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Overall Process Pipeline

  •  download the raw meteorology data
    •  automate the downloading process
  •  creating master meteorological data file
    •  preprocessing raw meteorology data for eddypro
      •  timestamp checks
      •  adding missing timestamps
      •  value missing checks
      •  unit checks
      •  soil heat flux calculation
      •  absolute humidity calculation
      •  shortwave radiation calculation
      •  test for 1 week data
      •  test for full data
      •  test for new data (3 month timeframe)
      •  precipitation data calculation (pending as data not available/shared)
  •  formatting the raw met data
  •  create the dynamic metadata
  •  automate eddyPro launching in the pipeline
    •  check the output from eddypro
  •  use the eddyPro output in pyFluxPro (L1)


Automation File Structure

  • downloaded raw meteorology data
    • /raw_metdata/
  • created raw meteorology data
  • formatted row meteorology data (input for eddypro)
  • output from eddypro

Creating a Master Meteorological Data File 

  • need to obtain the data file (check permission for accessing the data, 2021-08-10 meeting)  
  • connecting to , file-server.igb.illinois.edu
  • acquiring ofTools excel tool

Processing Raw Flux Data in EddyPro

  • had a demo in 2021-08-10 meeting

Formatting Meteorological Data for Eddypro

  • this could be automated by using python 
  • NCSA will work on coding and will ask verification of the output to Carl's group 

Assembling Dynamic Metadata

Running Eddy Pro

Common Errors and Issues

  • can eddy pro run without gui? (headless)
  • if not, does it have project file or something so it can be modified automatically?

PyFluxPro: QA/QC, Gap Filling, and Partitioning

Installing

Creating the Database

first demo at Sep 15 2021

Formatting the PyFluxPro Control Files

Primary

Secondary

Other

Running a Flux Database through PyFluxPro

L1-L3: Processing Single Years

L4-L6: Processing a Full, or Muti-Year, Dataset (Incomplete)