simple 29-Sep-2019 15:36:08 Build Clowder - pyclowder - boxhack - Default Job #1 (CATS-PYC39-JOB1-1) started building on agent buildserver-2.os.ncsa.edu simple 29-Sep-2019 15:36:08 Remote agent on host buildserver-2.os.ncsa.edu simple 29-Sep-2019 15:36:08 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC39-JOB1 simple 29-Sep-2019 15:36:08 Executing build Clowder - pyclowder - boxhack - Default Job #1 (CATS-PYC39-JOB1-1) simple 29-Sep-2019 15:36:08 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 29-Sep-2019 15:36:08 Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC39-JOB1 simple 29-Sep-2019 15:36:08 Updating source code to revision: aece55881bff026858b4167c55d068c6ba35772f simple 29-Sep-2019 15:36:08 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC39-JOB1/.git'. simple 29-Sep-2019 15:36:08 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC39-JOB1/.git/ simple 29-Sep-2019 15:36:08 Fetching 'refs/heads/boxhack' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder.git'. Will try to do a shallow fetch. simple 29-Sep-2019 15:36:08 Warning: Permanently added '[127.0.0.1]:39245' (RSA) to the list of known hosts. simple 29-Sep-2019 15:36:08 From ssh://127.0.0.1:39245/cats/pyclowder simple 29-Sep-2019 15:36:08 * [new branch] boxhack -> boxhack simple 29-Sep-2019 15:36:08 Checking out revision aece55881bff026858b4167c55d068c6ba35772f. simple 29-Sep-2019 15:36:08 Switched to branch 'boxhack' simple 29-Sep-2019 15:36:08 Updated source code to revision: aece55881bff026858b4167c55d068c6ba35772f simple 29-Sep-2019 15:36:08 Finished task 'Checkout Default Repository' with result: Success simple 29-Sep-2019 15:36:08 Running pre-build action: VCS Version Collector simple 29-Sep-2019 15:36:08 Starting task 'docker build and push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 29-Sep-2019 15:36:08 Beginning to execute external process for build 'Clowder - pyclowder - boxhack - Default Job #1 (CATS-PYC39-JOB1-1)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC39-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=boxhack\nbamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm\nbamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster\nbamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node\nbamboo_capability_system_builder_command_buckminster_4_4=/home/bamboo/buckminster-4.4/buckminster\nbamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster\nbamboo_planRepository_1_branchDisplayName=boxhack\nbamboo_repository_revision_number=aece55881bff026858b4167c55d068c6ba35772f\nbamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC39-JOB1-1\nbamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build\nbamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC39-JOB1\nbamboo_planRepository_1_name=pyclowder\nbamboo_buildKey=CATS-PYC39-JOB1\nbamboo_capability_system_os=linux\nbamboo_shortPlanName=pyclowder\nbamboo_planRepository_name=pyclowder\nbamboo_buildNumber=1\nbamboo_capability_system_builder_node_grunt_6=/home/bamboo/node-v6.9.1/bin/grunt\nbamboo_shortJobName=Default Job\nbamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC39-JOB1-1\nbamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder.git\nbamboo_repository_177831955_git_username=\nbamboo_agentId=140673028\nbamboo_planName=Clowder - pyclowder - boxhack\nbamboo_shortPlanKey=PYC39\nbamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt\nbamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node\nbamboo_shortJobKey=JOB1\nbamboo_planRepository_revision=aece55881bff026858b4167c55d068c6ba35772f\nbamboo_buildTimeStamp=2019-09-28T10:50:45.402-05:00\nbamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm\nbamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1\nbamboo_repository_git_branch=boxhack\nbamboo_buildResultKey=CATS-PYC39-JOB1-1\nbamboo_repository_branch_name=boxhack\nbamboo_buildPlanName=Clowder - pyclowder - boxhack - Default Job\nbamboo_planRepository_1_revision=aece55881bff026858b4167c55d068c6ba35772f\nbamboo_capability_system_builder_command_python3=/usr/bin/python3\nbamboo_repository_name=pyclowder\nbamboo_buildFailed=false\nbamboo_capability_system_docker_executable=/usr/bin/docker\nbamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt\nbamboo_repository_177831955_branch_name=boxhack\nbamboo_planRepository_branch=boxhack\nbamboo_repository_177831955_revision_number=aece55881bff026858b4167c55d068c6ba35772f\nbamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/usr/bin/git\nbamboo_repository_git_username=\nbamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13\nbamboo_planRepository_branchDisplayName=boxhack\nbamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs\nbamboo_planRepository_1_type=bbserver\nbamboo_planRepository_branchName=boxhack\nbamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7\nbamboo_capability_system_hostname=buildserver-1\nbamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66\nbamboo_repository_177831955_name=pyclowder\nbamboo_capability_system_software_mongo=/usr/bin/mongo\nbamboo_plan_storageTag=plan-177700883\nbamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs\nbamboo_repository_177831955_git_branch=boxhack\nbamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl\nbamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=bbserver\nbamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache\nbamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder.git\nbamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node\nbamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4\nbamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9\nbamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp\nbamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC39-JOB1\nbamboo_planKey=CATS-PYC39\nbamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder.git\nbamboo_planRepository_username=\nbamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41\nbamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh\nbamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60\nbamboo_repository_177831955_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder.git\nbamboo_planRepository_1_branchName=boxhack\n build 29-Sep-2019 15:36:08 Sending build context to Docker daemon 210.4kB build 29-Sep-2019 15:36:08 build 29-Sep-2019 15:36:08 Step 1/8 : FROM ubuntu:16.04 build 29-Sep-2019 15:36:08 ---> 657d80a6401d build 29-Sep-2019 15:36:08 Step 2/8 : ENV RABBITMQ_URI="amqp://guest:guest@rabbitmq:5672/%2F" RABBITMQ_EXCHANGE="clowder" RABBITMQ_QUEUE="" REGISTRATION_ENDPOINTS="https://clowder.ncsa.illinois.edu/extractors" MAIN_SCRIPT="" build 29-Sep-2019 15:36:08 ---> Running in 3a5f54b97fba build 29-Sep-2019 15:36:09 Removing intermediate container 3a5f54b97fba build 29-Sep-2019 15:36:09 ---> b0e3db298007 build 29-Sep-2019 15:36:09 Step 3/8 : RUN apt-get -q -q update && apt-get install -y --no-install-recommends python python-pip && pip install --upgrade setuptools && rm -rf /var/lib/apt/lists/* build 29-Sep-2019 15:36:09 ---> Running in d3afc89f404f build 29-Sep-2019 15:36:19 Reading package lists... build 29-Sep-2019 15:36:19 Building dependency tree... build 29-Sep-2019 15:36:19 Reading state information... build 29-Sep-2019 15:36:19 The following additional packages will be installed: build 29-Sep-2019 15:36:19 ca-certificates libexpat1 libffi6 libpython-stdlib libpython2.7-minimal build 29-Sep-2019 15:36:19 libpython2.7-stdlib libsqlite3-0 libssl1.0.0 mime-support openssl build 29-Sep-2019 15:36:19 python-minimal python-pip-whl python2.7 python2.7-minimal build 29-Sep-2019 15:36:19 Suggested packages: build 29-Sep-2019 15:36:19 python-doc python-tk python2.7-doc binutils binfmt-support build 29-Sep-2019 15:36:19 Recommended packages: build 29-Sep-2019 15:36:19 file build-essential python-all-dev python-setuptools python-wheel build 29-Sep-2019 15:36:19 The following NEW packages will be installed: build 29-Sep-2019 15:36:19 ca-certificates libexpat1 libffi6 libpython-stdlib libpython2.7-minimal build 29-Sep-2019 15:36:19 libpython2.7-stdlib libsqlite3-0 libssl1.0.0 mime-support openssl python build 29-Sep-2019 15:36:19 python-minimal python-pip python-pip-whl python2.7 python2.7-minimal build 29-Sep-2019 15:36:19 0 upgraded, 16 newly installed, 0 to remove and 0 not upgraded. build 29-Sep-2019 15:36:19 Need to get 7397 kB of archives. build 29-Sep-2019 15:36:19 After this operation, 24.8 MB of additional disk space will be used. build 29-Sep-2019 15:36:19 Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-minimal amd64 2.7.12-1ubuntu0~16.04.8 [339 kB] build 29-Sep-2019 15:36:20 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7-minimal amd64 2.7.12-1ubuntu0~16.04.8 [1261 kB] build 29-Sep-2019 15:36:21 Get:3 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-minimal amd64 2.7.12-1~16.04 [28.1 kB] build 29-Sep-2019 15:36:21 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 mime-support all 3.59ubuntu1 [31.0 kB] build 29-Sep-2019 15:36:22 Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1 amd64 2.1.0-7ubuntu0.16.04.5 [71.5 kB] build 29-Sep-2019 15:36:22 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 libffi6 amd64 3.2.1-4 [17.8 kB] build 29-Sep-2019 15:36:22 Get:7 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libsqlite3-0 amd64 3.11.0-1ubuntu1.2 [397 kB] build 29-Sep-2019 15:36:23 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libssl1.0.0 amd64 1.0.2g-1ubuntu4.15 [1084 kB] build 29-Sep-2019 15:36:24 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-stdlib amd64 2.7.12-1ubuntu0~16.04.8 [1885 kB] build 29-Sep-2019 15:36:25 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7 amd64 2.7.12-1ubuntu0~16.04.8 [224 kB] build 29-Sep-2019 15:36:26 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython-stdlib amd64 2.7.12-1~16.04 [7768 B] build 29-Sep-2019 15:36:26 Get:12 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python amd64 2.7.12-1~16.04 [137 kB] build 29-Sep-2019 15:36:26 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 openssl amd64 1.0.2g-1ubuntu4.15 [492 kB] build 29-Sep-2019 15:36:27 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ca-certificates all 20170717~16.04.2 [167 kB] build 29-Sep-2019 15:36:28 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-pip-whl all 8.1.1-2ubuntu0.4 [1110 kB] build 29-Sep-2019 15:36:28 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-pip all 8.1.1-2ubuntu0.4 [144 kB] build 29-Sep-2019 15:36:29 debconf: delaying package configuration, since apt-utils is not installed build 29-Sep-2019 15:36:29 Fetched 7397 kB in 9s (779 kB/s) build 29-Sep-2019 15:36:29 Selecting previously unselected package libpython2.7-minimal:amd64. build 29-Sep-2019 15:36:29 (Reading database ... build 29-Sep-2019 15:36:29 (Reading database ... 5% build 29-Sep-2019 15:36:29 (Reading database ... 10% build 29-Sep-2019 15:36:29 (Reading database ... 15% build 29-Sep-2019 15:36:29 (Reading database ... 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.../libpython2.7-minimal_2.7.12-1ubuntu0~16.04.8_amd64.deb ... build 29-Sep-2019 15:36:29 Unpacking libpython2.7-minimal:amd64 (2.7.12-1ubuntu0~16.04.8) ... build 29-Sep-2019 15:36:30 Selecting previously unselected package python2.7-minimal. build 29-Sep-2019 15:36:30 Preparing to unpack .../python2.7-minimal_2.7.12-1ubuntu0~16.04.8_amd64.deb ... build 29-Sep-2019 15:36:30 Unpacking python2.7-minimal (2.7.12-1ubuntu0~16.04.8) ... build 29-Sep-2019 15:36:30 Selecting previously unselected package python-minimal. build 29-Sep-2019 15:36:30 Preparing to unpack .../python-minimal_2.7.12-1~16.04_amd64.deb ... build 29-Sep-2019 15:36:31 Unpacking python-minimal (2.7.12-1~16.04) ... build 29-Sep-2019 15:36:31 Selecting previously unselected package mime-support. build 29-Sep-2019 15:36:31 Preparing to unpack .../mime-support_3.59ubuntu1_all.deb ... build 29-Sep-2019 15:36:32 Unpacking mime-support (3.59ubuntu1) ... build 29-Sep-2019 15:36:32 Selecting previously unselected package libexpat1:amd64. build 29-Sep-2019 15:36:32 Preparing to unpack .../libexpat1_2.1.0-7ubuntu0.16.04.5_amd64.deb ... build 29-Sep-2019 15:36:32 Unpacking libexpat1:amd64 (2.1.0-7ubuntu0.16.04.5) ... build 29-Sep-2019 15:36:33 Selecting previously unselected package libffi6:amd64. build 29-Sep-2019 15:36:33 Preparing to unpack .../libffi6_3.2.1-4_amd64.deb ... build 29-Sep-2019 15:36:33 Unpacking libffi6:amd64 (3.2.1-4) ... build 29-Sep-2019 15:36:33 Selecting previously unselected package libsqlite3-0:amd64. build 29-Sep-2019 15:36:33 Preparing to unpack .../libsqlite3-0_3.11.0-1ubuntu1.2_amd64.deb ... build 29-Sep-2019 15:36:33 Unpacking libsqlite3-0:amd64 (3.11.0-1ubuntu1.2) ... build 29-Sep-2019 15:36:34 Selecting previously unselected package libssl1.0.0:amd64. build 29-Sep-2019 15:36:34 Preparing to unpack .../libssl1.0.0_1.0.2g-1ubuntu4.15_amd64.deb ... build 29-Sep-2019 15:36:34 Unpacking libssl1.0.0:amd64 (1.0.2g-1ubuntu4.15) ... build 29-Sep-2019 15:36:35 Selecting previously unselected package libpython2.7-stdlib:amd64. build 29-Sep-2019 15:36:35 Preparing to unpack .../libpython2.7-stdlib_2.7.12-1ubuntu0~16.04.8_amd64.deb ... build 29-Sep-2019 15:36:35 Unpacking libpython2.7-stdlib:amd64 (2.7.12-1ubuntu0~16.04.8) ... build 29-Sep-2019 15:36:36 Selecting previously unselected package python2.7. build 29-Sep-2019 15:36:36 Preparing to unpack .../python2.7_2.7.12-1ubuntu0~16.04.8_amd64.deb ... build 29-Sep-2019 15:36:36 Unpacking python2.7 (2.7.12-1ubuntu0~16.04.8) ... build 29-Sep-2019 15:36:37 Selecting previously unselected package libpython-stdlib:amd64. build 29-Sep-2019 15:36:37 Preparing to unpack .../libpython-stdlib_2.7.12-1~16.04_amd64.deb ... build 29-Sep-2019 15:36:37 Unpacking libpython-stdlib:amd64 (2.7.12-1~16.04) ... build 29-Sep-2019 15:36:37 Processing triggers for libc-bin (2.23-0ubuntu11) ... build 29-Sep-2019 15:36:38 Setting up libpython2.7-minimal:amd64 (2.7.12-1ubuntu0~16.04.8) ... build 29-Sep-2019 15:36:38 Setting up python2.7-minimal (2.7.12-1ubuntu0~16.04.8) ... build 29-Sep-2019 15:36:38 Linking and byte-compiling packages for runtime python2.7... build 29-Sep-2019 15:36:38 Setting up python-minimal (2.7.12-1~16.04) ... build 29-Sep-2019 15:36:39 Selecting previously unselected package python. build 29-Sep-2019 15:36:39 (Reading database ... build 29-Sep-2019 15:36:39 (Reading database ... 5% build 29-Sep-2019 15:36:39 (Reading database ... 10% build 29-Sep-2019 15:36:39 (Reading database ... 15% build 29-Sep-2019 15:36:39 (Reading database ... 20% build 29-Sep-2019 15:36:39 (Reading database ... 25% build 29-Sep-2019 15:36:39 (Reading database ... 30% build 29-Sep-2019 15:36:39 (Reading database ... 35% build 29-Sep-2019 15:36:39 (Reading database ... 40% build 29-Sep-2019 15:36:39 (Reading database ... 45% build 29-Sep-2019 15:36:39 (Reading database ... 50% build 29-Sep-2019 15:36:39 (Reading database ... 55% build 29-Sep-2019 15:36:39 (Reading database ... 60% build 29-Sep-2019 15:36:39 (Reading database ... 65% build 29-Sep-2019 15:36:39 (Reading database ... 70% build 29-Sep-2019 15:36:39 (Reading database ... 75% build 29-Sep-2019 15:36:39 (Reading database ... 80% build 29-Sep-2019 15:36:39 (Reading database ... 85% build 29-Sep-2019 15:36:39 (Reading database ... 90% build 29-Sep-2019 15:36:39 (Reading database ... 95% build 29-Sep-2019 15:36:39 (Reading database ... 100% build 29-Sep-2019 15:36:39 (Reading database ... 5588 files and directories currently installed.) build 29-Sep-2019 15:36:39 Preparing to unpack .../python_2.7.12-1~16.04_amd64.deb ... build 29-Sep-2019 15:36:39 Unpacking python (2.7.12-1~16.04) ... build 29-Sep-2019 15:36:39 Selecting previously unselected package openssl. build 29-Sep-2019 15:36:39 Preparing to unpack .../openssl_1.0.2g-1ubuntu4.15_amd64.deb ... build 29-Sep-2019 15:36:39 Unpacking openssl (1.0.2g-1ubuntu4.15) ... build 29-Sep-2019 15:36:40 Selecting previously unselected package ca-certificates. build 29-Sep-2019 15:36:40 Preparing to unpack .../ca-certificates_20170717~16.04.2_all.deb ... build 29-Sep-2019 15:36:40 Unpacking ca-certificates (20170717~16.04.2) ... build 29-Sep-2019 15:36:41 Selecting previously unselected package python-pip-whl. build 29-Sep-2019 15:36:41 Preparing to unpack .../python-pip-whl_8.1.1-2ubuntu0.4_all.deb ... build 29-Sep-2019 15:36:41 Unpacking python-pip-whl (8.1.1-2ubuntu0.4) ... build 29-Sep-2019 15:36:42 Selecting previously unselected package python-pip. build 29-Sep-2019 15:36:42 Preparing to unpack .../python-pip_8.1.1-2ubuntu0.4_all.deb ... build 29-Sep-2019 15:36:42 Unpacking python-pip (8.1.1-2ubuntu0.4) ... build 29-Sep-2019 15:36:42 Setting up mime-support (3.59ubuntu1) ... build 29-Sep-2019 15:36:42 Setting up libexpat1:amd64 (2.1.0-7ubuntu0.16.04.5) ... build 29-Sep-2019 15:36:42 Setting up libffi6:amd64 (3.2.1-4) ... build 29-Sep-2019 15:36:43 Setting up libsqlite3-0:amd64 (3.11.0-1ubuntu1.2) ... build 29-Sep-2019 15:36:43 Setting up libssl1.0.0:amd64 (1.0.2g-1ubuntu4.15) ... build 29-Sep-2019 15:36:43 debconf: unable to initialize frontend: Dialog build 29-Sep-2019 15:36:43 debconf: (TERM is not set, so the dialog frontend is not usable.) build 29-Sep-2019 15:36:43 debconf: falling back to frontend: Readline build 29-Sep-2019 15:36:43 debconf: unable to initialize frontend: Readline build 29-Sep-2019 15:36:43 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) build 29-Sep-2019 15:36:43 debconf: falling back to frontend: Teletype build 29-Sep-2019 15:36:43 Setting up libpython2.7-stdlib:amd64 (2.7.12-1ubuntu0~16.04.8) ... build 29-Sep-2019 15:36:43 Setting up python2.7 (2.7.12-1ubuntu0~16.04.8) ... build 29-Sep-2019 15:36:44 Setting up libpython-stdlib:amd64 (2.7.12-1~16.04) ... build 29-Sep-2019 15:36:44 Setting up python (2.7.12-1~16.04) ... build 29-Sep-2019 15:36:44 Setting up openssl (1.0.2g-1ubuntu4.15) ... build 29-Sep-2019 15:36:45 Setting up ca-certificates (20170717~16.04.2) ... build 29-Sep-2019 15:36:45 debconf: unable to initialize frontend: Dialog build 29-Sep-2019 15:36:45 debconf: (TERM is not set, so the dialog frontend is not usable.) build 29-Sep-2019 15:36:45 debconf: falling back to frontend: Readline build 29-Sep-2019 15:36:45 debconf: unable to initialize frontend: Readline build 29-Sep-2019 15:36:45 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) build 29-Sep-2019 15:36:45 debconf: falling back to frontend: Teletype build 29-Sep-2019 15:36:46 Setting up python-pip-whl (8.1.1-2ubuntu0.4) ... build 29-Sep-2019 15:36:46 Setting up python-pip (8.1.1-2ubuntu0.4) ... build 29-Sep-2019 15:36:47 Processing triggers for libc-bin (2.23-0ubuntu11) ... build 29-Sep-2019 15:36:48 Processing triggers for ca-certificates (20170717~16.04.2) ... build 29-Sep-2019 15:36:48 Updating certificates in /etc/ssl/certs... build 29-Sep-2019 15:36:49 148 added, 0 removed; done. build 29-Sep-2019 15:36:49 Running hooks in /etc/ca-certificates/update.d... build 29-Sep-2019 15:36:49 done. build 29-Sep-2019 15:36:50 Collecting setuptools build 29-Sep-2019 15:36:51 Downloading https://files.pythonhosted.org/packages/b2/86/095d2f7829badc207c893dd4ac767e871f6cd547145df797ea26baea4e2e/setuptools-41.2.0-py2.py3-none-any.whl (576kB) build 29-Sep-2019 15:36:51 Installing collected packages: setuptools build 29-Sep-2019 15:36:51 Successfully installed setuptools-41.2.0 build 29-Sep-2019 15:36:51 You are using pip version 8.1.1, however version 19.2.3 is available. build 29-Sep-2019 15:36:51 You should consider upgrading via the 'pip install --upgrade pip' command. build 29-Sep-2019 15:36:53 Removing intermediate container d3afc89f404f build 29-Sep-2019 15:36:53 ---> 3a3f01320d1f build 29-Sep-2019 15:36:53 Step 4/8 : COPY pyclowder /tmp/pyclowder/pyclowder build 29-Sep-2019 15:36:53 ---> 22be1528061f build 29-Sep-2019 15:36:53 Step 5/8 : COPY setup.py description.rst /tmp/pyclowder/ build 29-Sep-2019 15:36:54 ---> 56be3047138b build 29-Sep-2019 15:36:54 Step 6/8 : RUN pip install --upgrade /tmp/pyclowder && rm -rf /tmp/pyclowder build 29-Sep-2019 15:36:54 ---> Running in 13f0679cf50e build 29-Sep-2019 15:36:56 Processing /tmp/pyclowder build 29-Sep-2019 15:36:56 Collecting enum34==1.1.6 (from pyclowder===2.0.3) build 29-Sep-2019 15:36:56 Downloading https://files.pythonhosted.org/packages/c5/db/e56e6b4bbac7c4a06de1c50de6fe1ef3810018ae11732a50f15f62c7d050/enum34-1.1.6-py2-none-any.whl build 29-Sep-2019 15:36:56 Collecting pika==0.11.2 (from pyclowder===2.0.3) build 29-Sep-2019 15:36:56 Downloading https://files.pythonhosted.org/packages/76/b4/0ada6918ac79ce4d8d45d0ba436ee21a1ef685047fb1dde4d2de0178b327/pika-0.11.2-py2.py3-none-any.whl (107kB) build 29-Sep-2019 15:36:56 Collecting PyYAML==3.12 (from pyclowder===2.0.3) build 29-Sep-2019 15:36:56 Downloading https://files.pythonhosted.org/packages/4a/85/db5a2df477072b2902b0eb892feb37d88ac635d36245a72a6a69b23b383a/PyYAML-3.12.tar.gz (253kB) build 29-Sep-2019 15:36:56 Collecting requests==2.18.4 (from pyclowder===2.0.3) build 29-Sep-2019 15:36:57 Downloading https://files.pythonhosted.org/packages/49/df/50aa1999ab9bde74656c2919d9c0c085fd2b3775fd3eca826012bef76d8c/requests-2.18.4-py2.py3-none-any.whl (88kB) build 29-Sep-2019 15:36:57 Collecting certifi>=2017.4.17 (from requests==2.18.4->pyclowder===2.0.3) build 29-Sep-2019 15:36:57 Downloading https://files.pythonhosted.org/packages/18/b0/8146a4f8dd402f60744fa380bc73ca47303cccf8b9190fd16a827281eac2/certifi-2019.9.11-py2.py3-none-any.whl (154kB) build 29-Sep-2019 15:36:57 Collecting chardet<3.1.0,>=3.0.2 (from requests==2.18.4->pyclowder===2.0.3) build 29-Sep-2019 15:36:57 Downloading https://files.pythonhosted.org/packages/bc/a9/01ffebfb562e4274b6487b4bb1ddec7ca55ec7510b22e4c51f14098443b8/chardet-3.0.4-py2.py3-none-any.whl (133kB) build 29-Sep-2019 15:36:57 Collecting idna<2.7,>=2.5 (from requests==2.18.4->pyclowder===2.0.3) build 29-Sep-2019 15:36:57 Downloading https://files.pythonhosted.org/packages/27/cc/6dd9a3869f15c2edfab863b992838277279ce92663d334df9ecf5106f5c6/idna-2.6-py2.py3-none-any.whl (56kB) build 29-Sep-2019 15:36:57 Collecting urllib3<1.23,>=1.21.1 (from requests==2.18.4->pyclowder===2.0.3) build 29-Sep-2019 15:36:57 Downloading https://files.pythonhosted.org/packages/63/cb/6965947c13a94236f6d4b8223e21beb4d576dc72e8130bd7880f600839b8/urllib3-1.22-py2.py3-none-any.whl (132kB) build 29-Sep-2019 15:36:57 Building wheels for collected packages: PyYAML build 29-Sep-2019 15:36:57 Running setup.py bdist_wheel for PyYAML: started build 29-Sep-2019 15:36:57 Running setup.py bdist_wheel for PyYAML: finished with status 'error' build 29-Sep-2019 15:36:57 Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-iPGhLo/PyYAML/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmp9Bu76Mpip-wheel- --python-tag cp27: build 29-Sep-2019 15:36:57 usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] build 29-Sep-2019 15:36:57 or: -c --help [cmd1 cmd2 ...] build 29-Sep-2019 15:36:57 or: -c --help-commands build 29-Sep-2019 15:36:57 or: -c cmd --help build 29-Sep-2019 15:36:57 build 29-Sep-2019 15:36:57 error: invalid command 'bdist_wheel' build 29-Sep-2019 15:36:57 build 29-Sep-2019 15:36:57 ---------------------------------------- build 29-Sep-2019 15:36:57  Failed building wheel for PyYAML build 29-Sep-2019 15:36:57  Running setup.py clean for PyYAML build 29-Sep-2019 15:36:57 Failed to build PyYAML build 29-Sep-2019 15:36:57 Installing collected packages: enum34, pika, PyYAML, certifi, chardet, idna, urllib3, requests, pyclowder build 29-Sep-2019 15:36:57 Running setup.py install for PyYAML: started build 29-Sep-2019 15:36:57 Running setup.py install for PyYAML: finished with status 'done' build 29-Sep-2019 15:36:58 Running setup.py install for pyclowder: started build 29-Sep-2019 15:36:58 Running setup.py install for pyclowder: finished with status 'done' build 29-Sep-2019 15:36:58 Successfully installed PyYAML-3.12 certifi-2019.9.11 chardet-3.0.4 enum34-1.1.6 idna-2.6 pika-0.11.2 pyclowder-2.0.3 requests-2.18.4 urllib3-1.22 build 29-Sep-2019 15:36:58 You are using pip version 8.1.1, however version 19.2.3 is available. build 29-Sep-2019 15:36:58 You should consider upgrading via the 'pip install --upgrade pip' command. build 29-Sep-2019 15:36:59 Removing intermediate container 13f0679cf50e build 29-Sep-2019 15:36:59 ---> af03b3efb9af build 29-Sep-2019 15:36:59 Step 7/8 : WORKDIR /home/clowder build 29-Sep-2019 15:36:59 ---> Running in 334e406c26eb build 29-Sep-2019 15:37:00 Removing intermediate container 334e406c26eb build 29-Sep-2019 15:37:00 ---> fccf79586313 build 29-Sep-2019 15:37:00 Step 8/8 : CMD python "./${MAIN_SCRIPT}" build 29-Sep-2019 15:37:00 ---> Running in 6e32358061f2 build 29-Sep-2019 15:37:00 Removing intermediate container 6e32358061f2 build 29-Sep-2019 15:37:00 ---> 2c542c45b502 build 29-Sep-2019 15:37:00 Successfully built 2c542c45b502 build 29-Sep-2019 15:37:01 Successfully tagged clowder/pyclowder:latest build 29-Sep-2019 15:37:01 Sending build context to Docker daemon 208.9kB build 29-Sep-2019 15:37:01 build 29-Sep-2019 15:37:01 Step 1/6 : FROM clowder/pyclowder build 29-Sep-2019 15:37:01 ---> 2c542c45b502 build 29-Sep-2019 15:37:01 Step 2/6 : ONBUILD COPY packages.* Dockerfile /home/clowder/ build 29-Sep-2019 15:37:01 ---> Running in dc2451b1ec50 build 29-Sep-2019 15:37:01 Removing intermediate container dc2451b1ec50 build 29-Sep-2019 15:37:01 ---> b5b6a8d06580 build 29-Sep-2019 15:37:01 Step 3/6 : ONBUILD RUN if [ -e packages.apt ]; then apt-get -q -q update && xargs apt-get -y install --no-install-recommends < packages.apt && rm -rf /var/lib/apt/lists/*; fi build 29-Sep-2019 15:37:02 ---> Running in 0a3965672ee9 build 29-Sep-2019 15:37:02 Removing intermediate container 0a3965672ee9 build 29-Sep-2019 15:37:02 ---> 25bb1a03f970 build 29-Sep-2019 15:37:02 Step 4/6 : ONBUILD COPY requirements.txt* Dockerfile /home/clowder/ build 29-Sep-2019 15:37:02 ---> Running in f8442feec065 build 29-Sep-2019 15:37:02 Removing intermediate container f8442feec065 build 29-Sep-2019 15:37:02 ---> d5075b931ff6 build 29-Sep-2019 15:37:02 Step 5/6 : ONBUILD RUN if [ -e requirements.txt ]; then pip install --no-cache-dir -r requirements.txt; fi build 29-Sep-2019 15:37:03 ---> Running in 6770dcb8ef27 build 29-Sep-2019 15:37:03 Removing intermediate container 6770dcb8ef27 build 29-Sep-2019 15:37:03 ---> d6bd91641f01 build 29-Sep-2019 15:37:03 Step 6/6 : ONBUILD ADD . /home/clowder/ build 29-Sep-2019 15:37:03 ---> Running in f4036d31b68e build 29-Sep-2019 15:37:04 Removing intermediate container f4036d31b68e build 29-Sep-2019 15:37:04 ---> 810463e9ea7a build 29-Sep-2019 15:37:04 Successfully built 810463e9ea7a build 29-Sep-2019 15:37:04 Successfully tagged clowder/pyclowder:onbuild build 29-Sep-2019 15:37:04 Sending build context to Docker daemon 12.29kB build 29-Sep-2019 15:37:04 build 29-Sep-2019 15:37:04 Step 1/5 : FROM clowder/pyclowder:onbuild build 29-Sep-2019 15:37:04 # Executing 5 build triggers build 29-Sep-2019 15:37:04 ---> Running in 9594b5dec049 build 29-Sep-2019 15:37:07 Removing intermediate container 9594b5dec049 build 29-Sep-2019 15:37:07 ---> Running in 8073c39adf08 build 29-Sep-2019 15:37:09 Removing intermediate container 8073c39adf08 build 29-Sep-2019 15:37:09 ---> 7d8c41bdf664 build 29-Sep-2019 15:37:09 Step 2/5 : ENV MAIN_SCRIPT="binary_extractor.py" RABBITMQ_QUEUE="" IMAGE_BINARY="" IMAGE_TYPE="" IMAGE_THUMBNAIL_COMMAND="" IMAGE_PREVIEW_COMMAND="" PREVIEW_BINARY="" PREVIEW_TYPE="" PREVIEW_COMMAND="" build 29-Sep-2019 15:37:10 ---> Running in e4ec819d7651 build 29-Sep-2019 15:37:10 Removing intermediate container e4ec819d7651 build 29-Sep-2019 15:37:10 ---> 2cb172d5c303 build 29-Sep-2019 15:37:10 Step 3/5 : ONBUILD COPY packages.* Dockerfile /home/clowder/ build 29-Sep-2019 15:37:10 ---> Running in bd2c61733f6a build 29-Sep-2019 15:37:10 Removing intermediate container bd2c61733f6a build 29-Sep-2019 15:37:10 ---> 0a3dc5130e81 build 29-Sep-2019 15:37:10 Step 4/5 : ONBUILD RUN if [ -e packages.apt ]; then apt-get -q -q update && xargs apt-get -y install --no-install-recommends < packages.apt && rm -rf /var/lib/apt/lists/*; fi build 29-Sep-2019 15:37:11 ---> Running in 647155e79d0f build 29-Sep-2019 15:37:11 Removing intermediate container 647155e79d0f build 29-Sep-2019 15:37:11 ---> aceccbaeea3e build 29-Sep-2019 15:37:11 Step 5/5 : ONBUILD COPY extractor_info.json /home/clowder/ build 29-Sep-2019 15:37:11 ---> Running in 5d2c99454806 build 29-Sep-2019 15:37:11 Removing intermediate container 5d2c99454806 build 29-Sep-2019 15:37:11 ---> 7993b9fd10c1 build 29-Sep-2019 15:37:11 Successfully built 7993b9fd10c1 build 29-Sep-2019 15:37:12 Successfully tagged clowder/extractors-binary-preview:onbuild build 29-Sep-2019 15:37:12 Sending build context to Docker daemon 9.216kB build 29-Sep-2019 15:37:12 build 29-Sep-2019 15:37:12 Step 1/2 : FROM clowder/pyclowder:onbuild build 29-Sep-2019 15:37:12 # Executing 5 build triggers build 29-Sep-2019 15:37:13 ---> Running in de5625859a76 build 29-Sep-2019 15:37:14 Removing intermediate container de5625859a76 build 29-Sep-2019 15:37:15 ---> Running in a0d875f74b72 build 29-Sep-2019 15:37:17 Removing intermediate container a0d875f74b72 build 29-Sep-2019 15:37:17 ---> cba1f5d8a9c2 build 29-Sep-2019 15:37:17 Step 2/2 : ENV MAIN_SCRIPT="wordcount.py" build 29-Sep-2019 15:37:18 ---> Running in 5f377622c351 build 29-Sep-2019 15:37:18 Removing intermediate container 5f377622c351 build 29-Sep-2019 15:37:18 ---> db9e76b3eca6 build 29-Sep-2019 15:37:18 Successfully built db9e76b3eca6 build 29-Sep-2019 15:37:18 Successfully tagged clowder/extractors-wordcount:latest simple 29-Sep-2019 15:37:18 Finished task 'docker build and push' with result: Success simple 29-Sep-2019 15:37:18 Running post build plugin 'Docker Container Cleanup' simple 29-Sep-2019 15:37:18 Running post build plugin 'NCover Results Collector' simple 29-Sep-2019 15:37:18 Running post build plugin 'Clover Results Collector' simple 29-Sep-2019 15:37:18 Running post build plugin 'npm Cache Cleanup' simple 29-Sep-2019 15:37:18 Running post build plugin 'Artifact Copier' simple 29-Sep-2019 15:37:18 Finalising the build... simple 29-Sep-2019 15:37:18 Stopping timer. simple 29-Sep-2019 15:37:18 Build CATS-PYC39-JOB1-1 completed. simple 29-Sep-2019 15:37:18 Running on server: post build plugin 'NCover Results Collector' simple 29-Sep-2019 15:37:18 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 29-Sep-2019 15:37:18 Running on server: post build plugin 'Clover Delta Calculator' simple 29-Sep-2019 15:37:18 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 29-Sep-2019 15:37:18 All post build plugins have finished simple 29-Sep-2019 15:37:18 Generating build results summary... simple 29-Sep-2019 15:37:18 Saving build results to disk... simple 29-Sep-2019 15:37:18 Logging substituted variables... simple 29-Sep-2019 15:37:18 Indexing build results... simple 29-Sep-2019 15:37:18 Finished building CATS-PYC39-JOB1-1.