Scientific
Qina Yan
| Domain | Tool | Type | Description | Repositories | Contact | Deployed? | |||
|---|---|---|---|---|---|---|---|---|---|
| Hydrology | Document Tables Extractor (ncsa.nlp.wordtables) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/WordTablesExtractor | ||||||
| GDAL (ncsa.geo.shpExtractor) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geo/browse | |||||||
| GDAL (ncsa.geo.tiffExtractor) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geo/browse | |||||||
| GDAL (ncsa.image.geotiff) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geotiff/browse | |||||||
| Historical River Extractor (ncsa.cv.river) | Extractor | Extract the river networks from the ancient hand-drawing maps and compare them with current river networks | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/river | |||||
| Normalized Difference Vegetation Index (ncsa.arcgis.landsat7mosaic) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-bd-cz/browse/ndviextractor | |||||||
| River | DynamicsChi Index | Extractor | Identify the river dynamics in a river basin and evaluate human activities' influences through Chi index in the streams. | ||||||
| River Sinuosity | Extractor | Study the maturity and equilibrium conditions of a stream through the sinuosity index. | |||||||
| Soil Moisture Change | Extractor | Determine role of hydraulic redistribution in AZ (riparian site / upland site) by studying soil moisture change throughout different seasons. | Esther Lee (estherl2010@gmail.com) | ||||||
| Species Classifier | Extractor | SAM based Species Classification from Hyperspectral data, Hyperspectral Indices, NDVI | Species Classifier | Extractor | SAM based Species Classification from Hyperspectral data, Hyperspectral Indices, NDVI, SAVI, MSAVI, etc. | Debsunder Dutta (debsunderdutta@gmail.com) leaving in July 2016 | |||
| TerEx (ncsa.arcgis.floodplain) | Extractor | Identify the flat polygons and the heights inside a river valley. | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-bd-cz/browse/terex_floodplain | _floodplain | |||||
| Topographic Depressions | Extractor | Identify topographic depressions (TDs) and their distribution on landscape (Number, location, area, volume of TDs). | |||||||
| Tree Delineation | Converter | Tree-wise voxelization of waveform data for lidar metrics that describes canopy structure (max intensity, height, etc...). Individual tree delineation, tree leaf area density to describe vertical leaf distributio. | https://opensource.ncsa.illinois.edu/bitbucket/projects/BD/repos/ir-lidar/browse | Kunxuan Wang | |||||
| Valley Safety Zones | Extractor | 1. Estimate submerging areas and water depths under extreme floods and map the safety zones in a river valley and 2. Understand river valley equilibrium condition. | Qina Yan | ||||||
| Vegetation Indices | Extractor | Calculating vegetation indices such as NDVI and Surface Temperature from Landsat 7 and 8 satellite data. | Debsunder Dutta (debsunderdutta@gmail.com) leaving in July 2016 | ||||||
| Ecology
| netcdf (ncdump) | Converter | https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-ncdump/browse | ||||||
| PEcAn (PEcAn#Ameriflux) | Converter | https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-pecan/browse | |||||||
| PEcAn (PEcAn#DALEC) | Converter | https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-pecan/browse | |||||||
| PEcAn (PEcAn#ED2) | Converter | https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-pecan/browse | |||||||
| PEcAn (PEcAn#LINKAGES) | Converter | https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-pecan/browse | |||||||
| PEcAn (PEcAn#Sipnet) | Converter | https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-pecan/browse | |||||||
| PlantCV (terra.plantcv) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-plantcv/browse | Yan Liu | ||||||
| Civil & Environmental Engineering | Body of Water Detector (ncsa.image.ponddetect) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/feature_detection | ||||||
| Human Preference Score (ncsa.image.humanpref) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/humanpref | |||||||
Route Greenness (ncsa.xml.greenindexroute) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/greenroute | |||||||
| Stanford CoreNLP - Sentiment (ncsa.nlp.SNLPSentiment) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SNLP/SNLPSentimentExtractor | ||||||
| Social Science & Humanities | Bertillon Card Cell Extractor (ncsa.image.dmp) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/DEBOD/repos/extractors-debod | ||||||
| Census Form Cell Extractor (census-section-segmentor) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/census | |||||||
| Handwritten Decimals Extractor (ncsa.image.sphog.debod) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/DEBOD/repos/extractors-handwrittendecimals | |||||||
| Movie Slice (ncsa.movieslice) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-movieslice/browse | |||||||
| Person Detector (person-detector) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-person-detector | |||||||
| Person Tracker (ncsa.person-tracker) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-person-tracking | |||||||
| Video Analytics Toolbox (ncsa.cinemetrics_batch) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-lsva-integrated/browse | |||||||
| Biology, Genomics, Medicine | FSL (mri2mesh) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-mri/browse/mri2mesh | Marcus Slavenas | |||||
| Glomeruli (ncsa.msc.diagnosis) | Extractor | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/Kidney |
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