simple	28-Jan-2019 15:55:06	Build Clowder - semanticextractor - develop - Default Job #1 (CATS-SEM1-JOB1-1) started building on agent buildserver-2.os.ncsa.edu
simple	28-Jan-2019 15:55:06	Remote agent on host buildserver-2.os.ncsa.edu
simple	28-Jan-2019 15:55:07	Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM1-JOB1
simple	28-Jan-2019 15:55:07	Executing build Clowder - semanticextractor - develop - Default Job #1 (CATS-SEM1-JOB1-1)
simple	28-Jan-2019 15:55:07	Starting task 'Source Code Checkout' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
simple	28-Jan-2019 15:55:07	Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM1-JOB1
simple	28-Jan-2019 15:55:07	Updating source code to revision: 4de4220fc51640998d9ffb522d79f7d4febf81a4
simple	28-Jan-2019 15:55:07	Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM1-JOB1/.git'.
simple	28-Jan-2019 15:55:07	Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM1-JOB1/.git/
simple	28-Jan-2019 15:56:44	Fetching 'refs/heads/develop' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-semantic-mappings.git'. Will try to do a shallow fetch.
simple	28-Jan-2019 15:56:44	Warning: Permanently added '[127.0.0.1]:43253' (RSA) to the list of known hosts.
simple	28-Jan-2019 15:56:44	From ssh://127.0.0.1:43253/cats/extractors-semantic-mappings
simple	28-Jan-2019 15:56:44	 * [new branch]      develop    -> develop
simple	28-Jan-2019 15:56:44	Checking out revision 4de4220fc51640998d9ffb522d79f7d4febf81a4.
simple	28-Jan-2019 15:56:44	Switched to branch 'develop'
simple	28-Jan-2019 15:56:44	Updated source code to revision: 4de4220fc51640998d9ffb522d79f7d4febf81a4
simple	28-Jan-2019 15:56:44	Finished task 'Source Code Checkout' with result: Success
simple	28-Jan-2019 15:56:44	Running pre-build action: VCS Version Collector
simple	28-Jan-2019 15:56:44	Starting task 'docker build and push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
command	28-Jan-2019 15:56:44	Beginning to execute external process for build 'Clowder - semanticextractor - develop - Default Job #1 (CATS-SEM1-JOB1-1)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM1-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=develop\nbamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm\nbamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster\nbamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node\nbamboo_capability_system_builder_command_buckminster_4_4=/home/bamboo/buckminster-4.4/buckminster\nbamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster\nbamboo_planRepository_1_branchDisplayName=develop\nbamboo_repository_revision_number=4de4220fc51640998d9ffb522d79f7d4febf81a4\nbamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-SEM1-JOB1-1\nbamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build\nbamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM1-JOB1\nbamboo_planRepository_1_name=extractors-semantic-mappings\nbamboo_buildKey=CATS-SEM1-JOB1\nbamboo_repository_166953009_branch_name=develop\nbamboo_capability_system_os=linux\nbamboo_repository_166953009_revision_number=4de4220fc51640998d9ffb522d79f7d4febf81a4\nbamboo_shortPlanName=develop\nbamboo_planRepository_name=extractors-semantic-mappings\nbamboo_buildNumber=1\nbamboo_capability_system_builder_node_grunt_6=/home/bamboo/node-v6.9.1/bin/grunt\nbamboo_shortJobName=Default Job\nbamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-SEM1-JOB1-1\nbamboo_repository_166953009_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-semantic-mappings.git\nbamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-semantic-mappings.git\nbamboo_agentId=140673028\nbamboo_planName=Clowder - semanticextractor - develop\nbamboo_shortPlanKey=SEM1\nbamboo_repository_166953009_git_username=\nbamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt\nbamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node\nbamboo_shortJobKey=JOB1\nbamboo_planRepository_revision=4de4220fc51640998d9ffb522d79f7d4febf81a4\nbamboo_buildTimeStamp=2019-01-28T15:55:06.299-06:00\nbamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm\nbamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1\nbamboo_repository_git_branch=develop\nbamboo_buildResultKey=CATS-SEM1-JOB1-1\nbamboo_repository_branch_name=develop\nbamboo_buildPlanName=Clowder - semanticextractor - develop - Default Job\nbamboo_planRepository_1_revision=4de4220fc51640998d9ffb522d79f7d4febf81a4\nbamboo_capability_system_builder_command_python3=/usr/bin/python3\nbamboo_repository_name=extractors-semantic-mappings\nbamboo_buildFailed=false\nbamboo_capability_system_docker_executable=/usr/bin/docker\nbamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt\nbamboo_planRepository_branch=develop\nbamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/usr/bin/git\nbamboo_repository_git_username=\nbamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13\nbamboo_repository_166953009_name=extractors-semantic-mappings\nbamboo_planRepository_branchDisplayName=develop\nbamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs\nbamboo_planRepository_1_type=bbserver\nbamboo_planRepository_branchName=develop\nbamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7\nbamboo_capability_system_hostname=buildserver-1\nbamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66\nbamboo_repository_166953009_git_branch=develop\nbamboo_capability_system_software_mongo=/usr/bin/mongo\nbamboo_plan_storageTag=plan-166756449\nbamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs\nbamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl\nbamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=bbserver\nbamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache\nbamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-semantic-mappings.git\nbamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node\nbamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4\nbamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9\nbamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp\nbamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-SEM1-JOB1\nbamboo_planKey=CATS-SEM1\nbamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-semantic-mappings.git\nbamboo_planRepository_username=\nbamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66\nbamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41\nbamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh\nbamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60\nbamboo_planRepository_1_branchName=develop\n
build	28-Jan-2019 15:56:44	Sending build context to Docker daemon  70.14kB
build	28-Jan-2019 15:56:44	
build	28-Jan-2019 15:56:44	Step 1/3 : FROM clowder/extractors-simple-extractor:onbuild
build	28-Jan-2019 15:56:45	onbuild: Pulling from clowder/extractors-simple-extractor
build	28-Jan-2019 15:56:45	b234f539f7a1: Pulling fs layer
build	28-Jan-2019 15:56:45	55172d420b43: Pulling fs layer
build	28-Jan-2019 15:56:45	5ba5bbeb6b91: Pulling fs layer
build	28-Jan-2019 15:56:45	43ae2841ad7a: Pulling fs layer
build	28-Jan-2019 15:56:45	f6c9c6de4190: Pulling fs layer
build	28-Jan-2019 15:56:45	5bc4259cbf38: Pulling fs layer
build	28-Jan-2019 15:56:45	1676cf8b46e7: Pulling fs layer
build	28-Jan-2019 15:56:45	4cb456f25c1c: Pulling fs layer
build	28-Jan-2019 15:56:45	814fb0164599: Pulling fs layer
build	28-Jan-2019 15:56:45	65c9b6125188: Pulling fs layer
build	28-Jan-2019 15:56:45	23cd88412af6: Pulling fs layer
build	28-Jan-2019 15:56:45	5efcc1dc588e: Pulling fs layer
build	28-Jan-2019 15:56:45	9f4e3db137aa: Pulling fs layer
build	28-Jan-2019 15:56:45	4cb456f25c1c: Waiting
build	28-Jan-2019 15:56:45	814fb0164599: Waiting
build	28-Jan-2019 15:56:45	65c9b6125188: Waiting
build	28-Jan-2019 15:56:45	23cd88412af6: Waiting
build	28-Jan-2019 15:56:45	5efcc1dc588e: Waiting
build	28-Jan-2019 15:56:45	9f4e3db137aa: Waiting
build	28-Jan-2019 15:56:45	f6c9c6de4190: Waiting
build	28-Jan-2019 15:56:45	43ae2841ad7a: Waiting
build	28-Jan-2019 15:56:45	5bc4259cbf38: Waiting
build	28-Jan-2019 15:56:45	1676cf8b46e7: Waiting
build	28-Jan-2019 15:56:45	55172d420b43: Verifying Checksum
build	28-Jan-2019 15:56:45	55172d420b43: Download complete
build	28-Jan-2019 15:56:45	5ba5bbeb6b91: Verifying Checksum
build	28-Jan-2019 15:56:45	5ba5bbeb6b91: Download complete
build	28-Jan-2019 15:56:45	f6c9c6de4190: Verifying Checksum
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build	28-Jan-2019 15:56:45	1676cf8b46e7: Verifying Checksum
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build	28-Jan-2019 15:56:45	4cb456f25c1c: Verifying Checksum
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build	28-Jan-2019 15:56:46	5bc4259cbf38: Verifying Checksum
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build	28-Jan-2019 15:56:46	814fb0164599: Verifying Checksum
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build	28-Jan-2019 15:56:46	65c9b6125188: Verifying Checksum
build	28-Jan-2019 15:56:46	65c9b6125188: Download complete
build	28-Jan-2019 15:56:46	23cd88412af6: Verifying Checksum
build	28-Jan-2019 15:56:46	23cd88412af6: Download complete
build	28-Jan-2019 15:56:46	5efcc1dc588e: Verifying Checksum
build	28-Jan-2019 15:56:46	5efcc1dc588e: Download complete
build	28-Jan-2019 15:56:46	b234f539f7a1: Verifying Checksum
build	28-Jan-2019 15:56:46	b234f539f7a1: Download complete
build	28-Jan-2019 15:56:47	9f4e3db137aa: Verifying Checksum
build	28-Jan-2019 15:56:47	9f4e3db137aa: Download complete
build	28-Jan-2019 15:56:48	b234f539f7a1: Pull complete
build	28-Jan-2019 15:56:49	55172d420b43: Pull complete
build	28-Jan-2019 15:56:49	5ba5bbeb6b91: Pull complete
build	28-Jan-2019 15:56:50	43ae2841ad7a: Pull complete
build	28-Jan-2019 15:56:50	f6c9c6de4190: Pull complete
build	28-Jan-2019 15:56:51	5bc4259cbf38: Pull complete
build	28-Jan-2019 15:56:51	1676cf8b46e7: Pull complete
build	28-Jan-2019 15:56:51	4cb456f25c1c: Pull complete
build	28-Jan-2019 15:56:52	814fb0164599: Pull complete
build	28-Jan-2019 15:56:52	65c9b6125188: Pull complete
build	28-Jan-2019 15:56:52	23cd88412af6: Pull complete
build	28-Jan-2019 15:56:53	5efcc1dc588e: Pull complete
build	28-Jan-2019 15:56:53	9f4e3db137aa: Pull complete
build	28-Jan-2019 15:56:54	Digest: sha256:e9328b7204a0df11f05da9b2497189fa15042cc1655099a637dbe1301783316a
build	28-Jan-2019 15:56:54	Status: Downloaded newer image for clowder/extractors-simple-extractor:onbuild
build	28-Jan-2019 15:56:54	# Executing 5 build triggers
build	28-Jan-2019 15:56:54	 ---> Running in 71048b8d3b74
build	28-Jan-2019 15:56:56	Removing intermediate container 71048b8d3b74
build	28-Jan-2019 15:56:57	 ---> Running in 99d00cac17af
build	28-Jan-2019 15:56:58	Removing intermediate container 99d00cac17af
build	28-Jan-2019 15:56:58	 ---> 4682091b1a06
build	28-Jan-2019 15:56:58	Step 2/3 : ENV EXTRACTION_FUNC="semanticmappings"
build	28-Jan-2019 15:56:58	 ---> Running in ff2c8efd1d2e
build	28-Jan-2019 15:56:59	Removing intermediate container ff2c8efd1d2e
build	28-Jan-2019 15:56:59	 ---> 60eeb6bf6703
build	28-Jan-2019 15:56:59	Step 3/3 : ENV EXTRACTION_MODULE="semanticmappings"
build	28-Jan-2019 15:57:00	 ---> Running in 96e462c53293
build	28-Jan-2019 15:57:00	Removing intermediate container 96e462c53293
build	28-Jan-2019 15:57:00	 ---> 586bc9f0d1bc
build	28-Jan-2019 15:57:00	Successfully built 586bc9f0d1bc
build	28-Jan-2019 15:57:00	Successfully tagged clowder/extractors-semantic-mappings:latest
build	28-Jan-2019 15:57:00	The push refers to repository [docker.io/clowder/extractors-semantic-mappings]
build	28-Jan-2019 15:57:00	64e1ddbe179d: Preparing
build	28-Jan-2019 15:57:00	d709dfcf3161: Preparing
build	28-Jan-2019 15:57:00	afa278524d63: Preparing
build	28-Jan-2019 15:57:00	033ad660a7ce: Preparing
build	28-Jan-2019 15:57:00	9a5fbfe5e9a9: Preparing
build	28-Jan-2019 15:57:00	8fc00c9882a2: Preparing
build	28-Jan-2019 15:57:00	dde39433fd98: Preparing
build	28-Jan-2019 15:57:00	58f59f24e4b2: Preparing
build	28-Jan-2019 15:57:00	6bd6043b7dd6: Preparing
build	28-Jan-2019 15:57:00	9892653aa78e: Preparing
build	28-Jan-2019 15:57:00	282c9d7cfd7d: Preparing
build	28-Jan-2019 15:57:00	2de391e51d73: Preparing
build	28-Jan-2019 15:57:00	d73dd9e65295: Preparing
build	28-Jan-2019 15:57:00	686245e78935: Preparing
build	28-Jan-2019 15:57:00	d7ff1dc646ba: Preparing
build	28-Jan-2019 15:57:00	644879075e24: Preparing
build	28-Jan-2019 15:57:00	8fc00c9882a2: Waiting
build	28-Jan-2019 15:57:00	dde39433fd98: Waiting
build	28-Jan-2019 15:57:00	58f59f24e4b2: Waiting
build	28-Jan-2019 15:57:00	6bd6043b7dd6: Waiting
build	28-Jan-2019 15:57:00	9892653aa78e: Waiting
build	28-Jan-2019 15:57:00	282c9d7cfd7d: Waiting
build	28-Jan-2019 15:57:00	2de391e51d73: Waiting
build	28-Jan-2019 15:57:00	d73dd9e65295: Waiting
build	28-Jan-2019 15:57:00	644879075e24: Waiting
build	28-Jan-2019 15:57:00	686245e78935: Waiting
build	28-Jan-2019 15:57:00	d7ff1dc646ba: Waiting
build	28-Jan-2019 15:57:01	9a5fbfe5e9a9: Layer already exists
build	28-Jan-2019 15:57:01	033ad660a7ce: Layer already exists
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build	28-Jan-2019 15:57:02	9892653aa78e: Layer already exists
build	28-Jan-2019 15:57:02	282c9d7cfd7d: Layer already exists
build	28-Jan-2019 15:57:02	d709dfcf3161: Pushed
build	28-Jan-2019 15:57:02	64e1ddbe179d: Pushed
build	28-Jan-2019 15:57:02	2de391e51d73: Layer already exists
build	28-Jan-2019 15:57:02	afa278524d63: Pushed
build	28-Jan-2019 15:57:02	d73dd9e65295: Layer already exists
build	28-Jan-2019 15:57:02	686245e78935: Layer already exists
build	28-Jan-2019 15:57:02	d7ff1dc646ba: Layer already exists
build	28-Jan-2019 15:57:02	644879075e24: Layer already exists
build	28-Jan-2019 15:57:05	develop: digest: sha256:7f6abd635d44bc4be1882a87e5336c25d86569ede70fa65940680cfaf74e3aef size: 3650
build	28-Jan-2019 15:57:06	Untagged: clowder/extractors-semantic-mappings:develop
build	28-Jan-2019 15:57:06	Untagged: clowder/extractors-semantic-mappings:latest
build	28-Jan-2019 15:57:06	Untagged: clowder/extractors-semantic-mappings@sha256:7f6abd635d44bc4be1882a87e5336c25d86569ede70fa65940680cfaf74e3aef
build	28-Jan-2019 15:57:06	Deleted: sha256:586bc9f0d1bc8cb19adac14c873dd5e930cdf556f4eba30fae86913bbff980a7
build	28-Jan-2019 15:57:06	Deleted: sha256:60eeb6bf6703df4895e12393246dca15863b903da1ee51adf12d50cf59452f97
build	28-Jan-2019 15:57:06	Deleted: sha256:4682091b1a06d08847a07a227b3c95e7f0c587207affac66316bd9c255b6587d
build	28-Jan-2019 15:57:06	Deleted: sha256:dc570d3c7167660e1fc9ada8cb7ca20e11796d252a9e832ad5b2c9983eac2389
build	28-Jan-2019 15:57:06	Deleted: sha256:576999f44d1130a71772c7ff2085762b40d4cbb5e39926271b1ba5af3d579414
build	28-Jan-2019 15:57:06	Deleted: sha256:d017fa26b3b43686899c5a96c759613e9afb21a5c80d627a908e47a06b929ac2
build	28-Jan-2019 15:57:06	Deleted: sha256:f26b03a816c8e02a554f302bbf70b23adcb40d24a32b4fdeecf1bbbb44505ae7
build	28-Jan-2019 15:57:06	Deleted: sha256:a8d606f904aabef605aa6e9f223f28bec4ec3caca58446babd51c85320ab7a7b
build	28-Jan-2019 15:57:06	Deleted: sha256:db83b7f9c9691ce6d00d2926b3b2babb907ae5a14f0200e633e45e92f238d82f
build	28-Jan-2019 15:57:06	Deleted: sha256:01d82031ba335e45698f0260238324b2de524334ea7fba72ce73e23c31512807
simple	28-Jan-2019 15:57:06	Finished task 'docker build and push' with result: Success
simple	28-Jan-2019 15:57:06	Running post build plugin 'Docker Container Cleanup'
simple	28-Jan-2019 15:57:06	Running post build plugin 'NCover Results Collector'
simple	28-Jan-2019 15:57:06	Running post build plugin 'Clover Results Collector'
simple	28-Jan-2019 15:57:06	Running post build plugin 'npm Cache Cleanup'
simple	28-Jan-2019 15:57:06	Running post build plugin 'Artifact Copier'
simple	28-Jan-2019 15:57:06	Finalising the build...
simple	28-Jan-2019 15:57:06	Stopping timer.
simple	28-Jan-2019 15:57:06	Build CATS-SEM1-JOB1-1 completed.
simple	28-Jan-2019 15:57:06	Running on server: post build plugin 'NCover Results Collector'
simple	28-Jan-2019 15:57:06	Running on server: post build plugin 'Build Hanging Detection Configuration'
simple	28-Jan-2019 15:57:06	Running on server: post build plugin 'Clover Delta Calculator'
simple	28-Jan-2019 15:57:06	Running on server: post build plugin 'Maven Dependencies Postprocessor'
simple	28-Jan-2019 15:57:06	All post build plugins have finished
simple	28-Jan-2019 15:57:06	Generating build results summary...
simple	28-Jan-2019 15:57:06	Saving build results to disk...
simple	28-Jan-2019 15:57:06	Logging substituted variables...
simple	28-Jan-2019 15:57:06	Indexing build results...
simple	28-Jan-2019 15:57:06	Finished building CATS-SEM1-JOB1-1.