Build: #36 failed
Job: Default Job failed
Build log
The build generated 570 lines of output. Download or view full build log.
| 09-Jul-2018 11:38:07 | Build Clowder - extractors-dbpedia - Default Job #36 (CATS-EXDBP-JOB1-36) started building on agent buildserver-1.os.ncsa.edu |
| 09-Jul-2018 11:38:07 | Remote agent on host buildserver-1.os.ncsa.edu |
| 09-Jul-2018 11:38:07 | Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1 |
| 09-Jul-2018 11:38:07 | Executing build Clowder - extractors-dbpedia - Default Job #36 (CATS-EXDBP-JOB1-36) |
| 09-Jul-2018 11:38:07 | Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' |
| 09-Jul-2018 11:38:07 | Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1 |
| 09-Jul-2018 11:38:07 | Updating source code to revision: 41c21decd56c8a967bf1fdb5d4d284f6b3b0de41 |
| 09-Jul-2018 11:38:08 | Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1/.git'. |
| 09-Jul-2018 11:38:08 | Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1/.git/ |
| 09-Jul-2018 11:38:08 | Fetching 'refs/heads/master' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-dbpedia.git'. Will try to do a shallow fetch. |
| 09-Jul-2018 11:38:08 | Warning: Permanently added '[127.0.0.1]:35350' (RSA) to the list of known hosts. |
| 09-Jul-2018 11:38:08 | From ssh://127.0.0.1:35350/cats/extractors-dbpedia |
| 09-Jul-2018 11:38:08 | * [new branch] master -> master |
| 09-Jul-2018 11:38:08 | * [new tag] browndog_v0.2.0 -> browndog_v0.2.0 |
| 09-Jul-2018 11:38:08 | * [new tag] browndog_v0.3.0 -> browndog_v0.3.0 |
| 09-Jul-2018 11:38:08 | Checking out revision 41c21decd56c8a967bf1fdb5d4d284f6b3b0de41. |
| 09-Jul-2018 11:38:08 | Already on 'master' |
| 09-Jul-2018 11:38:08 | Updated source code to revision: 41c21decd56c8a967bf1fdb5d4d284f6b3b0de41 |
| 09-Jul-2018 11:38:08 | Finished task 'Checkout Default Repository' with result: Success |
| 09-Jul-2018 11:38:08 | Running pre-build action: VCS Version Collector |
| 09-Jul-2018 11:38:08 | Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' |
| 09-Jul-2018 11:38:08 | Beginning to execute external process for build 'Clowder - extractors-dbpedia - Default Job #36 (CATS-EXDBP-JOB1-36)' ... running command line: /bin/sh docker.sh ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1 ... using extra environment variables: bamboo_planRepository_1_branch=master bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node bamboo_dependency_parent_0=CATS-PYC2-72 bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster bamboo_dependency_parent_total=1 bamboo_planRepository_1_branchDisplayName=master bamboo_repository_revision_number=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41 bamboo_repository_120946696_revision_number=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41 bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-EXDBP-JOB1-36 bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1 bamboo_planRepository_1_name=extractors-dbpedia bamboo_buildKey=CATS-EXDBP-JOB1 bamboo_capability_system_os=linux bamboo_shortPlanName=extractors-dbpedia bamboo_planRepository_name=extractors-dbpedia bamboo_buildNumber=36 bamboo_shortJobName=Default Job bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-EXDBP-JOB1-36 bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-dbpedia.git bamboo_agentId=140673027 bamboo_planName=Clowder - extractors-dbpedia bamboo_shortPlanKey=EXDBP bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt bamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node bamboo_shortJobKey=JOB1 bamboo_planRepository_revision=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41 bamboo_buildTimeStamp=2018-07-09T11:08:19.944-05:00 bamboo_repository_previous_revision_number=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41 bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1 bamboo_planRepository_previousRevision=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41 bamboo_repository_git_branch=master bamboo_buildResultKey=CATS-EXDBP-JOB1-36 bamboo_repository_branch_name=master bamboo_buildPlanName=Clowder - extractors-dbpedia - Default Job bamboo_planRepository_1_revision=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41 bamboo_capability_system_builder_command_python3=/usr/bin/python3 bamboo_repository_name=extractors-dbpedia bamboo_repository_120946696_previous_revision_number=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41 bamboo_repository_120946696_branch_name=master bamboo_buildFailed=false bamboo_capability_system_docker_executable=/usr/bin/docker bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt bamboo_repository_120946696_git_username= bamboo_planRepository_branch=master bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir bamboo_repository_120946696_git_branch=master bamboo_capability_system_git_executable=/usr/bin/git bamboo_repository_git_username= bamboo_planRepository_1_previousRevision=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41 bamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13 bamboo_planRepository_branchDisplayName=master bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs bamboo_planRepository_1_type=bbserver bamboo_planRepository_branchName=master bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7 bamboo_capability_system_hostname=buildserver-1 bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66 bamboo_repository_120946696_name=extractors-dbpedia bamboo_capability_system_software_mongo=/usr/bin/mongo bamboo_plan_storageTag=plan-120750095 bamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66 bamboo_planRepository_1_username= bamboo_planRepository_type=bbserver bamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-dbpedia.git bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4 bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9 bamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1 bamboo_planKey=CATS-EXDBP bamboo_repository_120946696_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-dbpedia.git bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-dbpedia.git bamboo_planRepository_username= bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66 bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41 bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60 bamboo_planRepository_1_branchName=master |
| 09-Jul-2018 11:38:08 | Sending build context to Docker daemon 163.3kB |
| 09-Jul-2018 11:38:08 | |
| 09-Jul-2018 11:38:09 | Step 1/13 : FROM clowder/pyclowder:2 |
| 09-Jul-2018 11:38:09 | 2: Pulling from clowder/pyclowder |
| 09-Jul-2018 11:38:09 | Digest: sha256:357f32d3a9d886f96d392d6cb74ff4abfba721e4c9bef8ac4b15f27ea23f0e8b |
| 09-Jul-2018 11:38:09 | Status: Image is up to date for clowder/pyclowder:2 |
| 09-Jul-2018 11:38:09 | ---> b93e3777165c |
| 09-Jul-2018 11:38:09 | Step 2/13 : MAINTAINER Luigi Marigni <lmarini@illinois.edu> |
| 09-Jul-2018 11:38:09 | ---> Running in 58e025dfb255 |
| 09-Jul-2018 11:38:10 | Removing intermediate container 58e025dfb255 |
| 09-Jul-2018 11:38:10 | ---> f560d4459c79 |
| 09-Jul-2018 11:38:10 | Step 3/13 : COPY requirements.txt /home/clowder/ |
| 09-Jul-2018 11:38:11 | ---> d97e0b88b9f5 |
| 09-Jul-2018 11:38:11 | Step 4/13 : USER root |
| 09-Jul-2018 11:38:11 | ---> Running in 340f7e3b2b3a |
| 09-Jul-2018 11:38:11 | Removing intermediate container 340f7e3b2b3a |
| 09-Jul-2018 11:38:11 | ---> ed0284388cd5 |
| 09-Jul-2018 11:38:11 | Step 5/13 : RUN apt-get update && apt-get -y install python-dev python-numpy gcc && pip install -r /home/clowder/requirements.txt |
| 09-Jul-2018 11:38:11 | ---> Running in 09d1c1d22b89 |
| 09-Jul-2018 11:38:13 | Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB] |
| 09-Jul-2018 11:38:13 | Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB] |
| 09-Jul-2018 11:38:14 | Get:3 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB] |
| 09-Jul-2018 11:38:14 | Get:4 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [83.5 kB] |
| 09-Jul-2018 11:38:14 | Get:5 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB] |
| 09-Jul-2018 11:38:14 | Get:6 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [660 kB] |
| 09-Jul-2018 11:38:14 | Get:7 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB] |
| 09-Jul-2018 11:38:14 | Get:8 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB] |
| 09-Jul-2018 11:38:14 | Get:9 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [452 kB] |
| 09-Jul-2018 11:38:14 | Get:10 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3735 B] |
| 09-Jul-2018 11:38:15 | Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB] |
| 09-Jul-2018 11:38:15 | Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB] |
| 09-Jul-2018 11:38:15 | Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB] |
| 09-Jul-2018 11:38:15 | Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB] |
| 09-Jul-2018 11:38:15 | Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [260 kB] |
| 09-Jul-2018 11:38:15 | Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1038 kB] |
| 09-Jul-2018 11:38:15 | Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB] |
| 09-Jul-2018 11:38:15 | Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [825 kB] |
| 09-Jul-2018 11:38:15 | Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB] |
| 09-Jul-2018 11:38:15 | Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7321 B] |
| 09-Jul-2018 11:38:15 | Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8088 B] |
| 09-Jul-2018 11:38:18 | Fetched 25.3 MB in 4s (5632 kB/s) |
| 09-Jul-2018 11:38:19 | Reading package lists... |
| 09-Jul-2018 11:38:20 | Reading package lists... |
| 09-Jul-2018 11:38:21 | Building dependency tree... |
| 09-Jul-2018 11:38:21 | Reading state information... |
| 09-Jul-2018 11:38:21 | The following additional packages will be installed: |
| 09-Jul-2018 11:38:21 | binutils cpp cpp-5 gcc-5 gcc-5-base libasan2 libatomic1 libblas-common |
| 09-Jul-2018 11:38:21 | libblas3 libc-dev-bin libc6-dev libcc1-0 libcilkrts5 libexpat1-dev |
| 09-Jul-2018 11:38:21 | libgcc-5-dev libgfortran3 libgmp10 libgomp1 libisl15 libitm1 liblapack3 |
| 09-Jul-2018 11:38:21 | liblsan0 libmpc3 libmpfr4 libmpx0 libpython-dev libpython2.7 |
| 09-Jul-2018 11:38:21 | libpython2.7-dev libquadmath0 libstdc++6 libtsan0 libubsan0 linux-libc-dev |
| 09-Jul-2018 11:38:21 | manpages manpages-dev python2.7-dev |
| 09-Jul-2018 11:38:21 | Suggested packages: |
| 09-Jul-2018 11:38:21 | binutils-doc cpp-doc gcc-5-locales gcc-multilib make autoconf automake |
| 09-Jul-2018 11:38:21 | libtool flex bison gdb gcc-doc gcc-5-multilib gcc-5-doc libgcc1-dbg |
| 09-Jul-2018 11:38:21 | libgomp1-dbg libitm1-dbg libatomic1-dbg libasan2-dbg liblsan0-dbg |
| 09-Jul-2018 11:38:21 | libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx0-dbg libquadmath0-dbg |
| 09-Jul-2018 11:38:21 | glibc-doc man-browser gfortran python-nose python-numpy-dbg python-numpy-doc |
| 09-Jul-2018 11:38:21 | The following NEW packages will be installed: |
| 09-Jul-2018 11:38:21 | binutils cpp cpp-5 gcc gcc-5 libasan2 libatomic1 libblas-common libblas3 |
| 09-Jul-2018 11:38:21 | libc-dev-bin libc6-dev libcc1-0 libcilkrts5 libexpat1-dev libgcc-5-dev |
| 09-Jul-2018 11:38:21 | libgfortran3 libgmp10 libgomp1 libisl15 libitm1 liblapack3 liblsan0 libmpc3 |
| 09-Jul-2018 11:38:21 | libmpfr4 libmpx0 libpython-dev libpython2.7 libpython2.7-dev libquadmath0 |
| 09-Jul-2018 11:38:21 | libtsan0 libubsan0 linux-libc-dev manpages manpages-dev python-dev |
| 09-Jul-2018 11:38:21 | python-numpy python2.7-dev |
| 09-Jul-2018 11:38:21 | The following packages will be upgraded: |
| 09-Jul-2018 11:38:21 | gcc-5-base libstdc++6 |
| 09-Jul-2018 11:38:21 | 2 upgraded, 37 newly installed, 0 to remove and 6 not upgraded. |
| 09-Jul-2018 11:38:21 | Need to get 62.6 MB of archives. |
| 09-Jul-2018 11:38:21 | After this operation, 166 MB of additional disk space will be used. |
| 09-Jul-2018 11:38:21 | Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB] |
| 09-Jul-2018 11:38:22 | Get:2 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpfr4 amd64 3.1.4-1 [191 kB] |
| 09-Jul-2018 11:38:22 | Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpc3 amd64 1.0.3-1 [39.7 kB] |
| 09-Jul-2018 11:38:22 | Get:4 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB] |
| 09-Jul-2018 11:38:22 | Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB] |
| 09-Jul-2018 11:38:22 | Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 manpages all 4.04-2 [1087 kB] |
| 09-Jul-2018 11:38:22 | Get:7 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 binutils amd64 2.26.1-1ubuntu1~16.04.6 [2311 kB] |
| 09-Jul-2018 11:38:22 | Get:8 http://archive.ubuntu.com/ubuntu xenial/main amd64 libisl15 amd64 0.16.1-1 [524 kB] |
| 09-Jul-2018 11:38:22 | Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 cpp-5 amd64 5.4.0-6ubuntu1~16.04.10 [7671 kB] |
| 09-Jul-2018 11:38:22 | Get:10 http://archive.ubuntu.com/ubuntu xenial/main amd64 cpp amd64 4:5.3.1-1ubuntu1 [27.7 kB] |
| 09-Jul-2018 11:38:22 | Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcc1-0 amd64 5.4.0-6ubuntu1~16.04.10 [38.8 kB] |
| 09-Jul-2018 11:38:22 | Get:12 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgomp1 amd64 5.4.0-6ubuntu1~16.04.10 [55.1 kB] |
| 09-Jul-2018 11:38:22 | Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libitm1 amd64 5.4.0-6ubuntu1~16.04.10 [27.4 kB] |
| 09-Jul-2018 11:38:22 | Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libatomic1 amd64 5.4.0-6ubuntu1~16.04.10 [8888 B] |
| 09-Jul-2018 11:38:22 | Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasan2 amd64 5.4.0-6ubuntu1~16.04.10 [264 kB] |
| 09-Jul-2018 11:38:22 | Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 liblsan0 amd64 5.4.0-6ubuntu1~16.04.10 [105 kB] |
| 09-Jul-2018 11:38:22 | Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtsan0 amd64 5.4.0-6ubuntu1~16.04.10 [244 kB] |
| 09-Jul-2018 11:38:22 | Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libubsan0 amd64 5.4.0-6ubuntu1~16.04.10 [95.3 kB] |
| 09-Jul-2018 11:38:22 | Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcilkrts5 amd64 5.4.0-6ubuntu1~16.04.10 [40.1 kB] |
| 09-Jul-2018 11:38:22 | Get:20 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmpx0 amd64 5.4.0-6ubuntu1~16.04.10 [9764 B] |
| 09-Jul-2018 11:38:22 | Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB] |
| 09-Jul-2018 11:38:22 | Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgcc-5-dev amd64 5.4.0-6ubuntu1~16.04.10 [2228 kB] |
| 09-Jul-2018 11:38:23 | Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5 amd64 5.4.0-6ubuntu1~16.04.10 [8426 kB] |
| 09-Jul-2018 11:38:23 | Get:24 http://archive.ubuntu.com/ubuntu xenial/main amd64 gcc amd64 4:5.3.1-1ubuntu1 [5244 B] |
| 09-Jul-2018 11:38:23 | Get:25 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B] |
| 09-Jul-2018 11:38:23 | Get:26 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB] |
| 09-Jul-2018 11:38:23 | Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc-dev-bin amd64 2.23-0ubuntu10 [68.7 kB] |
| 09-Jul-2018 11:38:23 | Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 linux-libc-dev amd64 4.4.0-130.156 [866 kB] |
| 09-Jul-2018 11:38:23 | Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc6-dev amd64 2.23-0ubuntu10 [2079 kB] |
| 09-Jul-2018 11:38:23 | Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1-dev amd64 2.1.0-7ubuntu0.16.04.3 [115 kB] |
| 09-Jul-2018 11:38:23 | Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB] |
| 09-Jul-2018 11:38:23 | Get:32 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB] |
| 09-Jul-2018 11:38:23 | Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7 amd64 2.7.12-1ubuntu0~16.04.3 [1070 kB] |
| 09-Jul-2018 11:38:23 | Get:34 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-dev amd64 2.7.12-1ubuntu0~16.04.3 [27.8 MB] |
| 09-Jul-2018 11:38:24 | Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython-dev amd64 2.7.12-1~16.04 [7840 B] |
| 09-Jul-2018 11:38:24 | Get:36 http://archive.ubuntu.com/ubuntu xenial/main amd64 manpages-dev all 4.04-2 [2048 kB] |
| 09-Jul-2018 11:38:24 | Get:37 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7-dev amd64 2.7.12-1ubuntu0~16.04.3 [276 kB] |
| 09-Jul-2018 11:38:24 | Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-dev amd64 2.7.12-1~16.04 [1186 B] |
| 09-Jul-2018 11:38:24 | Get:39 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-numpy amd64 1:1.11.0-1ubuntu1 [1763 kB] |
| 09-Jul-2018 11:38:25 | debconf: delaying package configuration, since apt-utils is not installed |
| 09-Jul-2018 11:38:25 | Fetched 62.6 MB in 3s (18.3 MB/s) |
| 09-Jul-2018 11:38:25 | Selecting previously unselected package libgmp10:amd64. |
| 09-Jul-2018 11:38:25 | (Reading database ... |
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| 09-Jul-2018 11:38:29 | Setting up gcc-5-base:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
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| 09-Jul-2018 11:38:32 | Preparing to unpack .../manpages_4.04-2_all.deb ... |
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| 09-Jul-2018 11:38:38 | Selecting previously unselected package libcc1-0:amd64. |
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| 09-Jul-2018 11:38:40 | Selecting previously unselected package libasan2:amd64. |
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| 09-Jul-2018 11:38:42 | Selecting previously unselected package libubsan0:amd64. |
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| 09-Jul-2018 11:38:42 | Unpacking libubsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:38:43 | Selecting previously unselected package libcilkrts5:amd64. |
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| 09-Jul-2018 11:38:44 | Selecting previously unselected package libmpx0:amd64. |
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| 09-Jul-2018 11:38:44 | Unpacking libmpx0:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:38:45 | Selecting previously unselected package libquadmath0:amd64. |
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| 09-Jul-2018 11:38:45 | Selecting previously unselected package libgcc-5-dev:amd64. |
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| 09-Jul-2018 11:38:46 | Selecting previously unselected package gcc-5. |
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| 09-Jul-2018 11:38:49 | Selecting previously unselected package gcc. |
| 09-Jul-2018 11:38:49 | Preparing to unpack .../gcc_4%3a5.3.1-1ubuntu1_amd64.deb ... |
| 09-Jul-2018 11:38:49 | Unpacking gcc (4:5.3.1-1ubuntu1) ... |
| 09-Jul-2018 11:38:49 | Selecting previously unselected package libblas-common. |
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| 09-Jul-2018 11:38:50 | Selecting previously unselected package libc-dev-bin. |
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| 09-Jul-2018 11:38:51 | Selecting previously unselected package linux-libc-dev:amd64. |
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| 09-Jul-2018 11:38:51 | Selecting previously unselected package libc6-dev:amd64. |
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| 09-Jul-2018 11:38:53 | Selecting previously unselected package libexpat1-dev:amd64. |
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| 09-Jul-2018 11:38:53 | Selecting previously unselected package libgfortran3:amd64. |
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| 09-Jul-2018 11:38:54 | Selecting previously unselected package liblapack3. |
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| 09-Jul-2018 11:38:55 | Selecting previously unselected package libpython2.7:amd64. |
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| 09-Jul-2018 11:39:01 | Selecting previously unselected package manpages-dev. |
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| 09-Jul-2018 11:39:02 | Selecting previously unselected package python2.7-dev. |
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| 09-Jul-2018 11:39:02 | Selecting previously unselected package python-dev. |
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| 09-Jul-2018 11:39:03 | Selecting previously unselected package python-numpy. |
| 09-Jul-2018 11:39:03 | Preparing to unpack .../python-numpy_1%3a1.11.0-1ubuntu1_amd64.deb ... |
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| 09-Jul-2018 11:39:04 | Processing triggers for libc-bin (2.23-0ubuntu10) ... |
| 09-Jul-2018 11:39:05 | Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ... |
| 09-Jul-2018 11:39:05 | Setting up libmpfr4:amd64 (3.1.4-1) ... |
| 09-Jul-2018 11:39:05 | Setting up libmpc3:amd64 (1.0.3-1) ... |
| 09-Jul-2018 11:39:06 | Setting up manpages (4.04-2) ... |
| 09-Jul-2018 11:39:06 | Setting up binutils (2.26.1-1ubuntu1~16.04.6) ... |
| 09-Jul-2018 11:39:06 | Setting up libisl15:amd64 (0.16.1-1) ... |
| 09-Jul-2018 11:39:06 | Setting up cpp-5 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:06 | Setting up cpp (4:5.3.1-1ubuntu1) ... |
| 09-Jul-2018 11:39:06 | Setting up libcc1-0:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:07 | Setting up libgomp1:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:07 | Setting up libitm1:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:07 | Setting up libatomic1:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:07 | Setting up libasan2:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:07 | Setting up liblsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
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| 09-Jul-2018 11:39:07 | Setting up libubsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:08 | Setting up libcilkrts5:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:08 | Setting up libmpx0:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:08 | Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:08 | Setting up libgcc-5-dev:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:08 | Setting up gcc-5 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:08 | Setting up gcc (4:5.3.1-1ubuntu1) ... |
| 09-Jul-2018 11:39:09 | Setting up libblas-common (3.6.0-2ubuntu2) ... |
| 09-Jul-2018 11:39:09 | Setting up libblas3 (3.6.0-2ubuntu2) ... |
| 09-Jul-2018 11:39:09 | update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode |
| 09-Jul-2018 11:39:09 | Setting up libc-dev-bin (2.23-0ubuntu10) ... |
| 09-Jul-2018 11:39:09 | Setting up linux-libc-dev:amd64 (4.4.0-130.156) ... |
| 09-Jul-2018 11:39:09 | Setting up libc6-dev:amd64 (2.23-0ubuntu10) ... |
| 09-Jul-2018 11:39:09 | Setting up libexpat1-dev:amd64 (2.1.0-7ubuntu0.16.04.3) ... |
| 09-Jul-2018 11:39:09 | Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ... |
| 09-Jul-2018 11:39:10 | Setting up liblapack3 (3.6.0-2ubuntu2) ... |
| 09-Jul-2018 11:39:10 | update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode |
| 09-Jul-2018 11:39:10 | Setting up libpython2.7:amd64 (2.7.12-1ubuntu0~16.04.3) ... |
| 09-Jul-2018 11:39:10 | Setting up libpython2.7-dev:amd64 (2.7.12-1ubuntu0~16.04.3) ... |
| 09-Jul-2018 11:39:10 | Setting up libpython-dev:amd64 (2.7.12-1~16.04) ... |
| 09-Jul-2018 11:39:10 | Setting up manpages-dev (4.04-2) ... |
| 09-Jul-2018 11:39:11 | Setting up python2.7-dev (2.7.12-1ubuntu0~16.04.3) ... |
| 09-Jul-2018 11:39:11 | Setting up python-dev (2.7.12-1~16.04) ... |
| 09-Jul-2018 11:39:11 | Setting up python-numpy (1:1.11.0-1ubuntu1) ... |
| 09-Jul-2018 11:39:14 | Processing triggers for libc-bin (2.23-0ubuntu10) ... |
| 09-Jul-2018 11:39:16 | Collecting Flask==0.10.1 (from -r /home/clowder/requirements.txt (line 1)) |
| 09-Jul-2018 11:39:16 | Downloading https://files.pythonhosted.org/packages/db/9c/149ba60c47d107f85fe52564133348458f093dd5e6b57a5b60ab9ac517bb/Flask-0.10.1.tar.gz (544kB) |
| 09-Jul-2018 11:39:16 | Collecting html5lib==0.99999 (from -r /home/clowder/requirements.txt (line 2)) |
| 09-Jul-2018 11:39:16 | Downloading https://files.pythonhosted.org/packages/0d/0f/6e7a4171c150e4c52cff10184697a63dd9eaeae5c7b7f5023ef6b16aaf59/html5lib-0.99999.tar.gz (887kB) |
| 09-Jul-2018 11:39:17 | Collecting isodate==0.5.1 (from -r /home/clowder/requirements.txt (line 3)) |
| 09-Jul-2018 11:39:18 | Downloading https://files.pythonhosted.org/packages/4a/98/07f5bb685219005c3a5788ebe492561c44a75d6b690446667ab508ef070d/isodate-0.5.1.tar.gz |
| 09-Jul-2018 11:39:18 | Collecting itsdangerous==0.24 (from -r /home/clowder/requirements.txt (line 4)) |
| 09-Jul-2018 11:39:18 | Downloading https://files.pythonhosted.org/packages/dc/b4/a60bcdba945c00f6d608d8975131ab3f25b22f2bcfe1dab221165194b2d4/itsdangerous-0.24.tar.gz (46kB) |
| 09-Jul-2018 11:39:19 | Collecting Jinja2==2.7.3 (from -r /home/clowder/requirements.txt (line 5)) |
| 09-Jul-2018 11:39:19 | Downloading https://files.pythonhosted.org/packages/b0/73/eab0bca302d6d6a0b5c402f47ad1760dc9cb2dd14bbc1873ad48db258e4d/Jinja2-2.7.3.tar.gz (378kB) |
| 09-Jul-2018 11:39:19 | Collecting MarkupSafe==0.23 (from -r /home/clowder/requirements.txt (line 6)) |
| 09-Jul-2018 11:39:19 | Downloading https://files.pythonhosted.org/packages/c0/41/bae1254e0396c0cc8cf1751cb7d9afc90a602353695af5952530482c963f/MarkupSafe-0.23.tar.gz |
| 09-Jul-2018 11:39:20 | Collecting nltk==3.0.3 (from -r /home/clowder/requirements.txt (line 7)) |
| 09-Jul-2018 11:39:20 | Downloading https://files.pythonhosted.org/packages/69/3e/b5e0e0210931539a3f77e0537e2e462b929b019a723895bd69357ad20bc3/nltk-3.0.3.tar.gz (1.0MB) |
| 09-Jul-2018 11:39:21 | Collecting pika==0.10.0 (from -r /home/clowder/requirements.txt (line 9)) |
| 09-Jul-2018 11:39:21 | Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB) |
| 09-Jul-2018 11:39:21 | Collecting pyparsing==2.0.3 (from -r /home/clowder/requirements.txt (line 11)) |
| 09-Jul-2018 11:39:21 | Downloading https://files.pythonhosted.org/packages/8f/f4/3a70b5e5b865b1ec45fe48dc5a57cd4facb5c7bd80e5cb1255c362732e81/pyparsing-2.0.3-py2.py3-none-any.whl |
| 09-Jul-2018 11:39:22 | Collecting rdflib==4.2.0 (from -r /home/clowder/requirements.txt (line 12)) |
| 09-Jul-2018 11:39:22 | Downloading https://files.pythonhosted.org/packages/23/13/cb881e853fa0ed79e35dbd527a98cb986c3e0d5fae8ebfdb6ef3cffb6298/rdflib-4.2.0.tar.gz (881kB) |
| 09-Jul-2018 11:39:24 | Collecting requests==2.7.0 (from -r /home/clowder/requirements.txt (line 13)) |
| 09-Jul-2018 11:39:25 | Downloading https://files.pythonhosted.org/packages/26/ff/c71b3943bebdd9f7ceb9e137296370587eb0b33fe2eb3732ae168bc45204/requests-2.7.0-py2.py3-none-any.whl (470kB) |
| 09-Jul-2018 11:39:25 | Collecting six==1.9.0 (from -r /home/clowder/requirements.txt (line 14)) |
| 09-Jul-2018 11:39:25 | Downloading https://files.pythonhosted.org/packages/10/e3/a7f8eea80a9fa8358c1cd89ef489bc03675e69e54ed2982cd6f2a28d8295/six-1.9.0-py2.py3-none-any.whl |
| 09-Jul-2018 11:39:25 | Collecting SPARQLWrapper==1.6.4 (from -r /home/clowder/requirements.txt (line 15)) |
| 09-Jul-2018 11:39:25 | Downloading https://files.pythonhosted.org/packages/6b/07/751e164e2e5debc18eb92fbe0798a62d668af8801c8adf38b6f32bcc5eed/SPARQLWrapper-1.6.4.tar.gz |
| 09-Jul-2018 11:39:25 | Collecting Werkzeug==0.10.4 (from -r /home/clowder/requirements.txt (line 16)) |
| 09-Jul-2018 11:39:26 | Downloading https://files.pythonhosted.org/packages/49/0c/e33c2caec86a7926186f7d454f6a901f45f05ad90337c6972d170b9ee806/Werkzeug-0.10.4-py2.py3-none-any.whl (293kB) |
| 09-Jul-2018 11:39:26 | Collecting wheel==0.24.0 (from -r /home/clowder/requirements.txt (line 17)) |
| 09-Jul-2018 11:39:26 | Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB) |
| 09-Jul-2018 11:39:26 | Building wheels for collected packages: Flask, html5lib, isodate, itsdangerous, Jinja2, MarkupSafe, nltk, rdflib, SPARQLWrapper |
| 09-Jul-2018 11:39:26 | Running setup.py bdist_wheel for Flask: started |
| 09-Jul-2018 11:39:26 | Running setup.py bdist_wheel for Flask: finished with status 'error' |
| 09-Jul-2018 11:39:26 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-UHCjei/Flask/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpHKEOyWpip-wheel- --python-tag cp27: |
| 09-Jul-2018 11:39:26 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 09-Jul-2018 11:39:26 | or: -c --help [cmd1 cmd2 ...] |
| 09-Jul-2018 11:39:26 | or: -c --help-commands |
| 09-Jul-2018 11:39:26 | or: -c cmd --help |
| 09-Jul-2018 11:39:26 | |
| 09-Jul-2018 11:39:26 | error: invalid command 'bdist_wheel' |
| 09-Jul-2018 11:39:26 | |
| 09-Jul-2018 11:39:26 | ---------------------------------------- |
| 09-Jul-2018 11:39:26 | Failed building wheel for Flask |
| 09-Jul-2018 11:39:26 | Running setup.py clean for Flask |
| 09-Jul-2018 11:39:27 | Running setup.py bdist_wheel for html5lib: started |
| 09-Jul-2018 11:39:27 | Running setup.py bdist_wheel for html5lib: finished with status 'error' |
| 09-Jul-2018 11:39:27 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-UHCjei/html5lib/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpGLCdrSpip-wheel- --python-tag cp27: |
| 09-Jul-2018 11:39:27 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 09-Jul-2018 11:39:27 | or: -c --help [cmd1 cmd2 ...] |
| 09-Jul-2018 11:39:27 | or: -c --help-commands |
| 09-Jul-2018 11:39:27 | or: -c cmd --help |
| 09-Jul-2018 11:39:27 | |
| 09-Jul-2018 11:39:27 | error: invalid command 'bdist_wheel' |
| 09-Jul-2018 11:39:27 | |
| 09-Jul-2018 11:39:27 | ---------------------------------------- |
| 09-Jul-2018 11:39:27 | Failed building wheel for html5lib |
| 09-Jul-2018 11:39:27 | Running setup.py clean for html5lib |
| 09-Jul-2018 11:39:27 | Running setup.py bdist_wheel for isodate: started |
| 09-Jul-2018 11:39:27 | Running setup.py bdist_wheel for isodate: finished with status 'error' |
| 09-Jul-2018 11:39:27 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-UHCjei/isodate/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpnvstB5pip-wheel- --python-tag cp27: |
| 09-Jul-2018 11:39:27 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 09-Jul-2018 11:39:27 | or: -c --help [cmd1 cmd2 ...] |
| 09-Jul-2018 11:39:27 | or: -c --help-commands |
| 09-Jul-2018 11:39:27 | or: -c cmd --help |
| 09-Jul-2018 11:39:27 | |
| 09-Jul-2018 11:39:27 | error: invalid command 'bdist_wheel' |
| 09-Jul-2018 11:39:27 | |
| 09-Jul-2018 11:39:27 | ---------------------------------------- |
| 09-Jul-2018 11:39:27 | Failed building wheel for isodate |
| 09-Jul-2018 11:39:27 | Running setup.py clean for isodate |
| 09-Jul-2018 11:39:28 | Running setup.py bdist_wheel for itsdangerous: started |
| 09-Jul-2018 11:39:28 | Running setup.py bdist_wheel for itsdangerous: finished with status 'error' |
| 09-Jul-2018 11:39:28 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-UHCjei/itsdangerous/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpUha5OTpip-wheel- --python-tag cp27: |
| 09-Jul-2018 11:39:28 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 09-Jul-2018 11:39:28 | or: -c --help [cmd1 cmd2 ...] |
| 09-Jul-2018 11:39:28 | or: -c --help-commands |
| 09-Jul-2018 11:39:28 | or: -c cmd --help |
| 09-Jul-2018 11:39:28 | |
| 09-Jul-2018 11:39:28 | error: invalid command 'bdist_wheel' |
| 09-Jul-2018 11:39:28 | |
| 09-Jul-2018 11:39:28 | ---------------------------------------- |
| 09-Jul-2018 11:39:28 | Failed building wheel for itsdangerous |
| 09-Jul-2018 11:39:28 | Running setup.py clean for itsdangerous |
| 09-Jul-2018 11:39:28 | Running setup.py bdist_wheel for Jinja2: started |
| 09-Jul-2018 11:39:29 | Running setup.py bdist_wheel for Jinja2: finished with status 'error' |
| 09-Jul-2018 11:39:29 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-UHCjei/Jinja2/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpzFwYwDpip-wheel- --python-tag cp27: |
| 09-Jul-2018 11:39:29 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 09-Jul-2018 11:39:29 | or: -c --help [cmd1 cmd2 ...] |
| 09-Jul-2018 11:39:29 | or: -c --help-commands |
| 09-Jul-2018 11:39:29 | or: -c cmd --help |
| 09-Jul-2018 11:39:29 | |
| 09-Jul-2018 11:39:29 | error: invalid command 'bdist_wheel' |
| 09-Jul-2018 11:39:29 | |
| 09-Jul-2018 11:39:29 | ---------------------------------------- |
| 09-Jul-2018 11:39:29 | Failed building wheel for Jinja2 |
| 09-Jul-2018 11:39:29 | Running setup.py clean for Jinja2 |
| 09-Jul-2018 11:39:29 | Running setup.py bdist_wheel for MarkupSafe: started |
| 09-Jul-2018 11:39:29 | Running setup.py bdist_wheel for MarkupSafe: finished with status 'error' |
| 09-Jul-2018 11:39:29 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-UHCjei/MarkupSafe/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpkYhGDOpip-wheel- --python-tag cp27: |
| 09-Jul-2018 11:39:29 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 09-Jul-2018 11:39:29 | or: -c --help [cmd1 cmd2 ...] |
| 09-Jul-2018 11:39:29 | or: -c --help-commands |
| 09-Jul-2018 11:39:29 | or: -c cmd --help |
| 09-Jul-2018 11:39:29 | |
| 09-Jul-2018 11:39:29 | error: invalid command 'bdist_wheel' |
| 09-Jul-2018 11:39:29 | |
| 09-Jul-2018 11:39:29 | ---------------------------------------- |
| 09-Jul-2018 11:39:29 | Failed building wheel for MarkupSafe |
| 09-Jul-2018 11:39:29 | Running setup.py clean for MarkupSafe |
| 09-Jul-2018 11:39:30 | Running setup.py bdist_wheel for nltk: started |
| 09-Jul-2018 11:39:30 | Running setup.py bdist_wheel for nltk: finished with status 'error' |
| 09-Jul-2018 11:39:30 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-UHCjei/nltk/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpW99pLUpip-wheel- --python-tag cp27: |
| 09-Jul-2018 11:39:30 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 09-Jul-2018 11:39:30 | or: -c --help [cmd1 cmd2 ...] |
| 09-Jul-2018 11:39:30 | or: -c --help-commands |
| 09-Jul-2018 11:39:30 | or: -c cmd --help |
| 09-Jul-2018 11:39:30 | |
| 09-Jul-2018 11:39:30 | error: invalid command 'bdist_wheel' |
| 09-Jul-2018 11:39:30 | |
| 09-Jul-2018 11:39:30 | ---------------------------------------- |
| 09-Jul-2018 11:39:30 | Failed building wheel for nltk |
| 09-Jul-2018 11:39:30 | Running setup.py clean for nltk |
| 09-Jul-2018 11:39:30 | Running setup.py bdist_wheel for rdflib: started |
| 09-Jul-2018 11:39:31 | Running setup.py bdist_wheel for rdflib: finished with status 'error' |
| 09-Jul-2018 11:39:31 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-UHCjei/rdflib/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpf7qkOdpip-wheel- --python-tag cp27: |
| 09-Jul-2018 11:39:31 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 09-Jul-2018 11:39:31 | or: -c --help [cmd1 cmd2 ...] |
| 09-Jul-2018 11:39:31 | or: -c --help-commands |
| 09-Jul-2018 11:39:31 | or: -c cmd --help |
| 09-Jul-2018 11:39:31 | |
| 09-Jul-2018 11:39:31 | error: invalid command 'bdist_wheel' |
| 09-Jul-2018 11:39:31 | |
| 09-Jul-2018 11:39:31 | ---------------------------------------- |
| 09-Jul-2018 11:39:31 | Failed building wheel for rdflib |
| 09-Jul-2018 11:39:31 | Running setup.py clean for rdflib |
| 09-Jul-2018 11:39:31 | Running setup.py bdist_wheel for SPARQLWrapper: started |
| 09-Jul-2018 11:39:31 | Running setup.py bdist_wheel for SPARQLWrapper: finished with status 'error' |
| 09-Jul-2018 11:39:31 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-UHCjei/SPARQLWrapper/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmp4T8CBJpip-wheel- --python-tag cp27: |
| 09-Jul-2018 11:39:31 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 09-Jul-2018 11:39:31 | or: -c --help [cmd1 cmd2 ...] |
| 09-Jul-2018 11:39:31 | or: -c --help-commands |
| 09-Jul-2018 11:39:31 | or: -c cmd --help |
| 09-Jul-2018 11:39:31 | |
| 09-Jul-2018 11:39:31 | error: invalid command 'bdist_wheel' |
| 09-Jul-2018 11:39:31 | |
| 09-Jul-2018 11:39:31 | ---------------------------------------- |
| 09-Jul-2018 11:39:31 | Failed building wheel for SPARQLWrapper |
| 09-Jul-2018 11:39:31 | Running setup.py clean for SPARQLWrapper |
| 09-Jul-2018 11:39:32 | Failed to build Flask html5lib isodate itsdangerous Jinja2 MarkupSafe nltk rdflib SPARQLWrapper |
| 09-Jul-2018 11:39:32 | Installing collected packages: Werkzeug, MarkupSafe, Jinja2, itsdangerous, Flask, six, html5lib, isodate, nltk, pika, pyparsing, SPARQLWrapper, rdflib, requests, wheel |
| 09-Jul-2018 11:39:32 | Running setup.py install for MarkupSafe: started |
| 09-Jul-2018 11:39:33 | Running setup.py install for MarkupSafe: finished with status 'done' |
| 09-Jul-2018 11:39:33 | Running setup.py install for Jinja2: started |
| 09-Jul-2018 11:39:33 | Running setup.py install for Jinja2: finished with status 'done' |
| 09-Jul-2018 11:39:33 | Running setup.py install for itsdangerous: started |
| 09-Jul-2018 11:39:34 | Running setup.py install for itsdangerous: finished with status 'done' |
| 09-Jul-2018 11:39:34 | Running setup.py install for Flask: started |
| 09-Jul-2018 11:39:35 | Running setup.py install for Flask: finished with status 'done' |
| 09-Jul-2018 11:39:35 | Running setup.py install for html5lib: started |
| 09-Jul-2018 11:39:35 | Running setup.py install for html5lib: finished with status 'done' |
| 09-Jul-2018 11:39:35 | Running setup.py install for isodate: started |
| 09-Jul-2018 11:39:36 | Running setup.py install for isodate: finished with status 'done' |
| 09-Jul-2018 11:39:36 | Running setup.py install for nltk: started |
| 09-Jul-2018 11:39:37 | Running setup.py install for nltk: finished with status 'done' |
| 09-Jul-2018 11:39:37 | Found existing installation: pika 0.11.2 |
| 09-Jul-2018 11:39:38 | Uninstalling pika-0.11.2: |
| 09-Jul-2018 11:39:39 | Successfully uninstalled pika-0.11.2 |
| 09-Jul-2018 11:39:39 | Running setup.py install for SPARQLWrapper: started |
| 09-Jul-2018 11:39:40 | Running setup.py install for SPARQLWrapper: finished with status 'done' |
| 09-Jul-2018 11:39:40 | Running setup.py install for rdflib: started |
| 09-Jul-2018 11:39:41 | Running setup.py install for rdflib: finished with status 'done' |
| 09-Jul-2018 11:39:42 | Found existing installation: requests 2.18.4 |
| 09-Jul-2018 11:39:42 | Uninstalling requests-2.18.4: |
| 09-Jul-2018 11:39:43 | Successfully uninstalled requests-2.18.4 |
| 09-Jul-2018 11:39:44 | Successfully installed Flask-0.10.1 Jinja2-2.7.3 MarkupSafe-0.23 SPARQLWrapper-1.6.4 Werkzeug-0.10.4 html5lib-0.99999 isodate-0.5.1 itsdangerous-0.24 nltk-3.0.3 pika-0.10.0 pyparsing-2.0.3 rdflib-4.2.0 requests-2.7.0 six-1.9.0 wheel-0.24.0 |
| 09-Jul-2018 11:39:44 | You are using pip version 8.1.1, however version 10.0.1 is available. |
| 09-Jul-2018 11:39:44 | You should consider upgrading via the 'pip install --upgrade pip' command. |
| 09-Jul-2018 11:39:52 | Removing intermediate container 09d1c1d22b89 |
| 09-Jul-2018 11:39:52 | ---> a42df59ccef8 |
| 09-Jul-2018 11:39:52 | Step 6/13 : USER clowder |
| 09-Jul-2018 11:39:52 | ---> Running in 197fb81231bd |
| 09-Jul-2018 11:39:53 | Removing intermediate container 197fb81231bd |
| 09-Jul-2018 11:39:53 | ---> 51b038d3aaf6 |
| 09-Jul-2018 11:39:53 | Step 7/13 : COPY namedentityrecognition.py /home/clowder/ |
| 09-Jul-2018 11:39:53 | ---> e407cc659172 |
| 09-Jul-2018 11:39:53 | Step 8/13 : RUN /home/clowder/namedentityrecognition.py |
| 09-Jul-2018 11:39:53 | ---> Running in 37a3ccbd4230 |
| 09-Jul-2018 11:39:54 | linux spec user: unable to find user clowder: no matching entries in passwd file |
| 09-Jul-2018 11:39:54 | FAILED build of ./Dockerfile |
| 09-Jul-2018 11:39:54 | docker.sh: 53: exit: Illegal number: -1 |
| 09-Jul-2018 11:39:54 | Failing task since return code of [/bin/sh docker.sh] was 2 while expected 0 |
| 09-Jul-2018 11:39:54 | Finished task 'docker build' with result: Failed |
| 09-Jul-2018 11:39:54 | Running post build plugin 'Docker Container Cleanup' |
| 09-Jul-2018 11:39:54 | Running post build plugin 'NCover Results Collector' |
| 09-Jul-2018 11:39:54 | Running post build plugin 'Clover Results Collector' |
| 09-Jul-2018 11:39:54 | Running post build plugin 'npm Cache Cleanup' |
| 09-Jul-2018 11:39:54 | Running post build plugin 'Artifact Copier' |
| 09-Jul-2018 11:39:54 | Finalising the build... |
| 09-Jul-2018 11:39:54 | Stopping timer. |
| 09-Jul-2018 11:39:54 | Build CATS-EXDBP-JOB1-36 completed. |
| 09-Jul-2018 11:39:54 | Running on server: post build plugin 'NCover Results Collector' |
| 09-Jul-2018 11:39:54 | Running on server: post build plugin 'Build Hanging Detection Configuration' |
| 09-Jul-2018 11:39:54 | Running on server: post build plugin 'Clover Delta Calculator' |
| 09-Jul-2018 11:39:54 | Running on server: post build plugin 'Maven Dependencies Postprocessor' |
| 09-Jul-2018 11:39:54 | All post build plugins have finished |
| 09-Jul-2018 11:39:54 | Generating build results summary... |
| 09-Jul-2018 11:39:54 | Saving build results to disk... |
| 09-Jul-2018 11:39:54 | Logging substituted variables... |
| 09-Jul-2018 11:39:54 | Indexing build results... |
| 09-Jul-2018 11:39:54 | Finished building CATS-EXDBP-JOB1-36. |