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Scientific

Domain ToolTypeDescriptionRepositoriesContactDeployed?

 

 

 

 

 

 

 

 

Hydrology

Historical River Extractor (ncsa.cv.river)Extractor https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/river 
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GDAL (ncsa.geo.shpExtractor) Extractor https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geo/browseJong Lee
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GDAL (ncsa.geo.tiffExtractor)Extractor https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geo/browseJong Lee
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GDAL (ncsa.image.geotiff)  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geotiff/browseRui, Mostafa Elag
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ArcGIS (ncsa.arcgis.landsat7mosaic)  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-bd-cz/browse/ndviextractorSmruti
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ArcGIS (ncsa.arcgis.floodplain)  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-bd-cz/browse/terex_floodplain/config.pySmruti
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Biology

PEcAn (PEcAn#Ameriflux)  https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-pecan/browse
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PEcAn (PEcAn#DALEC)  https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-pecan/browse
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PEcAn (PEcAn#ED2)  https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-pecan/browse
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PEcAn (PEcAn#LINKAGES)  https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-pecan/browse
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PEcAn (PEcAn#Sipnet)  https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-pecan/browse
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PlantCV (terra.plantcv)  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-plantcv/browseYan Liu
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netcdf (ncdump)  https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-ncdump/browse
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Civil & Environmental Engineering

Stanford CoreNLP Sentiment (ncsa.nlp.SNLPSentiment)  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SNLP/SNLPSentimentExtractorLiana, Marcus(?)
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Body of Water Detector (ncsa.image.ponddetect)

  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/feature_detectionMarcus, Ankit
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Human Preference Score (ncsa.image.humanpref)  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/humanprefMarcus, Ankit
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ncsa.xml.greenindexroute, ncsa.csv.greenindexroute

  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/greenrouteMarcus
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 census-section-segmentor Extractor https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/censusLiana, Inna
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ncsa.image.knn_numerals

   Marcus
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 ncsa.nlp.wordtables  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/WordTablesExtractorLiana
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 LSVA  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-lsva/browseLiana, Constantinos
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 LSVA integrated  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-lsva-integrated/browse
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 ncsa.movieslice  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-movieslice/browseSandeep
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 mri2mesh  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-mri/browse/mri2meshMarcus
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 msc-ChemCBCExtractor  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/ChemCBCExtractorYan
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 msc-IsletExtractor  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/IsletExtractorYan
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 msc-MonitorExtractor  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/MonitorExtractorYan
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 ncsa.msc.dailymonitor  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/OldMonitorExtractorAshwini
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 msc-PhenotypeExtractor  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/PhenotypeExtractorYan
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 person-detector  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-person-detector/browse/pythonSandeep
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 ncsa.person-tracker  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-person-tracking/browse/pythonSandeep
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 lsva-cedd  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cedd/browseConstantinos
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 ncsa.cinemetrics  https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cinemetrics/browseConstantinos
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General

Tool

TypeDescriptionRepositoriesContact
Calibre (ebook-converter)ConverterConvert e-books to a number of document formats.https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-ebook-convert/browse 

CMU Sphinx (ncsa.audio.speech2text)

ExtractorAudio recognition to extract text for speech within audio.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-core/browse/audio/speech2text
Daffodil (daffodil)ConverterConvert formats with a provided DFDL schema to XML.https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-daffodil/browseKenton McHenry
DBPedia (ncsa.dbpedia)ExtractorFind and define named entities within the given text.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-dbpedia/browse
FFMPEG (ffmpeg)ConverterConvert between a large number of video formats.https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-ffmpeg/browse
FLAC (flac)ConverterConvert to and from the FLAC format from other audio formats.https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-flac/browse
Ghostscript (ghostscript)ConverterConvert between document formats.https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-ghostscript/browse
htmldoc (htmldoc)ConverterConvert HTML to a number of document formats.https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-htmldoc/browseKenton McHenry
ImageMagick (ImageMagick)ConverterConvert between a large number of image formats.https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-imagemagick/browseKenton McHenry
ImageMagick (ncsa.image.metadata)ExtractorPull available EXIF image metadata from a given image.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-core/browse/image/metadata
Kabeja (kabeja)ConverterConvert between a handful of 3D and image formats.https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-kabeja/browse 

OpenCV - Faces (ncsa.cv.faces)

ExtractorFind faces in an image and return their locations.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/extractors-opencv/extractors-opencv-facesKenton McHenry

OpenCV - Eyes (ncsa.cv.eyes)

ExtractorFind eyes in an image and return their locations.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/extractors-opencv/extractors-opencv-eyesKenton McHenry

OpenCV - Closeups (ncsa.cv.closeups)

ExtractorDetermine whether an image is a closeup of a person or not.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/extractors-opencv/extractors-opencv-closeupsKenton McHenry

OpenCV - Profiles (ncsa.cv.profiles)

ExtractorFind human face profiles in an image and return their locations.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/extractors-opencv/extractors-opencv-profilesKenton McHenry
Langid (ncsa.nlp.simplelanguage)ExtractorIdentify the language of the given text.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SimpleLanguage 
LibreOffice (unoconv)ConverterConvert to and from a variety of document formats.https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-unoconv/browse 
NLTK - Summary (ncsa.nlp.simplesummary)ExtractorSummarize a body of text.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SimpleSummary 
Siegfried (sigfried)ExtractorExtract information about a given file relevant to identifying its type and validating its format.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-siegfried/browse
Stanford CoreNLP (ncsa.nlp.SNLP)ExtractorNatural Language Process extractions such as parts of speech, named entities, langauge, etc.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SNLP/SNLPExtractor 
Tesseract (ncsa.image.ocr)ExtractorObject Character Recognition (OCR) to extract text from images containing text.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/extractors-tesseractKenton McHenry
Tika (ncsa.nlp.tika)ExtractorDocument extractions such as language identification, ...https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/tika
txt2html (txt2html)ConverterConvert text documents to HTML.https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-txt2html/browseKenton McHenry
Versus - Color Distribution (ncsa.versus.image)ExtractorGenerate a distribution of color values within an image to be used for comparing how similar two images are.https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-versus/browse

VLFeat (ncsa.image.caltech101)

ExtractorClassify images as to whether they contain objects from the Caltech101 dataset (e.g. people, airplanes, motorcycles, cougars, ...).https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/extractors-vlfeatKenton McHenry
Zip (zip)ConverterUnzip zip archives.https://opensource.ncsa.illinois.edu/bitbucket/projects/POL/repos/converters-zip/browseKenton McHenry

https://opensource.ncsa.illinois.edu/confluence/display/BD/Extractors

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