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Who

Planned - Monday

Accomplished - Friday

Benjamin Galewsky

Brown Dog - Clusterman Sprint!
NDS
- 1.8 Deployments
- Brown Dog pd.py application

IN-Core
- Getting familiar with IN-Core
Clowder
- Setting up meeting to figure out further implementation of SMM with Clowder
SMM
- TBD

Christopher Navarro

Cover Crop
- Code review
- Finalize what's needed for new demo video
Ergo
- Answer user questions
IN-Core
- Start next sprint
- Work on datawolf storage refactoring
- Add incore-dev build to Jenkins so we can deploy from dev branch
- Help with onboarding of new hire
General - release datawolf 4.2

Htut Khine Htay Win

Indira Gutierrez Polo

GLM

Run Glenda parser in dev
Address bugs in detail page

In-Core

Refactoring building portfolio analyses
Update the front end for v2 to match api refactoring
Start looking into new analyses.

GLM

Run Glenda parser in dev
Address bugs in detail page

In-Core

Refactoring building portfolio analyses
Update the front end for v2 to match api refactoring (some work)
Start looking into new analyses.

SMU

Clowder Paper

Add new logic to manipulate NA value for GeneSet_Characterization_Pipeline
Create new docker image for Data_Cleanup_Pipeline
Add new function to Signature_Analysis_Pipeline to create new output file which indicates the best match for each gene
Search for solutions of user data/file backup for JupyterHub

Added new logic to manipulate NA value for GeneSet_Characterization_Pipeline
Created new docker image for Data_Cleanup_Pipeline
Add new function to Signature_Analysis_Pipeline to create new output file which indicates the best match for each gene(partially done)
Searched for solutions of user data/file backup for JupyterHub, still in discussion

CSSIs
BD Outreach
HR

CSSIs
BD Outreach
HR

Clowder paper
Meetings for potential collaborations
Clowder refactoring

Clowder paper is going very slow. Made outline. Assigned contributors. Need to write.
Meetings going well, just too many.
Clowder refactoring happened in one meeting. Too little time for this. Problem.

Marcus Slavenas

gltg
- upgrade gltg server (scheduled wednesday)
vbd
- model workflow

gltg
- all 4 systems up
vbd
- fortran bug fixes
- set up clowder instance

Maxwell Burnette

complete first draft of PEARC18 paper
EOH prep finalization
meantemp & canopycover traits processing starting Tuesday
stability planning

PEARC 70% complete, plan to finish during Monday Nebula outage
EOH prep
BETYdb meantemp traits loaded
ECSS allocation planning

Michal Ondrejcek

NDS
- Plan for Workbench Beta redeploy, e-mail beta users
- Fix/audit leftover deploy-tools bugs
- Jira
  server JIRA
  serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
  key NDS-1177
- Jira
  server JIRA
  serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
  key NDS-1219
KnowEnG
- Continue trying to submit jobs to the Kubernetes API
Crops in Silico
- Wire up the last few missing fields to produce real "models" YAML for running in cisrun

NDS
- Sent out maintenance e-mail to beta users
- Jira
  server JIRA
  serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
  key NDS-1177
- Jira
  server JIRA
  serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
  key NDS-1219
KnowEnG
- Successfully submitting jobs, dependency job finishes successfully, but main job still failing
Crops in Silico
- Wired up the last few missing fields (driver / args)

Michelle Pitcel

GLTG
- Priority:
  - Jira
    server JIRA
    columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
    serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
    key GLGVO-415
- If Time:
  - Jira
    server JIRA
    columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
    serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
    key GLGVO-85
  - Jira
    server JIRA
    columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
    serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
    key GLGVO-378
IMLCZO
- Priority:
  - Jira
    server JIRA
    columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
    serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
    key IMLCZO-220
  - Re-run Parser for Flux Tower
  - Re-run Parser for Allerton non-Decagon
- If Time:
  - Jira
    server JIRA
    columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
    serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
    key GEOD-1063
  - Jira
    server JIRA
    columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
    serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
    key IMLCZO-217

GLTG
- Jira
  showSummary false
  server JIRA
  columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
  serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
  key GLGVO-415
IMLCZO
- Re-ran Parser for Flux Tower
- Re-ran Parser for Allerton non-Decagon
- Jira
  showSummary false
  server JIRA
  columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
  serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca
  key IMLCZO-220

KnowEnG

Update Terms of Use
Hubzero Portal UI update

Synjenta

Setup

KnowEnG

Update Terms of Use
Hubzero Portal UI update

Synjenta

Setup

Sandeep Puthanveetil Satheesan

Shannon Bradley

New Hire
HR Duties
Reports
Brown Dog Tasks
EOH
more to come

BD
- add choose tool for clusterman
CC
- add weather to workflow
GLM
- add USGS to dev machine.
- add beartoken to geostreams-api

Work on up pycsw insert automation
Create webdav metadata import python script
Check out flooding FORTRAN code if it is delivered
Create incore2-notebook vm

Worked on webdav data dump python script based on new API change
Worked on webdav metadata dump python script
Refactored data repository's GUID creation method to speed up the process
Refactored table and shapefile join method to speed up the process
Tested PyCSW keyword search

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