Page History

• PEcAn
  • Release 1.4.5
  • Write XSEDE paper
• SEAD
  • Fix bug in clowder in SHA512 with mongo
• TERRA
  • Fix login logic in clowder
• LSST
  • Read up on workflows/LSST/resource management
  • Give time estimates

• NIST-CORE

• NIST-CORE

• BD: finish the stopping extractor task. April workshop tasks according to story board.
• Earthcube: version 0.3 tasks.

• BD:
  • Finished the stopping extractor task.

    Jira
    server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-941

    
    Did much testing: stop, restart with VM image, restart with a docker container image.
  • Story board tasks: met with Sandeep to discuss design of monitoring page; met with Inna to discuss TC/EM integration: web UI and integration testing.
• Earthcube:
  • Per Peishi's request, updated BMI on ecgs-dev to the latest dev branch content, installed "rdflib" python module; updated bmi.conf to fix an error.
  • Per Mostafa's request, resolved issues in SKOSMOS configuration, helped him test new vocabularies he created in multiple iterations. Figured out a way to configure nginx, so he could test remotely.
  • Proj meeting on Friday, to prepare for next week's all-hands project meeting, created slides.
• Attended John Towns' DCIO plan meeting on Thursday morning.

• BD Sprint
• NDSC planning
• LSST staffing
• Engaging BD2K

• BD Sprint
• NDSC 16 planning
• LSST staffing
• BD2K engagment

• BD - continue work on BD-886, setup DataWolf VM with endpoint for building workflows from Clowder extractions
• NIST - code review, work on tornado building damage analysis
• Personal day Feb. 15th

• BD - worked on BD-886, added endpoint to datawolf to build workflows from DTS extractors ran on a file, connected local DW server to dts-dev to test building the workflow of extractors
• NIST - code review, worked on tornado building damage analysis and tested with sample fragilities
• CyberSEES - discussed status/hackathon with Indira/Jong for the week of Feb 29 - March 2nd
• Other - answered Ergo questions

• ECGS - CSV annotation webapp in react
• GLM - learning react
• BD - sprint planning
• SEAD - end Beta 2 sprint 1
• Clowder - release 1.0 setup

• ECGS - CSV annotation webapp in react
• GLM - learning react
• BD - sprint planning
• SEAD - end Beta 2 sprint 1
• Clowder - release 1.0 setup

1. SEAD - JIRA tasks, finish for the Sprint CATS-377, CATS-393, CATS-381, CATS-416, CATS-404, CATS-385, CATS-387
2. MDF - NDS/2016-02-15+Kickoff
3. MWRD - prepare storm table for Erdu

1. DONE CATS-377, CATS-393, CATS-381, CATS-385
2. slides and more, see NDS/2016-02-15+Kickoff
3. Done

• BD
  • XSEDE Paper outline discussed with Rob, planned the tasks with due date and sent out the JIRA tasks
  • Filled up the details on the sprint story board - went through each repository to assess what is there and what's need to be done.
  • Started learning docker and started testing existing docker files in our repo.
• SDN
  • Finished updating the flow classification and introduction sections. Also reviewed the whole paper and sent it to the team for comments.
• Reviewed Max Pull Request on pyClowder
• With Marcus tried to fix the slow down of file upload on IARP clowder server instance.

• DEBOD
  • Complete cell segmentation work

    Jira
    server JIRA serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key DEBOD-5

• BD
  • Investigate admin status page for tool deployment

    Jira
    server JIRA serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key BD-943

  • Start with updating VAT extractors to use pyClowder

    Jira
    server JIRA serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key CATS-423

• VAT

  • Jira
    server JIRA serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key CATS-419

• DEBOD
  • Tried Census cell segmentation work with debod data. Results updated in DEBOD JIRA.
• BD
  • Identified some information that needs to displayed on the Tools monitor page
  • Worked on a write up for the storyboard
  • Worked on some mock ups for the Tools monitor page
  • Discussed about the design with Rui

• BD Tool Catalog - continue working on the deploy form api.

• IARP
  • work on extractors
• BD
  • add download files to web app for clowder data analysis

• IARP/BD
  • cpp extractors
    • • installed all libraries on linux and took very good notes
      • got amqpclient to work on clowder:dts-dev, rabbitmq:clowder-dev
        
        • queueing works and get file request body with file metadata
      • messing with choice of request library
  • analysis web app
    • worked on file downloading
      • single file through anchor works
      • download set of images through php call not yet working
  • installed opencv on linux
    • very involved again, hacked it to work and still don't have good notes (will need to install on hpc with no root-yikes)
• IARP
  
  • mongo on iarp server
    • ran image loader and did some profiling
    • delete-all and start reloading images (we'll see)
• GLTG
  • just added some text to confluence for pyGeodashboard

CyberSEES

• • Meeting with Jong and Chris about next steps
  • Stub steps for selecting scenario.

SEAD

• • Updating pull requests based on feedback
  • Refactor delete buttons functionality to avoid page refreshes

CyberSEES

• • Meeting with Jong and Chris about next steps
  • Stub steps for selecting scenario.

SEAD

• • Updating pull requests based on feedback
  • Refactor delete buttons functionality to avoid page refreshes (some work)
  • Fix visualizations to take into account files within folders
  • Include Folders when downloading.

BD

• • Confirm tasks for April 4 sprint

NIST

• • Action items from Thrust 2 workshop

GLTG

• • Confirm demo readiness/follow up

MWRD

• • Reminder about missing data sets

• • Tornado electric power network damage analysis

• • Worked on tornado electric power network damage analysis

• • Jira
    server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key NIST-42

  • Jira
    server JIRA columns key,summary,type,created,updated,due,assignee,reporter,priority,status,resolution serverId b14d4ad9-eb00-3a94-88ac-a843fb6fa1ca key NIST-40

• • Out Monday
  • Investigated Landslide and Surface Fault Rupture, need more information on what to include.
  • Added ChiouYoungs2013 to NGAs

TERRA

• • get Pyclowder pull request merged
  • JSON-LD planning
  • finish geojson previewer port to OpenLayers

• • openlayers mapping port mostly done
  • worked w Danforth on transfer tests
  • bulk sample data upload for TERRA
  • fix merge conflict on pull request for CATS-275

• • SEAD
    • add folder into curation object
  • MSC
    • smaller white space.

• SEAD
  • review code & fix old pull request
• MSC
  • 2-page report for glomerulus detection.