simple	08-Feb-2019 09:08:13	Build Clowder - semanticextractor - master - Default Job #2 (CATS-SEM0-JOB1-2) started building on agent buildserver-2.os.ncsa.edu
simple	08-Feb-2019 09:08:13	Remote agent on host buildserver-2.os.ncsa.edu
simple	08-Feb-2019 09:08:13	Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM0-JOB1
simple	08-Feb-2019 09:08:13	Executing build Clowder - semanticextractor - master - Default Job #2 (CATS-SEM0-JOB1-2)
simple	08-Feb-2019 09:08:13	Starting task 'Source Code Checkout' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
simple	08-Feb-2019 09:08:13	Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM0-JOB1
simple	08-Feb-2019 09:08:13	Updating source code to revision: cef96bb28a6403fd20643a573d0b0c6b3c0cfaad
simple	08-Feb-2019 09:08:13	Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM0-JOB1/.git'.
simple	08-Feb-2019 09:08:13	Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM0-JOB1/.git/
simple	08-Feb-2019 09:08:49	Fetching 'refs/heads/master' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-semantic-mappings.git'. Will try to do a shallow fetch.
simple	08-Feb-2019 09:08:49	Warning: Permanently added '[127.0.0.1]:39577' (RSA) to the list of known hosts.
simple	08-Feb-2019 09:08:49	From ssh://127.0.0.1:39577/cats/extractors-semantic-mappings
simple	08-Feb-2019 09:08:49	 * [new branch]      master     -> master
simple	08-Feb-2019 09:08:49	Checking out revision cef96bb28a6403fd20643a573d0b0c6b3c0cfaad.
simple	08-Feb-2019 09:08:49	Already on 'master'
simple	08-Feb-2019 09:08:49	Updated source code to revision: cef96bb28a6403fd20643a573d0b0c6b3c0cfaad
simple	08-Feb-2019 09:08:49	Finished task 'Source Code Checkout' with result: Success
simple	08-Feb-2019 09:08:49	Running pre-build action: VCS Version Collector
simple	08-Feb-2019 09:08:49	Starting task 'docker build and push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
command	08-Feb-2019 09:08:49	Beginning to execute external process for build 'Clowder - semanticextractor - master - Default Job #2 (CATS-SEM0-JOB1-2)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM0-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=master\nbamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm\nbamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster\nbamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node\nbamboo_capability_system_builder_command_buckminster_4_4=/home/bamboo/buckminster-4.4/buckminster\nbamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster\nbamboo_planRepository_1_branchDisplayName=master\nbamboo_repository_revision_number=cef96bb28a6403fd20643a573d0b0c6b3c0cfaad\nbamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-SEM0-JOB1-2\nbamboo_repository_166953008_branch_name=master\nbamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build\nbamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM0-JOB1\nbamboo_planRepository_1_name=extractors-semantic-mappings\nbamboo_buildKey=CATS-SEM0-JOB1\nbamboo_capability_system_os=linux\nbamboo_shortPlanName=master\nbamboo_repository_166953008_git_branch=master\nbamboo_planRepository_name=extractors-semantic-mappings\nbamboo_buildNumber=2\nbamboo_capability_system_builder_node_grunt_6=/home/bamboo/node-v6.9.1/bin/grunt\nbamboo_shortJobName=Default Job\nbamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-SEM0-JOB1-2\nbamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-semantic-mappings.git\nbamboo_agentId=140673028\nbamboo_planName=Clowder - semanticextractor - master\nbamboo_shortPlanKey=SEM0\nbamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt\nbamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node\nbamboo_shortJobKey=JOB1\nbamboo_repository_166953008_git_username=\nbamboo_planRepository_revision=cef96bb28a6403fd20643a573d0b0c6b3c0cfaad\nbamboo_buildTimeStamp=2019-02-08T09:08:12.486-06:00\nbamboo_repository_previous_revision_number=ce2bfde0e6915c31f03ad09dd21ad259f328c087\nbamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm\nbamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1\nbamboo_planRepository_previousRevision=ce2bfde0e6915c31f03ad09dd21ad259f328c087\nbamboo_repository_166953008_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-semantic-mappings.git\nbamboo_repository_git_branch=master\nbamboo_buildResultKey=CATS-SEM0-JOB1-2\nbamboo_repository_branch_name=master\nbamboo_buildPlanName=Clowder - semanticextractor - master - Default Job\nbamboo_planRepository_1_revision=cef96bb28a6403fd20643a573d0b0c6b3c0cfaad\nbamboo_capability_system_builder_command_python3=/usr/bin/python3\nbamboo_repository_166953008_name=extractors-semantic-mappings\nbamboo_repository_name=extractors-semantic-mappings\nbamboo_repository_166953008_revision_number=cef96bb28a6403fd20643a573d0b0c6b3c0cfaad\nbamboo_buildFailed=false\nbamboo_capability_system_docker_executable=/usr/bin/docker\nbamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt\nbamboo_planRepository_branch=master\nbamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/usr/bin/git\nbamboo_repository_git_username=\nbamboo_planRepository_1_previousRevision=ce2bfde0e6915c31f03ad09dd21ad259f328c087\nbamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13\nbamboo_planRepository_branchDisplayName=master\nbamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs\nbamboo_planRepository_1_type=bbserver\nbamboo_planRepository_branchName=master\nbamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7\nbamboo_capability_system_hostname=buildserver-1\nbamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_software_mongo=/usr/bin/mongo\nbamboo_plan_storageTag=plan-166756447\nbamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs\nbamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl\nbamboo_repository_166953008_previous_revision_number=ce2bfde0e6915c31f03ad09dd21ad259f328c087\nbamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=bbserver\nbamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache\nbamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-semantic-mappings.git\nbamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node\nbamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4\nbamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9\nbamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp\nbamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM0-JOB1\nbamboo_planKey=CATS-SEM0\nbamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-semantic-mappings.git\nbamboo_planRepository_username=\nbamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41\nbamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh\nbamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60\nbamboo_planRepository_1_branchName=master\n
build	08-Feb-2019 09:08:49	Sending build context to Docker daemon   72.7kB
build	08-Feb-2019 09:08:49	
build	08-Feb-2019 09:08:49	Step 1/3 : FROM clowder/extractors-simple-extractor:onbuild
build	08-Feb-2019 09:08:50	onbuild: Pulling from clowder/extractors-simple-extractor
build	08-Feb-2019 09:08:50	b234f539f7a1: Pulling fs layer
build	08-Feb-2019 09:08:50	55172d420b43: Pulling fs layer
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build	08-Feb-2019 09:08:50	5bc4259cbf38: Pulling fs layer
build	08-Feb-2019 09:08:50	1676cf8b46e7: Pulling fs layer
build	08-Feb-2019 09:08:50	4cb456f25c1c: Pulling fs layer
build	08-Feb-2019 09:08:50	814fb0164599: Pulling fs layer
build	08-Feb-2019 09:08:50	65c9b6125188: Pulling fs layer
build	08-Feb-2019 09:08:50	23cd88412af6: Pulling fs layer
build	08-Feb-2019 09:08:50	5efcc1dc588e: Pulling fs layer
build	08-Feb-2019 09:08:50	9f4e3db137aa: Pulling fs layer
build	08-Feb-2019 09:08:50	43ae2841ad7a: Waiting
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build	08-Feb-2019 09:08:50	55172d420b43: Verifying Checksum
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build	08-Feb-2019 09:08:53	b234f539f7a1: Pull complete
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build	08-Feb-2019 09:08:59	9f4e3db137aa: Pull complete
build	08-Feb-2019 09:08:59	Digest: sha256:e9328b7204a0df11f05da9b2497189fa15042cc1655099a637dbe1301783316a
build	08-Feb-2019 09:08:59	Status: Downloaded newer image for clowder/extractors-simple-extractor:onbuild
build	08-Feb-2019 09:08:59	# Executing 5 build triggers
build	08-Feb-2019 09:09:00	 ---> Running in cc0f0df9f1e5
build	08-Feb-2019 09:09:01	Removing intermediate container cc0f0df9f1e5
build	08-Feb-2019 09:09:02	 ---> Running in 729e85e06ea0
build	08-Feb-2019 09:09:04	Removing intermediate container 729e85e06ea0
build	08-Feb-2019 09:09:04	 ---> 51a62f0dcdc9
build	08-Feb-2019 09:09:04	Step 2/3 : ENV EXTRACTION_FUNC="semanticmappings"
build	08-Feb-2019 09:09:04	 ---> Running in 206798bc598f
build	08-Feb-2019 09:09:05	Removing intermediate container 206798bc598f
build	08-Feb-2019 09:09:05	 ---> 660bc6887ff2
build	08-Feb-2019 09:09:05	Step 3/3 : ENV EXTRACTION_MODULE="semanticmappings"
build	08-Feb-2019 09:09:05	 ---> Running in 96b72d1f2947
build	08-Feb-2019 09:09:05	Removing intermediate container 96b72d1f2947
build	08-Feb-2019 09:09:05	 ---> ade880b46516
build	08-Feb-2019 09:09:05	Successfully built ade880b46516
build	08-Feb-2019 09:09:05	Successfully tagged clowder/extractors-semantic-mappings:latest
build	08-Feb-2019 09:09:05	The push refers to repository [docker.io/clowder/extractors-semantic-mappings]
build	08-Feb-2019 09:09:05	79985322fd4c: Preparing
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build	08-Feb-2019 09:09:07	79985322fd4c: Pushed
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build	08-Feb-2019 09:09:07	e7e08eb59dc2: Pushed
build	08-Feb-2019 09:09:08	db8c92bdb6e4: Pushed
build	08-Feb-2019 09:09:10	1.0.0: digest: sha256:baaed50e56eecae26cd8ecf4b1cf2b9b2276fa2ee106e64b7bafe30c709f2e72 size: 3650
build	08-Feb-2019 09:09:10	Untagged: clowder/extractors-semantic-mappings:1.0.0
build	08-Feb-2019 09:09:10	The push refers to repository [docker.io/clowder/extractors-semantic-mappings]
build	08-Feb-2019 09:09:10	79985322fd4c: Preparing
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build	08-Feb-2019 09:09:12	1.0: digest: sha256:baaed50e56eecae26cd8ecf4b1cf2b9b2276fa2ee106e64b7bafe30c709f2e72 size: 3650
build	08-Feb-2019 09:09:12	Untagged: clowder/extractors-semantic-mappings:1.0
build	08-Feb-2019 09:09:12	The push refers to repository [docker.io/clowder/extractors-semantic-mappings]
build	08-Feb-2019 09:09:12	79985322fd4c: Preparing
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build	08-Feb-2019 09:09:12	2de391e51d73: Preparing
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build	08-Feb-2019 09:09:12	686245e78935: Preparing
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build	08-Feb-2019 09:09:13	d7ff1dc646ba: Layer already exists
build	08-Feb-2019 09:09:13	2de391e51d73: Layer already exists
build	08-Feb-2019 09:09:13	686245e78935: Layer already exists
build	08-Feb-2019 09:09:13	644879075e24: Layer already exists
build	08-Feb-2019 09:09:13	1: digest: sha256:baaed50e56eecae26cd8ecf4b1cf2b9b2276fa2ee106e64b7bafe30c709f2e72 size: 3650
build	08-Feb-2019 09:09:14	Untagged: clowder/extractors-semantic-mappings:1
build	08-Feb-2019 09:09:14	The push refers to repository [docker.io/clowder/extractors-semantic-mappings]
build	08-Feb-2019 09:09:14	79985322fd4c: Preparing
build	08-Feb-2019 09:09:14	e7e08eb59dc2: Preparing
build	08-Feb-2019 09:09:14	db8c92bdb6e4: Preparing
build	08-Feb-2019 09:09:14	033ad660a7ce: Preparing
build	08-Feb-2019 09:09:14	9a5fbfe5e9a9: Preparing
build	08-Feb-2019 09:09:14	8fc00c9882a2: Preparing
build	08-Feb-2019 09:09:14	dde39433fd98: Preparing
build	08-Feb-2019 09:09:14	58f59f24e4b2: Preparing
build	08-Feb-2019 09:09:14	6bd6043b7dd6: Preparing
build	08-Feb-2019 09:09:14	9892653aa78e: Preparing
build	08-Feb-2019 09:09:14	282c9d7cfd7d: Preparing
build	08-Feb-2019 09:09:14	2de391e51d73: Preparing
build	08-Feb-2019 09:09:14	d73dd9e65295: Preparing
build	08-Feb-2019 09:09:14	686245e78935: Preparing
build	08-Feb-2019 09:09:14	d7ff1dc646ba: Preparing
build	08-Feb-2019 09:09:14	644879075e24: Preparing
build	08-Feb-2019 09:09:14	282c9d7cfd7d: Waiting
build	08-Feb-2019 09:09:14	2de391e51d73: Waiting
build	08-Feb-2019 09:09:14	d73dd9e65295: Waiting
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build	08-Feb-2019 09:09:14	9892653aa78e: Layer already exists
build	08-Feb-2019 09:09:14	282c9d7cfd7d: Layer already exists
build	08-Feb-2019 09:09:15	d73dd9e65295: Layer already exists
build	08-Feb-2019 09:09:15	686245e78935: Layer already exists
build	08-Feb-2019 09:09:15	d7ff1dc646ba: Layer already exists
build	08-Feb-2019 09:09:15	2de391e51d73: Layer already exists
build	08-Feb-2019 09:09:15	644879075e24: Layer already exists
build	08-Feb-2019 09:09:15	latest: digest: sha256:baaed50e56eecae26cd8ecf4b1cf2b9b2276fa2ee106e64b7bafe30c709f2e72 size: 3650
build	08-Feb-2019 09:09:15	Untagged: clowder/extractors-semantic-mappings:latest
build	08-Feb-2019 09:09:15	Untagged: clowder/extractors-semantic-mappings@sha256:baaed50e56eecae26cd8ecf4b1cf2b9b2276fa2ee106e64b7bafe30c709f2e72
build	08-Feb-2019 09:09:15	Deleted: sha256:ade880b46516d301eb6e124111ef81f9b2ba3be89ad04d9946aa0ba8603f368c
build	08-Feb-2019 09:09:15	Deleted: sha256:660bc6887ff21ba4bcb9af2ef6bb498aae029f201ea64b3d48c4aa716d0ec23f
build	08-Feb-2019 09:09:15	Deleted: sha256:51a62f0dcdc9da3887625ce8a38d793bff5098bd84eb210d745390ab6d05d4d4
build	08-Feb-2019 09:09:15	Deleted: sha256:19d68de571c9d313a87bafbc672de064ebbebcfc9f0bdaf237634ba87ce0d998
build	08-Feb-2019 09:09:15	Deleted: sha256:92cb0cb1f0d0e70f43d4197d7ce32d02ac28e470bf5af9560a6c2e18897650de
build	08-Feb-2019 09:09:15	Deleted: sha256:b92cab1fd054ef3f1a6197492e686609bbf9c2dab66a795f89704ec08d9113ac
build	08-Feb-2019 09:09:15	Deleted: sha256:2c28ef785288e2b7bf7a8f98072136356b6cdc69efb12c9335f3094df670fca8
build	08-Feb-2019 09:09:15	Deleted: sha256:ca641c9b6a66fced6005a32b66c0366580a480981c515a1aba5beb1558e7e269
build	08-Feb-2019 09:09:15	Deleted: sha256:74487e0d4b87fa025a8c67141ca8805cebd6577c53327a39ebaf70b237046573
build	08-Feb-2019 09:09:15	Deleted: sha256:9b8359f72d2ff539158d4a7a74a921c063cf876700d86741f6160f6def5b6ac6
simple	08-Feb-2019 09:09:15	Finished task 'docker build and push' with result: Success
simple	08-Feb-2019 09:09:15	Running post build plugin 'Docker Container Cleanup'
simple	08-Feb-2019 09:09:15	Running post build plugin 'NCover Results Collector'
simple	08-Feb-2019 09:09:15	Running post build plugin 'Clover Results Collector'
simple	08-Feb-2019 09:09:15	Running post build plugin 'npm Cache Cleanup'
simple	08-Feb-2019 09:09:15	Running post build plugin 'Artifact Copier'
simple	08-Feb-2019 09:09:15	Finalising the build...
simple	08-Feb-2019 09:09:15	Stopping timer.
simple	08-Feb-2019 09:09:15	Build CATS-SEM0-JOB1-2 completed.
simple	08-Feb-2019 09:09:15	Running on server: post build plugin 'NCover Results Collector'
simple	08-Feb-2019 09:09:15	Running on server: post build plugin 'Build Hanging Detection Configuration'
simple	08-Feb-2019 09:09:15	Running on server: post build plugin 'Clover Delta Calculator'
simple	08-Feb-2019 09:09:15	Running on server: post build plugin 'Maven Dependencies Postprocessor'
simple	08-Feb-2019 09:09:16	All post build plugins have finished
simple	08-Feb-2019 09:09:16	Generating build results summary...
simple	08-Feb-2019 09:09:16	Saving build results to disk...
simple	08-Feb-2019 09:09:16	Logging substituted variables...
simple	08-Feb-2019 09:09:16	Indexing build results...
simple	08-Feb-2019 09:09:16	Finished building CATS-SEM0-JOB1-2.