Tool | Description | Software | Repositories | Contact |
|---|
| Tesseract (ncsa.image.ocr) | | Tesseract | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/ocr | |
OpenCV Faces (ncsa.cv.faces) | | OpenCV | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/opencv | |
OpenCV Eyes (ncsa.cv.eyes) | | OpenCV | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/opencv | Liana |
OpenCV Closeups (ncsa.cv.closeups) | | OpenCV | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/opencv | Liana |
OpenCV Profiles (ncsa.cv.profiles) | | OpenCV | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/opencv | Liana |
ncsa.cellprofiler.fluorescentcomet | | pymedici  | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
ncsa.cellprofiler.fly | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
ncsa.cellprofiler.human | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
ncsa.cellprofiler.silvercomet | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
ncsa.cellprofiler.speckle | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
ncsa.cellprofiler.trackobject | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
ncsa.cellprofiler.tumor | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
ncsa.cellprofiler.yeast | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
ncsa.image.sphog | | Matlab, mnist-sphog | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/handwritten/HandwrittenNumbers | |
| | | | |
| ncsa.bisque.histogram (notes: disabled) | | | | |
| ncsa.bisque.metadata (notes: disabled) | | | | |
| census-section-segmentor | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/census | Liana, Inna |
| ncsa.geo.shpExtractor | | gdal | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geo/browse | Jong Lee |
| ncsa.geo.tiffExtractor | | gdal | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geo/browse | Jong Lee |
| ncsa.image.geotiff | | GDAL, Cython, numpy,
pygeoprocessing | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geotiff/browse | Rui, Mostafa Elag |
ncsa.image.ponddetect | | Matlab | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/feature_detection | Marcus, Ankit |
| ncsa.image.humanpref | | Matlab | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/humanpref | Marcus, Ankit |
ncsa.xml.greenindexroute, ncsa.csv.greenindexroute | | OpenCV | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/greenroute | Marcus |
ncsa.image.knn_numerals | | OpenCV | | Marcus |
ncsa.audio.speech2text | | CMU Sphinx, ffmpeg, sox | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-core/browse/audio/speech2text | Marcus |
| ncsa.audio.preview | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-core/browse/audio/preview | |
| ncsa.nlp.simplelanguage | | numpy | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SimpleLanguage | Liana |
| ncsa.nlp.simplesummary | | Natural Language Toolkit (NLTK) for Python, NLTK Data or at least: nltk.corpus,nltk.stem.porter and nltk.tokenize.punkt. | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SimpleSummary | Liana |
| ncsa.nlp.SNLPSentiment | | Stanford CoreNLP tool, java, maven | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SNLP/SNLPSentimentExtractor | Liana, Marcus(?) |
| ncsa.nlp.wordtables | | requests, pika, win32com | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/WordTablesExtractor | Liana |
| siegfried | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-siegfried/browse | Gregory Jansen |
| ncsa.versus.image | | Versus | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-versus/browse | Kenton, Smruti |
| ncsa.image.preview (note: check if really deployed. there is an extractor in Hosted VMs list with a similar name.) | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-core/browse/image/preview | Rob, Sandeep |
| ncsa.pdf.preview (note: check if really deployed. there is an extractor in Hosted VMs list with a similar name.) | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-core/browse/pdf/preview | Rob |
| ncsa.video.preview (note: check if really deployed. there is an extractor in Hosted VMs list with a similar name.) | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-core/browse/video/preview | Rob |
| NOT DEPLOYED | | | | |
| ncsa.image.digitpy | | opencv | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/handwritten/SimpleDigitPython | |
| ncsa.cv.pdfimages | | pdfimages, from poppler-utils | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/poppler | |
| ncsa.cv.caltech101 | | Matlab and VLFeat | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/vlfeat | |
| dbpedia | | Natural Language Toolkit (NLTK) and rdflib. | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-dbpedia/browse | |
| digest | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-digest/browse | |
| ncsa.hpc | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-hpc/browse | |
| LSVA | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-lsva/browse | Liana, Constantinos |
| LSVA integrated | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-lsva-integrated/browse | |
| ncsa.movieslice | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-movieslice/browse | Sandeep |
| mri2mesh | | pymedici, subprocess, logging, os, numpy, shutil, zipfile | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-mri/browse/mri2mesh | Marcus |
| msc-ChemCBCExtractor | | requests, pika, openpyxl, xlrd, pymongo | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/ChemCBCExtractor | Yan |
| msc-IsletExtractor | | requests, pika, openpyxl, xlrd, pymongo | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/IsletExtractor | Yan |
| msc-MonitorExtractor | | requests, pika, openpyxl, xlrd, pymongo | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/MonitorExtractor | Yan |
| ncsa.msc.dailymonitor | | requests, pika, openpyxl, xlrd, pymongo | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/OldMonitorExtractor | Ashwini |
| msc-PhenotypeExtractor | | requests, pika, openpyxl, xlrd, pymongo | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/PhenotypeExtractor | Yan |
| ncsa.nlp.SNLP | | Stanford CoreNLP tool, java, maven | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SNLP/SNLPExtractor | Liana |
| ncsa.nlp.tika | | Tika project page, pymedici | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/tika | Liana |
| person-detector | | MATLAB, FFMPEG, requests and pika | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-person-detector/browse/python | Sandeep |
| ncsa.person-tracker | | python, MATLAB, FFMPEG requests and pika | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-person-tracking/browse/python | Sandeep |
| terra.plantcv | | pika
requests
wheel | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-plantcv/browse | Yan |
| medici_PTM_thumbnails | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-ptm/browse/PTMThumbnailExtractor | Constantinos |
| medici_PTM_metadata | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-ptm/browse/PTMMetadataExtractor | Constantinos |
Name not clear PtmMetadata(?) | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-ptm/browse/PTMMetadata | Constantinos |
| medici_ptm_maps | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-ptm/browse/PTMMapsExtractor | Constantinos |
| medici_ptm_3d | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-ptm/browse/PTM3DExtractor | Constantinos |
| medici_images_ptm | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-ptm/browse/ImagesPTMExtractor | Constantinos |
extractors-rabbitmq (look like examples) | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-rabbitmq/browse | |
| Name not clear extractors-seabird/ | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-seabird/browse | Luigi |
| medici_3d_x3d (one of extractors-3d) | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-3d/browse/ObjJSONExtractor | Constantinos |
| medici_3d_obj_merger (one of extractors-3d) | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-3d/browse/OBJMergerExtractor | Constantinos |
| medici_oni (one of extractors-3d) | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-3d/browse/OniExtractor | Constantinos |
| medici_ply_obj (one of extractors-3d) | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-3d/browse/PlyObjExtractor | Constantinos |
| medici_3d_metadata (one of extractors-3d) | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-3d/browse/ThreeDMetadataExtractor | Constantinos |
| medici_x3d_html (one of extractors-3d) | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-3d/browse/X3DhtmlExtractor | Constantinos |
| ncsa.arcgis.landsat7mosaic | | ArcGIS | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-bd-cz/browse/ndviextractor | Smruti |
| ncsa.arcgis.floodplain | | ArcGIS | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-bd-cz/browse/terex_floodplain/config.py | Smruti |
| medici_book | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-books/browse/BookPreviewExtractor | Theerasit Issaranon |
| medici_image_pyramid | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-books/browse/ImagePreviewPyramidExtractor-shebook | Theerasit Issaranon |
| shebook | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-books/browse/SheBookPreviewExtractor/src/BookPreviewExtractor https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-books/browse/SheBookPreviewExtractor/src/bookpreviewextractor | Theerasit Issaranon |
| lsva-cedd | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cedd/browse | Constantinos |
| ncsa.cinemetrics | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cinemetrics/browse | Constantinos |
| ncsa.image.metadata | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-core/browse/image/metadata | Max. Rob |