simple 06-Oct-2017 16:16:56 Build GeoDashboard - Core - feature-GEOD-978-create-links-between-v3-trends-page - Default Job #3 (GEOD-MAIN586-JOB1-3) started building on agent buildserver-1.os.ncsa.edu simple 06-Oct-2017 16:16:56 Remote agent on host buildserver-1.os.ncsa.edu simple 06-Oct-2017 16:16:56 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1 simple 06-Oct-2017 16:16:56 Executing build GeoDashboard - Core - feature-GEOD-978-create-links-between-v3-trends-page - Default Job #3 (GEOD-MAIN586-JOB1-3) simple 06-Oct-2017 16:16:56 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 06-Oct-2017 16:16:56 Updating source code to revision: e176b6aa1e0ad3807769962c78f7c629974e7d28 simple 06-Oct-2017 16:16:56 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1/.git'. simple 06-Oct-2017 16:16:56 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1/.git/ error 06-Oct-2017 16:16:56 Cannot fetch branch '(unresolved) HashAndSource{refName=[null], branch=[feature/GEOD-978-create-links-between-v3-trends-page], hash=[e176b6aa1e0ad3807769962c78f7c629974e7d28]}' from 'ssh://git@opensource.ncsa.illinois.edu:7999/geod/geodashboard.git' to source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'. java.lang.RuntimeException: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh simple 06-Oct-2017 16:16:56 Warning: failed to checkout source code to directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1', trying to recover... simple 06-Oct-2017 16:16:56 Cleaned source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'... simple 06-Oct-2017 16:16:56 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1/.git'. simple 06-Oct-2017 16:16:56 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1/.git/ error 06-Oct-2017 16:16:56 Cannot fetch branch '(unresolved) HashAndSource{refName=[null], branch=[feature/GEOD-978-create-links-between-v3-trends-page], hash=[e176b6aa1e0ad3807769962c78f7c629974e7d28]}' from 'ssh://git@opensource.ncsa.illinois.edu:7999/geod/geodashboard.git' to source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'. java.lang.RuntimeException: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh simple 06-Oct-2017 16:16:56 Updating source code to revision: e176b6aa1e0ad3807769962c78f7c629974e7d28 error 06-Oct-2017 16:16:56 Cannot fetch branch '(unresolved) HashAndSource{refName=[null], branch=[feature/GEOD-978-create-links-between-v3-trends-page], hash=[e176b6aa1e0ad3807769962c78f7c629974e7d28]}' from 'ssh://git@opensource.ncsa.illinois.edu:7999/geod/geodashboard.git' to source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'. java.lang.RuntimeException: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh simple 06-Oct-2017 16:16:56 Warning: failed to checkout source code to directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1', trying to recover... simple 06-Oct-2017 16:16:56 Cleaned source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'... simple 06-Oct-2017 16:16:56 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1/.git'. simple 06-Oct-2017 16:16:56 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1/.git/ error 06-Oct-2017 16:16:56 Cannot fetch branch '(unresolved) HashAndSource{refName=[null], branch=[feature/GEOD-978-create-links-between-v3-trends-page], hash=[e176b6aa1e0ad3807769962c78f7c629974e7d28]}' from 'ssh://git@opensource.ncsa.illinois.edu:7999/geod/geodashboard.git' to source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'. java.lang.RuntimeException: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh simple 06-Oct-2017 16:16:56 Updating source code to revision: e176b6aa1e0ad3807769962c78f7c629974e7d28 error 06-Oct-2017 16:16:56 Cannot fetch branch '(unresolved) HashAndSource{refName=[null], branch=[feature/GEOD-978-create-links-between-v3-trends-page], hash=[e176b6aa1e0ad3807769962c78f7c629974e7d28]}' from 'ssh://git@opensource.ncsa.illinois.edu:7999/geod/geodashboard.git' to source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'. java.lang.RuntimeException: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh simple 06-Oct-2017 16:16:56 Warning: failed to checkout source code to directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1', trying to recover... simple 06-Oct-2017 16:16:56 Cleaned source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'... simple 06-Oct-2017 16:16:56 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1/.git'. simple 06-Oct-2017 16:16:56 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1/.git/ error 06-Oct-2017 16:16:56 Cannot fetch branch '(unresolved) HashAndSource{refName=[null], branch=[feature/GEOD-978-create-links-between-v3-trends-page], hash=[e176b6aa1e0ad3807769962c78f7c629974e7d28]}' from 'ssh://git@opensource.ncsa.illinois.edu:7999/geod/geodashboard.git' to source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'. java.lang.RuntimeException: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh error 06-Oct-2017 16:16:57 Error occurred while running Task 'Checkout Default Repository(1)' of type com.atlassian.bamboo.plugins.vcs:task.vcs.checkout. error 06-Oct-2017 16:16:57 java.lang.RuntimeException: com.atlassian.bamboo.plugins.stash.repository.StashRepositoryException: com.atlassian.bamboo.repository.RepositoryException: Cannot fetch branch '(unresolved) HashAndSource{refName=[null], branch=[feature/GEOD-978-create-links-between-v3-trends-page], hash=[e176b6aa1e0ad3807769962c78f7c629974e7d28]}' from 'ssh://git@opensource.ncsa.illinois.edu:7999/geod/geodashboard.git' to source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'. java.lang.RuntimeException: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.executor.RetryingTaskExecutor.rerun(RetryingTaskExecutor.java:141) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.executor.RetryingTaskExecutor.runTask(RetryingTaskExecutor.java:99) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.executor.RetryingTaskExecutor.retry(RetryingTaskExecutor.java:207) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.executor.RetryingTaskExecutor.retry(RetryingTaskExecutor.java:188) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.vcs.task.VcsCheckoutTask.execute(VcsCheckoutTask.java:121) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.task.TaskExecutorImpl.lambda$executeTasks$3(TaskExecutorImpl.java:284) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.task.TaskExecutorImpl.executeTaskWithPrePostActions(TaskExecutorImpl.java:223) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.task.TaskExecutorImpl.executeTasks(TaskExecutorImpl.java:284) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.task.TaskExecutorImpl.executePreparationTasks(TaskExecutorImpl.java:91) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.build.pipeline.tasks.PrepareBuildTask.call(PrepareBuildTask.java:74) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.v2.build.agent.DefaultBuildAgent.build(DefaultBuildAgent.java:185) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.v2.build.agent.BuildAgentControllerImpl$1.call(BuildAgentControllerImpl.java:120) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.v2.build.agent.BuildAgentControllerImpl$1.call(BuildAgentControllerImpl.java:113) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.variable.CustomVariableContextImpl.withVariableSubstitutor(CustomVariableContextImpl.java:185) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.v2.build.agent.BuildAgentControllerImpl.waitAndPerformBuild(BuildAgentControllerImpl.java:113) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.v2.build.agent.DefaultBuildAgent$1.run(DefaultBuildAgent.java:126) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.utils.BambooRunnables$1.run(BambooRunnables.java:47) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.security.ImpersonationHelper.runWith(ImpersonationHelper.java:26) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.security.ImpersonationHelper.runWithSystemAuthority(ImpersonationHelper.java:17) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.security.ImpersonationHelper$1.run(ImpersonationHelper.java:41) error 06-Oct-2017 16:16:57 at java.lang.Thread.run(Thread.java:745) error 06-Oct-2017 16:16:57 Caused by: com.atlassian.bamboo.plugins.stash.repository.StashRepositoryException: com.atlassian.bamboo.repository.RepositoryException: Cannot fetch branch '(unresolved) HashAndSource{refName=[null], branch=[feature/GEOD-978-create-links-between-v3-trends-page], hash=[e176b6aa1e0ad3807769962c78f7c629974e7d28]}' from 'ssh://git@opensource.ncsa.illinois.edu:7999/geod/geodashboard.git' to source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'. java.lang.RuntimeException: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.stash.v2.BitbucketServerWorkingCopyManager.retrieveSourceCode(BitbucketServerWorkingCopyManager.java:72) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.vcs.task.VcsCheckoutTask.fillWorkingDirFromVcs(VcsCheckoutTask.java:204) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.vcs.task.VcsCheckoutTask.access$000(VcsCheckoutTask.java:54) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.vcs.task.VcsCheckoutTask$1.call(VcsCheckoutTask.java:124) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.vcs.task.VcsCheckoutTask$1.call(VcsCheckoutTask.java:121) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.executor.RetryingTaskExecutor.rerun(RetryingTaskExecutor.java:112) error 06-Oct-2017 16:16:57 ... 20 more error 06-Oct-2017 16:16:57 Caused by: com.atlassian.bamboo.repository.RepositoryException: Cannot fetch branch '(unresolved) HashAndSource{refName=[null], branch=[feature/GEOD-978-create-links-between-v3-trends-page], hash=[e176b6aa1e0ad3807769962c78f7c629974e7d28]}' from 'ssh://git@opensource.ncsa.illinois.edu:7999/geod/geodashboard.git' to source directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/GEOD-MAIN586-JOB1'. java.lang.RuntimeException: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.NativeGitOperationHelper.fetch(NativeGitOperationHelper.java:446) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.v2.GitWorkingCopyManager.checkout(GitWorkingCopyManager.java:233) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.v2.GitWorkingCopyManager.retrieveSourceCode(GitWorkingCopyManager.java:56) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.stash.v2.BitbucketServerWorkingCopyManager.retrieveSourceCode(BitbucketServerWorkingCopyManager.java:68) error 06-Oct-2017 16:16:57 ... 25 more error 06-Oct-2017 16:16:57 Caused by: com.google.common.util.concurrent.UncheckedExecutionException: java.lang.RuntimeException: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache$Segment.get(LocalCache.java:2203) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache.get(LocalCache.java:3937) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache.getOrLoad(LocalCache.java:3941) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache$LocalLoadingCache.get(LocalCache.java:4824) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.collections.AlwaysInvalidatingCacheDecorator.get(AlwaysInvalidatingCacheDecorator.java:64) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.collections.AlwaysInvalidatingCacheDecorator.getUnchecked(AlwaysInvalidatingCacheDecorator.java:125) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.util.CallableResultCache.call(CallableResultCache.java:141) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.NativeGitOperationHelper.getRemoteRefs(NativeGitOperationHelper.java:521) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.NativeGitOperationHelper.resolveBranch(NativeGitOperationHelper.java:473) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.NativeGitOperationHelper.getRefsToFetch(NativeGitOperationHelper.java:463) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.NativeGitOperationHelper.fetch(NativeGitOperationHelper.java:424) error 06-Oct-2017 16:16:57 ... 28 more error 06-Oct-2017 16:16:57 Caused by: java.lang.RuntimeException: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.GitCommandProcessor.getSshScriptToRun(GitCommandProcessor.java:160) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.GitCommandProcessor.createRemoteCommandBuilder(GitCommandProcessor.java:599) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.GitCommandProcessor.getRemoteRefs(GitCommandProcessor.java:476) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.NativeGitOperationHelper.lambda$getRemoteRefs$0(NativeGitOperationHelper.java:513) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.util.CallableResultCache$1.load(CallableResultCache.java:38) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.util.CallableResultCache$1.load(CallableResultCache.java:34) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache$LoadingValueReference.loadFuture(LocalCache.java:3527) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache$Segment.loadSync(LocalCache.java:2319) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache$Segment.lockedGetOrLoad(LocalCache.java:2282) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache$Segment.get(LocalCache.java:2197) error 06-Oct-2017 16:16:57 ... 38 more error 06-Oct-2017 16:16:57 Caused by: java.io.IOException: Unable to delete already existing file: /tmp/bamboo-ssh.9900a68e.sh error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.util.SecureTemporaryFiles.createSecureTempFile(SecureTemporaryFiles.java:239) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.util.SecureTemporaryFiles.create(SecureTemporaryFiles.java:197) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.util.SharedTemporaryFiles.createTempFile(SharedTemporaryFiles.java:144) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.util.SharedTemporaryFiles.access$200(SharedTemporaryFiles.java:19) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.util.SharedTemporaryFiles$1.load(SharedTemporaryFiles.java:139) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.util.SharedTemporaryFiles$1.load(SharedTemporaryFiles.java:136) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache$LoadingValueReference.loadFuture(LocalCache.java:3527) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache$Segment.loadSync(LocalCache.java:2319) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache$Segment.lockedGetOrLoad(LocalCache.java:2282) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache$Segment.get(LocalCache.java:2197) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache.get(LocalCache.java:3937) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache.getOrLoad(LocalCache.java:3941) error 06-Oct-2017 16:16:57 at com.google.common.cache.LocalCache$LocalLoadingCache.get(LocalCache.java:4824) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.util.SharedTemporaryFiles.create(SharedTemporaryFiles.java:189) error 06-Oct-2017 16:16:57 at com.atlassian.bamboo.plugins.git.GitCommandProcessor.getSshScriptToRun(GitCommandProcessor.java:157) error 06-Oct-2017 16:16:57 ... 47 more error 06-Oct-2017 16:16:57 Failed to prepare the build 'GeoDashboard - Core - feature-GEOD-978-create-links-between-v3-trends-page - Default Job #3 (GEOD-MAIN586-JOB1-3)' simple 06-Oct-2017 16:16:57 Running on server: post build plugin 'NCover Results Collector' simple 06-Oct-2017 16:16:57 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 06-Oct-2017 16:16:57 Running on server: post build plugin 'Clover Delta Calculator' simple 06-Oct-2017 16:16:57 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 06-Oct-2017 16:16:57 All post build plugins have finished simple 06-Oct-2017 16:16:57 Generating build results summary... simple 06-Oct-2017 16:16:57 Saving build results to disk... simple 06-Oct-2017 16:16:57 Logging substituted variables... simple 06-Oct-2017 16:16:57 Indexing build results... simple 06-Oct-2017 16:16:57 Finished building GEOD-MAIN586-JOB1-3.