Build: #3 was successful

Job: default was successful

Stages & jobs

  1. Default Stage

Build log

The build generated 2,634 lines of output.The output is too long and has been truncated to the last 1,000 lines. Download or view full build log.

03-Oct-2016 14:25:32 2016-10-03 14:25:32,664 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:32 2016-10-03 14:25:32,665 - [DEBUG  ] - application - Creating new collection
03-Oct-2016 14:25:32 [info] - must respond to the createCollection() function routed by POST /api/collections for Collection 1
03-Oct-2016 14:25:32 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
03-Oct-2016 14:25:32 [info]   + File Pathing /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/test/data/collections/data-test-collection.json
03-Oct-2016 14:25:32 [info]   + Pretty JSON format
03-Oct-2016 14:25:32 [info]   + {
03-Oct-2016 14:25:32 [info]   "description" : "Collection 1 Tests Description",
03-Oct-2016 14:25:32 [info]   "name" : "Collection 1 Test Suite",
03-Oct-2016 14:25:32 [info]   "space" : "default"
03-Oct-2016 14:25:32 [info] }
03-Oct-2016 14:25:32 [info]   + Status=200
03-Oct-2016 14:25:32 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:32 [info]   + content{"id":"57f2b0ac60b221889891e86b"}
03-Oct-2016 14:25:32 2016-10-03 14:25:32,701 - [DEBUG  ] - application - File1 is File:True
03-Oct-2016 14:25:32 2016-10-03 14:25:32,706 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:32 2016-10-03 14:25:32,707 - [DEBUG  ] - application - Creating new collection
03-Oct-2016 14:25:32 [info] - must respond to the createCollection() function routed by POST /api/collections for Collection 2
03-Oct-2016 14:25:32 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
03-Oct-2016 14:25:32 [info]   + File Pathing /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/test/data/collections/data-test-collection-1.json
03-Oct-2016 14:25:32 [info]   + Pretty JSON format
03-Oct-2016 14:25:32 [info]   + {
03-Oct-2016 14:25:32 [info]   "description" : "Collection 2 Tests Description",
03-Oct-2016 14:25:32 [info]   "name" : "Collection 2 Test Suite",
03-Oct-2016 14:25:32 [info]   "space" : "default"
03-Oct-2016 14:25:32 [info] }
03-Oct-2016 14:25:32 [info]   + Status=200
03-Oct-2016 14:25:32 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:32 [info]   + content{"id":"57f2b0ac60b221889891e86c"}
03-Oct-2016 14:25:32 2016-10-03 14:25:32,714 - [DEBUG  ] - application - File1 is File:True
03-Oct-2016 14:25:32 2016-10-03 14:25:32,888 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:32 2016-10-03 14:25:32,897 - [INFO   ] - application - created file 57f2b0ac60b221889891e86e
03-Oct-2016 14:25:32 2016-10-03 14:25:32,897 - [DEBUG  ] - application - Uploading file dataset-image.zip
03-Oct-2016 14:25:32 2016-10-03 14:25:32,903 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:32 2016-10-03 14:25:32,907 - [DEBUG  ] - application - --- API Creating new dataset ----
03-Oct-2016 14:25:32 2016-10-03 14:25:32,939 - [DEBUG  ] - application - ----- Adding file to dataset completed
03-Oct-2016 14:25:32 [info] - must respond to the createDataset() function routed by POST /api/datasets for Dataset 1 Creation
03-Oct-2016 14:25:32 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
03-Oct-2016 14:25:32 [info]   + Status=200
03-Oct-2016 14:25:32 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:32 [info]   + contentAsString{"id":"57f2b0ac60b221889891e878"}
03-Oct-2016 14:25:32 2016-10-03 14:25:32,948 - [DEBUG  ] - application - File1 is File:True
03-Oct-2016 14:25:32 2016-10-03 14:25:32,991 - [INFO   ] - application - Uploading Completed
03-Oct-2016 14:25:33 2016-10-03 14:25:33,181 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,190 - [INFO   ] - application - created file 57f2b0ad60b221889891e886
03-Oct-2016 14:25:33 2016-10-03 14:25:33,191 - [DEBUG  ] - application - Uploading file dataset-image-1.zip
03-Oct-2016 14:25:33 2016-10-03 14:25:33,202 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,280 - [DEBUG  ] - application - --- API Creating new dataset ----
03-Oct-2016 14:25:33 2016-10-03 14:25:33,293 - [DEBUG  ] - application - ----- Adding file to dataset completed
03-Oct-2016 14:25:33 2016-10-03 14:25:33,298 - [INFO   ] - application - Uploading Completed
03-Oct-2016 14:25:33 [info] - must respond to the createDataset() function routed by POST /api/datasets for Dataset 2 Creation
03-Oct-2016 14:25:33 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
03-Oct-2016 14:25:33 [info]   + Status=200
03-Oct-2016 14:25:33 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:33 [info]   + contentAsString{"id":"57f2b0ad60b221889891e899"}
03-Oct-2016 14:25:33 2016-10-03 14:25:33,309 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,311 - [DEBUG  ] - application - Adding dataset 57f2b0ac60b221889891e878 to collection 57f2b0ac60b221889891e86b
03-Oct-2016 14:25:33 2016-10-03 14:25:33,443 - [DEBUG  ] - application - retmd: { }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,445 - [DEBUG  ] - application - retmd: { }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,445 - [DEBUG  ] - application - retmd: [ ]
03-Oct-2016 14:25:33 2016-10-03 14:25:33,458 - [DEBUG  ] - application - Adding dataset to collection completed
03-Oct-2016 14:25:33 [info] - must respond to the attachDataset(coll_id:UUID, ds_id:UUID) function routed by POST /api/collections/:coll_id/datasets/:ds_id for dataset 1
03-Oct-2016 14:25:33 [info]   + Status=200
03-Oct-2016 14:25:33 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:33 [info]   + contentAsString{"datasetsInCollection":1}
03-Oct-2016 14:25:33 2016-10-03 14:25:33,472 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 [info] - must respond to the listInCollection(coll_id: UUID) function routed by GET /api/collections/:coll_id/getDatasets
03-Oct-2016 14:25:33 [info]   + Status_Get=200
03-Oct-2016 14:25:33 [info]   + contentType_Get=Some(application/json)
03-Oct-2016 14:25:33 [info]   + Pretty JSON format
03-Oct-2016 14:25:33 [info]   + [ {
03-Oct-2016 14:25:33 [info]   "id" : "57f2b0ac60b221889891e878",
03-Oct-2016 14:25:33 [info]   "name" : "Dataset 1 API Test Creation",
03-Oct-2016 14:25:33 [info]   "description" : "Part 1 of Dataset API Test Suite",
03-Oct-2016 14:25:33 [info]   "created" : "Mon Oct 03 14:25:32 CDT 2016",
03-Oct-2016 14:25:33 [info]   "thumbnail" : "None",
03-Oct-2016 14:25:33 [info]   "authorId" : "000000000000000000000000",
03-Oct-2016 14:25:33 [info]   "spaces" : [ ]
03-Oct-2016 14:25:33 [info] } ]
03-Oct-2016 14:25:33 2016-10-03 14:25:33,485 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 [info] - must respond to the listOutsideCollection(coll_id: UUID) function routed by GET /api/datasets/listOutsideCollection/:coll_id
03-Oct-2016 14:25:33 [info]   + Status_Get=200
03-Oct-2016 14:25:33 [info]   + contentType_Get=Some(application/json)
03-Oct-2016 14:25:33 [info]   + Pretty JSON format
03-Oct-2016 14:25:33 [info]   + [ {
03-Oct-2016 14:25:33 [info]   "id" : "57f2b0ad60b221889891e899",
03-Oct-2016 14:25:33 [info]   "name" : "Dataset 2 API Test Creation",
03-Oct-2016 14:25:33 [info]   "description" : "Part 2 of Dataset API Test Suite",
03-Oct-2016 14:25:33 [info]   "created" : "Mon Oct 03 14:25:33 CDT 2016",
03-Oct-2016 14:25:33 [info]   "thumbnail" : "None",
03-Oct-2016 14:25:33 [info]   "authorId" : "000000000000000000000000",
03-Oct-2016 14:25:33 [info]   "spaces" : [ ]
03-Oct-2016 14:25:33 [info] }, {
03-Oct-2016 14:25:33 [info]   "id" : "57f2b0ac60b221889891e878",
03-Oct-2016 14:25:33 [info]   "name" : "Dataset 1 API Test Creation",
03-Oct-2016 14:25:33 [info]   "description" : "Part 1 of Dataset API Test Suite",
03-Oct-2016 14:25:33 [info]   "created" : "Mon Oct 03 14:25:32 CDT 2016",
03-Oct-2016 14:25:33 [info]   "thumbnail" : "None",
03-Oct-2016 14:25:33 [info]   "authorId" : "000000000000000000000000",
03-Oct-2016 14:25:33 [info]   "spaces" : [ ]
03-Oct-2016 14:25:33 [info] } ]
03-Oct-2016 14:25:33 2016-10-03 14:25:33,503 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,504 - [DEBUG  ] - application - Adding dataset 57f2b0ad60b221889891e899 to collection 57f2b0ac60b221889891e86b
03-Oct-2016 14:25:33 2016-10-03 14:25:33,508 - [DEBUG  ] - application - retmd: { }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,508 - [DEBUG  ] - application - retmd: { }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,509 - [DEBUG  ] - application - retmd: [ ]
03-Oct-2016 14:25:33 2016-10-03 14:25:33,514 - [DEBUG  ] - application - Adding dataset to collection completed
03-Oct-2016 14:25:33 [info] - must respond to the attachDataset(coll_id:UUID, ds_id:UUID) function routed by POST /api/collections/:coll_id/datasets/:ds_id for dataset 2
03-Oct-2016 14:25:33 [info]   + Status=200
03-Oct-2016 14:25:33 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:33 [info]   + contentAsString{"datasetsInCollection":2}
03-Oct-2016 14:25:33 2016-10-03 14:25:33,525 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,528 - [DEBUG  ] - application - Removing dataset 57f2b0ad60b221889891e899 from collection 57f2b0ac60b221889891e86b
03-Oct-2016 14:25:33 2016-10-03 14:25:33,533 - [DEBUG  ] - application - retmd: { }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,534 - [DEBUG  ] - application - retmd: { }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,535 - [DEBUG  ] - application - retmd: [ ]
03-Oct-2016 14:25:33 2016-10-03 14:25:33,541 - [INFO   ] - application - Removing dataset from collection completed
03-Oct-2016 14:25:33 [info] - must respond to the removeDataset(coll_id:UUID, ds_id:UUID, ignoreNotFound) function routed by DELETE /api/collections/:coll_id/datasets/:ds_id for dataset 2
03-Oct-2016 14:25:33 [info]   + Status=200
03-Oct-2016 14:25:33 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:33 [info]   + contentAsString{"status":"success"}
03-Oct-2016 14:25:33 2016-10-03 14:25:33,550 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,551 - [DEBUG  ] - application - Removing dataset 57f2b0ac60b221889891e878 from collection 57f2b0ac60b221889891e86b
03-Oct-2016 14:25:33 2016-10-03 14:25:33,556 - [DEBUG  ] - application - retmd: { }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,556 - [DEBUG  ] - application - retmd: { }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,557 - [DEBUG  ] - application - retmd: [ ]
03-Oct-2016 14:25:33 2016-10-03 14:25:33,561 - [INFO   ] - application - Removing dataset from collection completed
03-Oct-2016 14:25:33 [info] - must respond to the removeDataset(coll_id:UUID, ds_id:UUID, ignoreNoteFound) function routed by POST /api/collections/:coll_id/datasets/:ds_id/:ignoreNotFound for dataset 2
03-Oct-2016 14:25:33 [info]   + Status=200
03-Oct-2016 14:25:33 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:33 [info]   + contentAsString{"status":"success"}
03-Oct-2016 14:25:33 2016-10-03 14:25:33,568 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,570 - [DEBUG  ] - application - userdfSPARQLStore not enabled
03-Oct-2016 14:25:33 2016-10-03 14:25:33,576 - [DEBUG  ] - application - Removing XML metadata belonging to file 57f2b0ac60b221889891e86e from dataset 57f2b0ac60b221889891e878.
03-Oct-2016 14:25:33 2016-10-03 14:25:33,583 - [ERROR  ] - application - File not found: 57f2b0ac60b221889891e86e
03-Oct-2016 14:25:33 [info] - must respond to the deleteDataset(id:UUID) function routed by DELETE /api/datasets/:id for Dataset 1
03-Oct-2016 14:25:33 [info]   + Status_Get=200
03-Oct-2016 14:25:33 [info]   + contentType_Get=Some(application/json)
03-Oct-2016 14:25:33 [info]   + Pretty JSON format
03-Oct-2016 14:25:33 [info]   + {
03-Oct-2016 14:25:33 [info]   "status" : "success"
03-Oct-2016 14:25:33 [info] }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,589 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,590 - [DEBUG  ] - application - userdfSPARQLStore not enabled
03-Oct-2016 14:25:33 2016-10-03 14:25:33,596 - [DEBUG  ] - application - Removing XML metadata belonging to file 57f2b0ad60b221889891e886 from dataset 57f2b0ad60b221889891e899.
03-Oct-2016 14:25:33 2016-10-03 14:25:33,647 - [ERROR  ] - application - File not found: 57f2b0ad60b221889891e886
03-Oct-2016 14:25:33 [info] - must respond to the deleteDataset(id:UUID) function routed by DELETE /api/datasets/:id for Dataset 2
03-Oct-2016 14:25:33 [info]   + Status_Get=200
03-Oct-2016 14:25:33 [info]   + contentType_Get=Some(application/json)
03-Oct-2016 14:25:33 [info]   + Pretty JSON format
03-Oct-2016 14:25:33 [info]   + {
03-Oct-2016 14:25:33 [info]   "status" : "success"
03-Oct-2016 14:25:33 [info] }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,658 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 [info] - must respond to the listCollections() function routed by GET /api/collections
03-Oct-2016 14:25:33 [info]   + Status=200
03-Oct-2016 14:25:33 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:33 [info]   + content[{"id":"57f2b0ac60b221889891e86c","collectionname":"Collection 2 Test Suite","description":"Collection 2 Tests Description","created":"Mon Oct 03 14:25:32 CDT 2016","thumbnail":"None","authorId":"000000000000000000000000"},{"id":"57f2b0ac60b221889891e86b","collectionname":"Collection 1 Test Suite","description":"Collection 1 Tests Description","created":"Mon Oct 03 14:25:32 CDT 2016","thumbnail":"None","authorId":"000000000000000000000000"}]
03-Oct-2016 14:25:33 2016-10-03 14:25:33,673 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 [info] - must respond to the listCollections() function routed by GET /api/collections/list
03-Oct-2016 14:25:33 [info]   + Status=200
03-Oct-2016 14:25:33 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:33 [info]   + content[{"id":"57f2b0ac60b221889891e86c","collectionname":"Collection 2 Test Suite","description":"Collection 2 Tests Description","created":"Mon Oct 03 14:25:32 CDT 2016","thumbnail":"None","authorId":"000000000000000000000000"},{"id":"57f2b0ac60b221889891e86b","collectionname":"Collection 1 Test Suite","description":"Collection 1 Tests Description","created":"Mon Oct 03 14:25:32 CDT 2016","thumbnail":"None","authorId":"000000000000000000000000"}]
03-Oct-2016 14:25:33 2016-10-03 14:25:33,684 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 [info] - must respond to the removeCollection(coll_id:UUID) function routed by POST /api/collections/:coll_id/remove 
03-Oct-2016 14:25:33 [info]   + Status_Get=200
03-Oct-2016 14:25:33 [info]   + contentType_Get=Some(application/json)
03-Oct-2016 14:25:33 [info]   + Pretty JSON format
03-Oct-2016 14:25:33 [info]   + {
03-Oct-2016 14:25:33 [info]   "status" : "success"
03-Oct-2016 14:25:33 [info] }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,701 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 [info] - must respond to the removeCollection(coll_id:UUID) function routed by DELETE /api/collections/:id 
03-Oct-2016 14:25:33 [info]   + Status_Get=200
03-Oct-2016 14:25:33 [info]   + contentType_Get=Some(application/json)
03-Oct-2016 14:25:33 [info]   + Pretty JSON format
03-Oct-2016 14:25:33 [info]   + {
03-Oct-2016 14:25:33 [info]   "status" : "success"
03-Oct-2016 14:25:33 [info] }
03-Oct-2016 14:25:33 [info] PreviewsAPIAppSpec:
03-Oct-2016 14:25:33 [info] The Previews API Spec
03-Oct-2016 14:25:33 [info] - must provide a FakeApplication
03-Oct-2016 14:25:33 [info] - must make the FakeApplication available implicitly
03-Oct-2016 14:25:33 [info] - must start the FakeApplication
03-Oct-2016 14:25:33 [info] The Previews API Spec
03-Oct-2016 14:25:33 2016-10-03 14:25:33,724 - [DEBUG  ] - application - File1 is File:True
03-Oct-2016 14:25:33 2016-10-03 14:25:33,790 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,797 - [INFO   ] - application - created file 57f2b0ad60b221889891e8a7
03-Oct-2016 14:25:33 2016-10-03 14:25:33,797 - [DEBUG  ] - application - Uploading file morrowplots.jpg
03-Oct-2016 14:25:33 [info] - must respond to the Upload File
03-Oct-2016 14:25:33 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
03-Oct-2016 14:25:33 [info]   + Status=200
03-Oct-2016 14:25:33 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:33 [info]   + contentAsString{"id":"57f2b0ad60b221889891e8a7"}
03-Oct-2016 14:25:33 2016-10-03 14:25:33,808 - [DEBUG  ] - application - File1 is File:True
03-Oct-2016 14:25:33 2016-10-03 14:25:33,818 - [INFO   ] - application - Uploading Completed
03-Oct-2016 14:25:33 2016-10-03 14:25:33,840 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,842 - [DEBUG  ] - application - ########Uploading Preview----morrowplots-preview.jpg
03-Oct-2016 14:25:33 2016-10-03 14:25:33,874 - [DEBUG  ] - application - ctp: Some(application/octet-stream)
03-Oct-2016 14:25:33 2016-10-03 14:25:33,882 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 [info] - must respond to the upload() and download() function routed by POST/GET /api/previews
03-Oct-2016 14:25:33 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
03-Oct-2016 14:25:33 [info]   + Status=200
03-Oct-2016 14:25:33 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:33 [info]   + contentAsString{"id":"57f2b0ad60b221889891e8b2"}
03-Oct-2016 14:25:33 [info]   + Pretty JSON format
03-Oct-2016 14:25:33 [info]   + {
03-Oct-2016 14:25:33 [info]   "id" : "57f2b0ad60b221889891e8b2"
03-Oct-2016 14:25:33 [info] }
03-Oct-2016 14:25:33 [info]   + id value 57f2b0ad60b221889891e8b2
03-Oct-2016 14:25:33 [info]   + Status=200
03-Oct-2016 14:25:33 [info]   + contentType=Some(image/jpeg)
03-Oct-2016 14:25:33 [info]   + contentAsString2000
03-Oct-2016 14:25:33 [info] ������������JFIFHH���������ExifMM*n
03-Oct-2016 14:25:33 [info] v���������%LLgoogleNexus OneHH        ���0220������������0100������������
03-Oct-2016 14:25:33 [info]  ���*2010:03:05 08:51:142010:03:05 08:51:14R980100 N���W���&(ydX
03-Oct-2016 14:25:33  ���d���3WGS-84ASCIIHYBRID-FIX2010:03:05���H������������C                
03-Oct-2016 14:25:33 [info] 
03-Oct-2016 14:25:33  $.' ",#(7),01444'9=82<.342������C                         
03-Oct-2016 14:25:33
03-Oct-2016 14:25:33 2!!22222222222222222222222222222222222222222222222222������uY!������        
03-Oct-2016 14:25:33 [info] ���������}!1AQa"q2���������#B������R������$3br���        
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03-Oct-2016 14:25:33 ~���/���r���o���e���1���0������AZ������������
03-Oct-2016 14:25:33 [info] 61d
03-Oct-2016 14:25:33 [info] m���W���6hdTg������A���I!���q���������������s���������m�����6l���������y6���f������H?u������s������a������x������H���
03-Oct-2016 14:25:33 [info] ���AU������d������s�����E%fu*������'������������'������7������������������g���������������=Fs���eg4���H������,�������l�����9�����E$�����������������������������������K7������������������,���Q������������+�����������������F���'pRc]���~l���        ������������oq���6H�������Ll���~�����<���������n���������T�����������������2������Y���#���[xZV������xFfi���������Gf���������':���x���m6���.c������.C0���m���>������������n-j4���#���Z������j���f���>i���Tq������FG9'9������}���������T������_}���
03-Oct-2016 14:25:33 ���eH���[���q������H���������#���c���������i������Xb���1��������+���P���G c���������%������7������������ !9 ygoL7|������sP���������q
03-Oct-2016 14:25:33 [info] Cms������k�����,*���������c���:ct���_��������������V���d������d5���u;������I���J��������������Z���������Uj���[O ������������\���XHN������2������=���wV���������������������������+?i���t&49���������������������������<_~!{���������e������ ���_\7.]������B���nVb���c���������������E��� ���e���������������H-���nUCgqt���y������A���`���������#���(������h������Uy������y���������Gs�����.IX������������J��������������������wo���<o���"���������$|s���m������$r���{������������"���07���e$���~���}������"tMV���~3��2���������
03-Oct-2016 14:25:33 [info] u�����������1$���3��������[kmp������]������O9���p=������V������������&�����������������~������qU���j
03-Oct-2016 14:25:33 [���������j���N������_���y,_���L��� ���������|M���-Q���b];��@�����T`<���G������RT���g���������N/���6���V���������k���u`���E���������������&�����������������Qu8V������ rz��������^������x���%���o-������0������q���������������������_{���3O���O������#������������f|+���NX���������������B5���F���%������������F���K���i&X������l���z���I������\|���4x���W������t���-�����������y1��� ln������+���������XIw������o���7`���������T~'���Y������n������\���=���A9��������d���V���@���I���&r�����������������Ii���������h"r������ ���pFX���������������J~������������������I$���������q���x������Q���u ���:.8���0q���1]���x���5E���q������������������<���M��������weX���<zg9�����������+���1uw��������������������������fS������������Z���������+\���2001���������������O������^���������w_���r���&��� [��        ���0_��������������        ������������������������������1K�����������'���������<N���\������������]��������:~���k`4��������(���z������+���H���Cp���4���������
03-Oct-2016 14:25:33 [info] ���$Fn���h��}������c������������������S{\���������/���~$xz/���cY����������������)�����z��������������_p:zQEg.������cJ;���[) 1T1������s���0j#[���v���m���a1R������t���<s���:c���z(�����������������^{������������>G�����������Ok}�����������������'���������(������K)��������������e������r������#���>���[���b������������������������W,���OC9h������
03-Oct-2016 14:25:33 [info] 0
03-Oct-2016 14:25:33 [info]
03-Oct-2016 14:25:33 [info] 
03-Oct-2016 14:25:33 2016-10-03 14:25:33,951 - [DEBUG  ] - application - File2 is File:True
03-Oct-2016 14:25:33 2016-10-03 14:25:33,961 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,965 - [DEBUG  ] - application - {"Image":"fid","extractor_id":"test-extractor"}
03-Oct-2016 14:25:33 2016-10-03 14:25:33,965 - [DEBUG  ] - application - ListBuffer((Image,"fid"), (extractor_id,"test-extractor"))
03-Oct-2016 14:25:33 2016-10-03 14:25:33,970 - [DEBUG  ] - application - Updating previews.files 57f2b0ad60b221889891e8b2 with Map(Image -> fid, extractor_id -> test-extractor)
03-Oct-2016 14:25:33 [info] - must respond to the uploadMetadata(id: UUID) and getMetadata(id: UUID) function routed by POST/GET /api/previews/:id/metadata
03-Oct-2016 14:25:33 [info]   + File Pathing /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/test/data/previews/data-test-general.json
03-Oct-2016 14:25:33 [info]   + Pretty JSON format
03-Oct-2016 14:25:33 [info]   + {
03-Oct-2016 14:25:33 [info]   "Image" : "fid",
03-Oct-2016 14:25:33 [info]   "extractor_id" : "test-extractor"
03-Oct-2016 14:25:33 [info] }
03-Oct-2016 14:25:33 [info]   + Status_Post=200
03-Oct-2016 14:25:33 [info]   + contentType_Post=Some(application/json)
03-Oct-2016 14:25:33 2016-10-03 14:25:33,980 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:33 2016-10-03 14:25:33,986 - [DEBUG  ] - application - api.Files.attachPreview(): No "extractor_id" specified in request, set it to None.  request.body: {}
03-Oct-2016 14:25:33 2016-10-03 14:25:33,988 - [DEBUG  ] - application - attachToFile: extractorId is 'Some(Other)'.
03-Oct-2016 14:25:33 2016-10-03 14:25:33,990 - [DEBUG  ] - application - Updating previews.files 57f2b0ad60b221889891e8b2 with Map()
03-Oct-2016 14:25:33 [info] - must respond to the attachPreview(file_id:UUID, preview:UUID) function routed by POST /api/files/:file_id/previews/:p_id 
03-Oct-2016 14:25:33 [info]   + Status_Post=200
03-Oct-2016 14:25:33 [info]   + contentType_Post=Some(application/json)
03-Oct-2016 14:25:33 [info]   + Pretty JSON format
03-Oct-2016 14:25:33 [info]   + {
03-Oct-2016 14:25:33 [info]   "status" : "success"
03-Oct-2016 14:25:33 [info] }
03-Oct-2016 14:25:33 2016-10-03 14:25:33,998 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:34 [info] - must respond to the filePreviewsList(id: UUID) function routed by GET /api/files/:file_id/listpreviews
03-Oct-2016 14:25:34 [info]   + Status_get=200
03-Oct-2016 14:25:34 [info]   + contentType_get=Some(application/json)
03-Oct-2016 14:25:34 [info]   + Pretty JSON format
03-Oct-2016 14:25:34 [info]   + [ {
03-Oct-2016 14:25:34 [info]   "id" : "57f2b0ad60b221889891e8b2",
03-Oct-2016 14:25:34 [info]   "filename" : "morrowplots-preview.jpg",
03-Oct-2016 14:25:34 [info]   "contentType" : "image/jpeg"
03-Oct-2016 14:25:34 [info] } ]
03-Oct-2016 14:25:34 2016-10-03 14:25:34,015 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:34 [info] - must respond to the getPreviews(id: UUID) function routed by GET /api/files/:file_id/getPreviews
03-Oct-2016 14:25:34 [info]   + Status_Get=200
03-Oct-2016 14:25:34 [info]   + contentType_Get=Some(application/json)
03-Oct-2016 14:25:34 [info]   + Pretty JSON format
03-Oct-2016 14:25:34 [info]   + [ {
03-Oct-2016 14:25:34 [info]   "file_id" : "57f2b0ad60b221889891e8a7",
03-Oct-2016 14:25:34 [info]   "previews" : [ {
03-Oct-2016 14:25:34 [info]     "pv_route" : "/api/previews/57f2b0ad60b221889891e8b2",
03-Oct-2016 14:25:34 [info]     "p_main" : "thumbnail-previewer.js",
03-Oct-2016 14:25:34 [info]     "pv_id" : "57f2b0ad60b221889891e8b2",
03-Oct-2016 14:25:34 [info]     "p_path" : "/assets/javascripts/previewers/thumbnail",
03-Oct-2016 14:25:34 [info]     "p_id" : "Thumbnail",
03-Oct-2016 14:25:34 [info]     "pv_length" : "9757",
03-Oct-2016 14:25:34 [info]     "pv_contenttype" : "image/jpeg"
03-Oct-2016 14:25:34 [info]   } ]
03-Oct-2016 14:25:34 [info] } ]
03-Oct-2016 14:25:34 2016-10-03 14:25:34,756 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:34 [info] - must respond to the list() function routed by GET /api/previews
03-Oct-2016 14:25:34 [info]   + Status=200
03-Oct-2016 14:25:34 [info]   + contentType=Some(application/json)
03-Oct-2016 14:25:34 [info]   + content[{"id":"57f2b0ad60b221889891e8b2","filename":"morrowplots-preview.jpg","contentType":"image/jpeg"}]
03-Oct-2016 14:25:34 2016-10-03 14:25:34,766 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:34 [info] - must respond to the removePreview(id:UUID) function routed by DELETE /api/previews/:id for morrowplots preview file
03-Oct-2016 14:25:34 [info]   + Status_Get=200
03-Oct-2016 14:25:34 [info]   + contentType_Get=Some(application/json)
03-Oct-2016 14:25:34 [info]   + Pretty JSON format
03-Oct-2016 14:25:34 [info]   + {
03-Oct-2016 14:25:34 [info]   "status" : "success"
03-Oct-2016 14:25:34 [info] }
03-Oct-2016 14:25:34 2016-10-03 14:25:34,774 - [DEBUG  ] - application - Getting value for tos.date
03-Oct-2016 14:25:34 2016-10-03 14:25:34,787 - [DEBUG  ] - application - Deleting file from indexes morrowplots.jpg
03-Oct-2016 14:25:34 2016-10-03 14:25:34,788 - [DEBUG  ] - application - Deleting file: morrowplots.jpg
03-Oct-2016 14:25:34 [info] - must respond to the removeFile(id:UUID) function routed by DELETE /api/files/:id 
03-Oct-2016 14:25:34 [info]   + Status_Get=200
03-Oct-2016 14:25:34 [info]   + contentType_Get=Some(application/json)
03-Oct-2016 14:25:34 [info]   + Pretty JSON format
03-Oct-2016 14:25:34 [info]   + {
03-Oct-2016 14:25:34 [info]   "status" : "success"
03-Oct-2016 14:25:34 [info] }
03-Oct-2016 14:25:34 [info] ApplicationSpec:
03-Oct-2016 14:25:34 [info] The Application API Spec
03-Oct-2016 14:25:34 [info] - must provide a FakeApplication
03-Oct-2016 14:25:34 [info] - must make the FakeApplication available implicitly
03-Oct-2016 14:25:34 [info] - must start the FakeApplication
03-Oct-2016 14:25:34 [info] - must send 404 on a bad request
03-Oct-2016 14:25:34 2016-10-03 14:25:34,860 - [DEBUG  ] - application - Getting value for display.name
03-Oct-2016 14:25:34 2016-10-03 14:25:34,861 - [DEBUG  ] - application - Getting value for welcome.message
03-Oct-2016 14:25:34 2016-10-03 14:25:34,883 - [DEBUG  ] - application - Getting value for theme
03-Oct-2016 14:25:35 2016-10-03 14:25:35,311 - [DEBUG  ] - application - Getting value for display.name
03-Oct-2016 14:25:35 2016-10-03 14:25:35,322 - [DEBUG  ] - application - [securesocial] bootstrap path = securesocial/bootstrap/css/bootstrap.min.css
03-Oct-2016 14:25:35 2016-10-03 14:25:35,323 - [DEBUG  ] - application - [securesocial] assets controller = controllers.ReverseAssets
03-Oct-2016 14:25:35 2016-10-03 14:25:35,324 - [DEBUG  ] - application - [securesocial] favicon path = securesocial/images/favicon.png
03-Oct-2016 14:25:35 2016-10-03 14:25:35,324 - [DEBUG  ] - application - [securesocial] Jquery path = securesocial/javascripts/jquery-1.7.1.min.js
03-Oct-2016 14:25:35 2016-10-03 14:25:35,325 - [DEBUG  ] - application - [securesocial] custom css path = None
03-Oct-2016 14:25:35 2016-10-03 14:25:35,329 - [DEBUG  ] - application - Getting value for google.analytics
03-Oct-2016 14:25:35 2016-10-03 14:25:35,336 - [DEBUG  ] - application - Getting value for theme
03-Oct-2016 14:25:35 [info] - must render the index page
03-Oct-2016 14:25:35 2016-10-03 14:25:35,743 - [DEBUG  ] - application - Getting value for display.name
03-Oct-2016 14:25:35 2016-10-03 14:25:35,745 - [DEBUG  ] - application - Getting value for google.analytics
03-Oct-2016 14:25:35 [info] - must render index template
03-Oct-2016 14:25:35 2016-10-03 14:25:35,750 - [INFO   ] - application - [securesocial] unloaded event listener SecureSocialEventListener
03-Oct-2016 14:25:35 2016-10-03 14:25:35,751 - [INFO   ] - application - [securesocial] unloaded identity provider: userpass
03-Oct-2016 14:25:35 2016-10-03 14:25:35,752 - [INFO   ] - application - Application shutdown
03-Oct-2016 14:25:35 2016-10-03 14:25:35,752 - [INFO   ] - application - [securesocial] unloaded password hasher bcrypt
03-Oct-2016 14:25:35 2016-10-03 14:25:35,763 - [INFO   ] - play - Shutdown application default Akka system.
03-Oct-2016 14:25:35 2016-10-03 14:25:35,832 - [DEBUG  ] - application - SwaggerPlugin.onStop
03-Oct-2016 14:25:35 [info] ScalaTest
03-Oct-2016 14:25:35 [info] Run completed in 14 seconds, 240 milliseconds.
03-Oct-2016 14:25:35 [info] Total number of tests run: 83
03-Oct-2016 14:25:35 [info] Suites: completed 7, aborted 0
03-Oct-2016 14:25:35 [info] Tests: succeeded 83, failed 0, canceled 0, ignored 0, pending 0
03-Oct-2016 14:25:35 [info] All tests passed.
03-Oct-2016 14:25:35 [info] Passed: Total 6, Failed 0, Errors 0, Passed 6
03-Oct-2016 14:25:36 [success] Total time: 55 s, completed Oct 3, 2016 2:25:36 PM
03-Oct-2016 14:25:36 Finished task 'test' with result: Success
03-Oct-2016 14:25:36
Substituting variable: ${bamboo.buildNumber} with 3
03-Oct-2016 14:25:36 Starting task 'doc' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.command'
03-Oct-2016 14:25:36
Beginning to execute external process for build 'Clowder - CORE - bugfix-CATS-669-extractor-timestamps-off-on-sead2-dev - default #3 (CATS-CORE676-JOB1-3)'
... running command line:
/home/bamboo/sbt-0.13.2/bin/sbt doc
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
... using extra environment variables:
bamboo_planRepository_1_branch=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_repository_127172620_branch_name=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_repository_revision_number=9f7ad73e802292c4231ee5de83aa0e0034fc8daa
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE676-JOB1-3
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_15=/bin/sh /home/bamboo/bamboo-agent-home/temp/CATS-CORE676-JOB1-3-ScriptBuildTask-5754842831694172733.sh
JAVA_OPTS=-Dbamboo.buildNumber=3
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_11=/home/bamboo/sbt-0.13.2/bin/sbt clean update
bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build
bamboo_planRepository_1_name=clowder
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
bamboo_buildKey=CATS-CORE676-JOB1
bamboo_capability_system_os=linux
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bamboo_shortJobName=default
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bamboo_repository_127172620_git_username=
bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_agentId=106758145
bamboo_planName=Clowder - CORE - bugfix-CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_shortPlanKey=CORE676
bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
bamboo_shortJobKey=JOB1
bamboo_planRepository_revision=9f7ad73e802292c4231ee5de83aa0e0034fc8daa
bamboo_repository_previous_revision_number=409822eb1457406de650aa97646de329789c4035
bamboo_repository_127172620_previous_revision_number=409822eb1457406de650aa97646de329789c4035
bamboo_buildTimeStamp=2016-10-03T14:19:54.431-05:00
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
bamboo_planRepository_previousRevision=409822eb1457406de650aa97646de329789c4035
bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
bamboo_buildResultKey=CATS-CORE676-JOB1-3
bamboo_repository_git_branch=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
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bamboo_repository_127172620_git_branch=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
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bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt
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bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir
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bamboo_repository_127172620_name=clowder
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bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66
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bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_planRepository_username=
bamboo_repository_127172620_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66
bamboo_repository_127172620_revision_number=9f7ad73e802292c4231ee5de83aa0e0034fc8daa
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_planRepository_1_branchName=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
03-Oct-2016 14:25:36 Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=384M; support was removed in 8.0
03-Oct-2016 14:25:39 [info] Loading project definition from /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/project
03-Oct-2016 14:25:41 [info] Set current project to clowder (in build file:/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/)
03-Oct-2016 14:25:43 [info] Main Scala API documentation to /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/target/scala-2.10/api...
03-Oct-2016 14:26:21 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/Global.scala:56: postfix operator minutes should be enabled
03-Oct-2016 14:26:21 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:21 [warn] This can be achieved by adding the import clause 'import scala.language.postfixOps'
03-Oct-2016 14:26:21 [warn] or by setting the compiler option -language:postfixOps.
03-Oct-2016 14:26:21 [warn] See the Scala docs for value scala.language.postfixOps for a discussion
03-Oct-2016 14:26:21 [warn] why the feature should be explicitly enabled.
03-Oct-2016 14:26:21 [warn]       extractorTimer = Akka.system().scheduler.schedule(0 minutes, 5 minutes) {
03-Oct-2016 14:26:21 [warn]                                                           ^
03-Oct-2016 14:26:21 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/Global.scala:56: postfix operator minutes should be enabled
03-Oct-2016 14:26:21 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:21 [warn]       extractorTimer = Akka.system().scheduler.schedule(0 minutes, 5 minutes) {
03-Oct-2016 14:26:21 [warn]                                                                      ^
03-Oct-2016 14:26:21 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/Global.scala:62: postfix operator minutes should be enabled
03-Oct-2016 14:26:21 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:21 [warn]       jobTimer = Akka.system().scheduler.schedule(0 minutes, 1 minutes) {
03-Oct-2016 14:26:21 [warn]                                                     ^
03-Oct-2016 14:26:21 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/Global.scala:62: postfix operator minutes should be enabled
03-Oct-2016 14:26:21 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:21 [warn]       jobTimer = Akka.system().scheduler.schedule(0 minutes, 1 minutes) {
03-Oct-2016 14:26:21 [warn]                                                                ^
03-Oct-2016 14:26:22 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/api/Admin.scala:183: postfix operator seconds should be enabled
03-Oct-2016 14:26:22 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:22 [warn]     Akka.system.scheduler.scheduleOnce(1 seconds) {
03-Oct-2016 14:26:22 [warn]                                          ^
03-Oct-2016 14:26:23 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/api/Collections.scala:580: a pure expression does nothing in statement position; you may be omitting necessary parentheses
03-Oct-2016 14:26:23 [warn]           return true
03-Oct-2016 14:26:23 [warn]                  ^
03-Oct-2016 14:26:23 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/api/Collections.scala:580: enclosing method isCollectionRootOrHasNoParent has result type Unit: return value discarded
03-Oct-2016 14:26:23 [warn]           return true
03-Oct-2016 14:26:23 [warn]           ^
03-Oct-2016 14:26:23 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/api/Collections.scala:582: a pure expression does nothing in statement position; you may be omitting necessary parentheses
03-Oct-2016 14:26:23 [warn]           return false
03-Oct-2016 14:26:23 [warn]                  ^
03-Oct-2016 14:26:23 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/api/Collections.scala:582: enclosing method isCollectionRootOrHasNoParent has result type Unit: return value discarded
03-Oct-2016 14:26:23 [warn]           return false
03-Oct-2016 14:26:23 [warn]           ^
03-Oct-2016 14:26:25 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/api/CurationObjects.scala:126: postfix operator toList should be enabled
03-Oct-2016 14:26:25 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:25 [warn]             metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
03-Oct-2016 14:26:25 [warn]                                                                                                                                ^
03-Oct-2016 14:26:27 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/api/Extractions.scala:15: imported `Files' is permanently hidden by definition of class Files in package api
03-Oct-2016 14:26:27 [warn] import play.api.libs.{Files, MimeTypes}
03-Oct-2016 14:26:27 [warn]                       ^
03-Oct-2016 14:26:28 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/api/Files.scala:427: @deprecated now takes two arguments; see the scaladoc.
03-Oct-2016 14:26:28 [warn]   @deprecated
03-Oct-2016 14:26:28 [warn]    ^
03-Oct-2016 14:26:33 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/api/Geostreams.scala:43: postfix operator tupled should be enabled
03-Oct-2016 14:26:33 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:33 [warn]   ) tupled
03-Oct-2016 14:26:33 [warn]     ^
03-Oct-2016 14:26:33 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/api/Geostreams.scala:51: postfix operator tupled should be enabled
03-Oct-2016 14:26:33 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:33 [warn]   ) tupled
03-Oct-2016 14:26:33 [warn]     ^
03-Oct-2016 14:26:33 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/api/Geostreams.scala:60: postfix operator tupled should be enabled
03-Oct-2016 14:26:33 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:33 [warn]   ) tupled
03-Oct-2016 14:26:33 [warn]     ^
03-Oct-2016 14:26:34 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoDBInstitutionService.scala:3: imported `Institution' is permanently hidden by definition of object Institution in package mongodb
03-Oct-2016 14:26:34 [warn] import models.Institution
03-Oct-2016 14:26:34 [warn]               ^
03-Oct-2016 14:26:35 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoDBProjectService.scala:3: imported `Project' is permanently hidden by definition of object Project in package mongodb
03-Oct-2016 14:26:35 [warn] import models.Project
03-Oct-2016 14:26:35 [warn]               ^
03-Oct-2016 14:26:39 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/controllers/CurationObjects.scala:11: imported `Files' is permanently hidden by definition of class Files in package controllers
03-Oct-2016 14:26:39 [warn] import play.api.libs.Files
03-Oct-2016 14:26:39 [warn]                      ^
03-Oct-2016 14:26:41 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/controllers/CurationObjects.scala:428: postfix operator toList should be enabled
03-Oct-2016 14:26:41 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:41 [warn]       metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
03-Oct-2016 14:26:41 [warn]                                                                                                                          ^
03-Oct-2016 14:26:41 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/controllers/CurationObjects.scala:657: postfix operator toList should be enabled
03-Oct-2016 14:26:41 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:41 [warn]             metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
03-Oct-2016 14:26:41 [warn]                                                                                                                                ^
03-Oct-2016 14:26:43 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/controllers/Registration.scala:13: imported `Registration' is permanently hidden by definition of class Registration in package controllers
03-Oct-2016 14:26:43 [warn] import securesocial.controllers.{ProviderController, Registration, TemplatesPlugin}
03-Oct-2016 14:26:43 [warn]                                                      ^
03-Oct-2016 14:26:43 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/controllers/Registration.scala:57: reflective access of structural type member value currentHasher should be enabled
03-Oct-2016 14:26:43 [warn] by making the implicit value scala.language.reflectiveCalls visible.
03-Oct-2016 14:26:43 [warn] This can be achieved by adding the import clause 'import scala.language.reflectiveCalls'
03-Oct-2016 14:26:43 [warn] or by setting the compiler option -language:reflectiveCalls.
03-Oct-2016 14:26:43 [warn] See the Scala docs for value scala.language.reflectiveCalls for a discussion
03-Oct-2016 14:26:43 [warn] why the feature should be explicitly enabled.
03-Oct-2016 14:26:43 [warn]                 passwordInfo = Some(Registry.hashers.currentHasher.hash(info.password))
03-Oct-2016 14:26:43 [warn]                                                      ^
03-Oct-2016 14:26:44 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/controllers/Spaces.scala:265: postfix operator toMap should be enabled
03-Oct-2016 14:26:44 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:44 [warn]         val roleDescription = users.listRoles() map (t => t.name -> t.description) toMap
03-Oct-2016 14:26:44 [warn]                                                                                    ^
03-Oct-2016 14:26:46 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/models/UUID.scala:36: implicit conversion method stringToUUID should be enabled
03-Oct-2016 14:26:46 [warn] by making the implicit value scala.language.implicitConversions visible.
03-Oct-2016 14:26:46 [warn] This can be achieved by adding the import clause 'import scala.language.implicitConversions'
03-Oct-2016 14:26:46 [warn] or by setting the compiler option -language:implicitConversions.
03-Oct-2016 14:26:46 [warn] See the Scala docs for value scala.language.implicitConversions for a discussion
03-Oct-2016 14:26:46 [warn] why the feature should be explicitly enabled.
03-Oct-2016 14:26:46 [warn]   implicit def stringToUUID(s: String) = UUID(s)
03-Oct-2016 14:26:46 [warn]                ^
03-Oct-2016 14:26:46 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/models/UUID.scala:37: implicit conversion method uuidToObjectId should be enabled
03-Oct-2016 14:26:46 [warn] by making the implicit value scala.language.implicitConversions visible.
03-Oct-2016 14:26:46 [warn]   implicit def uuidToObjectId(uuid: UUID) = new ObjectId(uuid.stringify)
03-Oct-2016 14:26:46 [warn]                ^
03-Oct-2016 14:26:46 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/models/UUID.scala:38: implicit conversion method objectIdToUUID should be enabled
03-Oct-2016 14:26:46 [warn] by making the implicit value scala.language.implicitConversions visible.
03-Oct-2016 14:26:46 [warn]   implicit def objectIdToUUID(objectId: ObjectId) = UUID(objectId.toString)
03-Oct-2016 14:26:46 [warn]                ^
03-Oct-2016 14:26:46 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/models/User.scala:100: implicit conversion method userToMiniUser should be enabled
03-Oct-2016 14:26:46 [warn] by making the implicit value scala.language.implicitConversions visible.
03-Oct-2016 14:26:46 [warn]   implicit def userToMiniUser(x: User): MiniUser = x.getMiniUser
03-Oct-2016 14:26:46 [warn]                ^
03-Oct-2016 14:26:47 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/PolyglotPlugin.scala:83: postfix operator seconds should be enabled
03-Oct-2016 14:26:47 [warn] by making the implicit value scala.language.postfixOps visible.
03-Oct-2016 14:26:47 [warn]           akka.pattern.after(3 seconds, using = Akka.system.scheduler)(checkForFileAndDownload((triesLeft - 1), url, outputStream))
03-Oct-2016 14:26:47 [warn]                                ^
03-Oct-2016 14:26:51 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoContext.scala:253: implicit conversion method dbObjectToString should be enabled
03-Oct-2016 14:26:51 [warn] by making the implicit value scala.language.implicitConversions visible.
03-Oct-2016 14:26:51 [warn]   implicit def dbObjectToString(dbObject: DBObject): String = {
03-Oct-2016 14:26:51 [warn]                ^
03-Oct-2016 14:26:52 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoDBCommentService.scala:3: imported `Comment' is permanently hidden by definition of object Comment in package mongodb
03-Oct-2016 14:26:52 [warn] import models.{UUID, Comment}
03-Oct-2016 14:26:52 [warn]                      ^
03-Oct-2016 14:26:53 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoDBTagService.scala:7: imported `Tag' is permanently hidden by definition of object Tag in package mongodb
03-Oct-2016 14:26:53 [warn] import models.{Tag, UUID}
03-Oct-2016 14:26:53 [warn]                ^
03-Oct-2016 14:26:53 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoDBExtractionRequestsService.scala:20: imported `MongoSalatPlugin' is permanently hidden by definition of class MongoSalatPlugin in package mongodb
03-Oct-2016 14:26:53 [warn] import services.mongodb.MongoSalatPlugin
03-Oct-2016 14:26:53 [warn]                         ^
03-Oct-2016 14:26:53 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoDBExtractionService.scala:4: imported `Extraction' is permanently hidden by definition of object Extraction in package mongodb
03-Oct-2016 14:26:53 [warn] import models.{UUID, Extraction}
03-Oct-2016 14:26:53 [warn]                      ^
03-Oct-2016 14:26:53 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoDBExtractionService.scala:13: imported `WebPageResource' is permanently hidden by definition of object WebPageResource in package mongodb
03-Oct-2016 14:26:53 [warn] import models.WebPageResource
03-Oct-2016 14:26:53 [warn]               ^
03-Oct-2016 14:26:56 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoDBSectionService.scala:5: imported `Tag' is permanently hidden by definition of object Tag in package mongodb
03-Oct-2016 14:26:56 [warn] import models.{UUID, Tag, Comment, Section, User}
03-Oct-2016 14:26:56 [warn]                      ^
03-Oct-2016 14:26:56 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoDBSectionService.scala:5: imported `Comment' is permanently hidden by definition of object Comment in package mongodb
03-Oct-2016 14:26:56 [warn] import models.{UUID, Tag, Comment, Section, User}
03-Oct-2016 14:26:56 [warn]                           ^
03-Oct-2016 14:26:56 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoDBSpaceService.scala:19: imported `Collection' is permanently hidden by definition of object Collection in package mongodb
03-Oct-2016 14:26:56 [warn] import models.Collection
03-Oct-2016 14:26:56 [warn]               ^
03-Oct-2016 14:26:56 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/mongodb/MongoDBSpaceService.scala:20: imported `Dataset' is permanently hidden by definition of object Dataset in package mongodb
03-Oct-2016 14:26:56 [warn] import models.Dataset
03-Oct-2016 14:26:56 [warn]               ^
03-Oct-2016 14:27:16 model contains 843 documentable templates
03-Oct-2016 14:27:22 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/app/services/irods/IRODSPlugin.scala:9: Tag '@date' is not recognised
03-Oct-2016 14:27:22 [warn] /**
03-Oct-2016 14:27:22 [warn] ^
03-Oct-2016 14:27:35 [warn] 39 warnings found
03-Oct-2016 14:27:35 [info] Main Scala API documentation successful.
03-Oct-2016 14:27:35 [success] Total time: 113 s, completed Oct 3, 2016 2:27:35 PM
03-Oct-2016 14:27:35 Finished task 'doc' with result: Success
03-Oct-2016 14:27:35 Starting task 'sphinx' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.command'
03-Oct-2016 14:27:35
Beginning to execute external process for build 'Clowder - CORE - bugfix-CATS-669-extractor-timestamps-off-on-sead2-dev - default #3 (CATS-CORE676-JOB1-3)'
... running command line:
/usr/bin/sphinx-build -b html -d _build/doctrees . _build/html
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx
... using extra environment variables:
bamboo_planRepository_1_branch=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_repository_127172620_branch_name=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_repository_revision_number=9f7ad73e802292c4231ee5de83aa0e0034fc8daa
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE676-JOB1-3
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_15=/bin/sh /home/bamboo/bamboo-agent-home/temp/CATS-CORE676-JOB1-3-ScriptBuildTask-5754842831694172733.sh
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_11=/home/bamboo/sbt-0.13.2/bin/sbt clean update
bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build
bamboo_planRepository_1_name=clowder
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
bamboo_buildKey=CATS-CORE676-JOB1
bamboo_capability_system_os=linux
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bamboo_planRepository_name=clowder
bamboo_buildNumber=3
bamboo_shortJobName=default
bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE676-JOB1-3
bamboo_repository_127172620_git_username=
bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_agentId=106758145
bamboo_planName=Clowder - CORE - bugfix-CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_shortPlanKey=CORE676
bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
bamboo_shortJobKey=JOB1
bamboo_planRepository_revision=9f7ad73e802292c4231ee5de83aa0e0034fc8daa
bamboo_repository_previous_revision_number=409822eb1457406de650aa97646de329789c4035
bamboo_repository_127172620_previous_revision_number=409822eb1457406de650aa97646de329789c4035
bamboo_buildTimeStamp=2016-10-03T14:19:54.431-05:00
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
bamboo_planRepository_previousRevision=409822eb1457406de650aa97646de329789c4035
bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
bamboo_buildResultKey=CATS-CORE676-JOB1-3
bamboo_repository_git_branch=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
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03-Oct-2016 14:27:36 Making output directory...
03-Oct-2016 14:27:36 Running Sphinx v1.2.2
03-Oct-2016 14:27:36 loading pickled environment... not yet created
03-Oct-2016 14:27:36 building [html]: targets for 12 source files that are out of date
03-Oct-2016 14:27:36 updating environment: 12 added, 0 changed, 0 removed
03-Oct-2016 14:27:36 reading sources... [  8%] api
03-Oct-2016 14:27:37 reading sources... [ 16%] architecture
03-Oct-2016 14:27:37 reading sources... [ 25%] extractors
03-Oct-2016 14:27:37 reading sources... [ 33%] index
03-Oct-2016 14:27:37 reading sources... [ 41%] installation
03-Oct-2016 14:27:37 reading sources... [ 50%] license
03-Oct-2016 14:27:37 reading sources... [ 58%] overview
03-Oct-2016 14:27:37 reading sources... [ 66%] previewers
03-Oct-2016 14:27:37 reading sources... [ 75%] setup
03-Oct-2016 14:27:37 reading sources... [ 83%] setup_dev
03-Oct-2016 14:27:37 reading sources... [ 91%] source
03-Oct-2016 14:27:37 reading sources... [100%] thankyou
03-Oct-2016 14:27:37
03-Oct-2016 14:27:37 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/license.rst:10: WARNING: Title underline too short.
03-Oct-2016 14:27:37
03-Oct-2016 14:27:37 Contributors
03-Oct-2016 14:27:37 -------
03-Oct-2016 14:27:37 looking for now-outdated files... none found
03-Oct-2016 14:27:37 pickling environment... done
03-Oct-2016 14:27:37 checking consistency... done
03-Oct-2016 14:27:37 preparing documents... done
03-Oct-2016 14:27:37 writing output... [  8%] api
03-Oct-2016 14:27:37 writing output... [ 16%] architecture
03-Oct-2016 14:27:37 writing output... [ 25%] extractors
03-Oct-2016 14:27:37 writing output... [ 33%] index
03-Oct-2016 14:27:37 writing output... [ 41%] installation
03-Oct-2016 14:27:37 writing output... [ 50%] license
03-Oct-2016 14:27:37 writing output... [ 58%] overview
03-Oct-2016 14:27:38 writing output... [ 66%] previewers
03-Oct-2016 14:27:38 writing output... [ 75%] setup
03-Oct-2016 14:27:38 writing output... [ 83%] setup_dev
03-Oct-2016 14:27:38 writing output... [ 91%] source
03-Oct-2016 14:27:38 writing output... [100%] thankyou
03-Oct-2016 14:27:38
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
03-Oct-2016 14:27:38 writing additional files... genindex search
03-Oct-2016 14:27:38 copying images... [ 20%] _static/dataset.png
03-Oct-2016 14:27:38 copying images... [ 40%] _static/data-model.jpg
03-Oct-2016 14:27:38 copying images... [ 60%] _static/extraction.jpg
03-Oct-2016 14:27:38 copying images... [ 80%] _static/architecture.jpg
03-Oct-2016 14:27:38 copying images... [100%] _static/logo_full.png
03-Oct-2016 14:27:38
03-Oct-2016 14:27:38 copying static files... done
03-Oct-2016 14:27:38 copying extra files... done
03-Oct-2016 14:27:38 dumping search index... done
03-Oct-2016 14:27:38 dumping object inventory... done
03-Oct-2016 14:27:38 build succeeded, 31 warnings.
03-Oct-2016 14:27:38 Finished task 'sphinx' with result: Success
03-Oct-2016 14:27:38
Substituting variable: ${bamboo.buildNumber} with 3
03-Oct-2016 14:27:38 Starting task 'dist' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.command'
03-Oct-2016 14:27:38
Beginning to execute external process for build 'Clowder - CORE - bugfix-CATS-669-extractor-timestamps-off-on-sead2-dev - default #3 (CATS-CORE676-JOB1-3)'
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03-Oct-2016 14:27:38 Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=384M; support was removed in 8.0
03-Oct-2016 14:27:41 [info] Loading project definition from /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/project
03-Oct-2016 14:27:43 [info] Set current project to clowder (in build file:/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/)
03-Oct-2016 14:27:44 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/target/scala-2.10/clowder_2.10-0.9.x-SNAPSHOT-sources.jar ...
03-Oct-2016 14:27:44 [info] Done packaging.
03-Oct-2016 14:27:44 [info] Wrote /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/target/scala-2.10/clowder_2.10-0.9.x-SNAPSHOT.pom
03-Oct-2016 14:27:45 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/target/scala-2.10/clowder_2.10-0.9.x-SNAPSHOT-javadoc.jar ...
03-Oct-2016 14:27:46 [info] Done packaging.
03-Oct-2016 14:27:46 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/target/scala-2.10/clowder_2.10-0.9.x-SNAPSHOT.jar ...
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03-Oct-2016 14:28:04 [info]
03-Oct-2016 14:28:04 [info] Your package is ready in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1/target/universal/clowder-0.9.x-SNAPSHOT.zip
03-Oct-2016 14:28:04 [info]
03-Oct-2016 14:28:04 [success] Total time: 21 s, completed Oct 3, 2016 2:28:04 PM
03-Oct-2016 14:28:04 Finished task 'dist' with result: Success
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03-Oct-2016 14:28:04
Beginning to execute external process for build 'Clowder - CORE - bugfix-CATS-669-extractor-timestamps-off-on-sead2-dev - default #3 (CATS-CORE676-JOB1-3)'
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/bin/sh docker.sh
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
... using extra environment variables:
bamboo_planRepository_1_branch=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_repository_127172620_branch_name=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_repository_revision_number=9f7ad73e802292c4231ee5de83aa0e0034fc8daa
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE676-JOB1-3
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_10=/home/bamboo/sbt-0.13.2/bin/sbt dist
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_15=/bin/sh /home/bamboo/bamboo-agent-home/temp/CATS-CORE676-JOB1-3-ScriptBuildTask-5754842831694172733.sh
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_12=/usr/bin/sphinx-build -b html -d _build/doctrees . _build/html
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_11=/home/bamboo/sbt-0.13.2/bin/sbt clean update
bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build
bamboo_planRepository_1_name=clowder
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
bamboo_buildKey=CATS-CORE676-JOB1
bamboo_capability_system_os=linux
bamboo_shortPlanName=bugfix-CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_planRepository_name=clowder
bamboo_buildNumber=3
bamboo_shortJobName=default
bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE676-JOB1-3
bamboo_repository_127172620_git_username=
bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_agentId=106758145
bamboo_planName=Clowder - CORE - bugfix-CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_shortPlanKey=CORE676
bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
bamboo_shortJobKey=JOB1
bamboo_planRepository_revision=9f7ad73e802292c4231ee5de83aa0e0034fc8daa
bamboo_repository_previous_revision_number=409822eb1457406de650aa97646de329789c4035
bamboo_repository_127172620_previous_revision_number=409822eb1457406de650aa97646de329789c4035
bamboo_buildTimeStamp=2016-10-03T14:19:54.431-05:00
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
bamboo_planRepository_previousRevision=409822eb1457406de650aa97646de329789c4035
bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
bamboo_buildResultKey=CATS-CORE676-JOB1-3
bamboo_repository_git_branch=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_repository_branch_name=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_buildPlanName=Clowder - CORE - bugfix-CATS-669-extractor-timestamps-off-on-sead2-dev - default
bamboo_planRepository_1_revision=9f7ad73e802292c4231ee5de83aa0e0034fc8daa
bamboo_repository_name=clowder
bamboo_repository_127172620_git_branch=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_capability_system_docker_executable=/usr/bin/docker
bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt
bamboo_planRepository_branch=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir
bamboo_capability_system_git_executable=/usr/bin/git
bamboo_repository_127172620_name=clowder
bamboo_planRepository_1_previousRevision=409822eb1457406de650aa97646de329789c4035
bamboo_repository_git_username=
bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs
bamboo_planRepository_1_type=stash-rep
bamboo_planRepository_branchName=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
bamboo_capability_system_hostname=buildserver-2
bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_software_mongo=/usr/bin/mongo
bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl
bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs
bamboo_planRepository_type=stash-rep
bamboo_planRepository_1_username=
bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66
bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_7=/home/bamboo/sbt-0.13.2/bin/sbt compile
bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_9=/home/bamboo/sbt-0.13.2/bin/sbt doc
bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_command_8=/home/bamboo/sbt-0.13.2/bin/sbt test-only integration.APITestSuite
bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1
bamboo_planKey=CATS-CORE676
bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_planRepository_username=
bamboo_repository_127172620_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66
bamboo_repository_127172620_revision_number=9f7ad73e802292c4231ee5de83aa0e0034fc8daa
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_planRepository_1_branchName=bugfix/CATS-669-extractor-timestamps-off-on-sead2-dev
03-Oct-2016 14:28:06 Sending build context to Docker daemon 557.1 kB
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03-Oct-2016 14:28:09 Sending build context to Docker daemon 132.6 MB
03-Oct-2016 14:28:09 Sending build context to Docker daemon 133.1 MB
03-Oct-2016 14:28:09 Sending build context to Docker daemon 133.7 MB
03-Oct-2016 14:28:09 Sending build context to Docker daemon 134.3 MB
03-Oct-2016 14:28:09 Sending build context to Docker daemon 134.8 MB
03-Oct-2016 14:28:09 Sending build context to Docker daemon 135.4 MB
03-Oct-2016 14:28:09 Sending build context to Docker daemon 135.9 MB
03-Oct-2016 14:28:09 Sending build context to Docker daemon 136.5 MB
03-Oct-2016 14:28:09 Sending build context to Docker daemon   137 MB
03-Oct-2016 14:28:09 Sending build context to Docker daemon 137.4 MB
03-Oct-2016 14:28:09
03-Oct-2016 14:28:09 Step 1 : FROM java:8-jre
03-Oct-2016 14:28:09 8-jre: Pulling from library/java
03-Oct-2016 14:28:09 Digest: sha256:b4b9299ec015c17a1e38d6cf4fda5fefe3a383ddbe77f289884679073385bc50
03-Oct-2016 14:28:09 Status: Image is up to date for java:8-jre
03-Oct-2016 14:28:09 ---> e1c2390521a3
03-Oct-2016 14:28:09 Step 2 : MAINTAINER Rob Kooper <kooper@illinois.edu>
03-Oct-2016 14:28:09 ---> Using cache
03-Oct-2016 14:28:09 ---> 8a609af30ce8
03-Oct-2016 14:28:09 Step 3 : EXPOSE 9000
03-Oct-2016 14:28:09 ---> Using cache
03-Oct-2016 14:28:09 ---> b4577abb2b0e
03-Oct-2016 14:28:09 Step 4 : ENV CLOWDER_CONTEXT "/" CLOWDER_ADMINS "" MONGO_URI "" SMTP_HOST "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_URI "" RABBITMQ_MGMT_PORT "" ELASTICSEARCH_SERVICE_CLUSTERNAME "clowder" ELASTICSEARCH_SERVICE_SERVER "" ELASTICSEARCH_SERVICE_PORT "" TOOLMANAGER_URI ""
03-Oct-2016 14:28:09 ---> Using cache
03-Oct-2016 14:28:09 ---> 9273ffcdb181
03-Oct-2016 14:28:09 Step 5 : RUN useradd -s /bin/bash clowder
03-Oct-2016 14:28:09 ---> Using cache
03-Oct-2016 14:28:09 ---> fa0da17206de
03-Oct-2016 14:28:09 Step 6 : COPY files entrypoint.sh /home/clowder/
03-Oct-2016 14:28:14 ---> 94b144ecbac0
03-Oct-2016 14:28:14 Removing intermediate container 02a7c0b7ebe4
03-Oct-2016 14:28:14 Step 7 : RUN mkdir -p /home/clowder/clowder/custom /home/clowder/clowder/logs     && chown clowder /home/clowder/clowder /home/clowder/clowder/custom /home/clowder/clowder/logs
03-Oct-2016 14:28:14 ---> Running in 6d97ce14e707
03-Oct-2016 14:28:15 ---> 09371c7c487c
03-Oct-2016 14:28:15 Removing intermediate container 6d97ce14e707
03-Oct-2016 14:28:15 Step 8 : ENTRYPOINT /home/clowder/entrypoint.sh
03-Oct-2016 14:28:15 ---> Running in 818cadf7e769
03-Oct-2016 14:28:15 ---> 9704ca9cb7f5
03-Oct-2016 14:28:15 Removing intermediate container 818cadf7e769
03-Oct-2016 14:28:15 Step 9 : CMD server
03-Oct-2016 14:28:15 ---> Running in 11c5fd819325
03-Oct-2016 14:28:15 ---> 001c907ab877
03-Oct-2016 14:28:15 Removing intermediate container 11c5fd819325
03-Oct-2016 14:28:15 Step 10 : USER clowder
03-Oct-2016 14:28:15 ---> Running in eeaf1752c14e
03-Oct-2016 14:28:15 ---> af871d1a9efd
03-Oct-2016 14:28:15 Removing intermediate container eeaf1752c14e
03-Oct-2016 14:28:15 Successfully built af871d1a9efd
03-Oct-2016 14:28:15 Sending build context to Docker daemon 22.02 kB
03-Oct-2016 14:28:15
03-Oct-2016 14:28:16 Step 1 : FROM ubuntu
03-Oct-2016 14:28:16 latest: Pulling from library/ubuntu
03-Oct-2016 14:28:16 Digest: sha256:28d4c5234db8d5a634d5e621c363d900f8f241240ee0a6a978784c978fe9c737
03-Oct-2016 14:28:16 Status: Image is up to date for ubuntu:latest
03-Oct-2016 14:28:16 ---> c73a085dc378
03-Oct-2016 14:28:16 Step 2 : RUN apt-get -y update     && apt-get -y install curl unzip docker.io python python-dev python-pip     && pip install flask-restful     && pip install arrow     && apt-get clean all     && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*     ;
03-Oct-2016 14:28:16 ---> Using cache
03-Oct-2016 14:28:16 ---> dc413d483054
03-Oct-2016 14:28:16 Step 3 : COPY FILES.toolserver /
03-Oct-2016 14:28:16 ---> Using cache
03-Oct-2016 14:28:16 ---> b5f72256c25d
03-Oct-2016 14:28:16 Step 4 : ENV TOOLSERVER_PORT 8082
03-Oct-2016 14:28:16 ---> Using cache
03-Oct-2016 14:28:16 ---> 174df2ebb8d5
03-Oct-2016 14:28:16 Step 5 : CMD /usr/local/bin/usage
03-Oct-2016 14:28:16 ---> Using cache
03-Oct-2016 14:28:16 ---> 5f7f19351c35
03-Oct-2016 14:28:16 Successfully built 5f7f19351c35
03-Oct-2016 14:28:16 Tagged clowder toolserver with local
03-Oct-2016 14:28:16 Tagged clowder toolserver with local
03-Oct-2016 14:28:16 Untagged: toolserver-28222:latest
03-Oct-2016 14:28:16 Untagged: clowder-28222:latest
03-Oct-2016 14:28:16 Finished task 'docker build' with result: Success
03-Oct-2016 14:28:16 Starting task 'junit' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit'
03-Oct-2016 14:28:16 Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE676-JOB1...
03-Oct-2016 14:28:17 Finished task 'junit' with result: Success
03-Oct-2016 14:28:17 Running post build plugin 'Docker Container Cleanup'
03-Oct-2016 14:28:17 Running post build plugin 'NCover Results Collector'
03-Oct-2016 14:28:17 Running post build plugin 'Clover Results Collector'
03-Oct-2016 14:28:17 Running post build plugin 'npm Cache Cleanup'
03-Oct-2016 14:28:17 Running post build plugin 'Artifact Copier'
03-Oct-2016 14:28:17 Publishing an artifact: dist
03-Oct-2016 14:28:25 Finished publishing of artifact Shared artifact: [dist], pattern: [clowder-*.zip] anchored at: [target/universal] in 8.190 s
03-Oct-2016 14:28:25 Publishing an artifact: scaladoc
03-Oct-2016 14:28:26 Finished publishing of artifact Shared artifact: [scaladoc], pattern: [**/*] anchored at: [target/scala-2.10/api] in 1.705 s
03-Oct-2016 14:28:26 Publishing an artifact: manual
03-Oct-2016 14:28:27 Finished publishing of artifact Shared artifact: [manual], pattern: [**/*] anchored at: [doc/src/sphinx/_build/html] in 474.7 ms
03-Oct-2016 14:28:27 Finalising the build...
03-Oct-2016 14:28:27 Stopping timer.
03-Oct-2016 14:28:27 Build CATS-CORE676-JOB1-3 completed.
03-Oct-2016 14:28:27 Running on server: post build plugin 'NCover Results Collector'
03-Oct-2016 14:28:27 Running on server: post build plugin 'Build Hanging Detection Configuration'
03-Oct-2016 14:28:27 Running on server: post build plugin 'Clover Delta Calculator'
03-Oct-2016 14:28:27 Running on server: post build plugin 'Maven Dependencies Postprocessor'
03-Oct-2016 14:28:27 All post build plugins have finished
03-Oct-2016 14:28:27 Generating build results summary...
03-Oct-2016 14:28:27 Saving build results to disk...
03-Oct-2016 14:28:27 Logging substituted variables...
03-Oct-2016 14:28:27 Indexing build results...
03-Oct-2016 14:28:27 Finished building CATS-CORE676-JOB1-3.