Build #17

Plan branch:

Build: #17 was successful

Job: default was successful

Stages & jobs

  1. Default Stage

Build log

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28-Sep-2017 14:13:49 [info]   + {
28-Sep-2017 14:13:49 [info]   "archive" : {
28-Sep-2017 14:13:49 [info]     "exclude" : [ "/foo/bar", "baz", "/*.test", "!/foo/bar/baz" ]
28-Sep-2017 14:13:49 [info]   },
28-Sep-2017 14:13:49 [info]   "Image" : "fid",
28-Sep-2017 14:13:49 [info]   "Format" : "JPEG(JointPhotographicExpertsGroupJFIFformat)",
28-Sep-2017 14:13:49 [info]   "Reason" : "DataSet Test Suite"
28-Sep-2017 14:13:49 [info] }
28-Sep-2017 14:13:49 [info]   + Status_Get=200
28-Sep-2017 14:13:49 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:49 2017-09-28 14:13:49,638 - [DEBUG  ] - application - File1 is File:True
28-Sep-2017 14:13:49 2017-09-28 14:13:49,642 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,643 - [DEBUG  ] - application - Adding user metadata to dataset 59cd49edcb0e31a7587966de
28-Sep-2017 14:13:49 2017-09-28 14:13:49,643 - [DEBUG  ] - application - Adding/modifying user metadata to dataset 59cd49edcb0e31a7587966de : {"Description":"Dataset Zip file Json","Items":"Image files","Other":"Pretty Cool Huh?"}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,646 - [DEBUG  ] - application - userdfSPARQLStore not enabled
28-Sep-2017 14:13:49 [info] - must respond to the addUserMetadata(id: UUID) function routed by POST /api/datasets/:id/usermetadata
28-Sep-2017 14:13:49 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
28-Sep-2017 14:13:49 [info]   + File Pathing /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/test/data/datasets/dataset-test-user.json
28-Sep-2017 14:13:49 [info]   + Pretty JSON format
28-Sep-2017 14:13:49 [info]   + {
28-Sep-2017 14:13:49 [info]   "Description" : "Dataset Zip file Json",
28-Sep-2017 14:13:49 [info]   "Items" : "Image files",
28-Sep-2017 14:13:49 [info]   "Other" : "Pretty Cool Huh?"
28-Sep-2017 14:13:49 [info] }
28-Sep-2017 14:13:49 [info]   + Status_Get=200
28-Sep-2017 14:13:49 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:49 2017-09-28 14:13:49,653 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,655 - [DEBUG  ] - application - retmd: { "Description" : "Dataset Zip file Json" , "Items" : "Image files" , "Other" : "Pretty Cool Huh?"}
28-Sep-2017 14:13:49 [info] - must respond to the getUserMetadataJSON(id: UUID) function routed by GET /api/datasets/:id/usermetadata
28-Sep-2017 14:13:49 [info]   + Status_Get=200
28-Sep-2017 14:13:49 [info]   + contentType_Get=Some(text/plain)
28-Sep-2017 14:13:49 [info]   + Pretty JSON format
28-Sep-2017 14:13:49 [info]   + {
28-Sep-2017 14:13:49 [info]   "Description" : "Dataset Zip file Json",
28-Sep-2017 14:13:49 [info]   "Items" : "Image files",
28-Sep-2017 14:13:49 [info]   "Other" : "Pretty Cool Huh?"
28-Sep-2017 14:13:49 [info] }
28-Sep-2017 14:13:49 2017-09-28 14:13:49,659 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 [info] - must respond to the getTechnicalMetadataJSON(id: UUID) function routed by GET /api/datasets/:id/technicalmetadatajson
28-Sep-2017 14:13:49 [info]   + Status_Get=200
28-Sep-2017 14:13:49 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:49 [info]   + Pretty JSON format
28-Sep-2017 14:13:49 [info]   + [ {
28-Sep-2017 14:13:49 [info]   "archive" : {
28-Sep-2017 14:13:49 [info]     "exclude" : [ "/foo/bar", "baz", "/*.test", "!/foo/bar/baz" ]
28-Sep-2017 14:13:49 [info]   },
28-Sep-2017 14:13:49 [info]   "Image" : "fid",
28-Sep-2017 14:13:49 [info]   "Format" : "JPEG(JointPhotographicExpertsGroupJFIFformat)",
28-Sep-2017 14:13:49 [info]   "Reason" : "DataSet Test Suite"
28-Sep-2017 14:13:49 [info] } ]
28-Sep-2017 14:13:49 2017-09-28 14:13:49,671 - [DEBUG  ] - application - File1 is File:True
28-Sep-2017 14:13:49 2017-09-28 14:13:49,677 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,678 - [DEBUG  ] - application - Searching datasets' metadata for search tree.
28-Sep-2017 14:13:49 2017-09-28 14:13:49,678 - [DEBUG  ] - application - thejsson: {"Reason":".*Suite.*"}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,679 - [DEBUG  ] - application - top: {Reason=.*Suite.*}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,680 - [DEBUG  ] - application - req: {Reason=.*Suite.*}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,684 - [DEBUG  ] - application - thequery: { "$and" : [ { "$or" : [ { "userMetadata.Reason" : ".*Suite.*"} , { "metadata.Reason" : ".*Suite.*"} , { "datasetXmlMetadata.xmlMetadata.Reason" : ".*Suite.*"}]}]}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,685 - [DEBUG  ] - application - Search completed. Returning datasets list.
28-Sep-2017 14:13:49 2017-09-28 14:13:49,686 - [DEBUG  ] - application - thelist: []
28-Sep-2017 14:13:49 [info] - must respond to the searchDatasetsGeneralMetadata() function routed by POST /api/datasets/searchmetadata 
28-Sep-2017 14:13:49 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
28-Sep-2017 14:13:49 [info]   + File Pathing /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/test/data/datasets/dataset-search-general.json
28-Sep-2017 14:13:49 [info]   + Pretty JSON format
28-Sep-2017 14:13:49 [info]   + {
28-Sep-2017 14:13:49 [info]   "Reason" : ".*Suite.*"
28-Sep-2017 14:13:49 [info] }
28-Sep-2017 14:13:49 [info]   + Status=200
28-Sep-2017 14:13:49 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:49 [info]   + content[]
28-Sep-2017 14:13:49 2017-09-28 14:13:49,688 - [DEBUG  ] - application - File1 is File:True
28-Sep-2017 14:13:49 2017-09-28 14:13:49,692 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,692 - [DEBUG  ] - application - Searching datasets' user metadata for search tree.
28-Sep-2017 14:13:49 2017-09-28 14:13:49,693 - [DEBUG  ] - application - thejsson: {"Other":".*Pretty Cool.*"}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,693 - [DEBUG  ] - application - top: {Other=.*Pretty Cool.*}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,693 - [DEBUG  ] - application - req: {Other=.*Pretty Cool.*}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,694 - [DEBUG  ] - application - thequery: { "$and" : [ { "userMetadata.Other" : ".*Pretty Cool.*"}]}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,694 - [DEBUG  ] - application - Search completed. Returning datasets list.
28-Sep-2017 14:13:49 2017-09-28 14:13:49,695 - [DEBUG  ] - application - thelist: []
28-Sep-2017 14:13:49 [info] - must respond to the searchDatasetsUserMetadata() function routed by POST /api/datasets/searchmetadata 
28-Sep-2017 14:13:49 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
28-Sep-2017 14:13:49 [info]   + File Pathing /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/test/data/datasets/dataset-search-user.json
28-Sep-2017 14:13:49 [info]   + Pretty JSON format
28-Sep-2017 14:13:49 [info]   + {
28-Sep-2017 14:13:49 [info]   "Other" : ".*Pretty Cool.*"
28-Sep-2017 14:13:49 [info] }
28-Sep-2017 14:13:49 [info]   + Status=200
28-Sep-2017 14:13:49 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:49 [info]   + content[]
28-Sep-2017 14:13:49 2017-09-28 14:13:49,700 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,705 - [DEBUG  ] - application - userdfSPARQLStore not enabled
28-Sep-2017 14:13:49 2017-09-28 14:13:49,721 - [DEBUG  ] - application - Removing XML metadata belonging to file 59cd49edcb0e31a7587966ca from dataset 59cd49edcb0e31a7587966de.
28-Sep-2017 14:13:49 2017-09-28 14:13:49,727 - [ERROR  ] - application - File not found: 59cd49edcb0e31a7587966ca
28-Sep-2017 14:13:49 [info] - must respond to the deleteDataset(id:UUID) function routed by DELETE /api/datasets/:id 
28-Sep-2017 14:13:49 [info]   + Status_Get=200
28-Sep-2017 14:13:49 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:49 [info]   + Pretty JSON format
28-Sep-2017 14:13:49 [info]   + {
28-Sep-2017 14:13:49 [info]   "status" : "success"
28-Sep-2017 14:13:49 [info] }
28-Sep-2017 14:13:49 [info] CollectionsAPIAppSpec:
28-Sep-2017 14:13:49 [info] The Collections API Spec
28-Sep-2017 14:13:49 [info] - must provide a FakeApplication
28-Sep-2017 14:13:49 [info] - must make the FakeApplication available implicitly
28-Sep-2017 14:13:49 [info] - must start the FakeApplication
28-Sep-2017 14:13:49 [info] The Collections API Spec
28-Sep-2017 14:13:49 2017-09-28 14:13:49,733 - [DEBUG  ] - application - File1 is File:True
28-Sep-2017 14:13:49 2017-09-28 14:13:49,757 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,757 - [DEBUG  ] - application - Creating new collection
28-Sep-2017 14:13:49 [info] - must respond to the createCollection() function routed by POST /api/collections for Collection 1
28-Sep-2017 14:13:49 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
28-Sep-2017 14:13:49 [info]   + File Pathing /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/test/data/collections/data-test-collection.json
28-Sep-2017 14:13:49 [info]   + Pretty JSON format
28-Sep-2017 14:13:49 [info]   + {
28-Sep-2017 14:13:49 [info]   "description" : "Collection 1 Tests Description",
28-Sep-2017 14:13:49 [info]   "name" : "Collection 1 Test Suite",
28-Sep-2017 14:13:49 [info]   "space" : "default"
28-Sep-2017 14:13:49 [info] }
28-Sep-2017 14:13:49 [info]   + Status=200
28-Sep-2017 14:13:49 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:49 [info]   + content{"id":"59cd49edcb0e31a7587966f6"}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,783 - [DEBUG  ] - application - File1 is File:True
28-Sep-2017 14:13:49 2017-09-28 14:13:49,786 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,786 - [DEBUG  ] - application - Creating new collection
28-Sep-2017 14:13:49 [info] - must respond to the createCollection() function routed by POST /api/collections for Collection 2
28-Sep-2017 14:13:49 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
28-Sep-2017 14:13:49 [info]   + File Pathing /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/test/data/collections/data-test-collection-1.json
28-Sep-2017 14:13:49 [info]   + Pretty JSON format
28-Sep-2017 14:13:49 [info]   + {
28-Sep-2017 14:13:49 [info]   "description" : "Collection 2 Tests Description",
28-Sep-2017 14:13:49 [info]   "name" : "Collection 2 Test Suite",
28-Sep-2017 14:13:49 [info]   "space" : "default"
28-Sep-2017 14:13:49 [info] }
28-Sep-2017 14:13:49 [info]   + Status=200
28-Sep-2017 14:13:49 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:49 [info]   + content{"id":"59cd49edcb0e31a7587966f7"}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,790 - [DEBUG  ] - application - File1 is File:True
28-Sep-2017 14:13:49 2017-09-28 14:13:49,866 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,870 - [DEBUG  ] - application - created file 59cd49edcb0e31a7587966f9
28-Sep-2017 14:13:49 2017-09-28 14:13:49,870 - [DEBUG  ] - application - Uploading file dataset-image.zip
28-Sep-2017 14:13:49 2017-09-28 14:13:49,877 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,877 - [DEBUG  ] - application - --- API Creating new dataset ----
28-Sep-2017 14:13:49 2017-09-28 14:13:49,882 - [ERROR  ] - application - Dataset not found: 59cd49edcb0e31a758796704
28-Sep-2017 14:13:49 2017-09-28 14:13:49,888 - [DEBUG  ] - application - ----- Adding file to dataset completed
28-Sep-2017 14:13:49 [info] - must respond to the createDataset() function routed by POST /api/datasets for Dataset 1 Creation
28-Sep-2017 14:13:49 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
28-Sep-2017 14:13:49 [info]   + Status=200
28-Sep-2017 14:13:49 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:49 [info]   + contentAsString{"id":"59cd49edcb0e31a758796704"}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,892 - [DEBUG  ] - application - File1 is File:True
28-Sep-2017 14:13:49 2017-09-28 14:13:49,906 - [DEBUG  ] - application - Uploading Completed
28-Sep-2017 14:13:49 2017-09-28 14:13:49,963 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,966 - [DEBUG  ] - application - created file 59cd49edcb0e31a758796711
28-Sep-2017 14:13:49 2017-09-28 14:13:49,967 - [DEBUG  ] - application - Uploading file dataset-image-1.zip
28-Sep-2017 14:13:49 2017-09-28 14:13:49,969 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,970 - [DEBUG  ] - application - --- API Creating new dataset ----
28-Sep-2017 14:13:49 2017-09-28 14:13:49,973 - [ERROR  ] - application - Dataset not found: 59cd49edcb0e31a758796718
28-Sep-2017 14:13:49 2017-09-28 14:13:49,977 - [DEBUG  ] - application - ----- Adding file to dataset completed
28-Sep-2017 14:13:49 [info] - must respond to the createDataset() function routed by POST /api/datasets for Dataset 2 Creation
28-Sep-2017 14:13:49 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
28-Sep-2017 14:13:49 [info]   + Status=200
28-Sep-2017 14:13:49 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:49 [info]   + contentAsString{"id":"59cd49edcb0e31a758796718"}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,982 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 2017-09-28 14:13:49,983 - [DEBUG  ] - application - Adding dataset 59cd49edcb0e31a758796704 to collection 59cd49edcb0e31a7587966f6
28-Sep-2017 14:13:49 2017-09-28 14:13:49,987 - [DEBUG  ] - application - Adding dataset to collection completed
28-Sep-2017 14:13:49 [info] - must respond to the attachDataset(coll_id:UUID, ds_id:UUID) function routed by POST /api/collections/:coll_id/datasets/:ds_id for dataset 1
28-Sep-2017 14:13:49 [info]   + Status=200
28-Sep-2017 14:13:49 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:49 [info]   + contentAsString{"datasetsInCollection":1}
28-Sep-2017 14:13:49 2017-09-28 14:13:49,993 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:49 [info] - must respond to the listInCollection(coll_id: UUID) function routed by GET /api/collections/:coll_id/getDatasets
28-Sep-2017 14:13:49 [info]   + Status_Get=200
28-Sep-2017 14:13:49 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:49 [info]   + Pretty JSON format
28-Sep-2017 14:13:49 [info]   + [ {
28-Sep-2017 14:13:49 [info]   "id" : "59cd49edcb0e31a758796704",
28-Sep-2017 14:13:49 [info]   "name" : "Dataset 1 API Test Creation",
28-Sep-2017 14:13:49 [info]   "description" : "Part 1 of Dataset API Test Suite",
28-Sep-2017 14:13:49 [info]   "created" : "Thu Sep 28 14:13:49 CDT 2017",
28-Sep-2017 14:13:49 [info]   "thumbnail" : "None",
28-Sep-2017 14:13:49 [info]   "authorId" : "000000000000000000000000",
28-Sep-2017 14:13:49 [info]   "spaces" : [ ]
28-Sep-2017 14:13:49 [info] } ]
28-Sep-2017 14:13:49 2017-09-28 14:13:49,998 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 [info] - must respond to the listOutsideCollection(coll_id: UUID) function routed by GET /api/datasets/listOutsideCollection/:coll_id
28-Sep-2017 14:13:50 [info]   + Status_Get=200
28-Sep-2017 14:13:50 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + [ {
28-Sep-2017 14:13:50 [info]   "id" : "59cd49edcb0e31a758796718",
28-Sep-2017 14:13:50 [info]   "name" : "Dataset 2 API Test Creation",
28-Sep-2017 14:13:50 [info]   "description" : "Part 2 of Dataset API Test Suite",
28-Sep-2017 14:13:50 [info]   "created" : "Thu Sep 28 14:13:49 CDT 2017",
28-Sep-2017 14:13:50 [info]   "thumbnail" : "None",
28-Sep-2017 14:13:50 [info]   "authorId" : "000000000000000000000000",
28-Sep-2017 14:13:50 [info]   "spaces" : [ ]
28-Sep-2017 14:13:50 [info] }, {
28-Sep-2017 14:13:50 [info]   "id" : "59cd49edcb0e31a758796704",
28-Sep-2017 14:13:50 [info]   "name" : "Dataset 1 API Test Creation",
28-Sep-2017 14:13:50 [info]   "description" : "Part 1 of Dataset API Test Suite",
28-Sep-2017 14:13:50 [info]   "created" : "Thu Sep 28 14:13:49 CDT 2017",
28-Sep-2017 14:13:50 [info]   "thumbnail" : "None",
28-Sep-2017 14:13:50 [info]   "authorId" : "000000000000000000000000",
28-Sep-2017 14:13:50 [info]   "spaces" : [ ]
28-Sep-2017 14:13:50 [info] } ]
28-Sep-2017 14:13:50 2017-09-28 14:13:50,009 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,010 - [DEBUG  ] - application - Adding dataset 59cd49edcb0e31a758796718 to collection 59cd49edcb0e31a7587966f6
28-Sep-2017 14:13:50 2017-09-28 14:13:50,012 - [DEBUG  ] - application - Adding dataset to collection completed
28-Sep-2017 14:13:50 2017-09-28 14:13:50,015 - [DEBUG  ] - application - Uploading Completed
28-Sep-2017 14:13:50 [info] - must respond to the attachDataset(coll_id:UUID, ds_id:UUID) function routed by POST /api/collections/:coll_id/datasets/:ds_id for dataset 2
28-Sep-2017 14:13:50 [info]   + Status=200
28-Sep-2017 14:13:50 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:50 [info]   + contentAsString{"datasetsInCollection":2}
28-Sep-2017 14:13:50 2017-09-28 14:13:50,018 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,019 - [DEBUG  ] - application - Removing dataset 59cd49edcb0e31a758796718 from collection 59cd49edcb0e31a7587966f6
28-Sep-2017 14:13:50 2017-09-28 14:13:50,023 - [DEBUG  ] - application - Removing dataset from collection completed
28-Sep-2017 14:13:50 [info] - must respond to the removeDataset(coll_id:UUID, ds_id:UUID, ignoreNotFound) function routed by DELETE /api/collections/:coll_id/datasets/:ds_id for dataset 2
28-Sep-2017 14:13:50 [info]   + Status=200
28-Sep-2017 14:13:50 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:50 [info]   + contentAsString{"status":"success"}
28-Sep-2017 14:13:50 2017-09-28 14:13:50,029 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,029 - [DEBUG  ] - application - Removing dataset 59cd49edcb0e31a758796704 from collection 59cd49edcb0e31a7587966f6
28-Sep-2017 14:13:50 2017-09-28 14:13:50,031 - [DEBUG  ] - application - Removing dataset from collection completed
28-Sep-2017 14:13:50 [info] - must respond to the removeDataset(coll_id:UUID, ds_id:UUID, ignoreNoteFound) function routed by POST /api/collections/:coll_id/datasets/:ds_id/:ignoreNotFound for dataset 2
28-Sep-2017 14:13:50 [info]   + Status=200
28-Sep-2017 14:13:50 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:50 [info]   + contentAsString{"status":"success"}
28-Sep-2017 14:13:50 2017-09-28 14:13:50,037 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,038 - [DEBUG  ] - application - userdfSPARQLStore not enabled
28-Sep-2017 14:13:50 2017-09-28 14:13:50,041 - [DEBUG  ] - application - Removing XML metadata belonging to file 59cd49edcb0e31a7587966f9 from dataset 59cd49edcb0e31a758796704.
28-Sep-2017 14:13:50 2017-09-28 14:13:50,046 - [ERROR  ] - application - File not found: 59cd49edcb0e31a7587966f9
28-Sep-2017 14:13:50 [info] - must respond to the deleteDataset(id:UUID) function routed by DELETE /api/datasets/:id for Dataset 1
28-Sep-2017 14:13:50 [info]   + Status_Get=200
28-Sep-2017 14:13:50 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + {
28-Sep-2017 14:13:50 [info]   "status" : "success"
28-Sep-2017 14:13:50 [info] }
28-Sep-2017 14:13:50 2017-09-28 14:13:50,049 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,049 - [DEBUG  ] - application - userdfSPARQLStore not enabled
28-Sep-2017 14:13:50 2017-09-28 14:13:50,053 - [DEBUG  ] - application - Removing XML metadata belonging to file 59cd49edcb0e31a758796711 from dataset 59cd49edcb0e31a758796718.
28-Sep-2017 14:13:50 2017-09-28 14:13:50,065 - [ERROR  ] - application - File not found: 59cd49edcb0e31a758796711
28-Sep-2017 14:13:50 [info] - must respond to the deleteDataset(id:UUID) function routed by DELETE /api/datasets/:id for Dataset 2
28-Sep-2017 14:13:50 [info]   + Status_Get=200
28-Sep-2017 14:13:50 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + {
28-Sep-2017 14:13:50 [info]   "status" : "success"
28-Sep-2017 14:13:50 [info] }
28-Sep-2017 14:13:50 2017-09-28 14:13:50,069 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 [info] - must respond to the listCollections() function routed by GET /api/collections
28-Sep-2017 14:13:50 [info]   + Status=200
28-Sep-2017 14:13:50 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:50 [info]   + content[{"id":"59cd49edcb0e31a7587966f7","collectionname":"Collection 2 Test Suite","description":"Collection 2 Tests Description","created":"Thu Sep 28 14:13:49 CDT 2017","thumbnail":"None","authorId":"000000000000000000000000"},{"id":"59cd49edcb0e31a7587966f6","collectionname":"Collection 1 Test Suite","description":"Collection 1 Tests Description","created":"Thu Sep 28 14:13:49 CDT 2017","thumbnail":"None","authorId":"000000000000000000000000"}]
28-Sep-2017 14:13:50 2017-09-28 14:13:50,077 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 [info] - must respond to the listCollections() function routed by GET /api/collections/list
28-Sep-2017 14:13:50 [info]   + Status=200
28-Sep-2017 14:13:50 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:50 [info]   + content[{"id":"59cd49edcb0e31a7587966f7","collectionname":"Collection 2 Test Suite","description":"Collection 2 Tests Description","created":"Thu Sep 28 14:13:49 CDT 2017","thumbnail":"None","authorId":"000000000000000000000000"},{"id":"59cd49edcb0e31a7587966f6","collectionname":"Collection 1 Test Suite","description":"Collection 1 Tests Description","created":"Thu Sep 28 14:13:49 CDT 2017","thumbnail":"None","authorId":"000000000000000000000000"}]
28-Sep-2017 14:13:50 2017-09-28 14:13:50,083 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 [info] - must respond to the removeCollection(coll_id:UUID) function routed by POST /api/collections/:coll_id/remove 
28-Sep-2017 14:13:50 [info]   + Status_Get=200
28-Sep-2017 14:13:50 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + {
28-Sep-2017 14:13:50 [info]   "status" : "success"
28-Sep-2017 14:13:50 [info] }
28-Sep-2017 14:13:50 2017-09-28 14:13:50,091 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 [info] - must respond to the removeCollection(coll_id:UUID) function routed by DELETE /api/collections/:id 
28-Sep-2017 14:13:50 [info]   + Status_Get=200
28-Sep-2017 14:13:50 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + {
28-Sep-2017 14:13:50 [info]   "status" : "success"
28-Sep-2017 14:13:50 [info] }
28-Sep-2017 14:13:50 2017-09-28 14:13:50,099 - [DEBUG  ] - application - File1 is File:True
28-Sep-2017 14:13:50 [info] PreviewsAPIAppSpec:
28-Sep-2017 14:13:50 [info] The Previews API Spec
28-Sep-2017 14:13:50 [info] - must provide a FakeApplication
28-Sep-2017 14:13:50 [info] - must make the FakeApplication available implicitly
28-Sep-2017 14:13:50 [info] - must start the FakeApplication
28-Sep-2017 14:13:50 [info] The Previews API Spec
28-Sep-2017 14:13:50 2017-09-28 14:13:50,132 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,135 - [DEBUG  ] - application - created file 59cd49eecb0e31a758796732
28-Sep-2017 14:13:50 2017-09-28 14:13:50,135 - [DEBUG  ] - application - Uploading file morrowplots.jpg
28-Sep-2017 14:13:50 [info] - must respond to the Upload File
28-Sep-2017 14:13:50 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
28-Sep-2017 14:13:50 [info]   + Status=200
28-Sep-2017 14:13:50 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:50 [info]   + contentAsString{"id":"59cd49eecb0e31a758796732"}
28-Sep-2017 14:13:50 2017-09-28 14:13:50,145 - [DEBUG  ] - application - Uploading Completed
28-Sep-2017 14:13:50 2017-09-28 14:13:50,145 - [DEBUG  ] - application - File1 is File:True
28-Sep-2017 14:13:50 2017-09-28 14:13:50,162 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,163 - [DEBUG  ] - application - ########Uploading Preview----morrowplots-preview.jpg
28-Sep-2017 14:13:50 2017-09-28 14:13:50,406 - [DEBUG  ] - application - ctp: Some(application/octet-stream)
28-Sep-2017 14:13:50 2017-09-28 14:13:50,411 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,424 - [DEBUG  ] - application - : morrowplots-preview.jpg
28-Sep-2017 14:13:50 [info] - must respond to the upload() and download() function routed by POST/GET /api/previews
28-Sep-2017 14:13:50 [info]   + Working Directory: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
28-Sep-2017 14:13:50 [info]   + Status=200
28-Sep-2017 14:13:50 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:50 [info]   + contentAsString{"id":"59cd49eecb0e31a75879673d"}
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + {
28-Sep-2017 14:13:50 [info]   "id" : "59cd49eecb0e31a75879673d"
28-Sep-2017 14:13:50 [info] }
28-Sep-2017 14:13:50 [info]   + id value 59cd49eecb0e31a75879673d
28-Sep-2017 14:13:50 [info]   + Status=200
28-Sep-2017 14:13:50 [info]   + contentType=Some(image/jpeg)
28-Sep-2017 14:13:50 2017-09-28 14:13:50,437 - [DEBUG  ] - application - File2 is File:True
28-Sep-2017 14:13:50 2017-09-28 14:13:50,440 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,441 - [DEBUG  ] - application - {"Image":"fid","extractor_id":"test-extractor"}
28-Sep-2017 14:13:50 2017-09-28 14:13:50,442 - [DEBUG  ] - application - ListBuffer((Image,"fid"), (extractor_id,"test-extractor"))
28-Sep-2017 14:13:50 2017-09-28 14:13:50,444 - [DEBUG  ] - application - Updating previews.files 59cd49eecb0e31a75879673d with Map(Image -> fid, extractor_id -> test-extractor)
28-Sep-2017 14:13:50 2017-09-28 14:13:50,448 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,449 - [DEBUG  ] - application - api.Files.attachPreview(): No "extractor_id" specified in request, set it to None.  request.body: {}
28-Sep-2017 14:13:50 2017-09-28 14:13:50,450 - [DEBUG  ] - application - attachToFile: extractorId is 'Some(Other)'.
28-Sep-2017 14:13:50 2017-09-28 14:13:50,451 - [DEBUG  ] - application - Updating previews.files 59cd49eecb0e31a75879673d with Map()
28-Sep-2017 14:13:50 2017-09-28 14:13:50,455 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,459 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 [info]   + contentAsString2000
28-Sep-2017 14:13:50
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28-Sep-2017 14:13:50
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28-Sep-2017 14:13:50 [info] �AU��d��sך�E%fu*��'����'��7������g�����=Fs�eg4�H��,�Ǔ˨l۲�9ݞ�E$���ӣ��������K7���%�N���,�Q����+��̶���F�'pRc]�~l�        ����oq�6Hӯ�ķLl�~خ�<���n���T����Ǯ�2��Y�#�[xZV��xFfi���Gf���':�x�m6�.c��.C0�m�>����n-j4�#�Z��j�f�>i�Tq��FG9'9��}���T��_}�O
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28-Sep-2017 14:13:50 [info] Cms��kȡ�,*���c�:c+����Xt�_���ڙ�V�d��d5�u;��I�J�֣���Z���Uj�[O ����\�XHN��2��=�wV���������+?i�t&49���������<_~!{���e�� �_\7.]��B�nVb�c�����E� �e���අ�H-�nUCgqt�y��A�`���#�(��h��Uy��y���Gs�Ȓ.IX����J������֛wo�<o�"���$|s�m��$r�{����"�07�e$�~�}��"tMV�~3Ũ2���
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28-Sep-2017 14:13:50 [���j�N��_�y,_�L� �ꖶ�|M�-Q�b];±@�ȅT`<�G��RT�g���N/�6�V���k�u`�E�����&�����ټQ��Mu8V�� rz�ڑ�^��x�%�o-��0��q�������_{�3O�O��#����f|+�NX�����B5�F�%����F�K�i&X��l�z�I��\|�4x�W��t�-�ͩ遱�y1� ln��+���XIw��o�7`���T~'�Y��n��\�=�A9ϯ��d�V�@�I�&r�����٣Ii���h"r�� �pFX�����J~������I$��U��q�x��Q�u �:.8�0q�1]�x�5E�q������<�Mǰ��weX�<zg9��ƚ�+�1uw���߲�f����fS����Z���+\�2001�����O��^���w_�r�&� [ɔ        �0_���Ɵ�        ����������1K��ɻ�'���<N�\����]��ӎ:~�k`4��ܘ(q�z��+�H�Cp�4���
28-Sep-2017 14:13:50 [info] �$Fn�hȚ}��c������S{\���/�~$xz/�cY���֣Ҷ�)�ȗz���ˉ�_p:zQEg.��cJ;�[) 1T1��s�0j#[�v�m�a1R��t�<s�:c�z(����ӳ�^{����>G���׭Ok}�ݪ����'���(��K)ǫ����e��r��#�>�[�b��������W,�OC9h��
28-Sep-2017 14:13:50
28-Sep-2017 14:13:50 [info] 0
28-Sep-2017 14:13:50
28-Sep-2017 14:13:50 [info]
28-Sep-2017 14:13:50
28-Sep-2017 14:13:50 [info]
28-Sep-2017 14:13:50 [info] - must respond to the uploadMetadata(id: UUID) and getMetadata(id: UUID) function routed by POST/GET /api/previews/:id/metadata
28-Sep-2017 14:13:50 [info]   + File Pathing /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/test/data/previews/data-test-general.json
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + {
28-Sep-2017 14:13:50 [info]   "Image" : "fid",
28-Sep-2017 14:13:50 [info]   "extractor_id" : "test-extractor"
28-Sep-2017 14:13:50 [info] }
28-Sep-2017 14:13:50 [info]   + Status_Post=200
28-Sep-2017 14:13:50 [info]   + contentType_Post=Some(application/json)
28-Sep-2017 14:13:50 [info] - must respond to the attachPreview(file_id:UUID, preview:UUID) function routed by POST /api/files/:file_id/previews/:p_id 
28-Sep-2017 14:13:50 [info]   + Status_Post=200
28-Sep-2017 14:13:50 [info]   + contentType_Post=Some(application/json)
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + {
28-Sep-2017 14:13:50 [info]   "status" : "success"
28-Sep-2017 14:13:50 [info] }
28-Sep-2017 14:13:50 [info] - must respond to the filePreviewsList(id: UUID) function routed by GET /api/files/:file_id/listpreviews
28-Sep-2017 14:13:50 [info]   + Status_get=200
28-Sep-2017 14:13:50 [info]   + contentType_get=Some(application/json)
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + [ {
28-Sep-2017 14:13:50 [info]   "id" : "59cd49eecb0e31a75879673d",
28-Sep-2017 14:13:50 [info]   "filename" : "morrowplots-preview.jpg",
28-Sep-2017 14:13:50 [info]   "contentType" : "image/jpeg"
28-Sep-2017 14:13:50 [info] } ]
28-Sep-2017 14:13:50 [info] - must respond to the getPreviews(id: UUID) function routed by GET /api/files/:file_id/getPreviews
28-Sep-2017 14:13:50 [info]   + Status_Get=200
28-Sep-2017 14:13:50 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + [ {
28-Sep-2017 14:13:50 [info]   "file_id" : "59cd49eecb0e31a758796732",
28-Sep-2017 14:13:50 [info]   "previews" : [ {
28-Sep-2017 14:13:50 [info]     "pv_route" : "/api/previews/59cd49eecb0e31a75879673d",
28-Sep-2017 14:13:50 [info]     "p_main" : "thumbnail-previewer.js",
28-Sep-2017 14:13:50 [info]     "pv_id" : "59cd49eecb0e31a75879673d",
28-Sep-2017 14:13:50 [info]     "p_path" : "/assets/javascripts/previewers/thumbnail",
28-Sep-2017 14:13:50 [info]     "p_id" : "Thumbnail",
28-Sep-2017 14:13:50 [info]     "pv_length" : "9757",
28-Sep-2017 14:13:50 [info]     "pv_contenttype" : "image/jpeg"
28-Sep-2017 14:13:50 [info]   } ]
28-Sep-2017 14:13:50 [info] } ]
28-Sep-2017 14:13:50 2017-09-28 14:13:50,789 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 [info] - must respond to the list() function routed by GET /api/previews
28-Sep-2017 14:13:50 [info]   + Status=200
28-Sep-2017 14:13:50 [info]   + contentType=Some(application/json)
28-Sep-2017 14:13:50 [info]   + content[{"id":"59cd49eecb0e31a75879673d","filename":"morrowplots-preview.jpg","contentType":"image/jpeg"}]
28-Sep-2017 14:13:50 2017-09-28 14:13:50,794 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 [info] - must respond to the removePreview(id:UUID) function routed by DELETE /api/previews/:id for morrowplots preview file
28-Sep-2017 14:13:50 [info]   + Status_Get=200
28-Sep-2017 14:13:50 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + {
28-Sep-2017 14:13:50 [info]   "status" : "success"
28-Sep-2017 14:13:50 [info] }
28-Sep-2017 14:13:50 2017-09-28 14:13:50,801 - [DEBUG  ] - application - Getting value for tos.date
28-Sep-2017 14:13:50 2017-09-28 14:13:50,803 - [DEBUG  ] - application - Deleting file from indexes morrowplots.jpg
28-Sep-2017 14:13:50 2017-09-28 14:13:50,803 - [DEBUG  ] - application - Deleting file: morrowplots.jpg
28-Sep-2017 14:13:50 [info] - must respond to the removeFile(id:UUID) function routed by DELETE /api/files/:id 
28-Sep-2017 14:13:50 [info]   + Status_Get=200
28-Sep-2017 14:13:50 [info]   + contentType_Get=Some(application/json)
28-Sep-2017 14:13:50 [info]   + Pretty JSON format
28-Sep-2017 14:13:50 [info]   + {
28-Sep-2017 14:13:50 [info]   "status" : "success"
28-Sep-2017 14:13:50 [info] }
28-Sep-2017 14:13:50 [info] ApplicationSpec:
28-Sep-2017 14:13:50 [info] The Application API Spec
28-Sep-2017 14:13:50 [info] - must provide a FakeApplication
28-Sep-2017 14:13:50 [info] - must make the FakeApplication available implicitly
28-Sep-2017 14:13:50 [info] - must start the FakeApplication
28-Sep-2017 14:13:50 [info] - must send 404 on a bad request
28-Sep-2017 14:13:50 2017-09-28 14:13:50,839 - [DEBUG  ] - application - Loading instance counts from appConfig
28-Sep-2017 14:13:50 2017-09-28 14:13:50,839 - [DEBUG  ] - application - Getting value for countof.datasets
28-Sep-2017 14:13:50 2017-09-28 14:13:50,840 - [DEBUG  ] - application - Getting value for countof.files
28-Sep-2017 14:13:50 2017-09-28 14:13:50,840 - [DEBUG  ] - application - Getting value for countof.bytes
28-Sep-2017 14:13:50 2017-09-28 14:13:50,841 - [DEBUG  ] - application - Getting value for countof.collections
28-Sep-2017 14:13:50 2017-09-28 14:13:50,841 - [DEBUG  ] - application - Getting value for countof.spaces
28-Sep-2017 14:13:50 2017-09-28 14:13:50,842 - [DEBUG  ] - application - Getting value for countof.users
28-Sep-2017 14:13:50 2017-09-28 14:13:50,844 - [DEBUG  ] - application - Getting value for display.name
28-Sep-2017 14:13:50 2017-09-28 14:13:50,845 - [DEBUG  ] - application - Getting value for welcome.message
28-Sep-2017 14:13:50 2017-09-28 14:13:50,856 - [DEBUG  ] - application - Getting value for theme
28-Sep-2017 14:13:51 2017-09-28 14:13:51,050 - [DEBUG  ] - application - Getting value for display.name
28-Sep-2017 14:13:51 2017-09-28 14:13:51,058 - [DEBUG  ] - application - [securesocial] bootstrap path = securesocial/bootstrap/css/bootstrap.min.css
28-Sep-2017 14:13:51 2017-09-28 14:13:51,058 - [DEBUG  ] - application - [securesocial] assets controller = controllers.ReverseAssets
28-Sep-2017 14:13:51 2017-09-28 14:13:51,059 - [DEBUG  ] - application - [securesocial] favicon path = securesocial/images/favicon.png
28-Sep-2017 14:13:51 2017-09-28 14:13:51,059 - [DEBUG  ] - application - [securesocial] Jquery path = securesocial/javascripts/jquery-1.7.1.min.js
28-Sep-2017 14:13:51 2017-09-28 14:13:51,059 - [DEBUG  ] - application - [securesocial] custom css path = None
28-Sep-2017 14:13:51 2017-09-28 14:13:51,062 - [DEBUG  ] - application - Getting value for google.analytics
28-Sep-2017 14:13:51 [info] - must render the index page
28-Sep-2017 14:13:51 2017-09-28 14:13:51,067 - [DEBUG  ] - application - Getting value for theme
28-Sep-2017 14:13:51 2017-09-28 14:13:51,293 - [DEBUG  ] - application - Getting value for display.name
28-Sep-2017 14:13:51 2017-09-28 14:13:51,298 - [DEBUG  ] - application - Getting value for google.analytics
28-Sep-2017 14:13:51 [info] - must render index template
28-Sep-2017 14:13:51 2017-09-28 14:13:51,316 - [INFO   ] - application - [securesocial] unloaded event listener SecureSocialEventListener
28-Sep-2017 14:13:51 2017-09-28 14:13:51,317 - [INFO   ] - application - [securesocial] unloaded identity provider: userpass
28-Sep-2017 14:13:51 2017-09-28 14:13:51,317 - [INFO   ] - application - Application shutdown
28-Sep-2017 14:13:51 2017-09-28 14:13:51,317 - [INFO   ] - application - [securesocial] unloaded password hasher bcrypt
28-Sep-2017 14:13:51 2017-09-28 14:13:51,321 - [INFO   ] - play - Shutdown application default Akka system.
28-Sep-2017 14:13:51 2017-09-28 14:13:51,343 - [DEBUG  ] - application - initializing appConfig counts
28-Sep-2017 14:13:51 [ERROR] [09/28/2017 14:13:51.346] [application-akka.actor.default-dispatcher-5] [ActorSystem(application)] exception while executing timer task
28-Sep-2017 14:13:51 java.lang.IllegalStateException: this Mongo has been closed
28-Sep-2017 14:13:51         at com.mongodb.DBTCPConnector._checkClosed(DBTCPConnector.java:95)
28-Sep-2017 14:13:51         at com.mongodb.DBTCPConnector.innerCall(DBTCPConnector.java:233)
28-Sep-2017 14:13:51         at com.mongodb.DBTCPConnector.call(DBTCPConnector.java:216)
28-Sep-2017 14:13:51         at com.mongodb.DBApiLayer$MyCollection.__find(DBApiLayer.java:288)
28-Sep-2017 14:13:51         at com.mongodb.DB.command(DB.java:262)
28-Sep-2017 14:13:51         at com.mongodb.DB.command(DB.java:244)
28-Sep-2017 14:13:51         at com.mongodb.DBCollection.getCount(DBCollection.java:985)
28-Sep-2017 14:13:51         at com.mongodb.casbah.MongoCollectionBase$class.getCount(MongoCollection.scala:386)
28-Sep-2017 14:13:51         at com.mongodb.casbah.MongoCollection.getCount(MongoCollection.scala:866)
28-Sep-2017 14:13:51         at com.mongodb.casbah.MongoCollectionBase$class.count(MongoCollection.scala:627)
28-Sep-2017 14:13:51         at com.mongodb.casbah.MongoCollection.count(MongoCollection.scala:866)
28-Sep-2017 14:13:51         at com.novus.salat.dao.SalatDAO.count(SalatDAO.scala:508)
28-Sep-2017 14:13:51         at com.novus.salat.dao.ModelCompanion$class.count(ModelCompanion.scala:160)
28-Sep-2017 14:13:51         at services.mongodb.Dataset$.count(MongoDBDatasetService.scala:1483)
28-Sep-2017 14:13:51         at services.mongodb.MongoDBDatasetService.count(MongoDBDatasetService.scala:57)
28-Sep-2017 14:13:51         at Global$$anonfun$onStart$3.apply$mcV$sp(Global.scala:88)
28-Sep-2017 14:13:51         at akka.actor.Scheduler$$anon$11.run(Scheduler.scala:118)
28-Sep-2017 14:13:51         at akka.actor.LightArrayRevolverScheduler$TaskHolder.run(Scheduler.scala:464)
28-Sep-2017 14:13:51         at akka.actor.LightArrayRevolverScheduler$$anonfun$close$1.apply(Scheduler.scala:281)
28-Sep-2017 14:13:51         at akka.actor.LightArrayRevolverScheduler$$anonfun$close$1.apply(Scheduler.scala:280)
28-Sep-2017 14:13:51         at scala.collection.Iterator$class.foreach(Iterator.scala:727)
28-Sep-2017 14:13:51         at scala.collection.AbstractIterator.foreach(Iterator.scala:1157)
28-Sep-2017 14:13:51         at scala.collection.IterableLike$class.foreach(IterableLike.scala:72)
28-Sep-2017 14:13:51         at scala.collection.AbstractIterable.foreach(Iterable.scala:54)
28-Sep-2017 14:13:51         at akka.actor.LightArrayRevolverScheduler.close(Scheduler.scala:279)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl.stopScheduler(ActorSystem.scala:630)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl$$anonfun$_start$1.apply$mcV$sp(ActorSystem.scala:582)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl$$anonfun$_start$1.apply(ActorSystem.scala:582)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl$$anonfun$_start$1.apply(ActorSystem.scala:582)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl$$anon$3.run(ActorSystem.scala:596)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl$TerminationCallbacks$$anonfun$run$1.runNext$1(ActorSystem.scala:750)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl$TerminationCallbacks$$anonfun$run$1.apply$mcV$sp(ActorSystem.scala:753)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl$TerminationCallbacks$$anonfun$run$1.apply(ActorSystem.scala:746)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl$TerminationCallbacks$$anonfun$run$1.apply(ActorSystem.scala:746)
28-Sep-2017 14:13:51         at akka.util.ReentrantGuard.withGuard(LockUtil.scala:15)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl$TerminationCallbacks.run(ActorSystem.scala:746)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl$$anonfun$terminationCallbacks$1.apply(ActorSystem.scala:593)
28-Sep-2017 14:13:51         at akka.actor.ActorSystemImpl$$anonfun$terminationCallbacks$1.apply(ActorSystem.scala:593)
28-Sep-2017 14:13:51         at scala.concurrent.impl.CallbackRunnable.run(Promise.scala:32)
28-Sep-2017 14:13:51         at akka.dispatch.BatchingExecutor$Batch$$anonfun$run$1.processBatch$1(BatchingExecutor.scala:67)
28-Sep-2017 14:13:51         at akka.dispatch.BatchingExecutor$Batch$$anonfun$run$1.apply$mcV$sp(BatchingExecutor.scala:82)
28-Sep-2017 14:13:51         at akka.dispatch.BatchingExecutor$Batch$$anonfun$run$1.apply(BatchingExecutor.scala:59)
28-Sep-2017 14:13:51         at akka.dispatch.BatchingExecutor$Batch$$anonfun$run$1.apply(BatchingExecutor.scala:59)
28-Sep-2017 14:13:51         at scala.concurrent.BlockContext$.withBlockContext(BlockContext.scala:72)
28-Sep-2017 14:13:51         at akka.dispatch.BatchingExecutor$Batch.run(BatchingExecutor.scala:58)
28-Sep-2017 14:13:51         at akka.dispatch.TaskInvocation.run(AbstractDispatcher.scala:42)
28-Sep-2017 14:13:51         at akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:386)
28-Sep-2017 14:13:51         at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
28-Sep-2017 14:13:51         at scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
28-Sep-2017 14:13:51         at scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
28-Sep-2017 14:13:51         at scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
28-Sep-2017 14:13:51
28-Sep-2017 14:13:51 [info] ScalaTest
28-Sep-2017 14:13:51 [info] Run completed in 9 seconds, 69 milliseconds.
28-Sep-2017 14:13:51 [info] Total number of tests run: 83
28-Sep-2017 14:13:51 [info] Suites: completed 7, aborted 0
28-Sep-2017 14:13:51 [info] Tests: succeeded 83, failed 0, canceled 0, ignored 0, pending 0
28-Sep-2017 14:13:51 [info] All tests passed.
28-Sep-2017 14:13:51 [info] Passed: Total 6, Failed 0, Errors 0, Passed 6
28-Sep-2017 14:13:51 [success] Total time: 28 s, completed Sep 28, 2017 2:13:51 PM
28-Sep-2017 14:13:51 Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1...
28-Sep-2017 14:13:51 Finished task 'test' with result: Success
28-Sep-2017 14:13:51
Substituting variable: ${bamboo.buildNumber} with 17
28-Sep-2017 14:13:51 Starting task 'doc' of type 'com.atlassian.bamboo.plugins.sbt:sbt'
28-Sep-2017 14:13:51
Beginning to execute external process for build 'Clowder - CORE - feature-CATS-760-update-advanced-search-feature-to - default #17 (CATS-CORE788-JOB1-17)'
... running command line:
/home/bamboo/sbt-0.13.13/bin/sbt doc
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
... using extra environment variables:
bamboo_planRepository_1_branch=feature/CATS-760-update-advanced-search-feature-to
bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node
bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm
bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster
bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_planRepository_1_branchDisplayName=feature/CATS-760-update-advanced-search-feature-to
bamboo_repository_revision_number=680449da5135b4c0b64dc3fc48f0967747eddbd1
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE788-JOB1-17
bamboo_repository_143851660_branch_name=feature/CATS-760-update-advanced-search-feature-to
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_15=/bin/sh /home/bamboo/bamboo-agent-home/temp/CATS-CORE788-JOB1-17-ScriptBuildTask-1674279063046449875.sh
JAVA_OPTS=-Dbamboo.buildNumber=17
bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build
bamboo_planRepository_1_name=clowder
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
bamboo_buildKey=CATS-CORE788-JOB1
bamboo_capability_system_os=linux
bamboo_shortPlanName=feature-CATS-760-update-advanced-search-feature-to
bamboo_planRepository_name=clowder
bamboo_buildNumber=17
bamboo_shortJobName=default
bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-CORE788-JOB1-17
bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_build_commandline_com_atlassian_bamboo_plugins_sbt_sbt_18=/home/bamboo/sbt-0.13.13/bin/sbt compile
bamboo_build_commandline_com_atlassian_bamboo_plugins_sbt_sbt_19=/home/bamboo/sbt-0.13.13/bin/sbt test-only integration.APITestSuite
bamboo_build_commandline_com_atlassian_bamboo_plugins_sbt_sbt_17=/home/bamboo/sbt-0.13.13/bin/sbt clean update
bamboo_agentId=143032321
bamboo_planName=Clowder - CORE - feature-CATS-760-update-advanced-search-feature-to
bamboo_shortPlanKey=CORE788
bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
bamboo_repository_143851660_name=clowder
bamboo_repository_143851660_previous_revision_number=5d0c6e50af37e280ef56b86a33536ba210731d89
bamboo_shortJobKey=JOB1
bamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node
bamboo_repository_143851660_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_planRepository_revision=680449da5135b4c0b64dc3fc48f0967747eddbd1
bamboo_repository_previous_revision_number=5d0c6e50af37e280ef56b86a33536ba210731d89
bamboo_buildTimeStamp=2017-09-28T14:11:27.376-05:00
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
bamboo_planRepository_previousRevision=5d0c6e50af37e280ef56b86a33536ba210731d89
bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
bamboo_buildResultKey=CATS-CORE788-JOB1-17
bamboo_repository_git_branch=feature/CATS-760-update-advanced-search-feature-to
bamboo_repository_branch_name=feature/CATS-760-update-advanced-search-feature-to
bamboo_buildPlanName=Clowder - CORE - feature-CATS-760-update-advanced-search-feature-to - default
bamboo_planRepository_1_revision=680449da5135b4c0b64dc3fc48f0967747eddbd1
bamboo_repository_143851660_git_username=
bamboo_capability_system_builder_command_python3=/usr/bin/python3
bamboo_repository_name=clowder
JAVA_HOME=/home/bamboo/jdk1.8.0_66
bamboo_buildFailed=false
bamboo_capability_system_docker_executable=/usr/bin/docker
bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt
bamboo_planRepository_branch=feature/CATS-760-update-advanced-search-feature-to
bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir
bamboo_capability_system_git_executable=/usr/bin/git
bamboo_planRepository_1_previousRevision=5d0c6e50af37e280ef56b86a33536ba210731d89
bamboo_repository_git_username=
bamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13
bamboo_planRepository_branchDisplayName=feature/CATS-760-update-advanced-search-feature-to
bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs
bamboo_planRepository_1_type=bbserver
bamboo_planRepository_branchName=feature/CATS-760-update-advanced-search-feature-to
bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7
bamboo_capability_system_hostname=buildserver-1
bamboo_repository_143851660_revision_number=680449da5135b4c0b64dc3fc48f0967747eddbd1
bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_software_mongo=/usr/bin/mongo
bamboo_plan_storageTag=plan-143655191
SBT_HOME=/home/bamboo/sbt-0.13.13
bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl
bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs
bamboo_planRepository_type=bbserver
bamboo_planRepository_1_username=
bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66
bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node
bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4
bamboo_repository_143851660_git_branch=feature/CATS-760-update-advanced-search-feature-to
bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9
bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1
bamboo_planKey=CATS-CORE788
bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/clowder.git
bamboo_planRepository_username=
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_planRepository_1_branchName=feature/CATS-760-update-advanced-search-feature-to
PATH=/home/bamboo/jdk1.8.0_66/bin:/home/bamboo/jdk1.8.0_66/bin:/home/bamboo/node-v0.10.28/bin:/usr/bin:/bin
28-Sep-2017 14:13:53 [info] Loading project definition from /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/project
28-Sep-2017 14:13:54 [info] Set current project to clowder (in build file:/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/)
28-Sep-2017 14:13:54 [info] Main Scala API documentation to /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/target/scala-2.10/api...
28-Sep-2017 14:14:04 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/Global.scala:60: postfix operator minutes should be enabled
28-Sep-2017 14:14:04 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:04 [warn] This can be achieved by adding the import clause 'import scala.language.postfixOps'
28-Sep-2017 14:14:04 [warn] or by setting the compiler option -language:postfixOps.
28-Sep-2017 14:14:04 [warn] See the Scala docs for value scala.language.postfixOps for a discussion
28-Sep-2017 14:14:04 [warn] why the feature should be explicitly enabled.
28-Sep-2017 14:14:04 [warn]       extractorTimer = Akka.system().scheduler.schedule(0 minutes, 5 minutes) {
28-Sep-2017 14:14:04 [warn]                                                           ^
28-Sep-2017 14:14:04 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/Global.scala:60: postfix operator minutes should be enabled
28-Sep-2017 14:14:04 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:04 [warn]       extractorTimer = Akka.system().scheduler.schedule(0 minutes, 5 minutes) {
28-Sep-2017 14:14:04 [warn]                                                                      ^
28-Sep-2017 14:14:04 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/Global.scala:66: postfix operator minutes should be enabled
28-Sep-2017 14:14:04 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:04 [warn]       jobTimer = Akka.system().scheduler.schedule(0 minutes, 1 minutes) {
28-Sep-2017 14:14:04 [warn]                                                     ^
28-Sep-2017 14:14:04 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/Global.scala:66: postfix operator minutes should be enabled
28-Sep-2017 14:14:04 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:04 [warn]       jobTimer = Akka.system().scheduler.schedule(0 minutes, 1 minutes) {
28-Sep-2017 14:14:04 [warn]                                                                ^
28-Sep-2017 14:14:04 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/Global.scala:79: postfix operator seconds should be enabled
28-Sep-2017 14:14:04 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:04 [warn]         Akka.system().scheduler.scheduleOnce(10 seconds) {
28-Sep-2017 14:14:04 [warn]                                                 ^
28-Sep-2017 14:14:05 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Admin.scala:179: postfix operator seconds should be enabled
28-Sep-2017 14:14:05 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:05 [warn]     Akka.system.scheduler.scheduleOnce(1 seconds) {
28-Sep-2017 14:14:05 [warn]                                          ^
28-Sep-2017 14:14:06 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Collections.scala:567: a pure expression does nothing in statement position; you may be omitting necessary parentheses
28-Sep-2017 14:14:06 [warn]           return true
28-Sep-2017 14:14:06 [warn]                  ^
28-Sep-2017 14:14:06 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Collections.scala:567: enclosing method isCollectionRootOrHasNoParent has result type Unit: return value discarded
28-Sep-2017 14:14:06 [warn]           return true
28-Sep-2017 14:14:06 [warn]           ^
28-Sep-2017 14:14:06 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Collections.scala:569: a pure expression does nothing in statement position; you may be omitting necessary parentheses
28-Sep-2017 14:14:06 [warn]           return false
28-Sep-2017 14:14:06 [warn]                  ^
28-Sep-2017 14:14:06 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Collections.scala:569: enclosing method isCollectionRootOrHasNoParent has result type Unit: return value discarded
28-Sep-2017 14:14:06 [warn]           return false
28-Sep-2017 14:14:06 [warn]           ^
28-Sep-2017 14:14:07 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/CurationObjects.scala:122: postfix operator toList should be enabled
28-Sep-2017 14:14:07 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:07 [warn]             metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
28-Sep-2017 14:14:07 [warn]                                                                                                                                ^
28-Sep-2017 14:14:08 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Extractions.scala:14: imported `Files' is permanently hidden by definition of class Files in package api
28-Sep-2017 14:14:08 [warn] import play.api.libs.{Files, MimeTypes}
28-Sep-2017 14:14:08 [warn]                       ^
28-Sep-2017 14:14:09 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Files.scala:440: @deprecated now takes two arguments; see the scaladoc.
28-Sep-2017 14:14:09 [warn]   @deprecated
28-Sep-2017 14:14:09 [warn]    ^
28-Sep-2017 14:14:11 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Geostreams.scala:46: postfix operator tupled should be enabled
28-Sep-2017 14:14:11 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:11 [warn]   ) tupled
28-Sep-2017 14:14:11 [warn]     ^
28-Sep-2017 14:14:11 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Geostreams.scala:54: postfix operator tupled should be enabled
28-Sep-2017 14:14:11 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:11 [warn]   ) tupled
28-Sep-2017 14:14:11 [warn]     ^
28-Sep-2017 14:14:11 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Geostreams.scala:63: postfix operator tupled should be enabled
28-Sep-2017 14:14:11 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:11 [warn]   ) tupled
28-Sep-2017 14:14:11 [warn]     ^
28-Sep-2017 14:14:11 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Geostreams.scala:70: postfix operator tupled should be enabled
28-Sep-2017 14:14:11 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:11 [warn]     ) tupled
28-Sep-2017 14:14:11 [warn]       ^
28-Sep-2017 14:14:11 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Geostreams.scala:78: postfix operator tupled should be enabled
28-Sep-2017 14:14:11 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:11 [warn]     ) tupled
28-Sep-2017 14:14:11 [warn]       ^
28-Sep-2017 14:14:11 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/api/Geostreams.scala:87: postfix operator tupled should be enabled
28-Sep-2017 14:14:11 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:11 [warn]     ) tupled
28-Sep-2017 14:14:11 [warn]       ^
28-Sep-2017 14:14:11 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBInstitutionService.scala:3: imported `Institution' is permanently hidden by definition of object Institution in package mongodb
28-Sep-2017 14:14:11 [warn] import models.Institution
28-Sep-2017 14:14:11 [warn]               ^
28-Sep-2017 14:14:11 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBProjectService.scala:3: imported `Project' is permanently hidden by definition of object Project in package mongodb
28-Sep-2017 14:14:11 [warn] import models.Project
28-Sep-2017 14:14:11 [warn]               ^
28-Sep-2017 14:14:13 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/controllers/CurationObjects.scala:14: imported `Files' is permanently hidden by definition of class Files in package controllers
28-Sep-2017 14:14:13 [warn] import play.api.libs.Files
28-Sep-2017 14:14:13 [warn]                      ^
28-Sep-2017 14:14:14 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/controllers/CurationObjects.scala:493: postfix operator toList should be enabled
28-Sep-2017 14:14:14 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:14 [warn]       metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
28-Sep-2017 14:14:14 [warn]                                                                                                                          ^
28-Sep-2017 14:14:14 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/controllers/CurationObjects.scala:723: postfix operator toList should be enabled
28-Sep-2017 14:14:14 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:14 [warn]             metadataJson = metadataJson ++ Map(key -> Json.toJson(metadataList.filter(_.label == key).map{item => item.content}toList))
28-Sep-2017 14:14:14 [warn]                                                                                                                                ^
28-Sep-2017 14:14:14 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/controllers/Registration.scala:13: imported `Registration' is permanently hidden by definition of class Registration in package controllers
28-Sep-2017 14:14:14 [warn] import securesocial.controllers.{ProviderController, Registration, TemplatesPlugin}
28-Sep-2017 14:14:14 [warn]                                                      ^
28-Sep-2017 14:14:15 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/controllers/Registration.scala:57: reflective access of structural type member value currentHasher should be enabled
28-Sep-2017 14:14:15 [warn] by making the implicit value scala.language.reflectiveCalls visible.
28-Sep-2017 14:14:15 [warn] This can be achieved by adding the import clause 'import scala.language.reflectiveCalls'
28-Sep-2017 14:14:15 [warn] or by setting the compiler option -language:reflectiveCalls.
28-Sep-2017 14:14:15 [warn] See the Scala docs for value scala.language.reflectiveCalls for a discussion
28-Sep-2017 14:14:15 [warn] why the feature should be explicitly enabled.
28-Sep-2017 14:14:15 [warn]                 passwordInfo = Some(Registry.hashers.currentHasher.hash(info.password))
28-Sep-2017 14:14:15 [warn]                                                      ^
28-Sep-2017 14:14:15 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/controllers/Spaces.scala:279: postfix operator toMap should be enabled
28-Sep-2017 14:14:15 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:15 [warn]         val roleDescription = users.listRoles() map (t => t.name -> t.description) toMap
28-Sep-2017 14:14:15 [warn]                                                                                    ^
28-Sep-2017 14:14:15 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/models/Comment.scala:25: implicit conversion method toElasticsearchComment should be enabled
28-Sep-2017 14:14:15 [warn] by making the implicit value scala.language.implicitConversions visible.
28-Sep-2017 14:14:15 [warn] This can be achieved by adding the import clause 'import scala.language.implicitConversions'
28-Sep-2017 14:14:15 [warn] or by setting the compiler option -language:implicitConversions.
28-Sep-2017 14:14:15 [warn] See the Scala docs for value scala.language.implicitConversions for a discussion
28-Sep-2017 14:14:15 [warn] why the feature should be explicitly enabled.
28-Sep-2017 14:14:15 [warn]   implicit def toElasticsearchComment(c: Comment): ElasticsearchComment = {
28-Sep-2017 14:14:15 [warn]                ^
28-Sep-2017 14:14:16 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/models/Tag.scala:17: implicit conversion method toElasticsearchTag should be enabled
28-Sep-2017 14:14:16 [warn] by making the implicit value scala.language.implicitConversions visible.
28-Sep-2017 14:14:16 [warn]   implicit def toElasticsearchTag(t: Tag): ElasticsearchTag = {
28-Sep-2017 14:14:16 [warn]                ^
28-Sep-2017 14:14:16 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/models/UUID.scala:36: implicit conversion method stringToUUID should be enabled
28-Sep-2017 14:14:16 [warn] by making the implicit value scala.language.implicitConversions visible.
28-Sep-2017 14:14:16 [warn]   implicit def stringToUUID(s: String) = UUID(s)
28-Sep-2017 14:14:16 [warn]                ^
28-Sep-2017 14:14:16 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/models/UUID.scala:37: implicit conversion method uuidToObjectId should be enabled
28-Sep-2017 14:14:16 [warn] by making the implicit value scala.language.implicitConversions visible.
28-Sep-2017 14:14:16 [warn]   implicit def uuidToObjectId(uuid: UUID) = new ObjectId(uuid.stringify)
28-Sep-2017 14:14:16 [warn]                ^
28-Sep-2017 14:14:16 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/models/UUID.scala:38: implicit conversion method objectIdToUUID should be enabled
28-Sep-2017 14:14:16 [warn] by making the implicit value scala.language.implicitConversions visible.
28-Sep-2017 14:14:16 [warn]   implicit def objectIdToUUID(objectId: ObjectId) = UUID(objectId.toString)
28-Sep-2017 14:14:16 [warn]                ^
28-Sep-2017 14:14:16 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/models/User.scala:101: implicit conversion method userToMiniUser should be enabled
28-Sep-2017 14:14:16 [warn] by making the implicit value scala.language.implicitConversions visible.
28-Sep-2017 14:14:16 [warn]   implicit def userToMiniUser(x: User): MiniUser = x.getMiniUser
28-Sep-2017 14:14:16 [warn]                ^
28-Sep-2017 14:14:16 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/ElasticsearchPlugin.scala:583: a pure expression does nothing in statement position; you may be omitting necessary parentheses
28-Sep-2017 14:14:16 [warn]     """dynamic_templates": [
28-Sep-2017 14:14:16 [warn]     ^
28-Sep-2017 14:14:17 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/PolyglotPlugin.scala:83: postfix operator seconds should be enabled
28-Sep-2017 14:14:17 [warn] by making the implicit value scala.language.postfixOps visible.
28-Sep-2017 14:14:17 [warn]           akka.pattern.after(3 seconds, using = Akka.system.scheduler)(checkForFileAndDownload((triesLeft - 1), url, outputStream))
28-Sep-2017 14:14:17 [warn]                                ^
28-Sep-2017 14:14:17 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoContext.scala:253: implicit conversion method dbObjectToString should be enabled
28-Sep-2017 14:14:17 [warn] by making the implicit value scala.language.implicitConversions visible.
28-Sep-2017 14:14:17 [warn]   implicit def dbObjectToString(dbObject: DBObject): String = {
28-Sep-2017 14:14:17 [warn]                ^
28-Sep-2017 14:14:18 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBCommentService.scala:3: imported `Comment' is permanently hidden by definition of object Comment in package mongodb
28-Sep-2017 14:14:18 [warn] import models.{UUID, Comment}
28-Sep-2017 14:14:18 [warn]                      ^
28-Sep-2017 14:14:19 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBTagService.scala:7: imported `Tag' is permanently hidden by definition of object Tag in package mongodb
28-Sep-2017 14:14:19 [warn] import models.{Tag, UUID}
28-Sep-2017 14:14:19 [warn]                ^
28-Sep-2017 14:14:19 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBExtractionRequestsService.scala:20: imported `MongoSalatPlugin' is permanently hidden by definition of class MongoSalatPlugin in package mongodb
28-Sep-2017 14:14:19 [warn] import services.mongodb.MongoSalatPlugin
28-Sep-2017 14:14:19 [warn]                         ^
28-Sep-2017 14:14:19 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBExtractionService.scala:4: imported `Extraction' is permanently hidden by definition of object Extraction in package mongodb
28-Sep-2017 14:14:19 [warn] import models.{UUID, Extraction}
28-Sep-2017 14:14:19 [warn]                      ^
28-Sep-2017 14:14:19 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBExtractionService.scala:13: imported `WebPageResource' is permanently hidden by definition of object WebPageResource in package mongodb
28-Sep-2017 14:14:19 [warn] import models.WebPageResource
28-Sep-2017 14:14:19 [warn]               ^
28-Sep-2017 14:14:20 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBSectionService.scala:5: imported `Tag' is permanently hidden by definition of object Tag in package mongodb
28-Sep-2017 14:14:20 [warn] import models.{UUID, Tag, Comment, Section, User}
28-Sep-2017 14:14:20 [warn]                      ^
28-Sep-2017 14:14:20 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBSectionService.scala:5: imported `Comment' is permanently hidden by definition of object Comment in package mongodb
28-Sep-2017 14:14:20 [warn] import models.{UUID, Tag, Comment, Section, User}
28-Sep-2017 14:14:20 [warn]                           ^
28-Sep-2017 14:14:20 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBSelectionService.scala:11: imported `Dataset' is permanently hidden by definition of object Dataset in package mongodb
28-Sep-2017 14:14:20 [warn] import models.{UUID, Dataset, Selected}
28-Sep-2017 14:14:20 [warn]                      ^
28-Sep-2017 14:14:20 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBSpaceService.scala:19: imported `Collection' is permanently hidden by definition of object Collection in package mongodb
28-Sep-2017 14:14:20 [warn] import models.Collection
28-Sep-2017 14:14:20 [warn]               ^
28-Sep-2017 14:14:20 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/mongodb/MongoDBSpaceService.scala:20: imported `Dataset' is permanently hidden by definition of object Dataset in package mongodb
28-Sep-2017 14:14:20 [warn] import models.Dataset
28-Sep-2017 14:14:20 [warn]               ^
28-Sep-2017 14:14:22 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/util/SearchUtils.scala:115: This catches all Throwables. If this is really intended, use `case _ : Throwable` to clear this warning.
28-Sep-2017 14:14:22 [warn]             case _ => {
28-Sep-2017 14:14:22 [warn]                  ^
28-Sep-2017 14:14:30 model contains 898 documentable templates
28-Sep-2017 14:14:33 [warn] /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/app/services/irods/IRODSPlugin.scala:9: Tag '@date' is not recognised
28-Sep-2017 14:14:33 [warn] /**
28-Sep-2017 14:14:33 [warn] ^
28-Sep-2017 14:14:39 [warn] 48 warnings found
28-Sep-2017 14:14:39 [info] Main Scala API documentation successful.
28-Sep-2017 14:14:39 [success] Total time: 45 s, completed Sep 28, 2017 2:14:39 PM
28-Sep-2017 14:14:39 Finished task 'doc' with result: Success
28-Sep-2017 14:14:39 Skipping execution of task 'sphinx' as it is disabled
28-Sep-2017 14:14:39 Starting task 'sphinx' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
28-Sep-2017 14:14:39
Beginning to execute external process for build 'Clowder - CORE - feature-CATS-760-update-advanced-search-feature-to - default #17 (CATS-CORE788-JOB1-17)'
... running command line:
/home/bamboo/bamboo-agent-home/temp/CATS-CORE788-JOB1-17-ScriptBuildTask-1901384371915397973.sh
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx
... using extra environment variables:
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bamboo_repository_revision_number=680449da5135b4c0b64dc3fc48f0967747eddbd1
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bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_15=/bin/sh /home/bamboo/bamboo-agent-home/temp/CATS-CORE788-JOB1-17-ScriptBuildTask-1674279063046449875.sh
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bamboo_build_commandline_com_atlassian_bamboo_plugins_sbt_sbt_17=/home/bamboo/sbt-0.13.13/bin/sbt clean update
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bamboo_build_commandline_com_atlassian_bamboo_plugins_sbt_sbt_20=/home/bamboo/sbt-0.13.13/bin/sbt doc
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28-Sep-2017 14:14:39 New python executable in /tmp/virtualenv/clowder-sphinx/bin/python2
28-Sep-2017 14:14:39 Also creating executable in /tmp/virtualenv/clowder-sphinx/bin/python
28-Sep-2017 14:14:41 Installing setuptools, pkg_resources, pip, wheel...done.
28-Sep-2017 14:14:41 Running virtualenv with interpreter /usr/bin/python2
28-Sep-2017 14:14:41 Collecting Sphinx
28-Sep-2017 14:14:41   Using cached Sphinx-1.6.4-py2.py3-none-any.whl
28-Sep-2017 14:14:42 Collecting sphinxcontrib-websupport (from Sphinx)
28-Sep-2017 14:14:42   Using cached sphinxcontrib_websupport-1.0.1-py2.py3-none-any.whl
28-Sep-2017 14:14:42 Collecting six>=1.5 (from Sphinx)
28-Sep-2017 14:14:42   Using cached six-1.11.0-py2.py3-none-any.whl
28-Sep-2017 14:14:42 Collecting requests>=2.0.0 (from Sphinx)
28-Sep-2017 14:14:42   Using cached requests-2.18.4-py2.py3-none-any.whl
28-Sep-2017 14:14:42 Collecting docutils>=0.11 (from Sphinx)
28-Sep-2017 14:14:42   Using cached docutils-0.14-py2-none-any.whl
28-Sep-2017 14:14:42 Collecting typing; python_version < "3.5" (from Sphinx)
28-Sep-2017 14:14:42   Using cached typing-3.6.2-py2-none-any.whl
28-Sep-2017 14:14:42 Collecting Pygments>=2.0 (from Sphinx)
28-Sep-2017 14:14:42   Using cached Pygments-2.2.0-py2.py3-none-any.whl
28-Sep-2017 14:14:42 Requirement already satisfied: setuptools in /tmp/virtualenv/clowder-sphinx/lib/python2.7/site-packages (from Sphinx)
28-Sep-2017 14:14:42 Collecting imagesize (from Sphinx)
28-Sep-2017 14:14:42   Using cached imagesize-0.7.1-py2.py3-none-any.whl
28-Sep-2017 14:14:42 Collecting babel!=2.0,>=1.3 (from Sphinx)
28-Sep-2017 14:14:42   Using cached Babel-2.5.1-py2.py3-none-any.whl
28-Sep-2017 14:14:43 Collecting snowballstemmer>=1.1 (from Sphinx)
28-Sep-2017 14:14:43   Using cached snowballstemmer-1.2.1-py2.py3-none-any.whl
28-Sep-2017 14:14:43 Collecting Jinja2>=2.3 (from Sphinx)
28-Sep-2017 14:14:43   Using cached Jinja2-2.9.6-py2.py3-none-any.whl
28-Sep-2017 14:14:43 Collecting alabaster<0.8,>=0.7 (from Sphinx)
28-Sep-2017 14:14:43   Using cached alabaster-0.7.10-py2.py3-none-any.whl
28-Sep-2017 14:14:43 Collecting urllib3<1.23,>=1.21.1 (from requests>=2.0.0->Sphinx)
28-Sep-2017 14:14:43   Using cached urllib3-1.22-py2.py3-none-any.whl
28-Sep-2017 14:14:43 Collecting idna<2.7,>=2.5 (from requests>=2.0.0->Sphinx)
28-Sep-2017 14:14:43   Using cached idna-2.6-py2.py3-none-any.whl
28-Sep-2017 14:14:43 Collecting chardet<3.1.0,>=3.0.2 (from requests>=2.0.0->Sphinx)
28-Sep-2017 14:14:43   Using cached chardet-3.0.4-py2.py3-none-any.whl
28-Sep-2017 14:14:43 Collecting certifi>=2017.4.17 (from requests>=2.0.0->Sphinx)
28-Sep-2017 14:14:43   Using cached certifi-2017.7.27.1-py2.py3-none-any.whl
28-Sep-2017 14:14:43 Collecting pytz>=0a (from babel!=2.0,>=1.3->Sphinx)
28-Sep-2017 14:14:43   Using cached pytz-2017.2-py2.py3-none-any.whl
28-Sep-2017 14:14:44 Collecting MarkupSafe>=0.23 (from Jinja2>=2.3->Sphinx)
28-Sep-2017 14:14:44 Installing collected packages: sphinxcontrib-websupport, six, urllib3, idna, chardet, certifi, requests, docutils, typing, Pygments, imagesize, pytz, babel, snowballstemmer, MarkupSafe, Jinja2, alabaster, Sphinx
28-Sep-2017 14:14:45 Successfully installed Jinja2-2.9.6 MarkupSafe-1.0 Pygments-2.2.0 Sphinx-1.6.4 alabaster-0.7.10 babel-2.5.1 certifi-2017.7.27.1 chardet-3.0.4 docutils-0.14 idna-2.6 imagesize-0.7.1 pytz-2017.2 requests-2.18.4 six-1.11.0 snowballstemmer-1.2.1 sphinxcontrib-websupport-1.0.1 typing-3.6.2 urllib3-1.22
28-Sep-2017 14:14:46 sphinx-build -b html -d _build/doctrees   . _build/html
28-Sep-2017 14:14:46 Running Sphinx v1.6.4
28-Sep-2017 14:14:46 loading pickled environment... done
28-Sep-2017 14:14:46 building [mo]: targets for 0 po files that are out of date
28-Sep-2017 14:14:46 building [html]: targets for 12 source files that are out of date
28-Sep-2017 14:14:46 updating environment: 0 added, 0 changed, 0 removed
28-Sep-2017 14:14:46 looking for now-outdated files... none found
28-Sep-2017 14:14:46 preparing documents... done
28-Sep-2017 14:14:46 writing output... [  8%] api
28-Sep-2017 14:14:46 writing output... [ 16%] architecture
28-Sep-2017 14:14:46 writing output... [ 25%] extractors
28-Sep-2017 14:14:46 writing output... [ 33%] index
28-Sep-2017 14:14:46 writing output... [ 41%] installation
28-Sep-2017 14:14:46 writing output... [ 50%] license
28-Sep-2017 14:14:46 writing output... [ 58%] overview
28-Sep-2017 14:14:46 writing output... [ 66%] previewers
28-Sep-2017 14:14:46 writing output... [ 75%] setup
28-Sep-2017 14:14:46 writing output... [ 83%] setup_dev
28-Sep-2017 14:14:46 writing output... [ 91%] source
28-Sep-2017 14:14:46 writing output... [100%] thankyou
28-Sep-2017 14:14:46
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 generating indices... genindex
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'source' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/doc/src/sphinx/index.rst:36: WARNING: toctree contains reference to document u'setup' that doesn't have a title: no link will be generated
28-Sep-2017 14:14:46 writing additional pages... search
28-Sep-2017 14:14:46 copying images... [ 20%] _static/dataset.png
28-Sep-2017 14:14:46 copying images... [ 40%] _static/data-model.jpg
28-Sep-2017 14:14:46 copying images... [ 60%] _static/extraction.jpg
28-Sep-2017 14:14:46 copying images... [ 80%] _static/architecture.jpg
28-Sep-2017 14:14:46 copying images... [100%] _static/logo_full.png
28-Sep-2017 14:14:46
28-Sep-2017 14:14:46 copying static files... done
28-Sep-2017 14:14:46 copying extra files... done
28-Sep-2017 14:14:46 dumping search index in English (code: en) ... done
28-Sep-2017 14:14:46 dumping object inventory... done
28-Sep-2017 14:14:46 build succeeded, 30 warnings.
28-Sep-2017 14:14:46
28-Sep-2017 14:14:46 Build finished. The HTML pages are in _build/html.
28-Sep-2017 14:14:46 Finished task 'sphinx' with result: Success
28-Sep-2017 14:14:46
Substituting variable: ${bamboo.buildNumber} with 17
28-Sep-2017 14:14:46 Starting task 'dist' of type 'com.atlassian.bamboo.plugins.sbt:sbt'
28-Sep-2017 14:14:46
Beginning to execute external process for build 'Clowder - CORE - feature-CATS-760-update-advanced-search-feature-to - default #17 (CATS-CORE788-JOB1-17)'
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28-Sep-2017 14:14:48 [info] Loading project definition from /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/project
28-Sep-2017 14:14:49 [info] Set current project to clowder (in build file:/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/)
28-Sep-2017 14:14:49 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/target/scala-2.10/clowder_2.10-1.x-SNAPSHOT-sources.jar ...
28-Sep-2017 14:14:49 [info] Done packaging.
28-Sep-2017 14:14:49 [info] Wrote /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/target/scala-2.10/clowder_2.10-1.x-SNAPSHOT.pom
28-Sep-2017 14:14:50 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/target/scala-2.10/clowder_2.10-1.x-SNAPSHOT-javadoc.jar ...
28-Sep-2017 14:14:51 [info] Done packaging.
28-Sep-2017 14:14:51 [info] Packaging /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/target/scala-2.10/clowder_2.10-1.x-SNAPSHOT.jar ...
28-Sep-2017 14:14:53 [info] Done packaging.
28-Sep-2017 14:14:59 [info]
28-Sep-2017 14:14:59 [info] Your package is ready in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-CORE788-JOB1/target/universal/clowder-1.x-SNAPSHOT.zip
28-Sep-2017 14:14:59 [info]
28-Sep-2017 14:14:59 [success] Total time: 10 s, completed Sep 28, 2017 2:14:59 PM
28-Sep-2017 14:14:59 Finished task 'dist' with result: Success
28-Sep-2017 14:14:59 Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
28-Sep-2017 14:14:59
Beginning to execute external process for build 'Clowder - CORE - feature-CATS-760-update-advanced-search-feature-to - default #17 (CATS-CORE788-JOB1-17)'
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bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_planRepository_1_branchName=feature/CATS-760-update-advanced-search-feature-to
28-Sep-2017 14:15:00 Sending build context to Docker daemon 149.1 MB
28-Sep-2017 14:15:00
28-Sep-2017 14:15:00 Step 1/10 : FROM java:8-jre
28-Sep-2017 14:15:01 8-jre: Pulling from library/java
28-Sep-2017 14:15:01 Digest: sha256:b91008e234402fc87e7889d6af1f36b6ece844c05989236d83d1f658a6f329b0
28-Sep-2017 14:15:01 Status: Image is up to date for java:8-jre
28-Sep-2017 14:15:01 ---> e44d62cf8862
28-Sep-2017 14:15:01 Step 2/10 : MAINTAINER Rob Kooper <kooper@illinois.edu>
28-Sep-2017 14:15:01 ---> Using cache
28-Sep-2017 14:15:01 ---> 2ef8c867b2a5
28-Sep-2017 14:15:01 Step 3/10 : EXPOSE 9000
28-Sep-2017 14:15:01 ---> Using cache
28-Sep-2017 14:15:01 ---> 7575779c12a9
28-Sep-2017 14:15:01 Step 4/10 : ENV CLOWDER_CONTEXT "/" CLOWDER_ADMINS "" MONGO_URI "" SMTP_HOST "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_URI "" RABBITMQ_MGMT_PORT "" ELASTICSEARCH_SERVICE_CLUSTERNAME "clowder" ELASTICSEARCH_SERVICE_SERVER "" ELASTICSEARCH_SERVICE_PORT "" TOOLMANAGER_URI ""
28-Sep-2017 14:15:01 ---> Using cache
28-Sep-2017 14:15:01 ---> f7580b143e2b
28-Sep-2017 14:15:01 Step 5/10 : RUN useradd -s /bin/bash clowder
28-Sep-2017 14:15:01 ---> Using cache
28-Sep-2017 14:15:01 ---> c7ef95d31253
28-Sep-2017 14:15:01 Step 6/10 : COPY files entrypoint.sh /home/clowder/
28-Sep-2017 14:15:24 ---> 2dd51b828fb2
28-Sep-2017 14:15:30 Removing intermediate container 4acbfc33b1a0
28-Sep-2017 14:15:30 Step 7/10 : RUN mkdir -p /home/clowder/clowder/custom /home/clowder/clowder/logs     && chown clowder /home/clowder/clowder /home/clowder/clowder/custom /home/clowder/clowder/logs
28-Sep-2017 14:15:30 ---> Running in c059c5aa575f
28-Sep-2017 14:15:31 ---> f24f6dfcaa29
28-Sep-2017 14:15:31 Removing intermediate container c059c5aa575f
28-Sep-2017 14:15:31 Step 8/10 : ENTRYPOINT /home/clowder/entrypoint.sh
28-Sep-2017 14:15:31 ---> Running in 6ab6338d6f96
28-Sep-2017 14:15:31 ---> 9fed1741c16a
28-Sep-2017 14:15:32 Removing intermediate container 6ab6338d6f96
28-Sep-2017 14:15:32 Step 9/10 : CMD server
28-Sep-2017 14:15:32 ---> Running in 2054540dc983
28-Sep-2017 14:15:32 ---> 00ec2a510491
28-Sep-2017 14:15:32 Removing intermediate container 2054540dc983
28-Sep-2017 14:15:32 Step 10/10 : USER clowder
28-Sep-2017 14:15:32 ---> Running in c99da5ce16f8
28-Sep-2017 14:15:32 ---> 1c1de21395a8
28-Sep-2017 14:15:32 Removing intermediate container c99da5ce16f8
28-Sep-2017 14:15:32 Successfully built 1c1de21395a8
28-Sep-2017 14:15:32 Sending build context to Docker daemon 22.02 kB
28-Sep-2017 14:15:32
28-Sep-2017 14:15:32 Step 1/5 : FROM ubuntu
28-Sep-2017 14:15:33 latest: Pulling from library/ubuntu
28-Sep-2017 14:15:33 Digest: sha256:d45655633486615d164808b724b29406cb88e23d9c40ac3aaaa2d69e79e3bd5d
28-Sep-2017 14:15:33 Status: Image is up to date for ubuntu:latest
28-Sep-2017 14:15:33 ---> 2d696327ab2e
28-Sep-2017 14:15:33 Step 2/5 : RUN apt-get -y update     && apt-get -y install curl unzip docker.io python python-dev python-pip     && pip install flask-restful     && pip install arrow     && apt-get clean all     && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*     ;
28-Sep-2017 14:15:33 ---> Using cache
28-Sep-2017 14:15:33 ---> 358da261a6a4
28-Sep-2017 14:15:33 Step 3/5 : COPY FILES.toolserver /
28-Sep-2017 14:15:33 ---> Using cache
28-Sep-2017 14:15:33 ---> 0ce52227e806
28-Sep-2017 14:15:33 Step 4/5 : ENV TOOLSERVER_PORT 8082
28-Sep-2017 14:15:33 ---> Using cache
28-Sep-2017 14:15:33 ---> b336d96f5e00
28-Sep-2017 14:15:33 Step 5/5 : CMD /usr/local/bin/usage
28-Sep-2017 14:15:33 ---> Using cache
28-Sep-2017 14:15:33 ---> d1e6eb53a4eb
28-Sep-2017 14:15:33 Successfully built d1e6eb53a4eb
28-Sep-2017 14:15:33 Sending build context to Docker daemon 9.728 kB
28-Sep-2017 14:15:33
28-Sep-2017 14:15:33 Step 1/6 : FROM ubuntu:16.04
28-Sep-2017 14:15:33 16.04: Pulling from library/ubuntu
28-Sep-2017 14:15:33 Digest: sha256:d45655633486615d164808b724b29406cb88e23d9c40ac3aaaa2d69e79e3bd5d
28-Sep-2017 14:15:33 Status: Image is up to date for ubuntu:16.04
28-Sep-2017 14:15:33 ---> 2d696327ab2e
28-Sep-2017 14:15:33 Step 2/6 : MAINTAINER Bing Zhang <bing@illinois.edu>
28-Sep-2017 14:15:33 ---> Using cache
28-Sep-2017 14:15:33 ---> e619f451b215
28-Sep-2017 14:15:33 Step 3/6 : ENV EMAIL_ADDRESS "" FIRST_NAME "" LAST_NAME "" PASSWORD "" MONGO_URI ""
28-Sep-2017 14:15:33 ---> Using cache
28-Sep-2017 14:15:33 ---> a58284d6857a
28-Sep-2017 14:15:33 Step 4/6 : RUN mkdir -p /data/db &&     apt-get update &&     apt-get install -y lsb-release &&     apt-key adv --keyserver hkp://keyserver.ubuntu.com:80 --recv EA312927 &&     echo "deb http://repo.mongodb.org/apt/ubuntu "$(lsb_release -sc)"/mongodb-org/3.2 multiverse" | tee /etc/apt/sources.list.d/mongodb-org-3.2.list &&     apt-get update && apt-get install -y     mongodb-org     net-tools iproute     python3 python3-pip &&     pip3 install passlib bcrypt
28-Sep-2017 14:15:33 ---> Using cache
28-Sep-2017 14:15:33 ---> 50f5117cab48
28-Sep-2017 14:15:33 Step 5/6 : COPY FILES.mongo-init /
28-Sep-2017 14:15:33 ---> Using cache
28-Sep-2017 14:15:33 ---> de05f18cf4f5
28-Sep-2017 14:15:33 Step 6/6 : ENTRYPOINT /usr/local/bin/entrypoint.sh
28-Sep-2017 14:15:33 ---> Using cache
28-Sep-2017 14:15:33 ---> 65af587a7bd9
28-Sep-2017 14:15:33 Successfully built 65af587a7bd9
28-Sep-2017 14:15:34 Tagged clowder toolserver with local
28-Sep-2017 14:15:34 Tagged clowder mongo-init with local
28-Sep-2017 14:15:34 Untagged: toolserver-613:latest
28-Sep-2017 14:15:34 Untagged: clowder-613:latest
28-Sep-2017 14:15:34 Untagged: mongo-init-613:latest
28-Sep-2017 14:15:34 Finished task 'docker build' with result: Success
28-Sep-2017 14:15:34 Running post build plugin 'Docker Container Cleanup'
28-Sep-2017 14:15:34 Running post build plugin 'NCover Results Collector'
28-Sep-2017 14:15:34 Running post build plugin 'Clover Results Collector'
28-Sep-2017 14:15:34 Running post build plugin 'npm Cache Cleanup'
28-Sep-2017 14:15:34 Running post build plugin 'Artifact Copier'
28-Sep-2017 14:15:34 Publishing an artifact: dist
28-Sep-2017 14:15:41 Finished publishing of artifact Shared artifact: [dist], pattern: [clowder-*.zip] anchored at: [target/universal] in 7.516 s
28-Sep-2017 14:15:41 Publishing an artifact: scaladoc
28-Sep-2017 14:15:43 Finished publishing of artifact Shared artifact: [scaladoc], pattern: [**/*] anchored at: [target/scala-2.10/api] in 1.673 s
28-Sep-2017 14:15:43 Publishing an artifact: manual
28-Sep-2017 14:15:43 Finished publishing of artifact Shared artifact: [manual], pattern: [**/*] anchored at: [doc/src/sphinx/_build/html] in 475.9 ms
28-Sep-2017 14:15:43 Finalising the build...
28-Sep-2017 14:15:43 Stopping timer.
28-Sep-2017 14:15:43 Build CATS-CORE788-JOB1-17 completed.
28-Sep-2017 14:15:43 Running on server: post build plugin 'NCover Results Collector'
28-Sep-2017 14:15:43 Running on server: post build plugin 'Build Hanging Detection Configuration'
28-Sep-2017 14:15:43 Running on server: post build plugin 'Clover Delta Calculator'
28-Sep-2017 14:15:43 Running on server: post build plugin 'Maven Dependencies Postprocessor'
28-Sep-2017 14:15:43 All post build plugins have finished
28-Sep-2017 14:15:43 Generating build results summary...
28-Sep-2017 14:15:44 Saving build results to disk...
28-Sep-2017 14:15:44 Logging substituted variables...
28-Sep-2017 14:15:44 Indexing build results...
28-Sep-2017 14:15:44 Finished building CATS-CORE788-JOB1-17.