simple	20-May-2015 09:43:54	Build MMDB - Medici 1 GWT - mentions - default #7 (MMDB-MEDICI73-JOB1-7) started building on agent buildserver-1.ncsa.illinois.edu
simple	20-May-2015 09:43:54	Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1
simple	20-May-2015 09:43:54	Executing build MMDB - Medici 1 GWT - mentions - default #7 (MMDB-MEDICI73-JOB1-7)
simple	20-May-2015 09:43:54	Starting task 'Source Code Checkout' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
simple	20-May-2015 09:43:54	Build always requires a clean checkout
simple	20-May-2015 09:43:54	Cleaning build directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt'
simple	20-May-2015 09:43:54	Build always requires a clean checkout
simple	20-May-2015 09:43:54	Cleaning build directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet'
simple	20-May-2015 09:43:55	Updating source code to revision: 284ba4924ae9808d86b6c1e9246619ae20e8c7db
simple	20-May-2015 09:43:55	Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/.git'.
simple	20-May-2015 09:43:55	Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/.git/
simple	20-May-2015 09:43:56	Fetching 'refs/heads/mentions' from 'https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web.git'. Will try to do a shallow fetch.
simple	20-May-2015 09:44:01	From https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web
simple	20-May-2015 09:44:01	 * [new branch]      mentions   -> mentions
simple	20-May-2015 09:44:01	Checking out revision 284ba4924ae9808d86b6c1e9246619ae20e8c7db.
simple	20-May-2015 09:44:02	Switched to branch 'mentions'
simple	20-May-2015 09:44:02	Updated source code to revision: 284ba4924ae9808d86b6c1e9246619ae20e8c7db
simple	20-May-2015 09:44:02	Updating source code to revision: 0b0c4e05e8f4518f20b5ff7ffd272304deeab48e
simple	20-May-2015 09:44:02	Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/.git'.
simple	20-May-2015 09:44:02	Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/.git/
simple	20-May-2015 09:44:02	Fetching 'refs/heads/master' from 'https://opensource.ncsa.illinois.edu/stash/scm/cbi/cet.git'. Will try to do a shallow fetch.
simple	20-May-2015 09:44:09	From https://opensource.ncsa.illinois.edu/stash/scm/cbi/cet
simple	20-May-2015 09:44:09	 * [new branch]      master     -> master
simple	20-May-2015 09:44:10	Checking out revision 0b0c4e05e8f4518f20b5ff7ffd272304deeab48e.
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simple	20-May-2015 09:44:15	Checking out files: 100% (2937/2937), done.
simple	20-May-2015 09:44:15	Already on 'master'
simple	20-May-2015 09:44:15	Updated source code to revision: 0b0c4e05e8f4518f20b5ff7ffd272304deeab48e
simple	20-May-2015 09:44:15	Finished task 'Source Code Checkout' with result: Success
simple	20-May-2015 09:44:15	Running pre-build action: VCS Version Collector
command	20-May-2015 09:44:15	Substituting variable: ${bamboo.repository.branch.name} with mentions
command	20-May-2015 09:44:15	Substituting variable: ${bamboo.buildNumber} with 7
simple	20-May-2015 09:44:15	Starting task 'Web App' of type 'com.atlassian.bamboo.plugins.ant:task.builder.ant'
command	20-May-2015 09:44:15	Beginning to execute external process for build 'MMDB - Medici 1 GWT - mentions - default #7 (MMDB-MEDICI73-JOB1-7)'\n ... running command line: \n/home/bamboo/apache-ant-1.9.4/bin/ant -Djava.io.tmpdir=/tmp/MMDB-MEDICI73-JOB1 bamboo -Dbamboo.version="mentions#7"\n ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web\n ... using extra environment variables: \nbamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build\nbamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_05\nbamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41\nbamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm\nbamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60\nJAVA_HOME=/home/bamboo/jdk1.7.0_60\nbamboo_repository_18841602_previous_revision_number=0b0c4e05e8f4518f20b5ff7ffd272304deeab48e\nbamboo_planRepository_type=git\nbamboo_shortPlanName=mentions\nbamboo_capability_system_software_mongo=/usr/bin/mongo\nbamboo_planKey=MMDB-MEDICI73\nbamboo_repository_74514433_git_branch=mentions\nbamboo_repository_74514433_git_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web.git\nbamboo_repository_git_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web.git\nbamboo_planRepository_1_branchName=mentions\nbamboo_repository_18841602_git_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/cbi/cet.git\nbamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster\nbamboo_shortPlanKey=MEDICI73\nbamboo_shortJobKey=JOB1\nbamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1\nbamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt\nbamboo_planRepository_1_branch=mentions\nbamboo_repository_revision_number=284ba4924ae9808d86b6c1e9246619ae20e8c7db\nbamboo_repository_18841602_name=cet\nbamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.2.1\nbamboo_planRepository_2_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/cbi/cet.git\nbamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs\nbamboo_repository_74514433_revision_number=284ba4924ae9808d86b6c1e9246619ae20e8c7db\nbamboo_planName=MMDB - Medici 1 GWT - mentions\nbamboo_repository_74514433_branch_name=mentions\nbamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/MMDB-MEDICI73-JOB1-7\nbamboo_capability_system_jdk_JDK_1_7_0_60=/home/bamboo/jdk1.7.0_60\nbamboo_buildResultKey=MMDB-MEDICI73-JOB1-7\nbamboo_planRepository_revision=284ba4924ae9808d86b6c1e9246619ae20e8c7db\nbamboo_repository_74514433_name=medici-gwt-web\nbamboo_repository_git_username=\nbamboo_repository_previous_revision_number=a7df7bed5b5c6dcccef7fe26221c533a0cbbf1b9\nbamboo_buildKey=MMDB-MEDICI73-JOB1\nbamboo_capability_system_git_executable=/usr/bin/git\nbamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1\nbamboo_repository_18841602_revision_number=0b0c4e05e8f4518f20b5ff7ffd272304deeab48e\nbamboo_repository_18841602_git_username=\nbamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node\nbamboo_planRepository_2_previousRevision=0b0c4e05e8f4518f20b5ff7ffd272304deeab48e\nbamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir\nbamboo_buildPlanName=MMDB - Medici 1 GWT - mentions - default\nbamboo_repository_name=cet\nbamboo_planRepository_2_revision=0b0c4e05e8f4518f20b5ff7ffd272304deeab48e\nbamboo_repository_74514433_git_username=\nbamboo_repository_18841602_git_branch=master\nbamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/MMDB-MEDICI73-JOB1-7\nbamboo_planRepository_1_revision=284ba4924ae9808d86b6c1e9246619ae20e8c7db\nbamboo_repository_git_branch=mentions\nbamboo_planRepository_2_branch=master\nbamboo_planRepository_1_previousRevision=a7df7bed5b5c6dcccef7fe26221c533a0cbbf1b9\nbamboo_planRepository_1_type=git\nbamboo_repository_18841602_branch_name=master\nbamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt\nbamboo_planRepository_1_name=medici-gwt-web\nbamboo_repository_74514433_previous_revision_number=a7df7bed5b5c6dcccef7fe26221c533a0cbbf1b9\nbamboo_planRepository_branch=mentions\nbamboo_planRepository_2_branchName=master\nbamboo_planRepository_username=\nbamboo_planRepository_branchName=mentions\nbamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.7.0_60\nbamboo_capability_system_os=linux\nbamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1\nbamboo_shortJobName=default\nbamboo_repository_branch_name=mentions\nbamboo_agentId=52559873\nbamboo_planRepository_previousRevision=a7df7bed5b5c6dcccef7fe26221c533a0cbbf1b9\nbamboo_planRepository_1_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web.git\nbamboo_planRepository_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web.git\nbamboo_planRepository_2_type=git\nANT_HOME=/home/bamboo/apache-ant-1.9.4\nbamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh\nbamboo_planRepository_2_name=cet\nbamboo_planRepository_1_username=\nbamboo_planRepository_2_username=\nbamboo_planRepository_name=medici-gwt-web\nbamboo_buildNumber=7\nbamboo_capability_system_hostname=buildserver-1\nbamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs\nbamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl\nbamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4\nbamboo_buildTimeStamp=2015-05-20T09:43:54.009-05:00\nPATH=/home/bamboo/jdk1.7.0_60/bin:/home/bamboo/jdk1.7.0_60/bin:/home/bamboo/node-v0.10.28/bin:/usr/bin:/bin\n
build	20-May-2015 09:44:15	Buildfile: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/build.xml
build	20-May-2015 09:44:16	
build	20-May-2015 09:44:16	cetbean:
build	20-May-2015 09:44:16	    [mkdir] Created dir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
build	20-May-2015 09:44:16	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/build.xml:85: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds
build	20-May-2015 09:44:16	    [javac] Compiling 65 source files to /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
build	20-May-2015 09:44:16	    [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.5
build	20-May-2015 09:44:17	    [javac] 1 warning
build	20-May-2015 09:44:17	      [jar] Building jar: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/lib/cet-bean.jar
build	20-May-2015 09:44:17	   [delete] Deleting directory /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
build	20-May-2015 09:44:17	    [mkdir] Created dir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
build	20-May-2015 09:44:17	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/build.xml:100: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds
build	20-May-2015 09:44:17	    [javac] Compiling 97 source files to /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
build	20-May-2015 09:44:17	    [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.5
build	20-May-2015 09:44:18	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/SHAPasswordDigest.java:48: warning: BASE64Encoder is internal proprietary API and may be removed in a future release
build	20-May-2015 09:44:18	    [javac] import sun.misc.BASE64Encoder;
build	20-May-2015 09:44:18	    [javac]                ^
build	20-May-2015 09:44:19	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/TagEventBeanUtil.java:72: warning: [deprecation] encode(String) in URLEncoder has been deprecated
build	20-May-2015 09:44:19	    [javac]         return Resource.uriRef("tag:cet.ncsa.uiuc.edu,2008:/tag#" + URLEncoder.encode(tag)); //$NON-NLS-1$
build	20-May-2015 09:44:19	    [javac]                                                                               ^
build	20-May-2015 09:44:19	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/VisualizationBeanUtil.java:73: warning: [deprecation] clone(T,PersonBean) in TupeloBeanUtil has been deprecated
build	20-May-2015 09:44:19	    [javac]     public VisualizationBean clone(VisualizationBean bean, PersonBean creator)
build	20-May-2015 09:44:19	    [javac]                              ^
build	20-May-2015 09:44:19	    [javac]   where T is a type-variable:
build	20-May-2015 09:44:19	    [javac]     T extends CETBean declared in class TupeloBeanUtil
build	20-May-2015 09:44:19	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/VisualizationBeanUtil.java:83: warning: [deprecation] clone(ConfigurationBean,PersonBean) in ConfigurationBeanUtil has been deprecated
build	20-May-2015 09:44:19	    [javac]             ConfigurationBean configuration = cbu.clone(bean.getConfiguration(), creator);
build	20-May-2015 09:44:19	    [javac]                                                  ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/RBAC.java:442: warning: [deprecation] ADMIN_ROLE in MMDB has been deprecated
build	20-May-2015 09:44:20	    [javac]             if (!t.getObject().equals(MMDB.ADMIN_ROLE) && !t.getObject().equals(MMDB.REGULAR_MEMBER_ROLE)) {
build	20-May-2015 09:44:20	    [javac]                                           ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/RBAC.java:442: warning: [deprecation] REGULAR_MEMBER_ROLE in MMDB has been deprecated
build	20-May-2015 09:44:20	    [javac]             if (!t.getObject().equals(MMDB.ADMIN_ROLE) && !t.getObject().equals(MMDB.REGULAR_MEMBER_ROLE)) {
build	20-May-2015 09:44:20	    [javac]                                                                                     ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/RBAC.java:452: warning: [deprecation] ADMIN_ROLE in MMDB has been deprecated
build	20-May-2015 09:44:20	    [javac]         createRole(MMDB.ADMIN_ROLE, "Administrator");
build	20-May-2015 09:44:20	    [javac]                        ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/RBAC.java:453: warning: [deprecation] REGULAR_MEMBER_ROLE in MMDB has been deprecated
build	20-May-2015 09:44:20	    [javac]         createRole(MMDB.REGULAR_MEMBER_ROLE, "Member");
build	20-May-2015 09:44:20	    [javac]                        ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/SHAPasswordDigest.java:78: warning: BASE64Encoder is internal proprietary API and may be removed in a future release
build	20-May-2015 09:44:20	    [javac]         BASE64Encoder encoder = new BASE64Encoder();
build	20-May-2015 09:44:20	    [javac]         ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/SHAPasswordDigest.java:78: warning: BASE64Encoder is internal proprietary API and may be removed in a future release
build	20-May-2015 09:44:20	    [javac]         BASE64Encoder encoder = new BASE64Encoder();
build	20-May-2015 09:44:20	    [javac]                                     ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowStepDAO.java:28: warning: [deprecation] Rdf in Vocabulary has been deprecated
build	20-May-2015 09:44:20	    [javac]         uf.addPattern(new Pattern("data", Vocabulary.Rdf.TYPE, Cyberintegrator.PARAMETER)); //$NON-NLS-1$
build	20-May-2015 09:44:20	    [javac]                                                     ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowStepDAO.java:40: warning: [deprecation] Rdf in Vocabulary has been deprecated
build	20-May-2015 09:44:20	    [javac]         uf.addPattern(new Pattern("data", Vocabulary.Rdf.TYPE, Cyberintegrator.PARAMETER)); //$NON-NLS-1$
build	20-May-2015 09:44:20	    [javac]                                                     ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowStepDAO.java:58: warning: [deprecation] Rdf in Vocabulary has been deprecated
build	20-May-2015 09:44:20	    [javac]         uf.addPattern(new Pattern("input", Vocabulary.Rdf.TYPE, Cyberintegrator.DATASET)); //$NON-NLS-1$
build	20-May-2015 09:44:20	    [javac]                                                      ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowStepDAO.java:82: warning: [deprecation] Rdf in Vocabulary has been deprecated
build	20-May-2015 09:44:20	    [javac]         uf.addPattern(new Pattern("output", Vocabulary.Rdf.TYPE, Cyberintegrator.DATASET)); //$NON-NLS-1$
build	20-May-2015 09:44:20	    [javac]                                                       ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowToolDataDAO.java:26: warning: [deprecation] Rdf in Vocabulary has been deprecated
build	20-May-2015 09:44:20	    [javac]         uf.addPattern(new Pattern("data", Vocabulary.Rdf.TYPE, Cyberintegrator.TOOL_DATA)); //$NON-NLS-1$
build	20-May-2015 09:44:20	    [javac]                                                     ^
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowToolDataDAO.java:41: warning: [deprecation] Rdf in Vocabulary has been deprecated
build	20-May-2015 09:44:20	    [javac]         uf.addPattern(new Pattern("data", Vocabulary.Rdf.TYPE, Cyberintegrator.TOOL_DATA)); //$NON-NLS-1$
build	20-May-2015 09:44:20	    [javac]                                                     ^
build	20-May-2015 09:44:20	    [javac] 17 warnings
build	20-May-2015 09:44:20	      [jar] Building jar: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/lib/cet-bean-tupelo.jar
build	20-May-2015 09:44:20	   [delete] Deleting directory /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
build	20-May-2015 09:44:20	
build	20-May-2015 09:44:20	updateversion:
build	20-May-2015 09:44:20	
build	20-May-2015 09:44:20	clean:
build	20-May-2015 09:44:20	
build	20-May-2015 09:44:20	compile:
build	20-May-2015 09:44:20	    [mkdir] Created dir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/classes
build	20-May-2015 09:44:20	    [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/build.xml:126: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds
build	20-May-2015 09:44:21	    [javac] Compiling 580 source files to /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/classes
build	20-May-2015 09:44:26	    [javac] Note: Some input files use unchecked or unsafe operations.
build	20-May-2015 09:44:26	    [javac] Note: Recompile with -Xlint:unchecked for details.
build	20-May-2015 09:44:26	
build	20-May-2015 09:44:26	gwtc:
build	20-May-2015 09:44:27	     [java] Compiling module edu.illinois.ncsa.mmdb.web.MMDB
build	20-May-2015 09:45:13	     [java]    Compiling 6 permutations
build	20-May-2015 09:45:13	     [java]       Compiling permutation 0...
build	20-May-2015 09:45:24	     [java]       Compiling permutation 1...
build	20-May-2015 09:45:33	     [java]       Compiling permutation 2...
build	20-May-2015 09:45:40	     [java]       Compiling permutation 3...
build	20-May-2015 09:45:47	     [java]       Compiling permutation 4...
build	20-May-2015 09:45:54	     [java]       Compiling permutation 5...
build	20-May-2015 09:46:02	     [java]    Compile of permutations succeeded
build	20-May-2015 09:46:03	     [java] Linking into /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/mmdb
build	20-May-2015 09:46:03	     [java]    Link succeeded
build	20-May-2015 09:46:03	     [java]    Compilation succeeded -- 95.543s
build	20-May-2015 09:46:04	     [java] Compiling module edu.illinois.ncsa.mmdb.web.Embed
build	20-May-2015 09:46:32	     [java]    Compiling 6 permutations
build	20-May-2015 09:46:32	     [java]       Compiling permutation 0...
build	20-May-2015 09:46:38	     [java]       Compiling permutation 1...
build	20-May-2015 09:46:42	     [java]       Compiling permutation 2...
build	20-May-2015 09:46:45	     [java]       Compiling permutation 3...
build	20-May-2015 09:46:48	     [java]       Compiling permutation 4...
build	20-May-2015 09:46:52	     [java]       Compiling permutation 5...
build	20-May-2015 09:46:55	     [java]    Compile of permutations succeeded
build	20-May-2015 09:46:55	     [java] Linking into /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/embed
build	20-May-2015 09:46:55	     [java]    Link succeeded
build	20-May-2015 09:46:55	     [java]    Compilation succeeded -- 51.457s
build	20-May-2015 09:46:55	
build	20-May-2015 09:46:55	resources:
build	20-May-2015 09:46:55	     [copy] Copying 6 files to /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/classes
build	20-May-2015 09:46:55	     [copy] Copying 1 file to /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/classes
build	20-May-2015 09:46:55	
build	20-May-2015 09:46:55	war:
build	20-May-2015 09:46:56	      [zip] Building zip: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI73-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/medici.war
build	20-May-2015 09:47:00	
build	20-May-2015 09:47:00	bamboo:
build	20-May-2015 09:47:00	
build	20-May-2015 09:47:00	BUILD SUCCESSFUL
build	20-May-2015 09:47:00	Total time: 2 minutes 44 seconds
simple	20-May-2015 09:47:00	Finished task 'Web App' with result: Success
simple	20-May-2015 09:47:00	Running post build plugin 'Artifact Copier'
simple	20-May-2015 09:47:00	Publishing an artifact: medici.war
simple	20-May-2015 09:47:00	Finished publishing of artifact Job artifact: [medici.war], pattern: [medici.war] anchored at: [mmdb-gwt/edu.illinois.ncsa.mmdb.web] in 0s
simple	20-May-2015 09:47:00	Running post build plugin 'npm Cache Cleanup'
simple	20-May-2015 09:47:00	Running post build plugin 'NCover Results Collector'
simple	20-May-2015 09:47:00	Running post build plugin 'Clover Results Collector'
simple	20-May-2015 09:47:00	Running post build plugin 'Docker Container Cleanup'
simple	20-May-2015 09:47:00	Finalising the build...
simple	20-May-2015 09:47:00	Stopping timer.
simple	20-May-2015 09:47:00	Build MMDB-MEDICI73-JOB1-7 completed.
simple	20-May-2015 09:47:01	Running on server: post build plugin 'Clover Delta Calculator'
simple	20-May-2015 09:47:01	Running on server: post build plugin 'Build Hanging Detection Configuration'
simple	20-May-2015 09:47:01	Running on server: post build plugin 'NCover Results Collector'
simple	20-May-2015 09:47:01	Running on server: post build plugin 'Maven Dependencies Postprocessor'
simple	20-May-2015 09:47:01	All post build plugins have finished
simple	20-May-2015 09:47:01	Generating build results summary...
simple	20-May-2015 09:47:01	Saving build results to disk...
simple	20-May-2015 09:47:01	Indexing build results...
simple	20-May-2015 09:47:01	Finished building MMDB-MEDICI73-JOB1-7.