.0.1)
build	22-May-2019 13:46:14	Collecting six>=1.10.0 (from pytest==4.3.1->-r requirements.txt (line 7))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/73/fb/00a976f728d0d1fecfe898238ce23f502a721c0ac0ecfedb80e0d88c64e9/six-1.12.0-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting pathlib2>=2.2.0; python_version < "3.6" (from pytest==4.3.1->-r requirements.txt (line 7))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/2a/46/c696dcf1c7aad917b39b875acdc5451975e3a9b4890dca8329983201c97a/pathlib2-2.3.3-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting pluggy>=0.7 (from pytest==4.3.1->-r requirements.txt (line 7))
build	22-May-2019 13:46:14	  Downloading https://files.pythonhosted.org/packages/cc/e4/2003a5e4e445424602c8f06a436eeed9e78bcae4947128f64741c66c7216/pluggy-0.11.0-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting attrs>=17.4.0 (from pytest==4.3.1->-r requirements.txt (line 7))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/23/96/d828354fa2dbdf216eaa7b7de0db692f12c234f7ef888cc14980ef40d1d2/attrs-19.1.0-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting more-itertools<6.0.0,>=4.0.0; python_version <= "2.7" (from pytest==4.3.1->-r requirements.txt (line 7))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/2f/9d/dcfe59e213093695f108508af1214cf9cd95cc5489e46877ec5cb56369e5/more_itertools-5.0.0-py2-none-any.whl
build	22-May-2019 13:46:14	Collecting funcsigs; python_version < "3.0" (from pytest==4.3.1->-r requirements.txt (line 7))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/69/cb/f5be453359271714c01b9bd06126eaf2e368f1fddfff30818754b5ac2328/funcsigs-1.0.2-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r requirements.txt (line 8))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/42/3f/669429ce58de2c22d8d2c542752e137ec4b9885fff398d3eceb1a7f5acb4/pep8-1.7.1-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting pytest-cache (from pytest-pep8==1.0.6->-r requirements.txt (line 8))
build	22-May-2019 13:46:14	Collecting scandir; python_version < "3.5" (from pathlib2>=2.2.0; python_version < "3.6"->pytest==4.3.1->-r requirements.txt (line 7))
build	22-May-2019 13:46:14	Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 8))
build	22-May-2019 13:46:14	  Using cached https://files.pythonhosted.org/packages/77/1a/f69e1f73bc36f55d3273afd1c52936def71ac67d9c5215be3a4ca3a45577/execnet-1.6.0-py2.py3-none-any.whl
build	22-May-2019 13:46:14	Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 8))
build	22-May-2019 13:46:15	  Using cached https://files.pythonhosted.org/packages/67/08/4815a09603fc800209431bec5b8bd2acf2f95abdfb558a44a42507fb94da/apipkg-1.5-py2.py3-none-any.whl
build	22-May-2019 13:46:15	Installing collected packages: enum34, pika, PyYAML, certifi, chardet, idna, urllib3, requests, wheel, atomicwrites, py, six, scandir, pathlib2, pluggy, attrs, more-itertools, funcsigs, pytest, pep8, apipkg, execnet, pytest-cache, pytest-pep8
build	22-May-2019 13:46:15	  Found existing installation: wheel 0.33.4
build	22-May-2019 13:46:15	    Uninstalling wheel-0.33.4:
build	22-May-2019 13:46:15	      Successfully uninstalled wheel-0.33.4
build	22-May-2019 13:46:15	Successfully installed PyYAML-5.1 apipkg-1.5 atomicwrites-1.3.0 attrs-19.1.0 certifi-2019.3.9 chardet-3.0.4 enum34-1.1.6 execnet-1.6.0 funcsigs-1.0.2 idna-2.8 more-itertools-5.0.0 pathlib2-2.3.3 pep8-1.7.1 pika-1.0.0 pluggy-0.11.0 py-1.8.0 pytest-4.3.1 pytest-cache-1.0 pytest-pep8-1.0.6 requests-2.21.0 scandir-1.10.0 six-1.12.0 urllib3-1.24.1 wheel-0.33.1
build	22-May-2019 13:46:16	============================= test session starts ==============================
build	22-May-2019 13:46:16	platform linux2 -- Python 2.7.12, pytest-4.3.1, py-1.8.0, pluggy-0.11.0
build	22-May-2019 13:46:16	rootdir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1, inifile: setup.cfg
build	22-May-2019 13:46:16	plugins: pep8-1.0.6
build	22-May-2019 13:46:16	collected 20 items
build	22-May-2019 13:46:16	
build	22-May-2019 13:46:16	setup.py .
build	22-May-2019 13:46:16	contrib/monitor/monitor.py .
build	22-May-2019 13:46:16	docs/source/conf.py .
build	22-May-2019 13:46:16	pyclowder/__init__.py .
build	22-May-2019 13:46:16	pyclowder/client.py .
build	22-May-2019 13:46:16	pyclowder/collections.py .
build	22-May-2019 13:46:16	pyclowder/connectors.py .
build	22-May-2019 13:46:16	pyclowder/datasets.py .
build	22-May-2019 13:46:16	pyclowder/extractors.py .
build	22-May-2019 13:46:16	pyclowder/files.py F
build	22-May-2019 13:46:16	pyclowder/geostreams.py .
build	22-May-2019 13:46:16	pyclowder/sections.py .
build	22-May-2019 13:46:16	pyclowder/utils.py .
build	22-May-2019 13:46:17	sample-extractors/binary-preview/binary_extractor.py .
build	22-May-2019 13:46:17	sample-extractors/echo/echo.py .
build	22-May-2019 13:46:17	sample-extractors/simple-extractor/simple_extractor.py .
build	22-May-2019 13:46:17	sample-extractors/simple-r-extractor/r_extractor.py .
build	22-May-2019 13:46:17	sample-extractors/wordcount/wordcount.py .
build	22-May-2019 13:46:17	sample-extractors/wordcount-simple-extractor/wordcount.py .
build	22-May-2019 13:46:17	tests/clientTest.py .
build	22-May-2019 13:46:17	
build	22-May-2019 13:46:17	=================================== FAILURES ===================================
build	22-May-2019 13:46:17	__________________________________ PEP8-check __________________________________
build	22-May-2019 13:46:17	/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1/pyclowder/files.py:32:1: E302 expected 2 blank lines, found 1
build	22-May-2019 13:46:17	class FilesApi(object):
build	22-May-2019 13:46:17	^
build	22-May-2019 13:46:17	
build	22-May-2019 13:46:17	- generated xml file: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1/test-reports/results-p2.xml -
build	22-May-2019 13:46:17	===================== 1 failed, 19 passed in 0.42 seconds ======================
simple	22-May-2019 13:46:17	Failing task since return code of [/home/bamboo/bamboo-agent-home/temp/CATS-PYC267-JOB1-19-ScriptBuildTask-1426956841797595978.sh] was 1 while expected 0
simple	22-May-2019 13:46:17	Finished task 'python 2 - pytest' with result: Failed
simple	22-May-2019 13:46:17	Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit'
simple	22-May-2019 13:46:17	Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1...
simple	22-May-2019 13:46:17	Failing task since 1 failing test cases were found.
simple	22-May-2019 13:46:17	Finished task 'test results' with result: Failed
simple	22-May-2019 13:46:17	Running post build plugin 'Docker Container Cleanup'
simple	22-May-2019 13:46:17	Running post build plugin 'NCover Results Collector'
simple	22-May-2019 13:46:17	Running post build plugin 'Clover Results Collector'
simple	22-May-2019 13:46:17	Running post build plugin 'npm Cache Cleanup'
simple	22-May-2019 13:46:17	Running post build plugin 'Artifact Copier'
simple	22-May-2019 13:46:17	Finalising the build...
simple	22-May-2019 13:46:17	Stopping timer.
simple	22-May-2019 13:46:17	Build CATS-PYC267-JOB1-19 completed.
simple	22-May-2019 13:46:17	Running on server: post build plugin 'NCover Results Collector'
simple	22-May-2019 13:46:17	Running on server: post build plugin 'Build Hanging Detection Configuration'
simple	22-May-2019 13:46:17	Running on server: post build plugin 'Clover Delta Calculator'
simple	22-May-2019 13:46:17	Running on server: post build plugin 'Maven Dependencies Postprocessor'
simple	22-May-2019 13:46:17	All post build plugins have finished
simple	22-May-2019 13:46:17	Generating build results summary...
simple	22-May-2019 13:46:17	Saving build results to disk...
simple	22-May-2019 13:46:17	Logging substituted variables...
simple	22-May-2019 13:46:17	Indexing build results...
simple	22-May-2019 13:46:17	Finished building CATS-PYC267-JOB1-19.