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- (Gregory Jansen, Rui Liu) Developer downloads BrownDog development environment in docker container (in dockerhub, link on BD webpage)
Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-956 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-957 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-958 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-959 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-960 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-1009 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-1017 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-1007 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-1016 - Contains running Clowder instance, Polyglot instance, basic development tools, mabye even an IDE configured and ready to go
- Contains a bare-bones extractor ready to be modified for a new tool (with comments suggesting where to edit, in various languages e.g. python, C++, Java, ..., and docker sample file)
- Contains a bare-bones converter ready to be modified for a new tool (with comments suggesting where to edit, in various languages e.g. bash, bat, ahk, python, ..., and docker sample file)
- (Done) Polyglot changes from redirecting to SS to downloading and serving converted files to users' "/file/" requests, to support 1 Pol + multi SS docker containers on the same VM.
- (Done - Rui provided the files/images.) docker-compose.yml file, docker images for Polyglot server + 2 different SS to work together on the same VM.
- (Gregory Jansen, Smruti Padhy) Developer installs tool, creates BrownDog interface script(s)
- Adds sample input file(s)
- Example extractor: imagemagick edge detector
- Example converter: imagemagick jpg to ico converter
- (Gregory Jansen, Smruti Padhy)Developer creates dockerfile
- For extractors this should contain only the tool, its dependencies, and the extractor
- For converters this should contain the basic Polyglot setup, ideally only the Software Server, the tool, its dependencies, and the converter interface script
Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-983
- (Rui Liu, Inna Zharnitsky) Developer submits tool to Tools Catalog (using BrownDog account)
Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-961 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-962 - (Done) BrownDog interface script(s), dockerfile, sample input, sample output
- TODO: Documentation on how to add tool to Tools Catalog
- (Done) Through web interface
- Through script in development environment (probably the ideal way)
Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-962
- (Inna Zharnitsky, Marcus Slavenas) Admin reviews and tests tool by pressing button which deploys tool in a separate Clowder/Polyglot sandbox, passes in the given input file, and checks the obtained output file against what is provided
- Manual review source code and docker file
- If ok, reviewer submits tool for testing from tool catalog ui
Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-968 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-969 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-1055 - Build docker image using local parameters
- If user provides sample output run script to test inputs/outputs
- if not, manual inspections is required
- Scripts show pass/fail in tool script
- Admin click accept or reject
- (Rui Liu, Inna Zharnitsky) Admin deploys tool by selecting instances to deploy interface on
Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-916 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-954 Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-733 - e.g. dts-dev or dts
- selects minimum number of instances to provision (e.g. 5 instances)
- presses button to deploy
- Elasticity backend: deploy docker images
, deploy VM imagesJira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-890
, stopJira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-930
.Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-941 - Tool Catalog UI: BD-733 (deploy), BD-954 (stop).
- Task: integration testing after the web UI part is done.
Jira server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-975
- (Sandeep Puthanveetil Satheesan) Admin receives status page showing number of tools deployed and where, load on each tool, etc...
- No support for this at this time.
- How to pull this from MongoDB
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