Core application including web front end

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  1. Default Stage

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07-Dec-2016 13:48:08 [info]   "spaces" : [ ]
07-Dec-2016 13:48:08 [info] }, {
07-Dec-2016 13:48:08 [info]   "id" : "5848677860b24d08b2e513b4",
07-Dec-2016 13:48:08 [info]   "name" : "Dataset 1 API Test Creation",
07-Dec-2016 13:48:08 [info]   "description" : "Part 1 of Dataset API Test Suite",
07-Dec-2016 13:48:08 [info]   "created" : "Wed Dec 07 13:48:08 CST 2016",
07-Dec-2016 13:48:08 [info]   "thumbnail" : "None",
07-Dec-2016 13:48:08 [info]   "authorId" : "000000000000000000000000",
07-Dec-2016 13:48:08 [info]   "spaces" : [ ]
07-Dec-2016 13:48:08 [info] } ]
07-Dec-2016 13:48:08 2016-12-07 13:48:08,663 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:08 2016-12-07 13:48:08,665 - [DEBUG  ] - application - Adding dataset 5848677860b24d08b2e513cc to collection 5848677860b24d08b2e513a9
07-Dec-2016 13:48:08 2016-12-07 13:48:08,669 - [DEBUG  ] - application - retmd: { }
07-Dec-2016 13:48:08 2016-12-07 13:48:08,669 - [DEBUG  ] - application - retmd: { }
07-Dec-2016 13:48:08 2016-12-07 13:48:08,670 - [DEBUG  ] - application - retmd: [ ]
07-Dec-2016 13:48:08 2016-12-07 13:48:08,676 - [DEBUG  ] - application - Adding dataset to collection completed
07-Dec-2016 13:48:08 [info] - must respond to the attachDataset(coll_id:UUID, ds_id:UUID) function routed by POST /api/collections/:coll_id/datasets/:ds_id for dataset 2
07-Dec-2016 13:48:08 [info]   + Status=200
07-Dec-2016 13:48:08 [info]   + contentType=Some(application/json)
07-Dec-2016 13:48:08 [info]   + contentAsString{"datasetsInCollection":2}
07-Dec-2016 13:48:08 2016-12-07 13:48:08,691 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:08 2016-12-07 13:48:08,694 - [DEBUG  ] - application - Removing dataset 5848677860b24d08b2e513cc from collection 5848677860b24d08b2e513a9
07-Dec-2016 13:48:08 2016-12-07 13:48:08,700 - [DEBUG  ] - application - retmd: { }
07-Dec-2016 13:48:08 2016-12-07 13:48:08,700 - [DEBUG  ] - application - retmd: { }
07-Dec-2016 13:48:08 2016-12-07 13:48:08,701 - [DEBUG  ] - application - retmd: [ ]
07-Dec-2016 13:48:08 2016-12-07 13:48:08,710 - [DEBUG  ] - application - Removing dataset from collection completed
07-Dec-2016 13:48:08 [info] - must respond to the removeDataset(coll_id:UUID, ds_id:UUID, ignoreNotFound) function routed by DELETE /api/collections/:coll_id/datasets/:ds_id for dataset 2
07-Dec-2016 13:48:08 [info]   + Status=200
07-Dec-2016 13:48:08 [info]   + contentType=Some(application/json)
07-Dec-2016 13:48:08 [info]   + contentAsString{"status":"success"}
07-Dec-2016 13:48:08 2016-12-07 13:48:08,724 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:08 2016-12-07 13:48:08,725 - [DEBUG  ] - application - Removing dataset 5848677860b24d08b2e513b4 from collection 5848677860b24d08b2e513a9
07-Dec-2016 13:48:08 2016-12-07 13:48:08,732 - [DEBUG  ] - application - retmd: { }
07-Dec-2016 13:48:08 2016-12-07 13:48:08,732 - [DEBUG  ] - application - retmd: { }
07-Dec-2016 13:48:08 2016-12-07 13:48:08,733 - [DEBUG  ] - application - retmd: [ ]
07-Dec-2016 13:48:08 2016-12-07 13:48:08,738 - [DEBUG  ] - application - Removing dataset from collection completed
07-Dec-2016 13:48:08 [info] - must respond to the removeDataset(coll_id:UUID, ds_id:UUID, ignoreNoteFound) function routed by POST /api/collections/:coll_id/datasets/:ds_id/:ignoreNotFound for dataset 2
07-Dec-2016 13:48:08 [info]   + Status=200
07-Dec-2016 13:48:08 [info]   + contentType=Some(application/json)
07-Dec-2016 13:48:08 [info]   + contentAsString{"status":"success"}
07-Dec-2016 13:48:08 2016-12-07 13:48:08,748 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:08 2016-12-07 13:48:08,750 - [DEBUG  ] - application - userdfSPARQLStore not enabled
07-Dec-2016 13:48:08 2016-12-07 13:48:08,758 - [DEBUG  ] - application - Removing XML metadata belonging to file 5848677860b24d08b2e513ac from dataset 5848677860b24d08b2e513b4.
07-Dec-2016 13:48:08 2016-12-07 13:48:08,786 - [ERROR  ] - application - File not found: 5848677860b24d08b2e513ac
07-Dec-2016 13:48:08 [info] - must respond to the deleteDataset(id:UUID) function routed by DELETE /api/datasets/:id for Dataset 1
07-Dec-2016 13:48:08 [info]   + Status_Get=200
07-Dec-2016 13:48:08 [info]   + contentType_Get=Some(application/json)
07-Dec-2016 13:48:08 [info]   + Pretty JSON format
07-Dec-2016 13:48:08 [info]   + {
07-Dec-2016 13:48:08 [info]   "status" : "success"
07-Dec-2016 13:48:08 [info] }
07-Dec-2016 13:48:08 2016-12-07 13:48:08,795 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:08 2016-12-07 13:48:08,796 - [DEBUG  ] - application - userdfSPARQLStore not enabled
07-Dec-2016 13:48:08 2016-12-07 13:48:08,803 - [DEBUG  ] - application - Removing XML metadata belonging to file 5848677860b24d08b2e513c4 from dataset 5848677860b24d08b2e513cc.
07-Dec-2016 13:48:08 2016-12-07 13:48:08,818 - [ERROR  ] - application - File not found: 5848677860b24d08b2e513c4
07-Dec-2016 13:48:08 [info] - must respond to the deleteDataset(id:UUID) function routed by DELETE /api/datasets/:id for Dataset 2
07-Dec-2016 13:48:08 [info]   + Status_Get=200
07-Dec-2016 13:48:08 [info]   + contentType_Get=Some(application/json)
07-Dec-2016 13:48:08 [info]   + Pretty JSON format
07-Dec-2016 13:48:08 [info]   + {
07-Dec-2016 13:48:08 [info]   "status" : "success"
07-Dec-2016 13:48:08 [info] }
07-Dec-2016 13:48:08 2016-12-07 13:48:08,829 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:08 [info] - must respond to the listCollections() function routed by GET /api/collections
07-Dec-2016 13:48:08 [info]   + Status=200
07-Dec-2016 13:48:08 [info]   + contentType=Some(application/json)
07-Dec-2016 13:48:08 [info]   + content[{"id":"5848677860b24d08b2e513aa","collectionname":"Collection 2 Test Suite","description":"Collection 2 Tests Description","created":"Wed Dec 07 13:48:08 CST 2016","thumbnail":"None","authorId":"000000000000000000000000"},{"id":"5848677860b24d08b2e513a9","collectionname":"Collection 1 Test Suite","description":"Collection 1 Tests Description","created":"Wed Dec 07 13:48:08 CST 2016","thumbnail":"None","authorId":"000000000000000000000000"}]
07-Dec-2016 13:48:08 2016-12-07 13:48:08,853 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:08 [info] - must respond to the listCollections() function routed by GET /api/collections/list
07-Dec-2016 13:48:08 [info]   + Status=200
07-Dec-2016 13:48:08 [info]   + contentType=Some(application/json)
07-Dec-2016 13:48:08 [info]   + content[{"id":"5848677860b24d08b2e513aa","collectionname":"Collection 2 Test Suite","description":"Collection 2 Tests Description","created":"Wed Dec 07 13:48:08 CST 2016","thumbnail":"None","authorId":"000000000000000000000000"},{"id":"5848677860b24d08b2e513a9","collectionname":"Collection 1 Test Suite","description":"Collection 1 Tests Description","created":"Wed Dec 07 13:48:08 CST 2016","thumbnail":"None","authorId":"000000000000000000000000"}]
07-Dec-2016 13:48:08 2016-12-07 13:48:08,873 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:08 [info] - must respond to the removeCollection(coll_id:UUID) function routed by POST /api/collections/:coll_id/remove 
07-Dec-2016 13:48:08 [info]   + Status_Get=200
07-Dec-2016 13:48:08 [info]   + contentType_Get=Some(application/json)
07-Dec-2016 13:48:08 [info]   + Pretty JSON format
07-Dec-2016 13:48:08 [info]   + {
07-Dec-2016 13:48:08 [info]   "status" : "success"
07-Dec-2016 13:48:08 [info] }
07-Dec-2016 13:48:08 2016-12-07 13:48:08,891 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:08 [info] - must respond to the removeCollection(coll_id:UUID) function routed by DELETE /api/collections/:id 
07-Dec-2016 13:48:08 [info]   + Status_Get=200
07-Dec-2016 13:48:08 [info]   + contentType_Get=Some(application/json)
07-Dec-2016 13:48:08 [info]   + Pretty JSON format
07-Dec-2016 13:48:08 [info]   + {
07-Dec-2016 13:48:08 [info]   "status" : "success"
07-Dec-2016 13:48:08 [info] }
07-Dec-2016 13:48:08 [info] PreviewsAPIAppSpec:
07-Dec-2016 13:48:08 [info] The Previews API Spec
07-Dec-2016 13:48:08 [info] - must provide a FakeApplication
07-Dec-2016 13:48:08 [info] - must make the FakeApplication available implicitly
07-Dec-2016 13:48:08 [info] - must start the FakeApplication
07-Dec-2016 13:48:08 [info] The Previews API Spec
07-Dec-2016 13:48:08 2016-12-07 13:48:08,913 - [DEBUG  ] - application - File1 is File:True
07-Dec-2016 13:48:08 2016-12-07 13:48:08,985 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:08 2016-12-07 13:48:08,997 - [DEBUG  ] - application - created file 5848677860b24d08b2e513e5
07-Dec-2016 13:48:08 2016-12-07 13:48:08,997 - [DEBUG  ] - application - Uploading file morrowplots.jpg
07-Dec-2016 13:48:09 [info] - must respond to the Upload File
07-Dec-2016 13:48:09 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1
07-Dec-2016 13:48:09 [info]   + Status=200
07-Dec-2016 13:48:09 [info]   + contentType=Some(application/json)
07-Dec-2016 13:48:09 [info]   + contentAsString{"id":"5848677860b24d08b2e513e5"}
07-Dec-2016 13:48:09 2016-12-07 13:48:09,006 - [DEBUG  ] - application - File1 is File:True
07-Dec-2016 13:48:09 2016-12-07 13:48:09,023 - [DEBUG  ] - application - Uploading Completed
07-Dec-2016 13:48:09 2016-12-07 13:48:09,055 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:09 2016-12-07 13:48:09,058 - [DEBUG  ] - application - ########Uploading Preview----morrowplots-preview.jpg
07-Dec-2016 13:48:09 2016-12-07 13:48:09,088 - [DEBUG  ] - application - ctp: Some(application/octet-stream)
07-Dec-2016 13:48:09 2016-12-07 13:48:09,099 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:09 [info] - must respond to the upload() and download() function routed by POST/GET /api/previews
07-Dec-2016 13:48:09 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1
07-Dec-2016 13:48:09 [info]   + Status=200
07-Dec-2016 13:48:09 [info]   + contentType=Some(application/json)
07-Dec-2016 13:48:09 [info]   + contentAsString{"id":"5848677960b24d08b2e513f0"}
07-Dec-2016 13:48:09 [info]   + Pretty JSON format
07-Dec-2016 13:48:09 [info]   + {
07-Dec-2016 13:48:09 [info]   "id" : "5848677960b24d08b2e513f0"
07-Dec-2016 13:48:09 [info] }
07-Dec-2016 13:48:09 [info]   + id value 5848677960b24d08b2e513f0
07-Dec-2016 13:48:09 [info]   + Status=200
07-Dec-2016 13:48:09 [info]   + contentType=Some(image/jpeg)
07-Dec-2016 13:48:09 2016-12-07 13:48:09,153 - [DEBUG  ] - application - File2 is File:True
07-Dec-2016 13:48:09 2016-12-07 13:48:09,163 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:09 2016-12-07 13:48:09,165 - [DEBUG  ] - application - {"Image":"fid","extractor_id":"test-extractor"}
07-Dec-2016 13:48:09 2016-12-07 13:48:09,166 - [DEBUG  ] - application - ListBuffer((Image,"fid"), (extractor_id,"test-extractor"))
07-Dec-2016 13:48:09 2016-12-07 13:48:09,172 - [DEBUG  ] - application - Updating previews.files 5848677960b24d08b2e513f0 with Map(Image -> fid, extractor_id -> test-extractor)
07-Dec-2016 13:48:09 2016-12-07 13:48:09,185 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:09 2016-12-07 13:48:09,187 - [DEBUG  ] - application - api.Files.attachPreview(): No "extractor_id" specified in request, set it to None.  request.body: {}
07-Dec-2016 13:48:09 [info]   + contentAsString2000
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07-Dec-2016 13:48:09 [info] 0
07-Dec-2016 13:48:09 [info]
07-Dec-2016 13:48:09 [info] 
07-Dec-2016 13:48:09 2016-12-07 13:48:09,193 - [DEBUG  ] - application - attachToFile: extractorId is 'Some(Other)'.
07-Dec-2016 13:48:09 2016-12-07 13:48:09,196 - [DEBUG  ] - application - Updating previews.files 5848677960b24d08b2e513f0 with Map()
07-Dec-2016 13:48:09 [info] - must respond to the uploadMetadata(id: UUID) and getMetadata(id: UUID) function routed by POST/GET /api/previews/:id/metadata
07-Dec-2016 13:48:09 [info]   + File Pathing /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/test/data/previews/data-test-general.json
07-Dec-2016 13:48:09 [info]   + Pretty JSON format
07-Dec-2016 13:48:09 [info]   + {
07-Dec-2016 13:48:09 [info]   "Image" : "fid",
07-Dec-2016 13:48:09 [info]   "extractor_id" : "test-extractor"
07-Dec-2016 13:48:09 [info] }
07-Dec-2016 13:48:09 [info]   + Status_Post=200
07-Dec-2016 13:48:09 [info]   + contentType_Post=Some(application/json)
07-Dec-2016 13:48:09 2016-12-07 13:48:09,206 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:09 2016-12-07 13:48:09,221 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:09 [info] - must respond to the attachPreview(file_id:UUID, preview:UUID) function routed by POST /api/files/:file_id/previews/:p_id 
07-Dec-2016 13:48:09 [info]   + Status_Post=200
07-Dec-2016 13:48:09 [info]   + contentType_Post=Some(application/json)
07-Dec-2016 13:48:09 [info]   + Pretty JSON format
07-Dec-2016 13:48:09 [info]   + {
07-Dec-2016 13:48:09 [info]   "status" : "success"
07-Dec-2016 13:48:09 [info] }
07-Dec-2016 13:48:09 [info] - must respond to the filePreviewsList(id: UUID) function routed by GET /api/files/:file_id/listpreviews
07-Dec-2016 13:48:09 [info]   + Status_get=200
07-Dec-2016 13:48:09 [info]   + contentType_get=Some(application/json)
07-Dec-2016 13:48:09 [info]   + Pretty JSON format
07-Dec-2016 13:48:09 [info]   + [ {
07-Dec-2016 13:48:09 [info]   "id" : "5848677960b24d08b2e513f0",
07-Dec-2016 13:48:09 [info]   "filename" : "morrowplots-preview.jpg",
07-Dec-2016 13:48:09 [info]   "contentType" : "image/jpeg"
07-Dec-2016 13:48:09 [info] } ]
07-Dec-2016 13:48:10 [info] - must respond to the getPreviews(id: UUID) function routed by GET /api/files/:file_id/getPreviews
07-Dec-2016 13:48:10 [info]   + Status_Get=200
07-Dec-2016 13:48:10 [info]   + contentType_Get=Some(application/json)
07-Dec-2016 13:48:10 [info]   + Pretty JSON format
07-Dec-2016 13:48:10 [info]   + [ {
07-Dec-2016 13:48:10 [info]   "file_id" : "5848677860b24d08b2e513e5",
07-Dec-2016 13:48:10 [info]   "previews" : [ {
07-Dec-2016 13:48:10 [info]     "pv_route" : "/api/previews/5848677960b24d08b2e513f0",
07-Dec-2016 13:48:10 [info]     "p_main" : "thumbnail-previewer.js",
07-Dec-2016 13:48:10 [info]     "pv_id" : "5848677960b24d08b2e513f0",
07-Dec-2016 13:48:10 [info]     "p_path" : "/assets/javascripts/previewers/thumbnail",
07-Dec-2016 13:48:10 [info]     "p_id" : "Thumbnail",
07-Dec-2016 13:48:10 [info]     "pv_length" : "9757",
07-Dec-2016 13:48:10 [info]     "pv_contenttype" : "image/jpeg"
07-Dec-2016 13:48:10 [info]   } ]
07-Dec-2016 13:48:10 [info] } ]
07-Dec-2016 13:48:10 2016-12-07 13:48:10,452 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:10 [info] - must respond to the list() function routed by GET /api/previews
07-Dec-2016 13:48:10 [info]   + Status=200
07-Dec-2016 13:48:10 [info]   + contentType=Some(application/json)
07-Dec-2016 13:48:10 [info]   + content[{"id":"5848677960b24d08b2e513f0","filename":"morrowplots-preview.jpg","contentType":"image/jpeg"}]
07-Dec-2016 13:48:10 2016-12-07 13:48:10,465 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:10 [info] - must respond to the removePreview(id:UUID) function routed by DELETE /api/previews/:id for morrowplots preview file
07-Dec-2016 13:48:10 [info]   + Status_Get=200
07-Dec-2016 13:48:10 [info]   + contentType_Get=Some(application/json)
07-Dec-2016 13:48:10 [info]   + Pretty JSON format
07-Dec-2016 13:48:10 [info]   + {
07-Dec-2016 13:48:10 [info]   "status" : "success"
07-Dec-2016 13:48:10 [info] }
07-Dec-2016 13:48:10 2016-12-07 13:48:10,475 - [DEBUG  ] - application - Getting value for tos.date
07-Dec-2016 13:48:10 2016-12-07 13:48:10,478 - [DEBUG  ] - application - Deleting file from indexes morrowplots.jpg
07-Dec-2016 13:48:10 2016-12-07 13:48:10,478 - [DEBUG  ] - application - Deleting file: morrowplots.jpg
07-Dec-2016 13:48:10 [info] - must respond to the removeFile(id:UUID) function routed by DELETE /api/files/:id 
07-Dec-2016 13:48:10 [info]   + Status_Get=200
07-Dec-2016 13:48:10 [info]   + contentType_Get=Some(application/json)
07-Dec-2016 13:48:10 [info]   + Pretty JSON format
07-Dec-2016 13:48:10 [info]   + {
07-Dec-2016 13:48:10 [info]   "status" : "success"
07-Dec-2016 13:48:10 [info] }
07-Dec-2016 13:48:10 [info] ApplicationSpec:
07-Dec-2016 13:48:10 [info] The Application API Spec
07-Dec-2016 13:48:10 [info] - must provide a FakeApplication
07-Dec-2016 13:48:10 [info] - must make the FakeApplication available implicitly
07-Dec-2016 13:48:10 [info] - must start the FakeApplication
07-Dec-2016 13:48:10 [info] - must send 404 on a bad request
07-Dec-2016 13:48:10 2016-12-07 13:48:10,534 - [DEBUG  ] - application - Getting value for display.name
07-Dec-2016 13:48:10 2016-12-07 13:48:10,534 - [DEBUG  ] - application - Getting value for welcome.message
07-Dec-2016 13:48:10 2016-12-07 13:48:10,557 - [DEBUG  ] - application - Getting value for theme
07-Dec-2016 13:48:10 2016-12-07 13:48:10,888 - [DEBUG  ] - application - Getting value for display.name
07-Dec-2016 13:48:10 2016-12-07 13:48:10,901 - [DEBUG  ] - application - [securesocial] bootstrap path = securesocial/bootstrap/css/bootstrap.min.css
07-Dec-2016 13:48:10 2016-12-07 13:48:10,902 - [DEBUG  ] - application - [securesocial] assets controller = controllers.ReverseAssets
07-Dec-2016 13:48:10 2016-12-07 13:48:10,903 - [DEBUG  ] - application - [securesocial] favicon path = securesocial/images/favicon.png
07-Dec-2016 13:48:10 2016-12-07 13:48:10,903 - [DEBUG  ] - application - [securesocial] Jquery path = securesocial/javascripts/jquery-1.7.1.min.js
07-Dec-2016 13:48:10 2016-12-07 13:48:10,904 - [DEBUG  ] - application - [securesocial] custom css path = None
07-Dec-2016 13:48:10 2016-12-07 13:48:10,907 - [DEBUG  ] - application - Getting value for google.analytics
07-Dec-2016 13:48:10 [info] - must render the index page
07-Dec-2016 13:48:10 2016-12-07 13:48:10,914 - [DEBUG  ] - application - Getting value for theme
07-Dec-2016 13:48:11 2016-12-07 13:48:11,192 - [DEBUG  ] - application - Getting value for display.name
07-Dec-2016 13:48:11 2016-12-07 13:48:11,193 - [DEBUG  ] - application - Getting value for google.analytics
07-Dec-2016 13:48:11 [info] - must render index template
07-Dec-2016 13:48:11 2016-12-07 13:48:11,198 - [INFO   ] - application - [securesocial] unloaded event listener SecureSocialEventListener
07-Dec-2016 13:48:11 2016-12-07 13:48:11,199 - [INFO   ] - application - [securesocial] unloaded identity provider: userpass
07-Dec-2016 13:48:11 2016-12-07 13:48:11,199 - [INFO   ] - application - Application shutdown
07-Dec-2016 13:48:11 2016-12-07 13:48:11,200 - [INFO   ] - application - [securesocial] unloaded password hasher bcrypt
07-Dec-2016 13:48:11 2016-12-07 13:48:11,204 - [INFO   ] - play - Shutdown application default Akka system.
07-Dec-2016 13:48:11 2016-12-07 13:48:11,237 - [DEBUG  ] - application - SwaggerPlugin.onStop
07-Dec-2016 13:48:11 [info] ScalaTest
07-Dec-2016 13:48:11 [info] Run completed in 14 seconds, 568 milliseconds.
07-Dec-2016 13:48:11 [info] Total number of tests run: 83
07-Dec-2016 13:48:11 [info] Suites: completed 7, aborted 0
07-Dec-2016 13:48:11 [info] Tests: succeeded 83, failed 0, canceled 0, ignored 0, pending 0
07-Dec-2016 13:48:11 [info] All tests passed.
07-Dec-2016 13:48:11 [info] Passed: Total 6, Failed 0, Errors 0, Passed 6
07-Dec-2016 13:48:11 [success] Total time: 58 s, completed Dec 7, 2016 1:48:11 PM
07-Dec-2016 13:48:11 Finished task 'test' with result: Success
07-Dec-2016 13:48:11
Substituting variable: ${bamboo.buildNumber} with 34
07-Dec-2016 13:48:11 Starting task 'doc' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.command'
07-Dec-2016 13:48:11
Beginning to execute external process for build 'Clowder - CORE - release-1.0 - default #34 (CATS-CORE665-JOB1-34)'
... running command line:
/home/bamboo/sbt-0.13.2/bin/sbt doc
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1
... using extra environment variables:
bamboo_planRepository_1_branch=release/1.0
bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm
bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_repository_revision_number=5d206f174d04b849fd247df746686572edbecaa8
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE665-JOB1-34
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_15=/bin/sh /home/bamboo/bamboo-agent-home/temp/CATS-CORE665-JOB1-34-ScriptBuildTask-8180144338487756792.sh
JAVA_OPTS=-Dbamboo.buildNumber=34
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_11=/home/bamboo/sbt-0.13.2/bin/sbt clean update
bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build
bamboo_planRepository_1_name=clowder
bamboo_repository_126124076_git_username=
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1
bamboo_buildKey=CATS-CORE665-JOB1
bamboo_capability_system_os=linux
bamboo_shortPlanName=release-1.0
bamboo_repository_126124076_git_branch=release/1.0
bamboo_planRepository_name=clowder
bamboo_buildNumber=34
bamboo_shortJobName=default
bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE665-JOB1-34
bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_repository_126124076_previous_revision_number=8a908456f4898fddb918ee96c4fc34d3a0ce4bf8
bamboo_agentId=106758145
bamboo_planName=Clowder - CORE - release-1.0
bamboo_shortPlanKey=CORE665
bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
bamboo_shortJobKey=JOB1
bamboo_planRepository_revision=5d206f174d04b849fd247df746686572edbecaa8
bamboo_repository_previous_revision_number=8a908456f4898fddb918ee96c4fc34d3a0ce4bf8
bamboo_buildTimeStamp=2016-12-07T13:42:14.803-06:00
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
bamboo_repository_126124076_branch_name=release/1.0
bamboo_planRepository_previousRevision=8a908456f4898fddb918ee96c4fc34d3a0ce4bf8
bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
bamboo_buildResultKey=CATS-CORE665-JOB1-34
bamboo_repository_git_branch=release/1.0
bamboo_repository_branch_name=release/1.0
bamboo_buildPlanName=Clowder - CORE - release-1.0 - default
bamboo_planRepository_1_revision=5d206f174d04b849fd247df746686572edbecaa8
bamboo_capability_system_builder_command_python3=/usr/bin/python3
bamboo_repository_name=clowder
bamboo_capability_system_docker_executable=/usr/bin/docker
bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt
bamboo_repository_126124076_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_planRepository_branch=release/1.0
bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir
bamboo_capability_system_git_executable=/usr/bin/git
bamboo_planRepository_1_previousRevision=8a908456f4898fddb918ee96c4fc34d3a0ce4bf8
bamboo_repository_git_username=
bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs
bamboo_planRepository_1_type=stash-rep
bamboo_planRepository_branchName=release/1.0
bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7
bamboo_capability_system_hostname=buildserver-2
bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_software_mongo=/usr/bin/mongo
bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl
bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs
bamboo_planRepository_type=stash-rep
bamboo_planRepository_1_username=
bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66
bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_7=/home/bamboo/sbt-0.13.2/bin/sbt compile
bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4
bamboo_repository_126124076_revision_number=5d206f174d04b849fd247df746686572edbecaa8
bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_8=/home/bamboo/sbt-0.13.2/bin/sbt test-only integration.APITestSuite
bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1
bamboo_planKey=CATS-CORE665
bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_planRepository_username=
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_repository_126124076_name=clowder
bamboo_planRepository_1_branchName=release/1.0
07-Dec-2016 13:48:11 Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=384M; support was removed in 8.0
07-Dec-2016 13:48:14 [info] Loading project definition from /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/project
07-Dec-2016 13:48:16 [info] Set current project to clowder (in build file:/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/)
07-Dec-2016 13:48:18 [info] Main Scala API documentation to /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/target/scala-2.10/api...
07-Dec-2016 13:49:02 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/Global.scala:57: postfix operator minutes should be enabled
07-Dec-2016 13:49:02 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:02 [warn] This can be achieved by adding the import clause 'import scala.language.postfixOps'
07-Dec-2016 13:49:02 [warn] or by setting the compiler option -language:postfixOps.
07-Dec-2016 13:49:02 [warn] See the Scala docs for value scala.language.postfixOps for a discussion
07-Dec-2016 13:49:02 [warn] why the feature should be explicitly enabled.
07-Dec-2016 13:49:02 [warn]       extractorTimer = Akka.system().scheduler.schedule(0 minutes, 5 minutes) {
07-Dec-2016 13:49:02 [warn]                                                           ^
07-Dec-2016 13:49:02 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/Global.scala:57: postfix operator minutes should be enabled
07-Dec-2016 13:49:02 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:02 [warn]       extractorTimer = Akka.system().scheduler.schedule(0 minutes, 5 minutes) {
07-Dec-2016 13:49:02 [warn]                                                                      ^
07-Dec-2016 13:49:02 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/Global.scala:63: postfix operator minutes should be enabled
07-Dec-2016 13:49:02 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:02 [warn]       jobTimer = Akka.system().scheduler.schedule(0 minutes, 1 minutes) {
07-Dec-2016 13:49:02 [warn]                                                     ^
07-Dec-2016 13:49:02 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/Global.scala:63: postfix operator minutes should be enabled
07-Dec-2016 13:49:02 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:02 [warn]       jobTimer = Akka.system().scheduler.schedule(0 minutes, 1 minutes) {
07-Dec-2016 13:49:02 [warn]                                                                ^
07-Dec-2016 13:49:02 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/api/Admin.scala:183: postfix operator seconds should be enabled
07-Dec-2016 13:49:02 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:02 [warn]     Akka.system.scheduler.scheduleOnce(1 seconds) {
07-Dec-2016 13:49:02 [warn]                                          ^
07-Dec-2016 13:49:04 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/api/Collections.scala:582: a pure expression does nothing in statement position; you may be omitting necessary parentheses
07-Dec-2016 13:49:04 [warn]           return true
07-Dec-2016 13:49:04 [warn]                  ^
07-Dec-2016 13:49:04 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/api/Collections.scala:582: enclosing method isCollectionRootOrHasNoParent has result type Unit: return value discarded
07-Dec-2016 13:49:04 [warn]           return true
07-Dec-2016 13:49:04 [warn]           ^
07-Dec-2016 13:49:04 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/api/Collections.scala:584: a pure expression does nothing in statement position; you may be omitting necessary parentheses
07-Dec-2016 13:49:04 [warn]           return false
07-Dec-2016 13:49:04 [warn]                  ^
07-Dec-2016 13:49:04 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/api/Collections.scala:584: enclosing method isCollectionRootOrHasNoParent has result type Unit: return value discarded
07-Dec-2016 13:49:04 [warn]           return false
07-Dec-2016 13:49:04 [warn]           ^
07-Dec-2016 13:49:06 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/api/CurationObjects.scala:126: postfix operator toList should be enabled
07-Dec-2016 13:49:06 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:06 [warn]             metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
07-Dec-2016 13:49:06 [warn]                                                                                                                                ^
07-Dec-2016 13:49:09 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/api/Extractions.scala:15: imported `Files' is permanently hidden by definition of class Files in package api
07-Dec-2016 13:49:09 [warn] import play.api.libs.{Files, MimeTypes}
07-Dec-2016 13:49:09 [warn]                       ^
07-Dec-2016 13:49:10 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/api/Files.scala:427: @deprecated now takes two arguments; see the scaladoc.
07-Dec-2016 13:49:10 [warn]   @deprecated
07-Dec-2016 13:49:10 [warn]    ^
07-Dec-2016 13:49:13 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/api/Geostreams.scala:43: postfix operator tupled should be enabled
07-Dec-2016 13:49:13 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:13 [warn]   ) tupled
07-Dec-2016 13:49:13 [warn]     ^
07-Dec-2016 13:49:13 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/api/Geostreams.scala:51: postfix operator tupled should be enabled
07-Dec-2016 13:49:13 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:13 [warn]   ) tupled
07-Dec-2016 13:49:13 [warn]     ^
07-Dec-2016 13:49:13 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/api/Geostreams.scala:60: postfix operator tupled should be enabled
07-Dec-2016 13:49:13 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:13 [warn]   ) tupled
07-Dec-2016 13:49:13 [warn]     ^
07-Dec-2016 13:49:13 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoDBInstitutionService.scala:3: imported `Institution' is permanently hidden by definition of object Institution in package mongodb
07-Dec-2016 13:49:13 [warn] import models.Institution
07-Dec-2016 13:49:13 [warn]               ^
07-Dec-2016 13:49:15 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoDBProjectService.scala:3: imported `Project' is permanently hidden by definition of object Project in package mongodb
07-Dec-2016 13:49:15 [warn] import models.Project
07-Dec-2016 13:49:15 [warn]               ^
07-Dec-2016 13:49:18 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/controllers/CurationObjects.scala:11: imported `Files' is permanently hidden by definition of class Files in package controllers
07-Dec-2016 13:49:18 [warn] import play.api.libs.Files
07-Dec-2016 13:49:18 [warn]                      ^
07-Dec-2016 13:49:19 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/controllers/CurationObjects.scala:428: postfix operator toList should be enabled
07-Dec-2016 13:49:19 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:19 [warn]       metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
07-Dec-2016 13:49:19 [warn]                                                                                                                          ^
07-Dec-2016 13:49:19 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/controllers/CurationObjects.scala:656: postfix operator toList should be enabled
07-Dec-2016 13:49:19 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:19 [warn]             metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
07-Dec-2016 13:49:19 [warn]                                                                                                                                ^
07-Dec-2016 13:49:21 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/controllers/Registration.scala:13: imported `Registration' is permanently hidden by definition of class Registration in package controllers
07-Dec-2016 13:49:21 [warn] import securesocial.controllers.{ProviderController, Registration, TemplatesPlugin}
07-Dec-2016 13:49:21 [warn]                                                      ^
07-Dec-2016 13:49:21 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/controllers/Registration.scala:57: reflective access of structural type member value currentHasher should be enabled
07-Dec-2016 13:49:21 [warn] by making the implicit value scala.language.reflectiveCalls visible.
07-Dec-2016 13:49:21 [warn] This can be achieved by adding the import clause 'import scala.language.reflectiveCalls'
07-Dec-2016 13:49:21 [warn] or by setting the compiler option -language:reflectiveCalls.
07-Dec-2016 13:49:21 [warn] See the Scala docs for value scala.language.reflectiveCalls for a discussion
07-Dec-2016 13:49:21 [warn] why the feature should be explicitly enabled.
07-Dec-2016 13:49:21 [warn]                 passwordInfo = Some(Registry.hashers.currentHasher.hash(info.password))
07-Dec-2016 13:49:21 [warn]                                                      ^
07-Dec-2016 13:49:21 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/controllers/Spaces.scala:265: postfix operator toMap should be enabled
07-Dec-2016 13:49:21 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:21 [warn]         val roleDescription = users.listRoles() map (t => t.name -> t.description) toMap
07-Dec-2016 13:49:21 [warn]                                                                                    ^
07-Dec-2016 13:49:23 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/models/UUID.scala:36: implicit conversion method stringToUUID should be enabled
07-Dec-2016 13:49:23 [warn] by making the implicit value scala.language.implicitConversions visible.
07-Dec-2016 13:49:23 [warn] This can be achieved by adding the import clause 'import scala.language.implicitConversions'
07-Dec-2016 13:49:23 [warn] or by setting the compiler option -language:implicitConversions.
07-Dec-2016 13:49:23 [warn] See the Scala docs for value scala.language.implicitConversions for a discussion
07-Dec-2016 13:49:23 [warn] why the feature should be explicitly enabled.
07-Dec-2016 13:49:23 [warn]   implicit def stringToUUID(s: String) = UUID(s)
07-Dec-2016 13:49:23 [warn]                ^
07-Dec-2016 13:49:23 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/models/UUID.scala:37: implicit conversion method uuidToObjectId should be enabled
07-Dec-2016 13:49:23 [warn] by making the implicit value scala.language.implicitConversions visible.
07-Dec-2016 13:49:23 [warn]   implicit def uuidToObjectId(uuid: UUID) = new ObjectId(uuid.stringify)
07-Dec-2016 13:49:23 [warn]                ^
07-Dec-2016 13:49:23 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/models/UUID.scala:38: implicit conversion method objectIdToUUID should be enabled
07-Dec-2016 13:49:23 [warn] by making the implicit value scala.language.implicitConversions visible.
07-Dec-2016 13:49:23 [warn]   implicit def objectIdToUUID(objectId: ObjectId) = UUID(objectId.toString)
07-Dec-2016 13:49:23 [warn]                ^
07-Dec-2016 13:49:23 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/models/User.scala:101: implicit conversion method userToMiniUser should be enabled
07-Dec-2016 13:49:23 [warn] by making the implicit value scala.language.implicitConversions visible.
07-Dec-2016 13:49:23 [warn]   implicit def userToMiniUser(x: User): MiniUser = x.getMiniUser
07-Dec-2016 13:49:23 [warn]                ^
07-Dec-2016 13:49:24 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/PolyglotPlugin.scala:83: postfix operator seconds should be enabled
07-Dec-2016 13:49:24 [warn] by making the implicit value scala.language.postfixOps visible.
07-Dec-2016 13:49:24 [warn]           akka.pattern.after(3 seconds, using = Akka.system.scheduler)(checkForFileAndDownload((triesLeft - 1), url, outputStream))
07-Dec-2016 13:49:24 [warn]                                ^
07-Dec-2016 13:49:26 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoContext.scala:253: implicit conversion method dbObjectToString should be enabled
07-Dec-2016 13:49:26 [warn] by making the implicit value scala.language.implicitConversions visible.
07-Dec-2016 13:49:26 [warn]   implicit def dbObjectToString(dbObject: DBObject): String = {
07-Dec-2016 13:49:26 [warn]                ^
07-Dec-2016 13:49:28 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoDBCommentService.scala:3: imported `Comment' is permanently hidden by definition of object Comment in package mongodb
07-Dec-2016 13:49:28 [warn] import models.{UUID, Comment}
07-Dec-2016 13:49:28 [warn]                      ^
07-Dec-2016 13:49:29 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoDBTagService.scala:7: imported `Tag' is permanently hidden by definition of object Tag in package mongodb
07-Dec-2016 13:49:29 [warn] import models.{Tag, UUID}
07-Dec-2016 13:49:29 [warn]                ^
07-Dec-2016 13:49:29 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoDBExtractionRequestsService.scala:20: imported `MongoSalatPlugin' is permanently hidden by definition of class MongoSalatPlugin in package mongodb
07-Dec-2016 13:49:29 [warn] import services.mongodb.MongoSalatPlugin
07-Dec-2016 13:49:29 [warn]                         ^
07-Dec-2016 13:49:29 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoDBExtractionService.scala:4: imported `Extraction' is permanently hidden by definition of object Extraction in package mongodb
07-Dec-2016 13:49:29 [warn] import models.{UUID, Extraction}
07-Dec-2016 13:49:29 [warn]                      ^
07-Dec-2016 13:49:29 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoDBExtractionService.scala:13: imported `WebPageResource' is permanently hidden by definition of object WebPageResource in package mongodb
07-Dec-2016 13:49:29 [warn] import models.WebPageResource
07-Dec-2016 13:49:29 [warn]               ^
07-Dec-2016 13:49:32 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoDBSectionService.scala:5: imported `Tag' is permanently hidden by definition of object Tag in package mongodb
07-Dec-2016 13:49:32 [warn] import models.{UUID, Tag, Comment, Section, User}
07-Dec-2016 13:49:32 [warn]                      ^
07-Dec-2016 13:49:32 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoDBSectionService.scala:5: imported `Comment' is permanently hidden by definition of object Comment in package mongodb
07-Dec-2016 13:49:32 [warn] import models.{UUID, Tag, Comment, Section, User}
07-Dec-2016 13:49:32 [warn]                           ^
07-Dec-2016 13:49:32 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoDBSpaceService.scala:19: imported `Collection' is permanently hidden by definition of object Collection in package mongodb
07-Dec-2016 13:49:32 [warn] import models.Collection
07-Dec-2016 13:49:32 [warn]               ^
07-Dec-2016 13:49:32 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/mongodb/MongoDBSpaceService.scala:20: imported `Dataset' is permanently hidden by definition of object Dataset in package mongodb
07-Dec-2016 13:49:32 [warn] import models.Dataset
07-Dec-2016 13:49:32 [warn]               ^
07-Dec-2016 13:49:54 model contains 843 documentable templates
07-Dec-2016 13:49:59 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/app/services/irods/IRODSPlugin.scala:9: Tag '@date' is not recognised
07-Dec-2016 13:49:59 [warn] /**
07-Dec-2016 13:49:59 [warn] ^
07-Dec-2016 13:50:13 [warn] 39 warnings found
07-Dec-2016 13:50:13 [info] Main Scala API documentation successful.
07-Dec-2016 13:50:13 [success] Total time: 116 s, completed Dec 7, 2016 1:50:13 PM
07-Dec-2016 13:50:13 Finished task 'doc' with result: Success
07-Dec-2016 13:50:13 Starting task 'sphinx' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.command'
07-Dec-2016 13:50:13
Beginning to execute external process for build 'Clowder - CORE - release-1.0 - default #34 (CATS-CORE665-JOB1-34)'
... running command line:
/usr/bin/sphinx-build -b html -d _build/doctrees . _build/html
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx
... using extra environment variables:
bamboo_planRepository_1_branch=release/1.0
bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm
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bamboo_repository_revision_number=5d206f174d04b849fd247df746686572edbecaa8
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE665-JOB1-34
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_15=/bin/sh /home/bamboo/bamboo-agent-home/temp/CATS-CORE665-JOB1-34-ScriptBuildTask-8180144338487756792.sh
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_11=/home/bamboo/sbt-0.13.2/bin/sbt clean update
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bamboo_repository_previous_revision_number=8a908456f4898fddb918ee96c4fc34d3a0ce4bf8
bamboo_buildTimeStamp=2016-12-07T13:42:14.803-06:00
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
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bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
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bamboo_planRepository_1_revision=5d206f174d04b849fd247df746686572edbecaa8
bamboo_capability_system_builder_command_python3=/usr/bin/python3
bamboo_repository_name=clowder
bamboo_capability_system_docker_executable=/usr/bin/docker
bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt
bamboo_repository_126124076_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_planRepository_branch=release/1.0
bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir
bamboo_capability_system_git_executable=/usr/bin/git
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bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs
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bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7
bamboo_capability_system_hostname=buildserver-2
bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_software_mongo=/usr/bin/mongo
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bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs
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bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66
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07-Dec-2016 13:50:14 Making output directory...
07-Dec-2016 13:50:14 Running Sphinx v1.2.2
07-Dec-2016 13:50:14 loading pickled environment... not yet created
07-Dec-2016 13:50:14 building [html]: targets for 12 source files that are out of date
07-Dec-2016 13:50:14 updating environment: 12 added, 0 changed, 0 removed
07-Dec-2016 13:50:14 reading sources... [  8%] api
07-Dec-2016 13:50:14 reading sources... [ 16%] architecture
07-Dec-2016 13:50:14 reading sources... [ 25%] extractors
07-Dec-2016 13:50:14 reading sources... [ 33%] index
07-Dec-2016 13:50:14 reading sources... [ 41%] installation
07-Dec-2016 13:50:14 reading sources... [ 50%] license
07-Dec-2016 13:50:14 reading sources... [ 58%] overview
07-Dec-2016 13:50:14 reading sources... [ 66%] previewers
07-Dec-2016 13:50:14 reading sources... [ 75%] setup
07-Dec-2016 13:50:14 reading sources... [ 83%] setup_dev
07-Dec-2016 13:50:14 reading sources... [ 91%] source
07-Dec-2016 13:50:14 reading sources... [100%] thankyou
07-Dec-2016 13:50:14
07-Dec-2016 13:50:14 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/license.rst:10: WARNING: Title underline too short.
07-Dec-2016 13:50:14
07-Dec-2016 13:50:14 looking for now-outdated files... none found
07-Dec-2016 13:50:14 Contributors
07-Dec-2016 13:50:14 -------
07-Dec-2016 13:50:14 pickling environment... done
07-Dec-2016 13:50:14 checking consistency... done
07-Dec-2016 13:50:14 preparing documents... done
07-Dec-2016 13:50:14 writing output... [  8%] api
07-Dec-2016 13:50:15 writing output... [ 16%] architecture
07-Dec-2016 13:50:15 writing output... [ 25%] extractors
07-Dec-2016 13:50:15 writing output... [ 33%] index
07-Dec-2016 13:50:15 writing output... [ 41%] installation
07-Dec-2016 13:50:15 writing output... [ 50%] license
07-Dec-2016 13:50:15 writing output... [ 58%] overview
07-Dec-2016 13:50:15 writing output... [ 66%] previewers
07-Dec-2016 13:50:15 writing output... [ 75%] setup
07-Dec-2016 13:50:15 writing output... [ 83%] setup_dev
07-Dec-2016 13:50:15 writing output... [ 91%] source
07-Dec-2016 13:50:15 writing output... [100%] thankyou
07-Dec-2016 13:50:15
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
07-Dec-2016 13:50:15 writing additional files... genindex search
07-Dec-2016 13:50:15 copying images... [ 20%] _static/dataset.png
07-Dec-2016 13:50:15 copying images... [ 40%] _static/data-model.jpg
07-Dec-2016 13:50:15 copying images... [ 60%] _static/extraction.jpg
07-Dec-2016 13:50:15 copying images... [ 80%] _static/architecture.jpg
07-Dec-2016 13:50:15 copying images... [100%] _static/logo_full.png
07-Dec-2016 13:50:15
07-Dec-2016 13:50:15 copying static files... done
07-Dec-2016 13:50:15 copying extra files... done
07-Dec-2016 13:50:15 dumping search index... done
07-Dec-2016 13:50:15 dumping object inventory... done
07-Dec-2016 13:50:15 build succeeded, 31 warnings.
07-Dec-2016 13:50:15 Finished task 'sphinx' with result: Success
07-Dec-2016 13:50:15
Substituting variable: ${bamboo.buildNumber} with 34
07-Dec-2016 13:50:15 Starting task 'dist' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.command'
07-Dec-2016 13:50:15
Beginning to execute external process for build 'Clowder - CORE - release-1.0 - default #34 (CATS-CORE665-JOB1-34)'
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/home/bamboo/sbt-0.13.2/bin/sbt dist
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07-Dec-2016 13:50:15 Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=384M; support was removed in 8.0
07-Dec-2016 13:50:18 [info] Loading project definition from /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/project
07-Dec-2016 13:50:20 [info] Set current project to clowder (in build file:/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/)
07-Dec-2016 13:50:20 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/target/scala-2.10/clowder_2.10-1.0.0-SNAPSHOT-sources.jar ...
07-Dec-2016 13:50:21 [info] Done packaging.
07-Dec-2016 13:50:21 [info] Wrote /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/target/scala-2.10/clowder_2.10-1.0.0-SNAPSHOT.pom
07-Dec-2016 13:50:22 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/target/scala-2.10/clowder_2.10-1.0.0-SNAPSHOT-javadoc.jar ...
07-Dec-2016 13:50:23 [info] Done packaging.
07-Dec-2016 13:50:23 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/target/scala-2.10/clowder_2.10-1.0.0-SNAPSHOT.jar ...
07-Dec-2016 13:50:27 [info] Done packaging.
07-Dec-2016 13:50:39 [info]
07-Dec-2016 13:50:39 [info] Your package is ready in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1/target/universal/clowder-1.0.0-SNAPSHOT.zip
07-Dec-2016 13:50:39 [info]
07-Dec-2016 13:50:39 [success] Total time: 19 s, completed Dec 7, 2016 1:50:39 PM
07-Dec-2016 13:50:39 Finished task 'dist' with result: Success
07-Dec-2016 13:50:39 Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
07-Dec-2016 13:50:39
Beginning to execute external process for build 'Clowder - CORE - release-1.0 - default #34 (CATS-CORE665-JOB1-34)'
... running command line:
/bin/sh docker.sh
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07-Dec-2016 13:50:42 Sending build context to Docker daemon 557.1 kB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 1.114 MB
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07-Dec-2016 13:50:42 Sending build context to Docker daemon  11.7 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 12.26 MB
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07-Dec-2016 13:50:42 Sending build context to Docker daemon  19.5 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 20.05 MB
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07-Dec-2016 13:50:42 Sending build context to Docker daemon 22.84 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon  23.4 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 23.95 MB
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07-Dec-2016 13:50:42 Sending build context to Docker daemon  27.3 MB
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07-Dec-2016 13:50:42 Sending build context to Docker daemon 30.64 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon  31.2 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 31.75 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 32.31 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 32.87 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 33.42 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 33.98 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 34.54 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 35.09 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 35.65 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 36.21 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 36.77 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 37.32 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 37.88 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 38.44 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 38.99 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 39.55 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 40.11 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 40.67 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 41.22 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 41.78 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 42.34 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 42.89 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 43.45 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 44.01 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 44.56 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 45.12 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 45.68 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 46.24 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 46.79 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 47.35 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 47.91 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 48.46 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 49.02 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 49.58 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 50.14 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 50.69 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 51.25 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 51.81 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 52.36 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 52.92 MB
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07-Dec-2016 13:50:42 Sending build context to Docker daemon 54.03 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 54.59 MB
07-Dec-2016 13:50:42 Sending build context to Docker daemon 55.15 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 55.71 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 56.26 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 56.82 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon 57.93 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon 59.05 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon  59.6 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 60.16 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 60.72 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon 62.95 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon  63.5 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon 64.62 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon  67.4 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 67.96 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 68.52 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 69.07 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon  71.3 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 71.86 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon  75.2 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 75.76 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 76.32 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 76.87 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon 78.54 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon  79.1 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 79.66 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon    83 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon  86.9 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon 89.69 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 90.24 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon  90.8 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon  94.7 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 95.26 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 95.81 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon  98.6 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon 105.8 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 106.4 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon   107 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 107.5 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 108.1 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 108.6 MB
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07-Dec-2016 13:50:43 Sending build context to Docker daemon   112 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 112.5 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 113.1 MB
07-Dec-2016 13:50:43 Sending build context to Docker daemon 113.6 MB
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07-Dec-2016 13:50:44 Sending build context to Docker daemon   117 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 117.5 MB
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07-Dec-2016 13:50:44 Sending build context to Docker daemon 118.7 MB
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07-Dec-2016 13:50:44 Sending build context to Docker daemon   122 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 122.6 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 123.1 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 123.7 MB
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07-Dec-2016 13:50:44 Sending build context to Docker daemon 124.8 MB
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07-Dec-2016 13:50:44 Sending build context to Docker daemon 125.9 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 126.5 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon   127 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 127.6 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 128.1 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 128.7 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 129.2 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 129.8 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 130.4 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 130.9 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 131.5 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon   132 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 132.6 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 133.1 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 133.7 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 134.3 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 134.8 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 135.4 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 135.9 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 136.5 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon   137 MB
07-Dec-2016 13:50:44 Sending build context to Docker daemon 137.4 MB
07-Dec-2016 13:50:44
07-Dec-2016 13:50:44 Step 1 : FROM java:8-jre
07-Dec-2016 13:50:44 8-jre: Pulling from library/java
07-Dec-2016 13:50:44 Digest: sha256:2c8f135417f12c60bd0e098022290107ac73f94837e754edc9e01c3149fa4ded
07-Dec-2016 13:50:44 Status: Image is up to date for java:8-jre
07-Dec-2016 13:50:44 ---> b13ebf1a4999
07-Dec-2016 13:50:44 Step 2 : MAINTAINER Rob Kooper <kooper@illinois.edu>
07-Dec-2016 13:50:44 ---> Using cache
07-Dec-2016 13:50:44 ---> 18b825d42143
07-Dec-2016 13:50:44 Step 3 : EXPOSE 9000
07-Dec-2016 13:50:44 ---> Using cache
07-Dec-2016 13:50:44 ---> b35ba6fc980d
07-Dec-2016 13:50:44 Step 4 : ENV CLOWDER_CONTEXT "/" CLOWDER_ADMINS "" MONGO_URI "" SMTP_HOST "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_URI "" RABBITMQ_MGMT_PORT "" ELASTICSEARCH_SERVICE_CLUSTERNAME "clowder" ELASTICSEARCH_SERVICE_SERVER "" ELASTICSEARCH_SERVICE_PORT "" TOOLMANAGER_URI ""
07-Dec-2016 13:50:44 ---> Using cache
07-Dec-2016 13:50:44 ---> d1b122e18c4a
07-Dec-2016 13:50:44 Step 5 : RUN useradd -s /bin/bash clowder
07-Dec-2016 13:50:44 ---> Using cache
07-Dec-2016 13:50:44 ---> cbd57bcfe366
07-Dec-2016 13:50:44 Step 6 : COPY files entrypoint.sh /home/clowder/
07-Dec-2016 13:50:49 ---> 28d204cb55f0
07-Dec-2016 13:50:49 Removing intermediate container 673d8e8a608c
07-Dec-2016 13:50:49 Step 7 : RUN mkdir -p /home/clowder/clowder/custom /home/clowder/clowder/logs     && chown clowder /home/clowder/clowder /home/clowder/clowder/custom /home/clowder/clowder/logs
07-Dec-2016 13:50:49 ---> Running in fcb2c98c0f98
07-Dec-2016 13:50:50 ---> 08af70d36412
07-Dec-2016 13:50:50 Removing intermediate container fcb2c98c0f98
07-Dec-2016 13:50:50 Step 8 : ENTRYPOINT /home/clowder/entrypoint.sh
07-Dec-2016 13:50:50 ---> Running in e45dce4fa5d4
07-Dec-2016 13:50:50 ---> a3ff1720778b
07-Dec-2016 13:50:50 Removing intermediate container e45dce4fa5d4
07-Dec-2016 13:50:50 Step 9 : CMD server
07-Dec-2016 13:50:50 ---> Running in 6eff2b5538bd
07-Dec-2016 13:50:50 ---> 4ce7e5ac4e4d
07-Dec-2016 13:50:50 Removing intermediate container 6eff2b5538bd
07-Dec-2016 13:50:50 Step 10 : USER clowder
07-Dec-2016 13:50:51 ---> Running in a659988c8d0d
07-Dec-2016 13:50:51 ---> 46128ce93210
07-Dec-2016 13:50:51 Removing intermediate container a659988c8d0d
07-Dec-2016 13:50:51 Successfully built 46128ce93210
07-Dec-2016 13:50:51 Sending build context to Docker daemon 22.02 kB
07-Dec-2016 13:50:51
07-Dec-2016 13:50:51 Step 1 : FROM ubuntu
07-Dec-2016 13:50:51 latest: Pulling from library/ubuntu
07-Dec-2016 13:50:51 Digest: sha256:3b64c309deae7ab0f7dbdd42b6b326261ccd6261da5d88396439353162703fb5
07-Dec-2016 13:50:51 Status: Image is up to date for ubuntu:latest
07-Dec-2016 13:50:51 ---> 4ca3a192ff2a
07-Dec-2016 13:50:51 Step 2 : RUN apt-get -y update     && apt-get -y install curl unzip docker.io python python-dev python-pip     && pip install flask-restful     && pip install arrow     && apt-get clean all     && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*     ;
07-Dec-2016 13:50:51 ---> Using cache
07-Dec-2016 13:50:51 ---> 2fee608e98fa
07-Dec-2016 13:50:51 Step 3 : COPY FILES.toolserver /
07-Dec-2016 13:50:51 ---> Using cache
07-Dec-2016 13:50:51 ---> c73e89a351f3
07-Dec-2016 13:50:51 Step 4 : ENV TOOLSERVER_PORT 8082
07-Dec-2016 13:50:51 ---> Using cache
07-Dec-2016 13:50:51 ---> ca8e3cb3fcc5
07-Dec-2016 13:50:51 Step 5 : CMD /usr/local/bin/usage
07-Dec-2016 13:50:51 ---> Using cache
07-Dec-2016 13:50:51 ---> 902e38ee6eda
07-Dec-2016 13:50:51 Successfully built 902e38ee6eda
07-Dec-2016 13:50:51 Tagged clowder toolserver with 1.0
07-Dec-2016 13:50:52 The push refers to a repository [docker.io/ncsa/clowder]
07-Dec-2016 13:50:53 6390ff62c028: Preparing
07-Dec-2016 13:50:53 3eb3dd117827: Preparing
07-Dec-2016 13:50:53 bf59770f06d5: Preparing
07-Dec-2016 13:50:53 b5b4ba1cb64d: Preparing
07-Dec-2016 13:50:53 15ba1125d6c0: Preparing
07-Dec-2016 13:50:53 bd25fcff1b2c: Preparing
07-Dec-2016 13:50:53 8d9c6e6ceb37: Preparing
07-Dec-2016 13:50:53 bc3b6402e94c: Preparing
07-Dec-2016 13:50:53 223c0d04a137: Preparing
07-Dec-2016 13:50:53 fe4c16cbf7a4: Preparing
07-Dec-2016 13:50:53 bd25fcff1b2c: Waiting
07-Dec-2016 13:50:53 8d9c6e6ceb37: Waiting
07-Dec-2016 13:50:53 bc3b6402e94c: Waiting
07-Dec-2016 13:50:53 223c0d04a137: Waiting
07-Dec-2016 13:50:53 fe4c16cbf7a4: Waiting
07-Dec-2016 13:50:53 b5b4ba1cb64d: Layer already exists
07-Dec-2016 13:50:53 bf59770f06d5: Layer already exists
07-Dec-2016 13:50:53 15ba1125d6c0: Layer already exists
07-Dec-2016 13:50:53 bd25fcff1b2c: Layer already exists
07-Dec-2016 13:50:53 bc3b6402e94c: Layer already exists
07-Dec-2016 13:50:53 8d9c6e6ceb37: Layer already exists
07-Dec-2016 13:50:53 223c0d04a137: Layer already exists
07-Dec-2016 13:50:53 fe4c16cbf7a4: Layer already exists
07-Dec-2016 13:50:57 6390ff62c028: Pushed
07-Dec-2016 13:51:16 3eb3dd117827: Pushed
07-Dec-2016 13:51:18 1.0: digest: sha256:69fc9259b9167a6e476d49e59d3257f55dae3b5aa9db05547bdf112a341231f5 size: 2414
07-Dec-2016 13:51:19 The push refers to a repository [docker.io/ncsa/toolserver]
07-Dec-2016 13:51:19 9952f7f4d767: Preparing
07-Dec-2016 13:51:19 4bca33d4c272: Preparing
07-Dec-2016 13:51:19 0d45be5b95d8: Preparing
07-Dec-2016 13:51:19 18568efa7ad4: Preparing
07-Dec-2016 13:51:19 1c53295311c1: Preparing
07-Dec-2016 13:51:19 dfcc17ddae9e: Preparing
07-Dec-2016 13:51:19 d29d52f94ad5: Preparing
07-Dec-2016 13:51:19 d29d52f94ad5: Waiting
07-Dec-2016 13:51:19 dfcc17ddae9e: Waiting
07-Dec-2016 13:51:19 18568efa7ad4: Layer already exists
07-Dec-2016 13:51:19 1c53295311c1: Layer already exists
07-Dec-2016 13:51:19 0d45be5b95d8: Layer already exists
07-Dec-2016 13:51:19 9952f7f4d767: Layer already exists
07-Dec-2016 13:51:19 4bca33d4c272: Layer already exists
07-Dec-2016 13:51:19 dfcc17ddae9e: Layer already exists
07-Dec-2016 13:51:19 d29d52f94ad5: Layer already exists
07-Dec-2016 13:51:20 1.0: digest: sha256:181d7b04e61592a62f1a80c1ce4fd08298aec022bb2f97b1989090a498854c40 size: 1778
07-Dec-2016 13:51:20 Pushed clowder and toolserver to dockerhub ncsa
07-Dec-2016 13:51:20 Tagged clowder toolserver with 1.0
07-Dec-2016 13:51:21 The push refers to a repository [docker.io/clowder/clowder]
07-Dec-2016 13:51:21 6390ff62c028: Preparing
07-Dec-2016 13:51:21 3eb3dd117827: Preparing
07-Dec-2016 13:51:21 bf59770f06d5: Preparing
07-Dec-2016 13:51:21 b5b4ba1cb64d: Preparing
07-Dec-2016 13:51:21 15ba1125d6c0: Preparing
07-Dec-2016 13:51:21 bd25fcff1b2c: Preparing
07-Dec-2016 13:51:21 8d9c6e6ceb37: Preparing
07-Dec-2016 13:51:21 bc3b6402e94c: Preparing
07-Dec-2016 13:51:21 223c0d04a137: Preparing
07-Dec-2016 13:51:21 fe4c16cbf7a4: Preparing
07-Dec-2016 13:51:21 bd25fcff1b2c: Waiting
07-Dec-2016 13:51:21 8d9c6e6ceb37: Waiting
07-Dec-2016 13:51:21 bc3b6402e94c: Waiting
07-Dec-2016 13:51:21 223c0d04a137: Waiting
07-Dec-2016 13:51:21 fe4c16cbf7a4: Waiting
07-Dec-2016 13:51:22 bf59770f06d5: Layer already exists
07-Dec-2016 13:51:22 b5b4ba1cb64d: Layer already exists
07-Dec-2016 13:51:22 15ba1125d6c0: Layer already exists
07-Dec-2016 13:51:22 bd25fcff1b2c: Layer already exists
07-Dec-2016 13:51:22 6390ff62c028: Mounted from ncsa/clowder
07-Dec-2016 13:51:22 8d9c6e6ceb37: Layer already exists
07-Dec-2016 13:51:22 bc3b6402e94c: Layer already exists
07-Dec-2016 13:51:22 3eb3dd117827: Mounted from ncsa/clowder
07-Dec-2016 13:51:22 223c0d04a137: Layer already exists
07-Dec-2016 13:51:22 fe4c16cbf7a4: Layer already exists
07-Dec-2016 13:51:23 1.0: digest: sha256:69fc9259b9167a6e476d49e59d3257f55dae3b5aa9db05547bdf112a341231f5 size: 2414
07-Dec-2016 13:51:24 The push refers to a repository [docker.io/clowder/toolserver]
07-Dec-2016 13:51:25 9952f7f4d767: Preparing
07-Dec-2016 13:51:25 4bca33d4c272: Preparing
07-Dec-2016 13:51:25 0d45be5b95d8: Preparing
07-Dec-2016 13:51:25 18568efa7ad4: Preparing
07-Dec-2016 13:51:25 1c53295311c1: Preparing
07-Dec-2016 13:51:25 dfcc17ddae9e: Preparing
07-Dec-2016 13:51:25 d29d52f94ad5: Preparing
07-Dec-2016 13:51:25 d29d52f94ad5: Waiting
07-Dec-2016 13:51:25 4bca33d4c272: Layer already exists
07-Dec-2016 13:51:25 18568efa7ad4: Layer already exists
07-Dec-2016 13:51:25 1c53295311c1: Layer already exists
07-Dec-2016 13:51:25 0d45be5b95d8: Layer already exists
07-Dec-2016 13:51:25 9952f7f4d767: Layer already exists
07-Dec-2016 13:51:25 dfcc17ddae9e: Layer already exists
07-Dec-2016 13:51:25 d29d52f94ad5: Layer already exists
07-Dec-2016 13:51:26 1.0: digest: sha256:181d7b04e61592a62f1a80c1ce4fd08298aec022bb2f97b1989090a498854c40 size: 1778
07-Dec-2016 13:51:26 Pushed clowder and toolserver to dockerhub clowder
07-Dec-2016 13:51:26 Untagged: toolserver-10109:latest
07-Dec-2016 13:51:26 Untagged: clowder-10109:latest
07-Dec-2016 13:51:26 Finished task 'docker build' with result: Success
07-Dec-2016 13:51:26 Starting task 'junit' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit'
07-Dec-2016 13:51:26 Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE665-JOB1...
07-Dec-2016 13:51:26 Finished task 'junit' with result: Success
07-Dec-2016 13:51:26 Running post build plugin 'Docker Container Cleanup'
07-Dec-2016 13:51:26 Running post build plugin 'NCover Results Collector'
07-Dec-2016 13:51:26 Running post build plugin 'Clover Results Collector'
07-Dec-2016 13:51:26 Running post build plugin 'npm Cache Cleanup'
07-Dec-2016 13:51:26 Running post build plugin 'Artifact Copier'
07-Dec-2016 13:51:26 Publishing an artifact: dist
07-Dec-2016 13:51:35 Finished publishing of artifact Shared artifact: [dist], pattern: [clowder-*.zip] anchored at: [target/universal] in 8.466 s
07-Dec-2016 13:51:35 Publishing an artifact: scaladoc
07-Dec-2016 13:51:37 Finished publishing of artifact Shared artifact: [scaladoc], pattern: [**/*] anchored at: [target/scala-2.10/api] in 2.090 s
07-Dec-2016 13:51:37 Publishing an artifact: manual
07-Dec-2016 13:51:37 Finished publishing of artifact Shared artifact: [manual], pattern: [**/*] anchored at: [doc/src/sphinx/_build/html] in 386.4 ms
07-Dec-2016 13:51:37 Finalising the build...
07-Dec-2016 13:51:37 Stopping timer.
07-Dec-2016 13:51:37 Build CATS-CORE665-JOB1-34 completed.
07-Dec-2016 13:51:37 Running on server: post build plugin 'NCover Results Collector'
07-Dec-2016 13:51:37 Running on server: post build plugin 'Build Hanging Detection Configuration'
07-Dec-2016 13:51:37 Running on server: post build plugin 'Clover Delta Calculator'
07-Dec-2016 13:51:37 Running on server: post build plugin 'Maven Dependencies Postprocessor'
07-Dec-2016 13:51:37 All post build plugins have finished
07-Dec-2016 13:51:37 Generating build results summary...
07-Dec-2016 13:51:37 Saving build results to disk...
07-Dec-2016 13:51:37 Logging substituted variables...
07-Dec-2016 13:51:37 Indexing build results...
07-Dec-2016 13:51:37 Finished building CATS-CORE665-JOB1-34.