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Job: default was successful

Stages & jobs

  1. Default Stage

Build log

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15-Apr-2016 12:24:19 2016-04-15 12:24:19,971 - [DEBUG  ] - application - techmd={}
15-Apr-2016 12:24:19 2016-04-15 12:24:19,971 - [DEBUG  ] - application - xmlmd={ }
15-Apr-2016 12:24:19 2016-04-15 12:24:19,973 - [INFO   ] - application - Adding file to dataset completed
15-Apr-2016 12:24:19 2016-04-15 12:24:19,975 - [DEBUG  ] - application - tagStr=[]
15-Apr-2016 12:24:19 2016-04-15 12:24:19,976 - [DEBUG  ] - application - commentStr=[]
15-Apr-2016 12:24:19 2016-04-15 12:24:19,977 - [DEBUG  ] - application - usrmd={}
15-Apr-2016 12:24:19 2016-04-15 12:24:19,978 - [DEBUG  ] - application - techmd={}
15-Apr-2016 12:24:19 2016-04-15 12:24:19,978 - [DEBUG  ] - application - xmlmd={ }
15-Apr-2016 12:24:19 [info] - must respond to the createDataset() function routed by POST /api/datasets for Dataset 1 Creation
15-Apr-2016 12:24:19 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1
15-Apr-2016 12:24:19 [info]   + Status=200
15-Apr-2016 12:24:19 [info]   + contentType=Some(application/json)
15-Apr-2016 12:24:19 [info]   + contentAsString{"id":"571123c360b228893c3dd119"}
15-Apr-2016 12:24:19 2016-04-15 12:24:19,984 - [DEBUG  ] - application - File1 is File:True
15-Apr-2016 12:24:20 2016-04-15 12:24:20,179 - [DEBUG  ] - application - Uploading file dataset-image-1.zip
15-Apr-2016 12:24:20 2016-04-15 12:24:20,282 - [DEBUG  ] - application - --- API Creating new dataset ----
15-Apr-2016 12:24:20 2016-04-15 12:24:20,292 - [DEBUG  ] - application - tagStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,293 - [DEBUG  ] - application - commentStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,294 - [DEBUG  ] - application - usrmd={}
15-Apr-2016 12:24:20 2016-04-15 12:24:20,294 - [DEBUG  ] - application - techmd={}
15-Apr-2016 12:24:20 2016-04-15 12:24:20,295 - [DEBUG  ] - application - xmlmd={ }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,296 - [INFO   ] - application - Adding file to dataset completed
15-Apr-2016 12:24:20 2016-04-15 12:24:20,298 - [DEBUG  ] - application - tagStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,299 - [DEBUG  ] - application - commentStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,299 - [DEBUG  ] - application - usrmd={}
15-Apr-2016 12:24:20 2016-04-15 12:24:20,300 - [DEBUG  ] - application - techmd={}
15-Apr-2016 12:24:20 2016-04-15 12:24:20,300 - [DEBUG  ] - application - xmlmd={ }
15-Apr-2016 12:24:20 [info] - must respond to the createDataset() function routed by POST /api/datasets for Dataset 2 Creation
15-Apr-2016 12:24:20 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1
15-Apr-2016 12:24:20 [info]   + Status=200
15-Apr-2016 12:24:20 [info]   + contentType=Some(application/json)
15-Apr-2016 12:24:20 [info]   + contentAsString{"id":"571123c460b228893c3dd130"}
15-Apr-2016 12:24:20 2016-04-15 12:24:20,319 - [DEBUG  ] - application - Adding dataset 571123c360b228893c3dd119 to collection 571123c360b228893c3dd103
15-Apr-2016 12:24:20 2016-04-15 12:24:20,324 - [DEBUG  ] - application - tagStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,324 - [DEBUG  ] - application - commentStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,325 - [DEBUG  ] - application - retmd: { }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,325 - [DEBUG  ] - application - usrmd={ }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,326 - [DEBUG  ] - application - retmd: { }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,326 - [DEBUG  ] - application - techmd={ }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,326 - [DEBUG  ] - application - retmd: [ ]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,326 - [DEBUG  ] - application - xmlmd=[ ]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,333 - [DEBUG  ] - application - Adding dataset to collection completed
15-Apr-2016 12:24:20 [info] - must respond to the attachDataset(coll_id:UUID, ds_id:UUID) function routed by POST /api/collections/:coll_id/datasets/:ds_id for dataset 1
15-Apr-2016 12:24:20 [info]   + Status=200
15-Apr-2016 12:24:20 [info]   + contentType=Some(application/json)
15-Apr-2016 12:24:20 [info]   + contentAsString{"datasetsInCollection":1}
15-Apr-2016 12:24:20 [info] - must respond to the listInCollection(coll_id: UUID) function routed by GET /api/collections/:coll_id/getDatasets
15-Apr-2016 12:24:20 [info]   + Status_Get=200
15-Apr-2016 12:24:20 [info]   + contentType_Get=Some(application/json)
15-Apr-2016 12:24:20 [info]   + Pretty JSON format
15-Apr-2016 12:24:20 [info]   + [ {
15-Apr-2016 12:24:20 [info]   "id" : "571123c360b228893c3dd119",
15-Apr-2016 12:24:20 [info]   "name" : "Dataset 1 API Test Creation",
15-Apr-2016 12:24:20 [info]   "description" : "Part 1 of Dataset API Test Suite",
15-Apr-2016 12:24:20 [info]   "created" : "Fri Apr 15 12:24:19 CDT 2016",
15-Apr-2016 12:24:20 [info]   "thumbnail" : "None",
15-Apr-2016 12:24:20 [info]   "authorId" : "000000000000000000000000"
15-Apr-2016 12:24:20 [info] } ]
15-Apr-2016 12:24:20 [info] - must respond to the listOutsideCollection(coll_id: UUID) function routed by GET /api/datasets/listOutsideCollection/:coll_id
15-Apr-2016 12:24:20 [info]   + Status_Get=200
15-Apr-2016 12:24:20 [info]   + contentType_Get=Some(application/json)
15-Apr-2016 12:24:20 [info]   + Pretty JSON format
15-Apr-2016 12:24:20 [info]   + [ {
15-Apr-2016 12:24:20 [info]   "id" : "571123c460b228893c3dd130",
15-Apr-2016 12:24:20 [info]   "name" : "Dataset 2 API Test Creation",
15-Apr-2016 12:24:20 [info]   "description" : "Part 2 of Dataset API Test Suite",
15-Apr-2016 12:24:20 [info]   "created" : "Fri Apr 15 12:24:20 CDT 2016",
15-Apr-2016 12:24:20 [info]   "thumbnail" : "None",
15-Apr-2016 12:24:20 [info]   "authorId" : "000000000000000000000000"
15-Apr-2016 12:24:20 [info] }, {
15-Apr-2016 12:24:20 [info]   "id" : "571123c360b228893c3dd119",
15-Apr-2016 12:24:20 [info]   "name" : "Dataset 1 API Test Creation",
15-Apr-2016 12:24:20 [info]   "description" : "Part 1 of Dataset API Test Suite",
15-Apr-2016 12:24:20 [info]   "created" : "Fri Apr 15 12:24:19 CDT 2016",
15-Apr-2016 12:24:20 [info]   "thumbnail" : "None",
15-Apr-2016 12:24:20 [info]   "authorId" : "000000000000000000000000"
15-Apr-2016 12:24:20 [info] } ]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,402 - [DEBUG  ] - application - Adding dataset 571123c460b228893c3dd130 to collection 571123c360b228893c3dd103
15-Apr-2016 12:24:20 2016-04-15 12:24:20,405 - [DEBUG  ] - application - tagStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,405 - [DEBUG  ] - application - commentStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,406 - [DEBUG  ] - application - retmd: { }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,406 - [DEBUG  ] - application - usrmd={ }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,406 - [DEBUG  ] - application - retmd: { }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,407 - [DEBUG  ] - application - techmd={ }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,407 - [DEBUG  ] - application - retmd: [ ]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,407 - [DEBUG  ] - application - xmlmd=[ ]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,412 - [DEBUG  ] - application - Adding dataset to collection completed
15-Apr-2016 12:24:20 [info] - must respond to the attachDataset(coll_id:UUID, ds_id:UUID) function routed by POST /api/collections/:coll_id/datasets/:ds_id for dataset 2
15-Apr-2016 12:24:20 [info]   + Status=200
15-Apr-2016 12:24:20 [info]   + contentType=Some(application/json)
15-Apr-2016 12:24:20 [info]   + contentAsString{"datasetsInCollection":2}
15-Apr-2016 12:24:20 2016-04-15 12:24:20,426 - [DEBUG  ] - application - Removing dataset 571123c460b228893c3dd130 from collection 571123c360b228893c3dd103
15-Apr-2016 12:24:20 2016-04-15 12:24:20,431 - [DEBUG  ] - application - tagStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,432 - [DEBUG  ] - application - commentStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,433 - [DEBUG  ] - application - retmd: { }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,433 - [DEBUG  ] - application - usrmd={ }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,434 - [DEBUG  ] - application - retmd: { }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,434 - [DEBUG  ] - application - techmd={ }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,435 - [DEBUG  ] - application - retmd: [ ]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,435 - [DEBUG  ] - application - xmlmd=[ ]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,442 - [INFO   ] - application - Removing dataset from collection completed
15-Apr-2016 12:24:20 [info] - must respond to the removeDataset(coll_id:UUID, ds_id:UUID, ignoreNotFound) function routed by DELETE /api/collections/:coll_id/datasets/:ds_id for dataset 2
15-Apr-2016 12:24:20 [info]   + Status=200
15-Apr-2016 12:24:20 [info]   + contentType=Some(application/json)
15-Apr-2016 12:24:20 [info]   + contentAsString{"status":"success"}
15-Apr-2016 12:24:20 2016-04-15 12:24:20,453 - [DEBUG  ] - application - Removing dataset 571123c360b228893c3dd119 from collection 571123c360b228893c3dd103
15-Apr-2016 12:24:20 2016-04-15 12:24:20,458 - [DEBUG  ] - application - tagStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,459 - [DEBUG  ] - application - commentStr=[]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,460 - [DEBUG  ] - application - retmd: { }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,460 - [DEBUG  ] - application - usrmd={ }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,461 - [DEBUG  ] - application - retmd: { }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,461 - [DEBUG  ] - application - techmd={ }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,462 - [DEBUG  ] - application - retmd: [ ]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,462 - [DEBUG  ] - application - xmlmd=[ ]
15-Apr-2016 12:24:20 2016-04-15 12:24:20,466 - [INFO   ] - application - Removing dataset from collection completed
15-Apr-2016 12:24:20 [info] - must respond to the removeDataset(coll_id:UUID, ds_id:UUID, ignoreNoteFound) function routed by POST /api/collections/:coll_id/datasets/:ds_id/:ignoreNotFound for dataset 2
15-Apr-2016 12:24:20 [info]   + Status=200
15-Apr-2016 12:24:20 [info]   + contentType=Some(application/json)
15-Apr-2016 12:24:20 [info]   + contentAsString{"status":"success"}
15-Apr-2016 12:24:20 2016-04-15 12:24:20,476 - [DEBUG  ] - application - userdfSPARQLStore not enabled
15-Apr-2016 12:24:20 2016-04-15 12:24:20,483 - [DEBUG  ] - application - Removing XML metadata belonging to file 571123c360b228893c3dd115 from dataset 571123c360b228893c3dd119.
15-Apr-2016 12:24:20 2016-04-15 12:24:20,489 - [ERROR  ] - application - File not found: 571123c360b228893c3dd115
15-Apr-2016 12:24:20 [info] - must respond to the deleteDataset(id:UUID) function routed by DELETE /api/datasets/:id for Dataset 1
15-Apr-2016 12:24:20 [info]   + Status_Get=200
15-Apr-2016 12:24:20 [info]   + contentType_Get=Some(application/json)
15-Apr-2016 12:24:20 [info]   + Pretty JSON format
15-Apr-2016 12:24:20 [info]   + {
15-Apr-2016 12:24:20 [info]   "status" : "success"
15-Apr-2016 12:24:20 [info] }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,497 - [DEBUG  ] - application - userdfSPARQLStore not enabled
15-Apr-2016 12:24:20 2016-04-15 12:24:20,514 - [DEBUG  ] - application - Removing XML metadata belonging to file 571123c460b228893c3dd12c from dataset 571123c460b228893c3dd130.
15-Apr-2016 12:24:20 2016-04-15 12:24:20,535 - [ERROR  ] - application - File not found: 571123c460b228893c3dd12c
15-Apr-2016 12:24:20 [info] - must respond to the deleteDataset(id:UUID) function routed by DELETE /api/datasets/:id for Dataset 2
15-Apr-2016 12:24:20 [info]   + Status_Get=200
15-Apr-2016 12:24:20 [info]   + contentType_Get=Some(application/json)
15-Apr-2016 12:24:20 [info]   + Pretty JSON format
15-Apr-2016 12:24:20 [info]   + {
15-Apr-2016 12:24:20 [info]   "status" : "success"
15-Apr-2016 12:24:20 [info] }
15-Apr-2016 12:24:20 [info] - must respond to the listCollections() function routed by GET /api/collections
15-Apr-2016 12:24:20 [info]   + Status=200
15-Apr-2016 12:24:20 [info]   + contentType=Some(application/json)
15-Apr-2016 12:24:20 [info]   + content[]
15-Apr-2016 12:24:20 [info] - must respond to the listCollections() function routed by GET /api/collections/list
15-Apr-2016 12:24:20 [info]   + Status=200
15-Apr-2016 12:24:20 [info]   + contentType=Some(application/json)
15-Apr-2016 12:24:20 [info]   + content[]
15-Apr-2016 12:24:20 [info] - must respond to the removeCollection(coll_id:UUID) function routed by POST /api/collections/:coll_id/remove 
15-Apr-2016 12:24:20 [info]   + Status_Get=200
15-Apr-2016 12:24:20 [info]   + contentType_Get=Some(application/json)
15-Apr-2016 12:24:20 [info]   + Pretty JSON format
15-Apr-2016 12:24:20 [info]   + {
15-Apr-2016 12:24:20 [info]   "status" : "success"
15-Apr-2016 12:24:20 [info] }
15-Apr-2016 12:24:20 [info] - must respond to the removeCollection(coll_id:UUID) function routed by DELETE /api/collections/:id 
15-Apr-2016 12:24:20 [info]   + Status_Get=200
15-Apr-2016 12:24:20 [info]   + contentType_Get=Some(application/json)
15-Apr-2016 12:24:20 [info]   + Pretty JSON format
15-Apr-2016 12:24:20 [info]   + {
15-Apr-2016 12:24:20 [info]   "status" : "success"
15-Apr-2016 12:24:20 [info] }
15-Apr-2016 12:24:20 2016-04-15 12:24:20,607 - [DEBUG  ] - application - File1 is File:True
15-Apr-2016 12:24:20 [info] PreviewsAPIAppSpec:
15-Apr-2016 12:24:20 [info] The Previews API Spec
15-Apr-2016 12:24:20 [info] - must provide a FakeApplication
15-Apr-2016 12:24:20 [info] - must make the FakeApplication available implicitly
15-Apr-2016 12:24:20 [info] - must start the FakeApplication
15-Apr-2016 12:24:20 [info] The Previews API Spec
15-Apr-2016 12:24:20 2016-04-15 12:24:20,677 - [DEBUG  ] - application - Uploading file morrowplots.jpg
15-Apr-2016 12:24:20 [info] - must respond to the Upload File
15-Apr-2016 12:24:20 2016-04-15 12:24:20,717 - [DEBUG  ] - application - File1 is File:True
15-Apr-2016 12:24:20 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1
15-Apr-2016 12:24:20 [info]   + Status=200
15-Apr-2016 12:24:20 [info]   + contentType=Some(application/json)
15-Apr-2016 12:24:20 [info]   + contentAsString{"id":"571123c460b228893c3dd142"}
15-Apr-2016 12:24:20 2016-04-15 12:24:20,768 - [DEBUG  ] - application - ########Uploading Preview----morrowplots-preview.jpg
15-Apr-2016 12:24:20 2016-04-15 12:24:20,804 - [DEBUG  ] - application - ctp: Some(application/octet-stream)
15-Apr-2016 12:24:20 [info] - must respond to the upload() and download() function routed by POST/GET /api/previews
15-Apr-2016 12:24:20 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1
15-Apr-2016 12:24:20 [info]   + Status=200
15-Apr-2016 12:24:20 [info]   + contentType=Some(application/json)
15-Apr-2016 12:24:20 [info]   + contentAsString{"id":"571123c460b228893c3dd147"}
15-Apr-2016 12:24:20 [info]   + Pretty JSON format
15-Apr-2016 12:24:20 [info]   + {
15-Apr-2016 12:24:20 [info]   "id" : "571123c460b228893c3dd147"
15-Apr-2016 12:24:20 [info] }
15-Apr-2016 12:24:20 [info]   + id value 571123c460b228893c3dd147
15-Apr-2016 12:24:20 [info]   + Status=200
15-Apr-2016 12:24:20 [info]   + contentType=Some(image/jpeg)
15-Apr-2016 12:24:20 2016-04-15 12:24:20,872 - [DEBUG  ] - application - File2 is File:True
15-Apr-2016 12:24:20 2016-04-15 12:24:20,883 - [DEBUG  ] - application - {"Image":"fid","extractor_id":"test-extractor"}
15-Apr-2016 12:24:20 2016-04-15 12:24:20,883 - [DEBUG  ] - application - ListBuffer((Image,"fid"), (extractor_id,"test-extractor"))
15-Apr-2016 12:24:20 2016-04-15 12:24:20,888 - [DEBUG  ] - application - Updating previews.files 571123c460b228893c3dd147 with Map(Image -> fid, extractor_id -> test-extractor)
15-Apr-2016 12:24:20 2016-04-15 12:24:20,900 - [DEBUG  ] - application - api.Files.attachPreview(): No "extractor_id" specified in request, set it to None.  request.body: {}
15-Apr-2016 12:24:20 2016-04-15 12:24:20,903 - [DEBUG  ] - application - attachToFile: extractorId is 'Some(Other)'.
15-Apr-2016 12:24:20 2016-04-15 12:24:20,906 - [DEBUG  ] - application - Updating previews.files 571123c460b228893c3dd147 with Map()
15-Apr-2016 12:24:20 [info]   + contentAsString2000
15-Apr-2016 12:24:20 [info] ������������JFIFHH���������ExifMM*n
15-Apr-2016 12:24:20 [info] v���������%LLgoogleNexus OneHH        ���0220������������0100������������
15-Apr-2016 12:24:20 [info]  ���*2010:03:05 08:51:142010:03:05 08:51:14R980100 N���W���&(ydX
15-Apr-2016 12:24:20  ���d���3WGS-84ASCIIHYBRID-FIX2010:03:05���H������������C                
15-Apr-2016 12:24:20 [info] 
15-Apr-2016 12:24:20  $.' ",#(7),01444'9=82<.342������C                         
15-Apr-2016 12:24:20
15-Apr-2016 12:24:20 2!!22222222222222222222222222222222222222222222222222������uY!������        
15-Apr-2016 12:24:20 [info] ���������}!1AQa"q2���������#B������R������$3br���        
15-Apr-2016 12:24:20 [info] %&'()*456789:CDEFGHIJSTUVWXYZcdefghijstuvwxyz���������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������        
15-Apr-2016 12:24:20 [info] ���������w!1AQaq"2���B������������        #3R���br���
15-Apr-2016 12:24:20 [info] $4���%���&'()*56789:CDEFGHIJSTUVWXYZcdefghijstuvwxyz������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������ ?������������D^������g���8E���N���P!���������}������jx�����������S���>��p���zS>��������lF"������������*������>���������0���������<C@
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15-Apr-2016 12:24:20 [info] ���AU������d������s�����E%fu*������'������������'������7������������������g���������������=Fs���eg4���H������,�������l�����9�����E$�����������������������������������K7������������������,���Q������������+�����������������F���'pRc]���~l���        ������������oq���6H�������Ll���~�����<���������n���������T�����������������2������Y���#���[xZV������xFfi���������Gf���������':���x���m6���.c������.C0���m���>������������n-j4���#���Z������j���f���>i���Tq������FG9'9������}���������T������_}���
15-Apr-2016 12:24:20 ���eH���[���q������H���������#���c���������i������Xb���1��������+���P���G c���������%������7������������ !9 ygoL7|������sP���������q
15-Apr-2016 12:24:20 [info] Cms������k�����,*���������c���:ct���_��������������V���d������d5���u;������I���J��������������Z���������Uj���[O ������������\���XHN������2������=���wV���������������������������+?i���t&49���������������������������<_~!{���������e������ ���_\7.]������B���nVb���c���������������E��� ���e���������������H-���nUCgqt���y������A���`���������#���(������h������Uy������y���������Gs�����.IX������������J��������������������wo���<o���"���������$|s���m������$r���{������������"���07���e$���~���}������"tMV���~3��2���������
15-Apr-2016 12:24:20 [info] u�����������1$���3��������[kmp������]������O9���p=������V������������&�����������������~������qU���j
15-Apr-2016 12:24:20 [���������j���N������_���y,_���L��� ���������|M���-Q���b];��@�����T`<���G������RT���g���������N/���6���V���������k���u`���E���������������&�����������������Qu8V������ rz��������^������x���%���o-������0������q���������������������_{���3O���O������#������������f|+���NX���������������B5���F���%������������F���K���i&X������l���z���I������\|���4x���W������t���-�����������y1��� ln������+���������XIw������o���7`���������T~'���Y������n������\���=���A9��������d���V���@���I���&r�����������������Ii���������h"r������ ���pFX���������������J~������������������I$���������q���x������Q���u ���:.8���0q���1]���x���5E���q������������������<���M��������weX���<zg9�����������+���1uw��������������������������fS������������Z���������+\���2001���������������O������^���������w_���r���&��� [��        ���0_��������������        ������������������������������1K�����������'���������<N���\������������]��������:~���k`4��������(���z������+���H���Cp���4���������
15-Apr-2016 12:24:20 [info] ���$Fn���h��}������c������������������S{\���������/���~$xz/���cY����������������)�����z��������������_p:zQEg.������cJ;���[) 1T1������s���0j#[���v���m���a1R������t���<s���:c���z(�����������������^{������������>G�����������Ok}�����������������'���������(������K)��������������e������r������#���>���[���b������������������������W,���OC9h������
15-Apr-2016 12:24:20 [info] 0
15-Apr-2016 12:24:20 [info]
15-Apr-2016 12:24:20 [info] 
15-Apr-2016 12:24:20 [info] - must respond to the uploadMetadata(id: UUID) and getMetadata(id: UUID) function routed by POST/GET /api/previews/:id/metadata
15-Apr-2016 12:24:20 [info]   + File Pathing /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/test/data/previews/data-test-general.json
15-Apr-2016 12:24:20 [info]   + Pretty JSON format
15-Apr-2016 12:24:20 [info]   + {
15-Apr-2016 12:24:20 [info]   "Image" : "fid",
15-Apr-2016 12:24:20 [info]   "extractor_id" : "test-extractor"
15-Apr-2016 12:24:20 [info] }
15-Apr-2016 12:24:20 [info]   + Status_Post=200
15-Apr-2016 12:24:20 [info]   + contentType_Post=Some(application/json)
15-Apr-2016 12:24:20 [info] - must respond to the attachPreview(file_id:UUID, preview:UUID) function routed by POST /api/files/:file_id/previews/:p_id 
15-Apr-2016 12:24:20 [info]   + Status_Post=200
15-Apr-2016 12:24:20 [info]   + contentType_Post=Some(application/json)
15-Apr-2016 12:24:20 [info]   + Pretty JSON format
15-Apr-2016 12:24:20 [info]   + {
15-Apr-2016 12:24:20 [info]   "status" : "success"
15-Apr-2016 12:24:20 [info] }
15-Apr-2016 12:24:20 [info] - must respond to the filePreviewsList(id: UUID) function routed by GET /api/files/:file_id/listpreviews
15-Apr-2016 12:24:20 [info]   + Status_get=200
15-Apr-2016 12:24:20 [info]   + contentType_get=Some(application/json)
15-Apr-2016 12:24:20 [info]   + Pretty JSON format
15-Apr-2016 12:24:20 [info]   + [ {
15-Apr-2016 12:24:20 [info]   "id" : "571123c460b228893c3dd147",
15-Apr-2016 12:24:20 [info]   "filename" : "morrowplots-preview.jpg",
15-Apr-2016 12:24:20 [info]   "contentType" : "image/jpeg"
15-Apr-2016 12:24:20 [info] } ]
15-Apr-2016 12:24:21 [info] - must respond to the getPreviews(id: UUID) function routed by GET /api/files/:file_id/getPreviews
15-Apr-2016 12:24:21 [info]   + Status_Get=200
15-Apr-2016 12:24:21 [info]   + contentType_Get=Some(application/json)
15-Apr-2016 12:24:21 [info]   + Pretty JSON format
15-Apr-2016 12:24:21 [info]   + [ {
15-Apr-2016 12:24:21 [info]   "file_id" : "571123c460b228893c3dd142",
15-Apr-2016 12:24:21 [info]   "previews" : [ {
15-Apr-2016 12:24:21 [info]     "pv_route" : "/api/previews/571123c460b228893c3dd147",
15-Apr-2016 12:24:21 [info]     "p_main" : "thumbnail-previewer.js",
15-Apr-2016 12:24:21 [info]     "pv_id" : "571123c460b228893c3dd147",
15-Apr-2016 12:24:21 [info]     "p_path" : "/assets/javascripts/previewers/thumbnail",
15-Apr-2016 12:24:21 [info]     "p_id" : "Thumbnail",
15-Apr-2016 12:24:21 [info]     "pv_length" : "9757",
15-Apr-2016 12:24:21 [info]     "pv_contenttype" : "image/jpeg"
15-Apr-2016 12:24:21 [info]   } ]
15-Apr-2016 12:24:21 [info] } ]
15-Apr-2016 12:24:21 [info] - must respond to the list() function routed by GET /api/previews
15-Apr-2016 12:24:21 [info]   + Status=200
15-Apr-2016 12:24:21 [info]   + contentType=Some(application/json)
15-Apr-2016 12:24:21 [info]   + content[{"id":"571123c460b228893c3dd147","filename":"morrowplots-preview.jpg","contentType":"image/jpeg"}]
15-Apr-2016 12:24:21 [info] - must respond to the removePreview(id:UUID) function routed by DELETE /api/previews/:id for morrowplots preview file
15-Apr-2016 12:24:21 [info]   + Status_Get=200
15-Apr-2016 12:24:21 [info]   + contentType_Get=Some(application/json)
15-Apr-2016 12:24:21 [info]   + Pretty JSON format
15-Apr-2016 12:24:21 [info]   + {
15-Apr-2016 12:24:21 [info]   "status" : "success"
15-Apr-2016 12:24:21 [info] }
15-Apr-2016 12:24:21 2016-04-15 12:24:21,774 - [DEBUG  ] - application - Deleting file from indexesmorrowplots.jpg
15-Apr-2016 12:24:21 2016-04-15 12:24:21,775 - [DEBUG  ] - application - Deleting file: morrowplots.jpg
15-Apr-2016 12:24:21 [info] - must respond to the removeFile(id:UUID) function routed by DELETE /api/files/:id 
15-Apr-2016 12:24:21 [info]   + Status_Get=200
15-Apr-2016 12:24:21 [info]   + contentType_Get=Some(application/json)
15-Apr-2016 12:24:21 [info]   + Pretty JSON format
15-Apr-2016 12:24:21 [info]   + {
15-Apr-2016 12:24:21 [info]   "status" : "success"
15-Apr-2016 12:24:21 [info] }
15-Apr-2016 12:24:21 [info] ApplicationSpec:
15-Apr-2016 12:24:21 [info] The Application API Spec
15-Apr-2016 12:24:21 [info] - must provide a FakeApplication
15-Apr-2016 12:24:21 [info] - must make the FakeApplication available implicitly
15-Apr-2016 12:24:21 [info] - must start the FakeApplication
15-Apr-2016 12:24:21 [info] - must send 404 on a bad request
15-Apr-2016 12:24:21 2016-04-15 12:24:21,847 - [DEBUG  ] - application - Getting value for display.name
15-Apr-2016 12:24:21 2016-04-15 12:24:21,849 - [DEBUG  ] - application - Getting value for welcome.message
15-Apr-2016 12:24:21 2016-04-15 12:24:21,861 - [DEBUG  ] - application - Getting value for theme
15-Apr-2016 12:24:22 2016-04-15 12:24:22,424 - [DEBUG  ] - application - Getting value for display.name
15-Apr-2016 12:24:22 2016-04-15 12:24:22,431 - [DEBUG  ] - application - [securesocial] bootstrap path = securesocial/bootstrap/css/bootstrap.min.css
15-Apr-2016 12:24:22 2016-04-15 12:24:22,432 - [DEBUG  ] - application - [securesocial] assets controller = controllers.ReverseAssets
15-Apr-2016 12:24:22 2016-04-15 12:24:22,433 - [DEBUG  ] - application - [securesocial] favicon path = securesocial/images/favicon.png
15-Apr-2016 12:24:22 2016-04-15 12:24:22,434 - [DEBUG  ] - application - [securesocial] Jquery path = securesocial/javascripts/jquery-1.7.1.min.js
15-Apr-2016 12:24:22 2016-04-15 12:24:22,434 - [DEBUG  ] - application - [securesocial] custom css path = None
15-Apr-2016 12:24:22 2016-04-15 12:24:22,439 - [DEBUG  ] - application - Getting value for google.analytics
15-Apr-2016 12:24:22 [info] - must render the index page
15-Apr-2016 12:24:22 2016-04-15 12:24:22,445 - [DEBUG  ] - application - Getting value for theme
15-Apr-2016 12:24:22 2016-04-15 12:24:22,892 - [DEBUG  ] - application - Getting value for display.name
15-Apr-2016 12:24:22 2016-04-15 12:24:22,893 - [DEBUG  ] - application - Getting value for google.analytics
15-Apr-2016 12:24:22 [info] - must render index template
15-Apr-2016 12:24:22 2016-04-15 12:24:22,900 - [INFO   ] - application - Staging Area Plugin has stopped
15-Apr-2016 12:24:22 2016-04-15 12:24:22,901 - [INFO   ] - application - [securesocial] unloaded event listener SecureSocialEventListener
15-Apr-2016 12:24:22 2016-04-15 12:24:22,913 - [INFO   ] - application - [securesocial] unloaded identity provider: userpass
15-Apr-2016 12:24:22 2016-04-15 12:24:22,913 - [INFO   ] - application - Application shutdown
15-Apr-2016 12:24:22 2016-04-15 12:24:22,914 - [INFO   ] - application - [securesocial] unloaded password hasher bcrypt
15-Apr-2016 12:24:22 2016-04-15 12:24:22,920 - [INFO   ] - play - Shutdown application default Akka system.
15-Apr-2016 12:24:22 2016-04-15 12:24:22,965 - [DEBUG  ] - application - SwaggerPlugin.onStop
15-Apr-2016 12:24:23 [info] ScalaTest
15-Apr-2016 12:24:23 [info] Run completed in 17 seconds, 242 milliseconds.
15-Apr-2016 12:24:23 [info] Total number of tests run: 83
15-Apr-2016 12:24:23 [info] Suites: completed 7, aborted 0
15-Apr-2016 12:24:23 [info] Tests: succeeded 83, failed 0, canceled 0, ignored 0, pending 0
15-Apr-2016 12:24:23 [info] All tests passed.
15-Apr-2016 12:24:23 [info] Passed: Total 6, Failed 0, Errors 0, Passed 6
15-Apr-2016 12:24:23 [success] Total time: 61 s, completed Apr 15, 2016 12:24:23 PM
15-Apr-2016 12:24:23 Finished task 'test' with result: Success
15-Apr-2016 12:24:23
Substituting variable: ${bamboo.buildNumber} with 1
15-Apr-2016 12:24:23 Starting task 'doc' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.command'
15-Apr-2016 12:24:23
Beginning to execute external process for build 'Clowder - CORE - bugfix-SEAD-991-staging-area-select-repository-and - default #1 (CATS-CORE451-JOB1-1)'
... running command line:
/home/bamboo/sbt-0.13.2/bin/sbt doc
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1
... using extra environment variables:
bamboo_planRepository_1_branch=bugfix/SEAD-991-staging-area-select-repository-and
bamboo_repository_113377310_revision_number=73ed024448334c22e98797c3ee8953f3d834dcbf
bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_repository_revision_number=73ed024448334c22e98797c3ee8953f3d834dcbf
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE451-JOB1-1
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_15=/bin/sh /tmp/CATS-CORE451-JOB1-1-ScriptBuildTask-6566722542025861013.sh
JAVA_OPTS=-Dbamboo.buildNumber=1
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_11=/home/bamboo/sbt-0.13.2/bin/sbt clean update
bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build
bamboo_planRepository_1_name=clowder
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1
bamboo_buildKey=CATS-CORE451-JOB1
bamboo_capability_system_os=linux
bamboo_shortPlanName=bugfix-SEAD-991-staging-area-select-repository-and
bamboo_planRepository_name=clowder
bamboo_buildNumber=1
bamboo_shortJobName=default
bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE451-JOB1-1
bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_agentId=106758145
bamboo_planName=Clowder - CORE - bugfix-SEAD-991-staging-area-select-repository-and
bamboo_shortPlanKey=CORE451
bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
bamboo_repository_113377310_branch_name=bugfix/SEAD-991-staging-area-select-repository-and
bamboo_shortJobKey=JOB1
bamboo_planRepository_revision=73ed024448334c22e98797c3ee8953f3d834dcbf
bamboo_buildTimeStamp=2016-04-15T12:18:33.083-05:00
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
bamboo_buildResultKey=CATS-CORE451-JOB1-1
bamboo_repository_git_branch=bugfix/SEAD-991-staging-area-select-repository-and
bamboo_repository_branch_name=bugfix/SEAD-991-staging-area-select-repository-and
bamboo_buildPlanName=Clowder - CORE - bugfix-SEAD-991-staging-area-select-repository-and - default
bamboo_planRepository_1_revision=73ed024448334c22e98797c3ee8953f3d834dcbf
bamboo_repository_name=clowder
bamboo_repository_113377310_name=clowder
bamboo_capability_system_docker_executable=/usr/bin/docker
bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt
bamboo_planRepository_branch=bugfix/SEAD-991-staging-area-select-repository-and
bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir
bamboo_capability_system_git_executable=/usr/bin/git
bamboo_repository_git_username=
bamboo_repository_113377310_git_username=
bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs
bamboo_planRepository_1_type=stash-rep
bamboo_planRepository_branchName=bugfix/SEAD-991-staging-area-select-repository-and
bamboo_capability_system_hostname=buildserver-2
bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_software_mongo=/usr/bin/mongo
bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl
bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs
bamboo_repository_113377310_git_branch=bugfix/SEAD-991-staging-area-select-repository-and
bamboo_planRepository_type=stash-rep
bamboo_planRepository_1_username=
bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66
bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_7=/home/bamboo/sbt-0.13.2/bin/sbt compile
bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4
bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.2.1
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_8=/home/bamboo/sbt-0.13.2/bin/sbt test-only integration.APITestSuite
bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1
bamboo_planKey=CATS-CORE451
bamboo_repository_113377310_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_planRepository_username=
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_planRepository_1_branchName=bugfix/SEAD-991-staging-area-select-repository-and
15-Apr-2016 12:24:23 Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=384M; support was removed in 8.0
15-Apr-2016 12:24:27 [info] Loading project definition from /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/project
15-Apr-2016 12:24:29 [info] Set current project to clowder (in build file:/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/)
15-Apr-2016 12:24:31 [info] Main Scala API documentation to /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/target/scala-2.10/api...
15-Apr-2016 12:25:10 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/Global.scala:48: postfix operator minutes should be enabled
15-Apr-2016 12:25:10 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:10 [warn] This can be achieved by adding the import clause 'import scala.language.postfixOps'
15-Apr-2016 12:25:10 [warn] or by setting the compiler option -language:postfixOps.
15-Apr-2016 12:25:10 [warn] See the Scala docs for value scala.language.postfixOps for a discussion
15-Apr-2016 12:25:10 [warn] why the feature should be explicitly enabled.
15-Apr-2016 12:25:10 [warn]       extractorTimer = Akka.system().scheduler.schedule(0 minutes, 5 minutes) {
15-Apr-2016 12:25:10 [warn]                                                           ^
15-Apr-2016 12:25:10 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/Global.scala:48: postfix operator minutes should be enabled
15-Apr-2016 12:25:10 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:10 [warn]       extractorTimer = Akka.system().scheduler.schedule(0 minutes, 5 minutes) {
15-Apr-2016 12:25:10 [warn]                                                                      ^
15-Apr-2016 12:25:10 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/Global.scala:55: postfix operator minutes should be enabled
15-Apr-2016 12:25:10 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:10 [warn]       jobTimer = Akka.system().scheduler.schedule(0 minutes, 1 minutes) {
15-Apr-2016 12:25:10 [warn]                                                     ^
15-Apr-2016 12:25:10 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/Global.scala:55: postfix operator minutes should be enabled
15-Apr-2016 12:25:10 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:10 [warn]       jobTimer = Akka.system().scheduler.schedule(0 minutes, 1 minutes) {
15-Apr-2016 12:25:10 [warn]                                                                ^
15-Apr-2016 12:25:11 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/api/Admin.scala:153: postfix operator seconds should be enabled
15-Apr-2016 12:25:11 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:11 [warn]     Akka.system.scheduler.scheduleOnce(1 seconds) {
15-Apr-2016 12:25:11 [warn]                                          ^
15-Apr-2016 12:25:12 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/api/Collections.scala:535: a pure expression does nothing in statement position; you may be omitting necessary parentheses
15-Apr-2016 12:25:12 [warn]           return true
15-Apr-2016 12:25:12 [warn]                  ^
15-Apr-2016 12:25:12 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/api/Collections.scala:535: enclosing method isCollectionRootOrHasNoParent has result type Unit: return value discarded
15-Apr-2016 12:25:12 [warn]           return true
15-Apr-2016 12:25:12 [warn]           ^
15-Apr-2016 12:25:12 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/api/Collections.scala:537: a pure expression does nothing in statement position; you may be omitting necessary parentheses
15-Apr-2016 12:25:12 [warn]           return false
15-Apr-2016 12:25:12 [warn]                  ^
15-Apr-2016 12:25:12 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/api/Collections.scala:537: enclosing method isCollectionRootOrHasNoParent has result type Unit: return value discarded
15-Apr-2016 12:25:12 [warn]           return false
15-Apr-2016 12:25:12 [warn]           ^
15-Apr-2016 12:25:14 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/api/CurationObjects.scala:126: postfix operator toList should be enabled
15-Apr-2016 12:25:14 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:14 [warn]             metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
15-Apr-2016 12:25:14 [warn]                                                                                                                                ^
15-Apr-2016 12:25:18 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/api/Files.scala:23: imported `Files' is permanently hidden by definition of class Files in package api
15-Apr-2016 12:25:18 [warn] import play.api.libs.Files
15-Apr-2016 12:25:18 [warn]                      ^
15-Apr-2016 12:25:19 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/api/Files.scala:796: @deprecated now takes two arguments; see the scaladoc.
15-Apr-2016 12:25:19 [warn]   @deprecated
15-Apr-2016 12:25:19 [warn]    ^
15-Apr-2016 12:25:22 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/api/Geostreams.scala:43: postfix operator tupled should be enabled
15-Apr-2016 12:25:22 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:22 [warn]   ) tupled
15-Apr-2016 12:25:22 [warn]     ^
15-Apr-2016 12:25:22 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/api/Geostreams.scala:51: postfix operator tupled should be enabled
15-Apr-2016 12:25:22 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:22 [warn]   ) tupled
15-Apr-2016 12:25:22 [warn]     ^
15-Apr-2016 12:25:22 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/api/Geostreams.scala:60: postfix operator tupled should be enabled
15-Apr-2016 12:25:22 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:22 [warn]   ) tupled
15-Apr-2016 12:25:22 [warn]     ^
15-Apr-2016 12:25:22 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBInstitutionService.scala:3: imported `Institution' is permanently hidden by definition of object Institution in package mongodb
15-Apr-2016 12:25:22 [warn] import models.Institution
15-Apr-2016 12:25:22 [warn]               ^
15-Apr-2016 12:25:23 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBProjectService.scala:3: imported `Project' is permanently hidden by definition of object Project in package mongodb
15-Apr-2016 12:25:23 [warn] import models.Project
15-Apr-2016 12:25:23 [warn]               ^
15-Apr-2016 12:25:28 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/controllers/CurationObjects.scala:344: postfix operator toList should be enabled
15-Apr-2016 12:25:28 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:28 [warn]       metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
15-Apr-2016 12:25:28 [warn]                                                                                                                          ^
15-Apr-2016 12:25:28 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/controllers/CurationObjects.scala:561: postfix operator toList should be enabled
15-Apr-2016 12:25:28 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:28 [warn]             metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
15-Apr-2016 12:25:28 [warn]                                                                                                                                ^
15-Apr-2016 12:25:30 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/controllers/Registration.scala:13: imported `Registration' is permanently hidden by definition of class Registration in package controllers
15-Apr-2016 12:25:30 [warn] import securesocial.controllers.{ProviderController, Registration, TemplatesPlugin}
15-Apr-2016 12:25:30 [warn]                                                      ^
15-Apr-2016 12:25:30 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/controllers/Registration.scala:57: reflective access of structural type member value currentHasher should be enabled
15-Apr-2016 12:25:30 [warn] by making the implicit value scala.language.reflectiveCalls visible.
15-Apr-2016 12:25:30 [warn] This can be achieved by adding the import clause 'import scala.language.reflectiveCalls'
15-Apr-2016 12:25:30 [warn] or by setting the compiler option -language:reflectiveCalls.
15-Apr-2016 12:25:30 [warn] See the Scala docs for value scala.language.reflectiveCalls for a discussion
15-Apr-2016 12:25:30 [warn] why the feature should be explicitly enabled.
15-Apr-2016 12:25:30 [warn]                 passwordInfo = Some(Registry.hashers.currentHasher.hash(info.password))
15-Apr-2016 12:25:30 [warn]                                                      ^
15-Apr-2016 12:25:33 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/models/UUID.scala:36: implicit conversion method stringToUUID should be enabled
15-Apr-2016 12:25:33 [warn] by making the implicit value scala.language.implicitConversions visible.
15-Apr-2016 12:25:33 [warn] This can be achieved by adding the import clause 'import scala.language.implicitConversions'
15-Apr-2016 12:25:33 [warn] or by setting the compiler option -language:implicitConversions.
15-Apr-2016 12:25:33 [warn] See the Scala docs for value scala.language.implicitConversions for a discussion
15-Apr-2016 12:25:33 [warn] why the feature should be explicitly enabled.
15-Apr-2016 12:25:33 [warn]   implicit def stringToUUID(s: String) = UUID(s)
15-Apr-2016 12:25:33 [warn]                ^
15-Apr-2016 12:25:33 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/models/UUID.scala:37: implicit conversion method uuidToObjectId should be enabled
15-Apr-2016 12:25:33 [warn] by making the implicit value scala.language.implicitConversions visible.
15-Apr-2016 12:25:33 [warn]   implicit def uuidToObjectId(uuid: UUID) = new ObjectId(uuid.stringify)
15-Apr-2016 12:25:33 [warn]                ^
15-Apr-2016 12:25:33 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/models/UUID.scala:38: implicit conversion method objectIdToUUID should be enabled
15-Apr-2016 12:25:33 [warn] by making the implicit value scala.language.implicitConversions visible.
15-Apr-2016 12:25:33 [warn]   implicit def objectIdToUUID(objectId: ObjectId) = UUID(objectId.toString)
15-Apr-2016 12:25:33 [warn]                ^
15-Apr-2016 12:25:34 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/models/User.scala:75: implicit conversion method userToMiniUser should be enabled
15-Apr-2016 12:25:34 [warn] by making the implicit value scala.language.implicitConversions visible.
15-Apr-2016 12:25:34 [warn]   implicit def userToMiniUser(x: User): MiniUser = x.getMiniUser
15-Apr-2016 12:25:34 [warn]                ^
15-Apr-2016 12:25:35 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/PolyglotPlugin.scala:83: postfix operator seconds should be enabled
15-Apr-2016 12:25:35 [warn] by making the implicit value scala.language.postfixOps visible.
15-Apr-2016 12:25:35 [warn]           akka.pattern.after(3 seconds, using = Akka.system.scheduler)(checkForFileAndDownload((triesLeft - 1), url, outputStream))
15-Apr-2016 12:25:35 [warn]                                ^
15-Apr-2016 12:25:36 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoContext.scala:253: implicit conversion method dbObjectToString should be enabled
15-Apr-2016 12:25:36 [warn] by making the implicit value scala.language.implicitConversions visible.
15-Apr-2016 12:25:36 [warn]   implicit def dbObjectToString(dbObject: DBObject): String = {
15-Apr-2016 12:25:36 [warn]                ^
15-Apr-2016 12:25:36 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBCollectionService.scala:11: imported `Collection' is permanently hidden by definition of object Collection in package mongodb
15-Apr-2016 12:25:36 [warn] import models.{User, UUID, Collection, Dataset}
15-Apr-2016 12:25:36 [warn]                            ^
15-Apr-2016 12:25:36 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBCollectionService.scala:11: imported `Dataset' is permanently hidden by definition of object Dataset in package mongodb
15-Apr-2016 12:25:36 [warn] import models.{User, UUID, Collection, Dataset}
15-Apr-2016 12:25:36 [warn]                                        ^
15-Apr-2016 12:25:37 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBCommentService.scala:3: imported `Comment' is permanently hidden by definition of object Comment in package mongodb
15-Apr-2016 12:25:37 [warn] import models.{UUID, Comment}
15-Apr-2016 12:25:37 [warn]                      ^
15-Apr-2016 12:25:38 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBTagService.scala:7: imported `Tag' is permanently hidden by definition of object Tag in package mongodb
15-Apr-2016 12:25:38 [warn] import models.{Tag, UUID}
15-Apr-2016 12:25:38 [warn]                ^
15-Apr-2016 12:25:39 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBExtractionRequestsService.scala:20: imported `MongoSalatPlugin' is permanently hidden by definition of class MongoSalatPlugin in package mongodb
15-Apr-2016 12:25:39 [warn] import services.mongodb.MongoSalatPlugin
15-Apr-2016 12:25:39 [warn]                         ^
15-Apr-2016 12:25:39 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBExtractionService.scala:4: imported `Extraction' is permanently hidden by definition of object Extraction in package mongodb
15-Apr-2016 12:25:39 [warn] import models.{UUID, Extraction}
15-Apr-2016 12:25:39 [warn]                      ^
15-Apr-2016 12:25:39 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBExtractionService.scala:13: imported `WebPageResource' is permanently hidden by definition of object WebPageResource in package mongodb
15-Apr-2016 12:25:39 [warn] import models.WebPageResource
15-Apr-2016 12:25:39 [warn]               ^
15-Apr-2016 12:25:41 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBSectionService.scala:4: imported `Tag' is permanently hidden by definition of object Tag in package mongodb
15-Apr-2016 12:25:41 [warn] import models.{UUID, Tag, Comment, Section}
15-Apr-2016 12:25:41 [warn]                      ^
15-Apr-2016 12:25:41 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBSectionService.scala:4: imported `Comment' is permanently hidden by definition of object Comment in package mongodb
15-Apr-2016 12:25:41 [warn] import models.{UUID, Tag, Comment, Section}
15-Apr-2016 12:25:41 [warn]                           ^
15-Apr-2016 12:25:42 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBSpaceService.scala:24: imported `Collection' is permanently hidden by definition of object Collection in package mongodb
15-Apr-2016 12:25:42 [warn] import models.Collection
15-Apr-2016 12:25:42 [warn]               ^
15-Apr-2016 12:25:42 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/mongodb/MongoDBSpaceService.scala:25: imported `Dataset' is permanently hidden by definition of object Dataset in package mongodb
15-Apr-2016 12:25:42 [warn] import models.Dataset
15-Apr-2016 12:25:42 [warn]               ^
15-Apr-2016 12:26:04 model contains 796 documentable templates
15-Apr-2016 12:26:11 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/app/services/irods/IRODSPlugin.scala:9: Tag '@date' is not recognised
15-Apr-2016 12:26:11 [warn] /**
15-Apr-2016 12:26:11 [warn] ^
15-Apr-2016 12:26:26 [warn] 39 warnings found
15-Apr-2016 12:26:26 [info] Main Scala API documentation successful.
15-Apr-2016 12:26:26 [success] Total time: 116 s, completed Apr 15, 2016 12:26:26 PM
15-Apr-2016 12:26:26 Finished task 'doc' with result: Success
15-Apr-2016 12:26:26
Substituting variable: ${bamboo.buildNumber} with 1
15-Apr-2016 12:26:26 Starting task 'dist' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.command'
15-Apr-2016 12:26:26
Beginning to execute external process for build 'Clowder - CORE - bugfix-SEAD-991-staging-area-select-repository-and - default #1 (CATS-CORE451-JOB1-1)'
... running command line:
/home/bamboo/sbt-0.13.2/bin/sbt dist
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1
... using extra environment variables:
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bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_repository_revision_number=73ed024448334c22e98797c3ee8953f3d834dcbf
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bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_15=/bin/sh /tmp/CATS-CORE451-JOB1-1-ScriptBuildTask-6566722542025861013.sh
JAVA_OPTS=-Dbamboo.buildNumber=1
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_11=/home/bamboo/sbt-0.13.2/bin/sbt clean update
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bamboo_planRepository_1_name=clowder
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1
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bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
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bamboo_planRepository_revision=73ed024448334c22e98797c3ee8953f3d834dcbf
bamboo_buildTimeStamp=2016-04-15T12:18:33.083-05:00
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
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bamboo_repository_name=clowder
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15-Apr-2016 12:26:26 Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=384M; support was removed in 8.0
15-Apr-2016 12:26:30 [info] Loading project definition from /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/project
15-Apr-2016 12:26:32 [info] Set current project to clowder (in build file:/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/)
15-Apr-2016 12:26:33 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/target/scala-2.10/clowder_2.10-0.9.2-SNAPSHOT-sources.jar ...
15-Apr-2016 12:26:33 [info] Done packaging.
15-Apr-2016 12:26:33 [info] Wrote /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/target/scala-2.10/clowder_2.10-0.9.2-SNAPSHOT.pom
15-Apr-2016 12:26:34 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/target/scala-2.10/clowder_2.10-0.9.2-SNAPSHOT-javadoc.jar ...
15-Apr-2016 12:26:36 [info] Done packaging.
15-Apr-2016 12:26:36 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/target/scala-2.10/clowder_2.10-0.9.2-SNAPSHOT.jar ...
15-Apr-2016 12:26:40 [info] Done packaging.
15-Apr-2016 12:26:55 [info]
15-Apr-2016 12:26:55 [info] Your package is ready in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/target/universal/clowder-0.9.2-SNAPSHOT.zip
15-Apr-2016 12:26:55 [info]
15-Apr-2016 12:26:55 [success] Total time: 23 s, completed Apr 15, 2016 12:26:55 PM
15-Apr-2016 12:26:56 Finished task 'dist' with result: Success
15-Apr-2016 12:26:56 Starting task 'sphinx' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.command'
15-Apr-2016 12:26:56
Beginning to execute external process for build 'Clowder - CORE - bugfix-SEAD-991-staging-area-select-repository-and - default #1 (CATS-CORE451-JOB1-1)'
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15-Apr-2016 12:26:57 Making output directory...
15-Apr-2016 12:26:57 Running Sphinx v1.2.2
15-Apr-2016 12:26:57 loading pickled environment... not yet created
15-Apr-2016 12:26:57 building [html]: targets for 12 source files that are out of date
15-Apr-2016 12:26:57 updating environment: 12 added, 0 changed, 0 removed
15-Apr-2016 12:26:57 reading sources... [  8%] api
15-Apr-2016 12:26:57 reading sources... [ 16%] architecture
15-Apr-2016 12:26:57 reading sources... [ 25%] extractors
15-Apr-2016 12:26:57 reading sources... [ 33%] index
15-Apr-2016 12:26:57 reading sources... [ 41%] installation
15-Apr-2016 12:26:57 reading sources... [ 50%] license
15-Apr-2016 12:26:57 reading sources... [ 58%] overview
15-Apr-2016 12:26:57 reading sources... [ 66%] previewers
15-Apr-2016 12:26:57 reading sources... [ 75%] setup
15-Apr-2016 12:26:57 reading sources... [ 83%] setup_dev
15-Apr-2016 12:26:58 reading sources... [ 91%] source
15-Apr-2016 12:26:58 reading sources... [100%] thankyou
15-Apr-2016 12:26:58
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/license.rst:10: WARNING: Title underline too short.
15-Apr-2016 12:26:58
15-Apr-2016 12:26:58 looking for now-outdated files... none found
15-Apr-2016 12:26:58 Contributors
15-Apr-2016 12:26:58 -------
15-Apr-2016 12:26:58 pickling environment... done
15-Apr-2016 12:26:58 checking consistency... done
15-Apr-2016 12:26:58 preparing documents... done
15-Apr-2016 12:26:58 writing output... [  8%] api
15-Apr-2016 12:26:58 writing output... [ 16%] architecture
15-Apr-2016 12:26:58 writing output... [ 25%] extractors
15-Apr-2016 12:26:58 writing output... [ 33%] index
15-Apr-2016 12:26:58 writing output... [ 41%] installation
15-Apr-2016 12:26:58 writing output... [ 50%] license
15-Apr-2016 12:26:58 writing output... [ 58%] overview
15-Apr-2016 12:26:58 writing output... [ 66%] previewers
15-Apr-2016 12:26:58 writing output... [ 75%] setup
15-Apr-2016 12:26:58 writing output... [ 83%] setup_dev
15-Apr-2016 12:26:58 writing output... [ 91%] source
15-Apr-2016 12:26:58 writing output... [100%] thankyou
15-Apr-2016 12:26:58
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
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15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
15-Apr-2016 12:26:58 writing additional files... genindex search
15-Apr-2016 12:26:58 copying images... [ 20%] _static/dataset.png
15-Apr-2016 12:26:58 copying images... [ 40%] _static/data-model.jpg
15-Apr-2016 12:26:58 copying images... [ 60%] _static/extraction.jpg
15-Apr-2016 12:26:58 copying images... [ 80%] _static/architecture.jpg
15-Apr-2016 12:26:58 copying images... [100%] _static/logo_full.png
15-Apr-2016 12:26:58
15-Apr-2016 12:26:59 copying static files... done
15-Apr-2016 12:26:59 copying extra files... done
15-Apr-2016 12:26:59 dumping search index... done
15-Apr-2016 12:26:59 dumping object inventory... done
15-Apr-2016 12:26:59 build succeeded, 31 warnings.
15-Apr-2016 12:26:59 Finished task 'sphinx' with result: Success
15-Apr-2016 12:26:59 Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
15-Apr-2016 12:26:59
Beginning to execute external process for build 'Clowder - CORE - bugfix-SEAD-991-staging-area-select-repository-and - default #1 (CATS-CORE451-JOB1-1)'
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bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_8=/home/bamboo/sbt-0.13.2/bin/sbt test-only integration.APITestSuite
bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1
bamboo_planKey=CATS-CORE451
bamboo_repository_113377310_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_planRepository_username=
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_planRepository_1_branchName=bugfix/SEAD-991-staging-area-select-repository-and
15-Apr-2016 12:27:01 Sending build context to Docker daemon 557.1 kB
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15-Apr-2016 12:27:03
15-Apr-2016 12:27:03 Step 1 : FROM java:8-jre
15-Apr-2016 12:27:04 8-jre: Pulling from library/java
15-Apr-2016 12:27:04 efd26ecc9548: Already exists
15-Apr-2016 12:27:04 a3ed95caeb02: Already exists
15-Apr-2016 12:27:04 d1784d73276e: Already exists
15-Apr-2016 12:27:04 52a884c93bb2: Already exists
15-Apr-2016 12:27:04 070ee56a6f7e: Already exists
15-Apr-2016 12:27:04 a3ed95caeb02: Already exists
15-Apr-2016 12:27:04 f8b8b1302b4f: Already exists
15-Apr-2016 12:27:04 a3ed95caeb02: Already exists
15-Apr-2016 12:27:04 a3ed95caeb02: Already exists
15-Apr-2016 12:27:04 a3ed95caeb02: Already exists
15-Apr-2016 12:27:04 a3ed95caeb02: Already exists
15-Apr-2016 12:27:04 e71221cc9598: Already exists
15-Apr-2016 12:27:04 349c9e35d503: Already exists
15-Apr-2016 12:27:04 Digest: sha256:59f5607caf2d84109e00f118d60bf803360ce73cdfd1c4bc1c420dee6d1ac18c
15-Apr-2016 12:27:04 Status: Image is up to date for java:8-jre
15-Apr-2016 12:27:04 ---> 570b0e0945fe
15-Apr-2016 12:27:04 Step 2 : MAINTAINER Rob Kooper <kooper@illinois.edu>
15-Apr-2016 12:27:04 ---> Using cache
15-Apr-2016 12:27:04 ---> 2a16135761ac
15-Apr-2016 12:27:04 Step 3 : EXPOSE 9000
15-Apr-2016 12:27:04 ---> Using cache
15-Apr-2016 12:27:04 ---> 1e993780b972
15-Apr-2016 12:27:04 Step 4 : ENV CLOWDER_CONTEXT "/" CLOWDER_ADMINS "" MONGO_URI "" SMTP_HOST "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_URI "" RABBITMQ_MGMT_PORT "" ELASTICSEARCH_SERVICE_CLUSTERNAME "clowder" ELASTICSEARCH_SERVICE_SERVER "" ELASTICSEARCH_SERVICE_PORT "" TOOLMANAGER_URI ""
15-Apr-2016 12:27:04 ---> Using cache
15-Apr-2016 12:27:04 ---> 79f8641c5905
15-Apr-2016 12:27:04 Step 5 : RUN useradd -s /bin/bash clowder
15-Apr-2016 12:27:04 ---> Using cache
15-Apr-2016 12:27:04 ---> c14e6fc0fca0
15-Apr-2016 12:27:04 Step 6 : COPY files entrypoint.sh /home/clowder/
15-Apr-2016 12:27:09 ---> 65fb36347d2d
15-Apr-2016 12:27:09 Removing intermediate container 8f1508d24590
15-Apr-2016 12:27:09 Step 7 : RUN chown -R clowder /home/clowder/clowder
15-Apr-2016 12:27:10 ---> Running in 779137a6f0fa
15-Apr-2016 12:27:14 ---> e959ed3259fc
15-Apr-2016 12:27:14 Removing intermediate container 779137a6f0fa
15-Apr-2016 12:27:14 Step 8 : ENTRYPOINT /home/clowder/entrypoint.sh
15-Apr-2016 12:27:15 ---> Running in 1c50046f3e91
15-Apr-2016 12:27:15 ---> 307f2ffc6bc7
15-Apr-2016 12:27:15 Removing intermediate container 1c50046f3e91
15-Apr-2016 12:27:15 Step 9 : CMD server
15-Apr-2016 12:27:15 ---> Running in fdcfcec0b2e5
15-Apr-2016 12:27:15 ---> 7733c34c6505
15-Apr-2016 12:27:15 Removing intermediate container fdcfcec0b2e5
15-Apr-2016 12:27:15 Step 10 : USER clowder
15-Apr-2016 12:27:15 ---> Running in 66a7c1bd2a60
15-Apr-2016 12:27:15 ---> 89a3158957b9
15-Apr-2016 12:27:15 Removing intermediate container 66a7c1bd2a60
15-Apr-2016 12:27:15 Successfully built 89a3158957b9
15-Apr-2016 12:27:15 Sending build context to Docker daemon 22.02 kB
15-Apr-2016 12:27:15
15-Apr-2016 12:27:15 Step 1 : FROM ubuntu
15-Apr-2016 12:27:16 latest: Pulling from library/ubuntu
15-Apr-2016 12:27:16 759d6771041e: Already exists
15-Apr-2016 12:27:16 8836b825667b: Already exists
15-Apr-2016 12:27:16 c2f5e51744e6: Already exists
15-Apr-2016 12:27:16 a3ed95caeb02: Already exists
15-Apr-2016 12:27:16 Digest: sha256:b4dbab2d8029edddfe494f42183de20b7e2e871a424ff16ffe7b15a31f102536
15-Apr-2016 12:27:16 Status: Image is up to date for ubuntu:latest
15-Apr-2016 12:27:16 ---> b72889fa879c
15-Apr-2016 12:27:16 Step 2 : RUN apt-get -y update     && apt-get -y install curl unzip docker.io python python-dev python-pip     && pip install flask-restful     && pip install arrow     && apt-get clean all     && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*     ;
15-Apr-2016 12:27:16 ---> Using cache
15-Apr-2016 12:27:16 ---> 3e6f6f080222
15-Apr-2016 12:27:16 Step 3 : COPY FILES.toolserver /
15-Apr-2016 12:27:16 ---> Using cache
15-Apr-2016 12:27:16 ---> 56c89d7276cb
15-Apr-2016 12:27:16 Step 4 : ENV TOOLSERVER_PORT 8082
15-Apr-2016 12:27:16 ---> Using cache
15-Apr-2016 12:27:16 ---> 7f7e3c688f33
15-Apr-2016 12:27:16 Step 5 : CMD /usr/local/bin/usage
15-Apr-2016 12:27:16 ---> Using cache
15-Apr-2016 12:27:16 ---> 207f53c2e7cb
15-Apr-2016 12:27:16 Successfully built 207f53c2e7cb
15-Apr-2016 12:27:16 Tagged clowder toolserver with local
15-Apr-2016 12:27:16 Untagged: toolserver-17307:latest
15-Apr-2016 12:27:16 Untagged: clowder-17307:latest
15-Apr-2016 12:27:16 Finished task 'docker build' with result: Success
15-Apr-2016 12:27:16 Starting task 'junit' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit'
15-Apr-2016 12:27:16 Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE451-JOB1...
15-Apr-2016 12:27:16 Finished task 'junit' with result: Success
15-Apr-2016 12:27:16 Running post build plugin 'Docker Container Cleanup'
15-Apr-2016 12:27:16 Running post build plugin 'NCover Results Collector'
15-Apr-2016 12:27:16 Running post build plugin 'Clover Results Collector'
15-Apr-2016 12:27:16 Running post build plugin 'npm Cache Cleanup'
15-Apr-2016 12:27:16 Running post build plugin 'Artifact Copier'
15-Apr-2016 12:27:16 Publishing an artifact: dist
15-Apr-2016 12:27:26 Finished publishing of artifact Shared artifact: [dist], pattern: [clowder-*.zip] anchored at: [target/universal] in 9s
15-Apr-2016 12:27:26 Publishing an artifact: scaladoc
15-Apr-2016 12:27:28 Finished publishing of artifact Shared artifact: [scaladoc], pattern: [**/*] anchored at: [target/scala-2.10/api] in 1s
15-Apr-2016 12:27:28 Publishing an artifact: manual
15-Apr-2016 12:27:28 Finished publishing of artifact Shared artifact: [manual], pattern: [**/*] anchored at: [doc/src/sphinx/_build/html] in 0s
15-Apr-2016 12:27:28 Finalising the build...
15-Apr-2016 12:27:28 Stopping timer.
15-Apr-2016 12:27:28 Build CATS-CORE451-JOB1-1 completed.
15-Apr-2016 12:27:28 Running on server: post build plugin 'NCover Results Collector'
15-Apr-2016 12:27:28 Running on server: post build plugin 'Build Hanging Detection Configuration'
15-Apr-2016 12:27:28 Running on server: post build plugin 'Clover Delta Calculator'
15-Apr-2016 12:27:28 Running on server: post build plugin 'Maven Dependencies Postprocessor'
15-Apr-2016 12:27:28 All post build plugins have finished
15-Apr-2016 12:27:29 Generating build results summary...
15-Apr-2016 12:27:29 Saving build results to disk...
15-Apr-2016 12:27:29 Logging substituted variables...
15-Apr-2016 12:27:29 Indexing build results...
15-Apr-2016 12:27:29 Finished building CATS-CORE451-JOB1-1.