simple 25-Aug-2023 10:26:29 Build CoverCrop - API - feature-CCROP-424-update-default-experiment-file-for-2023-2024 - Default Job #3 (CCROP-API10-JOB1-3) is being prepared for building on agent buildserver-1.ncsa.illinois.edu, bamboo version: 9.3.1 simple 25-Aug-2023 10:26:29 Remote agent on host buildserver-1.ncsa.illinois.edu simple 25-Aug-2023 10:26:29 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CCROP-API10-JOB1 simple 25-Aug-2023 10:26:29 Executing build CoverCrop - API - feature-CCROP-424-update-default-experiment-file-for-2023-2024 - Default Job #3 (CCROP-API10-JOB1-3) simple 25-Aug-2023 10:26:29 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 25-Aug-2023 10:26:29 Build always requires a clean checkout simple 25-Aug-2023 10:26:29 Cleaning build directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CCROP-API10-JOB1' simple 25-Aug-2023 10:26:30 Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CCROP-API10-JOB1 simple 25-Aug-2023 10:26:30 Updating source code to revision: eaabb112dbc60723cd2e65605de0cee9a13a169b simple 25-Aug-2023 10:26:30 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CCROP-API10-JOB1/.git'. simple 25-Aug-2023 10:26:30 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CCROP-API10-JOB1/.git/ simple 25-Aug-2023 10:26:31 Fetching 'refs/heads/feature/CCROP-424-update-default-experiment-file-for-2023-2024' from 'ssh://git@opensource.ncsa.illinois.edu:7999/ccrop/service.git'. simple 25-Aug-2023 10:26:31 Warning: Permanently added '[127.0.0.1]:32877' (RSA) to the list of known hosts. simple 25-Aug-2023 10:31:54 Checking out revision eaabb112dbc60723cd2e65605de0cee9a13a169b. simple 25-Aug-2023 10:31:58 Switched to branch 'feature/CCROP-424-update-default-experiment-file-for-2023-2024' simple 25-Aug-2023 10:31:58 Updated source code to revision: eaabb112dbc60723cd2e65605de0cee9a13a169b simple 25-Aug-2023 10:31:58 Finished task 'Checkout Default Repository' with result: Success simple 25-Aug-2023 10:31:58 Running pre-build action: Build Log Labeller Pre Build Action simple 25-Aug-2023 10:31:58 Running pre-build action: VCS Version Collector simple 25-Aug-2023 10:31:58 Build CoverCrop - API - feature-CCROP-424-update-default-experiment-file-for-2023-2024 - Default Job #3 (CCROP-API10-JOB1-3) started building on agent 'buildserver-1.ncsa.illinois.edu' (Remote agent on host buildserver-1.ncsa.illinois.edu) simple 25-Aug-2023 10:31:58 Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 25-Aug-2023 10:31:58 Beginning to execute external process for build 'CoverCrop - API - feature-CCROP-424-update-default-experiment-file-for-2023-2024 - Default Job #3 (CCROP-API10-JOB1-3)'\n ... running command line: \n/bin/sh docker.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CCROP-API10-JOB1\n error 25-Aug-2023 10:31:58 #1 [internal] load build definition from Dockerfile error 25-Aug-2023 10:31:58 #1 transferring dockerfile: 1.24kB 0.0s done error 25-Aug-2023 10:31:58 #1 DONE 0.0s error 25-Aug-2023 10:31:58 error 25-Aug-2023 10:31:58 #2 [internal] load .dockerignore error 25-Aug-2023 10:31:58 #2 transferring context: 812B 0.0s done error 25-Aug-2023 10:31:58 #2 DONE 0.0s error 25-Aug-2023 10:31:58 error 25-Aug-2023 10:31:58 #3 [internal] load metadata for docker.io/library/maven:3-jdk-8 error 25-Aug-2023 10:31:59 #3 DONE 0.3s error 25-Aug-2023 10:31:59 error 25-Aug-2023 10:31:59 #4 [internal] load metadata for docker.io/library/openjdk:14-slim error 25-Aug-2023 10:31:59 #4 DONE 0.3s error 25-Aug-2023 10:31:59 error 25-Aug-2023 10:31:59 #5 [build 1/6] FROM docker.io/library/maven:3-jdk-8@sha256:ff18d86faefa15d1445d0fa4874408cc96dec068eb3487a0fc6d07f359a24607 error 25-Aug-2023 10:31:59 #5 DONE 0.0s error 25-Aug-2023 10:31:59 error 25-Aug-2023 10:31:59 #6 [stage-1 1/9] FROM docker.io/library/openjdk:14-slim@sha256:95bd8202bd64d4e36ffdf824588c0551b35e8fc3f279492c561e8dfb4d404c70 error 25-Aug-2023 10:31:59 #6 DONE 0.0s error 25-Aug-2023 10:31:59 error 25-Aug-2023 10:31:59 #7 [internal] load build context error 25-Aug-2023 10:32:01 #7 transferring context: 391.45MB 2.7s done error 25-Aug-2023 10:32:01 #7 DONE 2.7s error 25-Aug-2023 10:32:01 error 25-Aug-2023 10:32:01 #8 [stage-1 3/9] RUN apt-get update && apt-get install -y python3 python3-dev python3-pip python3-setuptools binutils libproj-dev gdal-bin libgdal-dev g++ --no-install-recommends && apt-get clean -y error 25-Aug-2023 10:32:01 #8 CACHED error 25-Aug-2023 10:32:01 error 25-Aug-2023 10:32:01 #9 [build 4/6] RUN wget https://github.com/sandeep-ps/translator-dssat/archive/master.zip error 25-Aug-2023 10:32:01 #9 CACHED error 25-Aug-2023 10:32:01 error 25-Aug-2023 10:32:01 #10 [stage-1 2/9] RUN apt update && apt upgrade -y error 25-Aug-2023 10:32:01 #10 CACHED error 25-Aug-2023 10:32:01 error 25-Aug-2023 10:32:01 #11 [build 2/6] RUN apt-get update && apt-get -y install net-tools error 25-Aug-2023 10:32:01 #11 CACHED error 25-Aug-2023 10:32:01 error 25-Aug-2023 10:32:01 #12 [build 3/6] WORKDIR /src error 25-Aug-2023 10:32:01 #12 CACHED error 25-Aug-2023 10:32:01 error 25-Aug-2023 10:32:01 #13 [build 5/6] RUN unzip -o master.zip error 25-Aug-2023 10:32:01 #13 CACHED error 25-Aug-2023 10:32:01 error 25-Aug-2023 10:32:01 #14 [stage-1 4/9] COPY ./requirements.txt /root/service/requirements.txt error 25-Aug-2023 10:32:01 #14 CACHED error 25-Aug-2023 10:32:01 error 25-Aug-2023 10:32:01 #15 [build 6/6] RUN mvn -f translator-dssat-master/pom.xml -DskipTests package error 25-Aug-2023 10:32:01 #15 CACHED error 25-Aug-2023 10:32:01 error 25-Aug-2023 10:32:01 #16 [stage-1 5/9] COPY --from=build /src/translator-dssat-master/target/*.jar /root/service/lib/translator-dssat-master/target/ error 25-Aug-2023 10:32:01 #16 CACHED error 25-Aug-2023 10:32:01 error 25-Aug-2023 10:32:01 #17 [stage-1 6/9] RUN pip3 install --upgrade pip==22.3.1 error 25-Aug-2023 10:32:03 #17 1.208 Collecting pip==22.3.1 error 25-Aug-2023 10:32:03 #17 1.397 Downloading https://files.pythonhosted.org/packages/09/bd/2410905c76ee14c62baf69e3f4aa780226c1bbfc9485731ad018e35b0cb5/pip-22.3.1-py3-none-any.whl (2.1MB) error 25-Aug-2023 10:32:03 #17 1.715 Installing collected packages: pip error 25-Aug-2023 10:32:03 #17 1.715 Found existing installation: pip 18.1 error 25-Aug-2023 10:32:03 #17 1.719 Not uninstalling pip at /usr/lib/python3/dist-packages, outside environment /usr error 25-Aug-2023 10:32:03 #17 1.719 Can't uninstall 'pip'. No files were found to uninstall. error 25-Aug-2023 10:32:04 #17 2.819 Successfully installed pip-22.3.1 error 25-Aug-2023 10:32:04 #17 DONE 3.1s error 25-Aug-2023 10:32:05 error 25-Aug-2023 10:32:05 #18 [stage-1 7/9] RUN pip3 install -r /root/service/requirements.txt error 25-Aug-2023 10:32:05 #18 0.873 Collecting click==6.7 error 25-Aug-2023 10:32:05 #18 0.901 Downloading click-6.7-py2.py3-none-any.whl (71 kB) error 25-Aug-2023 10:32:05 #18 0.912 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 71.2/71.2 kB 7.8 MB/s eta 0:00:00 error 25-Aug-2023 10:32:05 #18 0.957 Collecting Flask==0.12.2 error 25-Aug-2023 10:32:05 #18 0.969 Downloading Flask-0.12.2-py2.py3-none-any.whl (83 kB) error 25-Aug-2023 10:32:06 #18 0.976 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 83.0/83.0 kB 16.7 MB/s eta 0:00:00 error 25-Aug-2023 10:32:06 #18 1.006 Collecting Flask-RESTful==0.3.6 error 25-Aug-2023 10:32:06 #18 1.014 Downloading Flask_RESTful-0.3.6-py2.py3-none-any.whl (25 kB) error 25-Aug-2023 10:32:06 #18 1.052 Collecting Flask-SQLAlchemy==2.3.2 error 25-Aug-2023 10:32:06 #18 1.060 Downloading Flask_SQLAlchemy-2.3.2-py2.py3-none-any.whl (16 kB) error 25-Aug-2023 10:32:06 #18 1.098 Collecting Flask-Cors==3.0.3 error 25-Aug-2023 10:32:06 #18 1.107 Downloading Flask_Cors-3.0.3-py2.py3-none-any.whl (15 kB) error 25-Aug-2023 10:32:06 #18 1.144 Collecting gdal==2.2.2 error 25-Aug-2023 10:32:06 #18 1.154 Downloading GDAL-2.2.2.tar.gz (475 kB) error 25-Aug-2023 10:32:06 #18 1.169 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 475.3/475.3 kB 39.2 MB/s eta 0:00:00 error 25-Aug-2023 10:32:06 #18 1.227 Preparing metadata (setup.py): started error 25-Aug-2023 10:32:06 #18 1.436 Preparing metadata (setup.py): finished with status 'done' error 25-Aug-2023 10:32:06 #18 1.475 Collecting geopandas==0.5.0 error 25-Aug-2023 10:32:06 #18 1.484 Downloading geopandas-0.5.0-py2.py3-none-any.whl (893 kB) error 25-Aug-2023 10:32:06 #18 1.503 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 893.5/893.5 kB 57.1 MB/s eta 0:00:00 error 25-Aug-2023 10:32:06 #18 1.547 Collecting GeoAlchemy2==0.4.2 error 25-Aug-2023 10:32:06 #18 1.556 Downloading GeoAlchemy2-0.4.2-py2.py3-none-any.whl (17 kB) error 25-Aug-2023 10:32:06 #18 1.600 Collecting gunicorn==20.0.4 error 25-Aug-2023 10:32:06 #18 1.627 Downloading gunicorn-20.0.4-py2.py3-none-any.whl (77 kB) error 25-Aug-2023 10:32:06 #18 1.634 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 77.9/77.9 kB 17.0 MB/s eta 0:00:00 error 25-Aug-2023 10:32:06 #18 1.662 Collecting itsdangerous==0.24 error 25-Aug-2023 10:32:06 #18 1.670 Downloading itsdangerous-0.24.tar.gz (46 kB) error 25-Aug-2023 10:32:06 #18 1.676 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 46.5/46.5 kB 9.8 MB/s eta 0:00:00 error 25-Aug-2023 10:32:06 #18 1.687 Preparing metadata (setup.py): started error 25-Aug-2023 10:32:06 #18 1.885 Preparing metadata (setup.py): finished with status 'done' error 25-Aug-2023 10:32:06 #18 1.926 Collecting Jinja2==2.9.6 error 25-Aug-2023 10:32:06 #18 1.935 Downloading Jinja2-2.9.6-py2.py3-none-any.whl (340 kB) error 25-Aug-2023 10:32:06 #18 1.947 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 340.7/340.7 kB 40.3 MB/s eta 0:00:00 error 25-Aug-2023 10:32:07 #18 2.351 Collecting numpy error 25-Aug-2023 10:32:07 #18 2.364 Downloading numpy-1.21.6-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (15.7 MB) error 25-Aug-2023 10:32:07 #18 2.570 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 15.7/15.7 MB 67.4 MB/s eta 0:00:00 error 25-Aug-2023 10:32:07 #18 2.896 Collecting pandas==1.0.1 error 25-Aug-2023 10:32:07 #18 2.909 Downloading pandas-1.0.1-cp37-cp37m-manylinux1_x86_64.whl (10.1 MB) error 25-Aug-2023 10:32:08 #18 3.051 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.1/10.1 MB 72.8 MB/s eta 0:00:00 error 25-Aug-2023 10:32:08 #18 3.118 Collecting pep8==1.7.1 error 25-Aug-2023 10:32:08 #18 3.126 Downloading pep8-1.7.1-py2.py3-none-any.whl (41 kB) error 25-Aug-2023 10:32:08 #18 3.133 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 41.5/41.5 kB 8.5 MB/s eta 0:00:00 error 25-Aug-2023 10:32:08 #18 3.173 Collecting pgpasslib==1.1.0 error 25-Aug-2023 10:32:08 #18 3.181 Downloading pgpasslib-1.1.0-py2.py3-none-any.whl (7.8 kB) error 25-Aug-2023 10:32:08 #18 3.294 Collecting psycopg2==2.8.6 error 25-Aug-2023 10:32:08 #18 3.303 Downloading psycopg2-2.8.6.tar.gz (383 kB) error 25-Aug-2023 10:32:08 #18 3.314 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 383.8/383.8 kB 44.7 MB/s eta 0:00:00 error 25-Aug-2023 10:32:08 #18 3.384 Preparing metadata (setup.py): started error 25-Aug-2023 10:32:08 #18 3.630 Preparing metadata (setup.py): finished with status 'done' error 25-Aug-2023 10:32:08 #18 3.675 Collecting py==1.5.3 error 25-Aug-2023 10:32:08 #18 3.683 Downloading py-1.5.3-py2.py3-none-any.whl (84 kB) error 25-Aug-2023 10:32:08 #18 3.691 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 84.9/84.9 kB 15.8 MB/s eta 0:00:00 error 25-Aug-2023 10:32:08 #18 3.798 Collecting pytest==3.0.3 error 25-Aug-2023 10:32:08 #18 3.809 Downloading pytest-3.0.3-py2.py3-none-any.whl (169 kB) error 25-Aug-2023 10:32:08 #18 3.818 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 169.9/169.9 kB 27.8 MB/s eta 0:00:00 error 25-Aug-2023 10:32:08 #18 3.858 Collecting pytest-cache==1.0 error 25-Aug-2023 10:32:08 #18 3.866 Downloading pytest-cache-1.0.tar.gz (16 kB) error 25-Aug-2023 10:32:08 #18 3.878 Preparing metadata (setup.py): started error 25-Aug-2023 10:32:09 #18 4.082 Preparing metadata (setup.py): finished with status 'done' error 25-Aug-2023 10:32:09 #18 4.126 Collecting pytest-pep8==1.0.6 error 25-Aug-2023 10:32:09 #18 4.134 Downloading pytest-pep8-1.0.6.tar.gz (7.3 kB) error 25-Aug-2023 10:32:09 #18 4.143 Preparing metadata (setup.py): started error 25-Aug-2023 10:32:09 #18 4.355 Preparing metadata (setup.py): finished with status 'done' error 25-Aug-2023 10:32:09 #18 4.517 Collecting psycopg2-binary==2.8.6 error 25-Aug-2023 10:32:09 #18 4.529 Downloading psycopg2_binary-2.8.6-cp37-cp37m-manylinux1_x86_64.whl (3.0 MB) error 25-Aug-2023 10:32:09 #18 4.578 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.0/3.0 MB 65.8 MB/s eta 0:00:00 error 25-Aug-2023 10:32:09 #18 4.783 Collecting rasterio==1.1.1 error 25-Aug-2023 10:32:09 #18 4.795 Downloading rasterio-1.1.1-cp37-cp37m-manylinux1_x86_64.whl (15.2 MB) error 25-Aug-2023 10:32:09 #18 4.994 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 15.2/15.2 MB 69.9 MB/s eta 0:00:00 error 25-Aug-2023 10:32:10 #18 5.105 Collecting requests==2.18.4 error 25-Aug-2023 10:32:10 #18 5.113 Downloading requests-2.18.4-py2.py3-none-any.whl (88 kB) error 25-Aug-2023 10:32:10 #18 5.120 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 88.7/88.7 kB 17.5 MB/s eta 0:00:00 error 25-Aug-2023 10:32:10 #18 5.324 Collecting Shapely==1.7a2 error 25-Aug-2023 10:32:10 #18 5.338 Downloading Shapely-1.7a2-cp37-cp37m-manylinux1_x86_64.whl (1.4 MB) error 25-Aug-2023 10:32:10 #18 5.363 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.4/1.4 MB 63.5 MB/s eta 0:00:00 error 25-Aug-2023 10:32:10 #18 5.996 Collecting SQLAlchemy==1.2.6 error 25-Aug-2023 10:32:10 #18 6.007 Downloading SQLAlchemy-1.2.6.tar.gz (5.6 MB) error 25-Aug-2023 10:32:11 #18 6.081 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 5.6/5.6 MB 78.9 MB/s eta 0:00:00 error 25-Aug-2023 10:32:11 #18 6.680 Preparing metadata (setup.py): started error 25-Aug-2023 10:32:11 #18 7.011 Preparing metadata (setup.py): finished with status 'done' error 25-Aug-2023 10:32:11 #18 7.073 Collecting Werkzeug==0.12.2 error 25-Aug-2023 10:32:11 #18 7.082 Downloading Werkzeug-0.12.2-py2.py3-none-any.whl (312 kB) error 25-Aug-2023 10:32:12 #18 7.093 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 313.0/313.0 kB 38.8 MB/s eta 0:00:00 error 25-Aug-2023 10:32:12 #18 7.190 Collecting markupsafe==2.0.1 error 25-Aug-2023 10:32:12 #18 7.197 Downloading MarkupSafe-2.0.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (31 kB) error 25-Aug-2023 10:32:12 #18 7.265 Collecting aniso8601>=0.82 error 25-Aug-2023 10:32:12 #18 7.273 Downloading aniso8601-9.0.1-py2.py3-none-any.whl (52 kB) error 25-Aug-2023 10:32:12 #18 7.279 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 52.8/52.8 kB 11.5 MB/s eta 0:00:00 error 25-Aug-2023 10:32:12 #18 7.314 Collecting six>=1.3.0 error 25-Aug-2023 10:32:12 #18 7.320 Downloading six-1.16.0-py2.py3-none-any.whl (11 kB) error 25-Aug-2023 10:32:12 #18 7.409 Collecting pytz error 25-Aug-2023 10:32:12 #18 7.418 Downloading pytz-2023.3-py2.py3-none-any.whl (502 kB) error 25-Aug-2023 10:32:12 #18 7.431 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 502.3/502.3 kB 50.8 MB/s eta 0:00:00 error 25-Aug-2023 10:32:12 #18 7.645 Collecting pyproj error 25-Aug-2023 10:32:12 #18 7.656 Downloading pyproj-3.2.1-cp37-cp37m-manylinux2010_x86_64.whl (6.3 MB) error 25-Aug-2023 10:32:12 #18 7.743 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 6.3/6.3 MB 74.5 MB/s eta 0:00:00 error 25-Aug-2023 10:32:12 #18 7.895 Collecting fiona error 25-Aug-2023 10:32:12 #18 7.906 Downloading Fiona-1.9.4.post1-cp37-cp37m-manylinux2014_x86_64.whl (16.5 MB) error 25-Aug-2023 10:32:13 #18 8.118 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 16.5/16.5 MB 69.8 MB/s eta 0:00:00 error 25-Aug-2023 10:32:13 #18 8.178 Requirement already satisfied: setuptools>=3.0 in /usr/lib/python3/dist-packages (from gunicorn==20.0.4->-r /root/service/requirements.txt (line 9)) (40.8.0) error 25-Aug-2023 10:32:13 #18 8.246 Collecting python-dateutil>=2.6.1 error 25-Aug-2023 10:32:13 #18 8.254 Downloading python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB) error 25-Aug-2023 10:32:13 #18 8.263 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 247.7/247.7 kB 40.7 MB/s eta 0:00:00 error 25-Aug-2023 10:32:13 #18 8.324 Collecting execnet>=1.1.dev1 error 25-Aug-2023 10:32:13 #18 8.331 Downloading execnet-2.0.2-py3-none-any.whl (37 kB) error 25-Aug-2023 10:32:13 #18 8.429 Collecting affine error 25-Aug-2023 10:32:13 #18 8.435 Downloading affine-2.4.0-py3-none-any.whl (15 kB) error 25-Aug-2023 10:32:13 #18 8.461 Collecting click-plugins error 25-Aug-2023 10:32:13 #18 8.468 Downloading click_plugins-1.1.1-py2.py3-none-any.whl (7.5 kB) error 25-Aug-2023 10:32:13 #18 8.497 Collecting snuggs>=1.4.1 error 25-Aug-2023 10:32:13 #18 8.503 Downloading snuggs-1.4.7-py3-none-any.whl (5.4 kB) error 25-Aug-2023 10:32:13 #18 8.550 Collecting attrs error 25-Aug-2023 10:32:13 #18 8.560 Downloading attrs-23.1.0-py3-none-any.whl (61 kB) error 25-Aug-2023 10:32:13 #18 8.567 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 61.2/61.2 kB 13.6 MB/s eta 0:00:00 error 25-Aug-2023 10:32:13 #18 8.593 Collecting cligj>=0.5 error 25-Aug-2023 10:32:13 #18 8.600 Downloading cligj-0.7.2-py3-none-any.whl (7.1 kB) error 25-Aug-2023 10:32:13 #18 8.690 Collecting urllib3<1.23,>=1.21.1 error 25-Aug-2023 10:32:13 #18 8.699 Downloading urllib3-1.22-py2.py3-none-any.whl (132 kB) error 25-Aug-2023 10:32:13 #18 8.707 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 132.3/132.3 kB 24.8 MB/s eta 0:00:00 error 25-Aug-2023 10:32:13 #18 8.776 Collecting idna<2.7,>=2.5 error 25-Aug-2023 10:32:13 #18 8.785 Downloading idna-2.6-py2.py3-none-any.whl (56 kB) error 25-Aug-2023 10:32:13 #18 8.792 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 56.5/56.5 kB 11.3 MB/s eta 0:00:00 error 25-Aug-2023 10:32:13 #18 8.833 Collecting certifi>=2017.4.17 error 25-Aug-2023 10:32:13 #18 8.840 Downloading certifi-2023.7.22-py3-none-any.whl (158 kB) error 25-Aug-2023 10:32:13 #18 8.848 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 158.3/158.3 kB 29.2 MB/s eta 0:00:00 error 25-Aug-2023 10:32:13 #18 8.875 Collecting chardet<3.1.0,>=3.0.2 error 25-Aug-2023 10:32:13 #18 8.882 Downloading chardet-3.0.4-py2.py3-none-any.whl (133 kB) error 25-Aug-2023 10:32:13 #18 8.890 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 133.4/133.4 kB 24.3 MB/s eta 0:00:00 error 25-Aug-2023 10:32:13 #18 9.050 Collecting pyparsing>=2.1.6 error 25-Aug-2023 10:32:14 #18 9.058 Downloading pyparsing-3.1.1-py3-none-any.whl (103 kB) error 25-Aug-2023 10:32:14 #18 9.065 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 103.1/103.1 kB 21.4 MB/s eta 0:00:00 error 25-Aug-2023 10:32:14 #18 9.208 Collecting importlib-metadata error 25-Aug-2023 10:32:14 #18 9.214 Downloading importlib_metadata-6.7.0-py3-none-any.whl (22 kB) error 25-Aug-2023 10:32:14 #18 9.268 Collecting fiona error 25-Aug-2023 10:32:14 #18 9.278 Downloading Fiona-1.9.4-cp37-cp37m-manylinux2014_x86_64.whl (16.6 MB) error 25-Aug-2023 10:32:14 #18 9.490 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 16.6/16.6 MB 70.4 MB/s eta 0:00:00 error 25-Aug-2023 10:32:14 #18 9.579 Downloading Fiona-1.9.3-cp37-cp37m-manylinux2014_x86_64.whl (16.1 MB) error 25-Aug-2023 10:32:14 #18 9.789 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 16.1/16.1 MB 74.9 MB/s eta 0:00:00 error 25-Aug-2023 10:32:14 #18 9.878 Collecting munch>=2.3.2 error 25-Aug-2023 10:32:14 #18 9.887 Downloading munch-4.0.0-py2.py3-none-any.whl (9.9 kB) error 25-Aug-2023 10:32:14 #18 9.898 Collecting fiona error 25-Aug-2023 10:32:14 #18 9.909 Downloading Fiona-1.9.2-cp37-cp37m-manylinux2014_x86_64.whl (16.1 MB) error 25-Aug-2023 10:32:15 #18 10.10 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 16.1/16.1 MB 77.8 MB/s eta 0:00:00 error 25-Aug-2023 10:32:15 #18 10.18 Downloading Fiona-1.9.1-cp37-cp37m-manylinux2014_x86_64.whl (16.1 MB) error 25-Aug-2023 10:32:15 #18 10.36 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 16.1/16.1 MB 79.3 MB/s eta 0:00:00 error 25-Aug-2023 10:32:15 #18 10.44 Downloading Fiona-1.9.0-cp37-cp37m-manylinux2014_x86_64.whl (17.0 MB) error 25-Aug-2023 10:32:15 #18 10.65 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 17.0/17.0 MB 73.0 MB/s eta 0:00:00 error 25-Aug-2023 10:32:15 #18 10.73 Downloading Fiona-1.8.22-cp37-cp37m-manylinux2014_x86_64.whl (16.7 MB) error 25-Aug-2023 10:32:15 #18 10.95 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 16.7/16.7 MB 75.2 MB/s eta 0:00:00 error 25-Aug-2023 10:32:16 #18 11.12 Collecting typing-extensions>=3.6.4 error 25-Aug-2023 10:32:16 #18 11.12 Downloading typing_extensions-4.7.1-py3-none-any.whl (33 kB) error 25-Aug-2023 10:32:16 #18 11.18 Collecting zipp>=0.5 error 25-Aug-2023 10:32:16 #18 11.18 Downloading zipp-3.15.0-py3-none-any.whl (6.8 kB) error 25-Aug-2023 10:32:16 #18 11.55 Installing collected packages: Werkzeug, urllib3, SQLAlchemy, Shapely, pytz, pgpasslib, pep8, itsdangerous, idna, gdal, click, chardet, aniso8601, zipp, typing-extensions, six, pyparsing, py, psycopg2-binary, psycopg2, numpy, markupsafe, gunicorn, GeoAlchemy2, execnet, cligj, click-plugins, certifi, affine, snuggs, requests, python-dateutil, pytest, pyproj, Jinja2, importlib-metadata, pytest-cache, pandas, munch, Flask, attrs, rasterio, pytest-pep8, Flask-SQLAlchemy, Flask-RESTful, Flask-Cors, fiona, geopandas error 25-Aug-2023 10:32:16 #18 11.73 DEPRECATION: SQLAlchemy is being installed using the legacy 'setup.py install' method, because it does not have a 'pyproject.toml' and the 'wheel' package is not installed. pip 23.1 will enforce this behaviour change. A possible replacement is to enable the '--use-pep517' option. Discussion can be found at https://github.com/pypa/pip/issues/8559 error 25-Aug-2023 10:32:16 #18 11.73 Running setup.py install for SQLAlchemy: started error 25-Aug-2023 10:32:18 #18 13.22 Running setup.py install for SQLAlchemy: finished with status 'done' error 25-Aug-2023 10:32:18 #18 13.54 DEPRECATION: itsdangerous is being installed using the legacy 'setup.py install' method, because it does not have a 'pyproject.toml' and the 'wheel' package is not installed. pip 23.1 will enforce this behaviour change. A possible replacement is to enable the '--use-pep517' option. Discussion can be found at https://github.com/pypa/pip/issues/8559 error 25-Aug-2023 10:32:18 #18 13.54 Running setup.py install for itsdangerous: started error 25-Aug-2023 10:32:18 #18 13.78 Running setup.py install for itsdangerous: finished with status 'done' error 25-Aug-2023 10:32:18 #18 13.85 DEPRECATION: gdal is being installed using the legacy 'setup.py install' method, because it does not have a 'pyproject.toml' and the 'wheel' package is not installed. pip 23.1 will enforce this behaviour change. A possible replacement is to enable the '--use-pep517' option. Discussion can be found at https://github.com/pypa/pip/issues/8559 error 25-Aug-2023 10:32:18 #18 13.85 Running setup.py install for gdal: started error 25-Aug-2023 10:32:51 #18 46.43 Running setup.py install for gdal: finished with status 'done' error 25-Aug-2023 10:32:51 #18 46.94 DEPRECATION: psycopg2 is being installed using the legacy 'setup.py install' method, because it does not have a 'pyproject.toml' and the 'wheel' package is not installed. pip 23.1 will enforce this behaviour change. A possible replacement is to enable the '--use-pep517' option. Discussion can be found at https://github.com/pypa/pip/issues/8559 error 25-Aug-2023 10:32:51 #18 46.94 Running setup.py install for psycopg2: started error 25-Aug-2023 10:32:58 #18 53.53 Running setup.py install for psycopg2: finished with status 'done' error 25-Aug-2023 10:33:01 #18 56.14 DEPRECATION: pytest-cache is being installed using the legacy 'setup.py install' method, because it does not have a 'pyproject.toml' and the 'wheel' package is not installed. pip 23.1 will enforce this behaviour change. A possible replacement is to enable the '--use-pep517' option. Discussion can be found at https://github.com/pypa/pip/issues/8559 error 25-Aug-2023 10:33:01 #18 56.14 Running setup.py install for pytest-cache: started error 25-Aug-2023 10:33:01 #18 56.39 Running setup.py install for pytest-cache: finished with status 'done' error 25-Aug-2023 10:33:04 #18 59.62 DEPRECATION: pytest-pep8 is being installed using the legacy 'setup.py install' method, because it does not have a 'pyproject.toml' and the 'wheel' package is not installed. pip 23.1 will enforce this behaviour change. A possible replacement is to enable the '--use-pep517' option. Discussion can be found at https://github.com/pypa/pip/issues/8559 error 25-Aug-2023 10:33:04 #18 59.62 Running setup.py install for pytest-pep8: started error 25-Aug-2023 10:33:04 #18 59.86 Running setup.py install for pytest-pep8: finished with status 'done' error 25-Aug-2023 10:33:05 #18 60.50 Successfully installed Flask-0.12.2 Flask-Cors-3.0.3 Flask-RESTful-0.3.6 Flask-SQLAlchemy-2.3.2 GeoAlchemy2-0.4.2 Jinja2-2.9.6 SQLAlchemy-1.2.6 Shapely-1.7a2 Werkzeug-0.12.2 affine-2.4.0 aniso8601-9.0.1 attrs-23.1.0 certifi-2023.7.22 chardet-3.0.4 click-6.7 click-plugins-1.1.1 cligj-0.7.2 execnet-2.0.2 fiona-1.8.22 gdal-2.2.2 geopandas-0.5.0 gunicorn-20.0.4 idna-2.6 importlib-metadata-6.7.0 itsdangerous-0.24 markupsafe-2.0.1 munch-4.0.0 numpy-1.21.6 pandas-1.0.1 pep8-1.7.1 pgpasslib-1.1.0 psycopg2-2.8.6 psycopg2-binary-2.8.6 py-1.5.3 pyparsing-3.1.1 pyproj-3.2.1 pytest-3.0.3 pytest-cache-1.0 pytest-pep8-1.0.6 python-dateutil-2.8.2 pytz-2023.3 rasterio-1.1.1 requests-2.18.4 six-1.16.0 snuggs-1.4.7 typing-extensions-4.7.1 urllib3-1.22 zipp-3.15.0 error 25-Aug-2023 10:33:05 #18 60.50 WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv error 25-Aug-2023 10:33:05 #18 60.62 error 25-Aug-2023 10:33:05 #18 60.62 [notice] A new release of pip available: 22.3.1 -> 23.2.1 error 25-Aug-2023 10:33:05 #18 60.62 [notice] To update, run: python3 -m pip install --upgrade pip error 25-Aug-2023 10:33:06 #18 DONE 61.2s error 25-Aug-2023 10:33:06 error 25-Aug-2023 10:33:06 #19 [stage-1 8/9] WORKDIR /root/service error 25-Aug-2023 10:33:06 #19 DONE 0.0s error 25-Aug-2023 10:33:06 error 25-Aug-2023 10:33:06 #20 [stage-1 9/9] COPY . /root/service error 25-Aug-2023 10:33:06 #20 DONE 0.6s error 25-Aug-2023 10:33:06 error 25-Aug-2023 10:33:06 #21 exporting to image error 25-Aug-2023 10:33:06 #21 exporting layers error 25-Aug-2023 10:33:12 #21 exporting layers 5.4s done error 25-Aug-2023 10:33:12 #21 writing image sha256:9746a1a548bf5e047087b22147ecfa3808a40f64addb36219b4a2edfb9e19f84 done error 25-Aug-2023 10:33:12 #21 naming to docker.io/covercrop/service:latest done error 25-Aug-2023 10:33:12 #21 DONE 5.4s simple 25-Aug-2023 10:33:12 Finished task 'docker build' with result: Success simple 25-Aug-2023 10:33:12 Starting task 'docker release' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 25-Aug-2023 10:33:12 Beginning to execute external process for build 'CoverCrop - API - feature-CCROP-424-update-default-experiment-file-for-2023-2024 - Default Job #3 (CCROP-API10-JOB1-3)'\n ... running command line: \n/bin/sh release.sh\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CCROP-API10-JOB1\n build 25-Aug-2023 10:33:12 Pushing from a branch that is not master or develop is not allowed simple 25-Aug-2023 10:33:12 Finished task 'docker release' with result: Success simple 25-Aug-2023 10:33:12 Running post build plugin 'Docker Container Cleanup' simple 25-Aug-2023 10:33:12 Running post build plugin 'NCover Results Collector' simple 25-Aug-2023 10:33:12 Running post build plugin 'Build Results Label Collector' simple 25-Aug-2023 10:33:12 Running post build plugin 'Clover Results Collector' simple 25-Aug-2023 10:33:12 Running post build plugin 'npm Cache Cleanup' simple 25-Aug-2023 10:33:12 Running post build plugin 'Artifact Copier' simple 25-Aug-2023 10:33:12 Finalising the build... simple 25-Aug-2023 10:33:12 Stopping timer. simple 25-Aug-2023 10:33:12 Build CCROP-API10-JOB1-3 completed. simple 25-Aug-2023 10:33:22 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 25-Aug-2023 10:33:22 Running on server: post build plugin 'NCover Results Collector' simple 25-Aug-2023 10:33:22 Running on server: post build plugin 'Build Labeller' simple 25-Aug-2023 10:33:22 Running on server: post build plugin 'Clover Delta Calculator' simple 25-Aug-2023 10:33:22 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 25-Aug-2023 10:33:22 All post build plugins have finished simple 25-Aug-2023 10:33:22 Generating build results summary... simple 25-Aug-2023 10:33:22 Saving build results to disk... simple 25-Aug-2023 10:33:22 Store variable context... simple 25-Aug-2023 10:33:22 Finished building CCROP-API10-JOB1-3.