Build: #37 failed

Job: Default Job failed

Stages & jobs

  1. Default Stage

Build log

The build generated 570 lines of output. Download or view full build log.

12-Jul-2018 13:59:40 Build Clowder - extractors-dbpedia - Default Job #37 (CATS-EXDBP-JOB1-37) started building on agent buildserver-2.os.ncsa.edu
12-Jul-2018 13:59:40 Remote agent on host buildserver-2.os.ncsa.edu
12-Jul-2018 13:59:40 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1
12-Jul-2018 13:59:40 Executing build Clowder - extractors-dbpedia - Default Job #37 (CATS-EXDBP-JOB1-37)
12-Jul-2018 13:59:40 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
12-Jul-2018 13:59:40 Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1
12-Jul-2018 13:59:40 Updating source code to revision: 41c21decd56c8a967bf1fdb5d4d284f6b3b0de41
12-Jul-2018 13:59:40 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1/.git'.
12-Jul-2018 13:59:40 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1/.git/
12-Jul-2018 13:59:40 Fetching 'refs/heads/master' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-dbpedia.git'. Will try to do a shallow fetch.
12-Jul-2018 13:59:40 Warning: Permanently added '[127.0.0.1]:42343' (RSA) to the list of known hosts.
12-Jul-2018 13:59:42 From ssh://127.0.0.1:42343/cats/extractors-dbpedia
12-Jul-2018 13:59:42 * [new branch]      master     -> master
12-Jul-2018 13:59:42 * [new tag]         browndog_v0.2.0 -> browndog_v0.2.0
12-Jul-2018 13:59:42 * [new tag]         browndog_v0.3.0 -> browndog_v0.3.0
12-Jul-2018 13:59:42 Checking out revision 41c21decd56c8a967bf1fdb5d4d284f6b3b0de41.
12-Jul-2018 13:59:42 Already on 'master'
12-Jul-2018 13:59:42 Updated source code to revision: 41c21decd56c8a967bf1fdb5d4d284f6b3b0de41
12-Jul-2018 13:59:42 Finished task 'Checkout Default Repository' with result: Success
12-Jul-2018 13:59:42 Running pre-build action: VCS Version Collector
12-Jul-2018 13:59:42 Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
12-Jul-2018 13:59:42
Beginning to execute external process for build 'Clowder - extractors-dbpedia - Default Job #37 (CATS-EXDBP-JOB1-37)'
... running command line:
/bin/sh docker.sh
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1
... using extra environment variables:
bamboo_planRepository_1_branch=master
bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm
bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster
bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node
bamboo_dependency_parent_0=CATS-PYC2-73
bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_dependency_parent_total=1
bamboo_planRepository_1_branchDisplayName=master
bamboo_repository_revision_number=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41
bamboo_repository_120946696_revision_number=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-EXDBP-JOB1-37
bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1
bamboo_planRepository_1_name=extractors-dbpedia
bamboo_buildKey=CATS-EXDBP-JOB1
bamboo_capability_system_os=linux
bamboo_shortPlanName=extractors-dbpedia
bamboo_planRepository_name=extractors-dbpedia
bamboo_buildNumber=37
bamboo_shortJobName=Default Job
bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-EXDBP-JOB1-37
bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-dbpedia.git
bamboo_agentId=140673028
bamboo_planName=Clowder - extractors-dbpedia
bamboo_shortPlanKey=EXDBP
bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
bamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node
bamboo_shortJobKey=JOB1
bamboo_planRepository_revision=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41
bamboo_buildTimeStamp=2018-07-12T13:40:48.404-05:00
bamboo_repository_previous_revision_number=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
bamboo_planRepository_previousRevision=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41
bamboo_repository_git_branch=master
bamboo_buildResultKey=CATS-EXDBP-JOB1-37
bamboo_repository_branch_name=master
bamboo_buildPlanName=Clowder - extractors-dbpedia - Default Job
bamboo_planRepository_1_revision=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41
bamboo_capability_system_builder_command_python3=/usr/bin/python3
bamboo_repository_name=extractors-dbpedia
bamboo_repository_120946696_previous_revision_number=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41
bamboo_repository_120946696_branch_name=master
bamboo_buildFailed=false
bamboo_capability_system_docker_executable=/usr/bin/docker
bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt
bamboo_repository_120946696_git_username=
bamboo_planRepository_branch=master
bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir
bamboo_repository_120946696_git_branch=master
bamboo_capability_system_git_executable=/usr/bin/git
bamboo_repository_git_username=
bamboo_planRepository_1_previousRevision=41c21decd56c8a967bf1fdb5d4d284f6b3b0de41
bamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13
bamboo_planRepository_branchDisplayName=master
bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs
bamboo_planRepository_1_type=bbserver
bamboo_planRepository_branchName=master
bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7
bamboo_capability_system_hostname=buildserver-1
bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66
bamboo_repository_120946696_name=extractors-dbpedia
bamboo_capability_system_software_mongo=/usr/bin/mongo
bamboo_plan_storageTag=plan-120750095
bamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache
bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs
bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl
bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66
bamboo_planRepository_1_username=
bamboo_planRepository_type=bbserver
bamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache
bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-dbpedia.git
bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node
bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4
bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9
bamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp
bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-EXDBP-JOB1
bamboo_planKey=CATS-EXDBP
bamboo_repository_120946696_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-dbpedia.git
bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-dbpedia.git
bamboo_planRepository_username=
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_planRepository_1_branchName=master
12-Jul-2018 13:59:42 Sending build context to Docker daemon  163.3kB
12-Jul-2018 13:59:42
12-Jul-2018 13:59:42 Step 1/13 : FROM clowder/pyclowder:2
12-Jul-2018 13:59:42 2: Pulling from clowder/pyclowder
12-Jul-2018 13:59:42 Digest: sha256:c7db6d13f3f9a1aa9c624dc4782470a230d37d2cdee737d45d556f8e8d8948b3
12-Jul-2018 13:59:42 Status: Image is up to date for clowder/pyclowder:2
12-Jul-2018 13:59:42 ---> b27d04debca2
12-Jul-2018 13:59:42 Step 2/13 : MAINTAINER Luigi Marigni <lmarini@illinois.edu>
12-Jul-2018 13:59:42 ---> Running in 6ee606c8c2d3
12-Jul-2018 13:59:44 Removing intermediate container 6ee606c8c2d3
12-Jul-2018 13:59:44 ---> 869b7c799368
12-Jul-2018 13:59:44 Step 3/13 : COPY requirements.txt /home/clowder/
12-Jul-2018 13:59:44 ---> 1d6cafd0bf05
12-Jul-2018 13:59:44 Step 4/13 : USER root
12-Jul-2018 13:59:44 ---> Running in db937f800980
12-Jul-2018 13:59:45 Removing intermediate container db937f800980
12-Jul-2018 13:59:45 ---> fd7bc49ad20e
12-Jul-2018 13:59:45 Step 5/13 : RUN apt-get update && apt-get -y install python-dev python-numpy gcc         && pip install -r /home/clowder/requirements.txt
12-Jul-2018 13:59:45 ---> Running in 9fc5f905e7a8
12-Jul-2018 13:59:46 Get:1 http://security.ubuntu.com/ubuntu xenial-security InRelease [107 kB]
12-Jul-2018 13:59:46 Get:2 http://archive.ubuntu.com/ubuntu xenial InRelease [247 kB]
12-Jul-2018 13:59:46 Get:3 http://security.ubuntu.com/ubuntu xenial-security/universe Sources [83.5 kB]
12-Jul-2018 13:59:46 Get:4 http://security.ubuntu.com/ubuntu xenial-security/main amd64 Packages [663 kB]
12-Jul-2018 13:59:46 Get:5 http://security.ubuntu.com/ubuntu xenial-security/restricted amd64 Packages [12.7 kB]
12-Jul-2018 13:59:46 Get:6 http://security.ubuntu.com/ubuntu xenial-security/universe amd64 Packages [453 kB]
12-Jul-2018 13:59:46 Get:7 http://security.ubuntu.com/ubuntu xenial-security/multiverse amd64 Packages [3735 B]
12-Jul-2018 13:59:47 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB]
12-Jul-2018 13:59:47 Get:9 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB]
12-Jul-2018 13:59:47 Get:10 http://archive.ubuntu.com/ubuntu xenial/universe Sources [9802 kB]
12-Jul-2018 13:59:47 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 Packages [1558 kB]
12-Jul-2018 13:59:47 Get:12 http://archive.ubuntu.com/ubuntu xenial/restricted amd64 Packages [14.1 kB]
12-Jul-2018 13:59:47 Get:13 http://archive.ubuntu.com/ubuntu xenial/universe amd64 Packages [9827 kB]
12-Jul-2018 13:59:48 Get:14 http://archive.ubuntu.com/ubuntu xenial/multiverse amd64 Packages [176 kB]
12-Jul-2018 13:59:48 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/universe Sources [260 kB]
12-Jul-2018 13:59:48 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 Packages [1040 kB]
12-Jul-2018 13:59:48 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/restricted amd64 Packages [13.1 kB]
12-Jul-2018 13:59:48 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 Packages [827 kB]
12-Jul-2018 13:59:48 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 Packages [18.8 kB]
12-Jul-2018 13:59:48 Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 Packages [7321 B]
12-Jul-2018 13:59:48 Get:21 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 Packages [8086 B]
12-Jul-2018 13:59:49 Fetched 25.3 MB in 3s (7814 kB/s)
12-Jul-2018 13:59:50 Reading package lists...
12-Jul-2018 13:59:51 Reading package lists...
12-Jul-2018 13:59:51 Building dependency tree...
12-Jul-2018 13:59:51 Reading state information...
12-Jul-2018 13:59:51 The following additional packages will be installed:
12-Jul-2018 13:59:51   binutils cpp cpp-5 gcc-5 gcc-5-base libasan2 libatomic1 libblas-common
12-Jul-2018 13:59:51   libblas3 libc-dev-bin libc6-dev libcc1-0 libcilkrts5 libexpat1-dev
12-Jul-2018 13:59:51   libgcc-5-dev libgfortran3 libgmp10 libgomp1 libisl15 libitm1 liblapack3
12-Jul-2018 13:59:51   liblsan0 libmpc3 libmpfr4 libmpx0 libpython-dev libpython2.7
12-Jul-2018 13:59:51   libpython2.7-dev libquadmath0 libstdc++6 libtsan0 libubsan0 linux-libc-dev
12-Jul-2018 13:59:51   manpages manpages-dev python2.7-dev
12-Jul-2018 13:59:51 Suggested packages:
12-Jul-2018 13:59:51   binutils-doc cpp-doc gcc-5-locales gcc-multilib make autoconf automake
12-Jul-2018 13:59:51   libtool flex bison gdb gcc-doc gcc-5-multilib gcc-5-doc libgcc1-dbg
12-Jul-2018 13:59:51   libgomp1-dbg libitm1-dbg libatomic1-dbg libasan2-dbg liblsan0-dbg
12-Jul-2018 13:59:51   libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx0-dbg libquadmath0-dbg
12-Jul-2018 13:59:51   glibc-doc man-browser gfortran python-nose python-numpy-dbg python-numpy-doc
12-Jul-2018 13:59:51 The following NEW packages will be installed:
12-Jul-2018 13:59:51   binutils cpp cpp-5 gcc gcc-5 libasan2 libatomic1 libblas-common libblas3
12-Jul-2018 13:59:51   libc-dev-bin libc6-dev libcc1-0 libcilkrts5 libexpat1-dev libgcc-5-dev
12-Jul-2018 13:59:51   libgfortran3 libgmp10 libgomp1 libisl15 libitm1 liblapack3 liblsan0 libmpc3
12-Jul-2018 13:59:51   libmpfr4 libmpx0 libpython-dev libpython2.7 libpython2.7-dev libquadmath0
12-Jul-2018 13:59:51   libtsan0 libubsan0 linux-libc-dev manpages manpages-dev python-dev
12-Jul-2018 13:59:51   python-numpy python2.7-dev
12-Jul-2018 13:59:51 The following packages will be upgraded:
12-Jul-2018 13:59:51   gcc-5-base libstdc++6
12-Jul-2018 13:59:51 2 upgraded, 37 newly installed, 0 to remove and 6 not upgraded.
12-Jul-2018 13:59:51 Need to get 62.6 MB of archives.
12-Jul-2018 13:59:51 After this operation, 166 MB of additional disk space will be used.
12-Jul-2018 13:59:51 Get:1 http://archive.ubuntu.com/ubuntu xenial/main amd64 libgmp10 amd64 2:6.1.0+dfsg-2 [240 kB]
12-Jul-2018 13:59:52 Get:2 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpfr4 amd64 3.1.4-1 [191 kB]
12-Jul-2018 13:59:52 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 libmpc3 amd64 1.0.3-1 [39.7 kB]
12-Jul-2018 13:59:52 Get:4 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5-base amd64 5.4.0-6ubuntu1~16.04.10 [17.3 kB]
12-Jul-2018 13:59:52 Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libstdc++6 amd64 5.4.0-6ubuntu1~16.04.10 [393 kB]
12-Jul-2018 13:59:52 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 manpages all 4.04-2 [1087 kB]
12-Jul-2018 13:59:52 Get:7 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 binutils amd64 2.26.1-1ubuntu1~16.04.6 [2311 kB]
12-Jul-2018 13:59:52 Get:8 http://archive.ubuntu.com/ubuntu xenial/main amd64 libisl15 amd64 0.16.1-1 [524 kB]
12-Jul-2018 13:59:52 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 cpp-5 amd64 5.4.0-6ubuntu1~16.04.10 [7671 kB]
12-Jul-2018 13:59:53 Get:10 http://archive.ubuntu.com/ubuntu xenial/main amd64 cpp amd64 4:5.3.1-1ubuntu1 [27.7 kB]
12-Jul-2018 13:59:53 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcc1-0 amd64 5.4.0-6ubuntu1~16.04.10 [38.8 kB]
12-Jul-2018 13:59:53 Get:12 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgomp1 amd64 5.4.0-6ubuntu1~16.04.10 [55.1 kB]
12-Jul-2018 13:59:53 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libitm1 amd64 5.4.0-6ubuntu1~16.04.10 [27.4 kB]
12-Jul-2018 13:59:53 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libatomic1 amd64 5.4.0-6ubuntu1~16.04.10 [8888 B]
12-Jul-2018 13:59:53 Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libasan2 amd64 5.4.0-6ubuntu1~16.04.10 [264 kB]
12-Jul-2018 13:59:53 Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 liblsan0 amd64 5.4.0-6ubuntu1~16.04.10 [105 kB]
12-Jul-2018 13:59:53 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libtsan0 amd64 5.4.0-6ubuntu1~16.04.10 [244 kB]
12-Jul-2018 13:59:53 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libubsan0 amd64 5.4.0-6ubuntu1~16.04.10 [95.3 kB]
12-Jul-2018 13:59:53 Get:19 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libcilkrts5 amd64 5.4.0-6ubuntu1~16.04.10 [40.1 kB]
12-Jul-2018 13:59:53 Get:20 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libmpx0 amd64 5.4.0-6ubuntu1~16.04.10 [9764 B]
12-Jul-2018 13:59:53 Get:21 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libquadmath0 amd64 5.4.0-6ubuntu1~16.04.10 [131 kB]
12-Jul-2018 13:59:53 Get:22 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgcc-5-dev amd64 5.4.0-6ubuntu1~16.04.10 [2228 kB]
12-Jul-2018 13:59:53 Get:23 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 gcc-5 amd64 5.4.0-6ubuntu1~16.04.10 [8426 kB]
12-Jul-2018 13:59:53 Get:24 http://archive.ubuntu.com/ubuntu xenial/main amd64 gcc amd64 4:5.3.1-1ubuntu1 [5244 B]
12-Jul-2018 13:59:53 Get:25 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas-common amd64 3.6.0-2ubuntu2 [5342 B]
12-Jul-2018 13:59:53 Get:26 http://archive.ubuntu.com/ubuntu xenial/main amd64 libblas3 amd64 3.6.0-2ubuntu2 [147 kB]
12-Jul-2018 13:59:53 Get:27 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc-dev-bin amd64 2.23-0ubuntu10 [68.7 kB]
12-Jul-2018 13:59:53 Get:28 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 linux-libc-dev amd64 4.4.0-130.156 [866 kB]
12-Jul-2018 13:59:53 Get:29 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libc6-dev amd64 2.23-0ubuntu10 [2079 kB]
12-Jul-2018 13:59:54 Get:30 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1-dev amd64 2.1.0-7ubuntu0.16.04.3 [115 kB]
12-Jul-2018 13:59:54 Get:31 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libgfortran3 amd64 5.4.0-6ubuntu1~16.04.10 [260 kB]
12-Jul-2018 13:59:54 Get:32 http://archive.ubuntu.com/ubuntu xenial/main amd64 liblapack3 amd64 3.6.0-2ubuntu2 [1938 kB]
12-Jul-2018 13:59:54 Get:33 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7 amd64 2.7.12-1ubuntu0~16.04.3 [1070 kB]
12-Jul-2018 13:59:54 Get:34 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-dev amd64 2.7.12-1ubuntu0~16.04.3 [27.8 MB]
12-Jul-2018 13:59:55 Get:35 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython-dev amd64 2.7.12-1~16.04 [7840 B]
12-Jul-2018 13:59:55 Get:36 http://archive.ubuntu.com/ubuntu xenial/main amd64 manpages-dev all 4.04-2 [2048 kB]
12-Jul-2018 13:59:55 Get:37 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7-dev amd64 2.7.12-1ubuntu0~16.04.3 [276 kB]
12-Jul-2018 13:59:55 Get:38 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-dev amd64 2.7.12-1~16.04 [1186 B]
12-Jul-2018 13:59:55 Get:39 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-numpy amd64 1:1.11.0-1ubuntu1 [1763 kB]
12-Jul-2018 13:59:55 debconf: delaying package configuration, since apt-utils is not installed
12-Jul-2018 13:59:55 Fetched 62.6 MB in 3s (16.9 MB/s)
12-Jul-2018 13:59:56 Selecting previously unselected package libgmp10:amd64.
12-Jul-2018 13:59:56 (Reading database ...
12-Jul-2018 13:59:56 (Reading database ... 5%
12-Jul-2018 13:59:56 (Reading database ... 10%
12-Jul-2018 13:59:56 (Reading database ... 15%
12-Jul-2018 13:59:56 (Reading database ... 20%
12-Jul-2018 13:59:56 (Reading database ... 25%
12-Jul-2018 13:59:56 (Reading database ... 30%
12-Jul-2018 13:59:56 (Reading database ... 35%
12-Jul-2018 13:59:56 (Reading database ... 40%
12-Jul-2018 13:59:56 (Reading database ... 45%
12-Jul-2018 13:59:56 (Reading database ... 50%
12-Jul-2018 13:59:56 (Reading database ... 55%
12-Jul-2018 13:59:56 (Reading database ... 60%
12-Jul-2018 13:59:56 (Reading database ... 65%
12-Jul-2018 13:59:56 (Reading database ... 70%
12-Jul-2018 13:59:56 (Reading database ... 75%
12-Jul-2018 13:59:56 (Reading database ... 80%
12-Jul-2018 13:59:56 (Reading database ... 85%
12-Jul-2018 13:59:56 (Reading database ... 90%
12-Jul-2018 13:59:56 (Reading database ... 95%
12-Jul-2018 13:59:56 (Reading database ... 100%
12-Jul-2018 13:59:56 (Reading database ... 6036 files and directories currently installed.)
12-Jul-2018 13:59:56 Preparing to unpack .../libgmp10_2%3a6.1.0+dfsg-2_amd64.deb ...
12-Jul-2018 13:59:56 Unpacking libgmp10:amd64 (2:6.1.0+dfsg-2) ...
12-Jul-2018 13:59:57 Selecting previously unselected package libmpfr4:amd64.
12-Jul-2018 13:59:57 Preparing to unpack .../libmpfr4_3.1.4-1_amd64.deb ...
12-Jul-2018 13:59:57 Unpacking libmpfr4:amd64 (3.1.4-1) ...
12-Jul-2018 13:59:58 Selecting previously unselected package libmpc3:amd64.
12-Jul-2018 13:59:58 Preparing to unpack .../libmpc3_1.0.3-1_amd64.deb ...
12-Jul-2018 13:59:58 Unpacking libmpc3:amd64 (1.0.3-1) ...
12-Jul-2018 13:59:59 Preparing to unpack .../gcc-5-base_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 13:59:59 Unpacking gcc-5-base:amd64 (5.4.0-6ubuntu1~16.04.10) over (5.4.0-6ubuntu1~16.04.9) ...
12-Jul-2018 14:00:00 Processing triggers for libc-bin (2.23-0ubuntu10) ...
12-Jul-2018 14:00:01 Setting up gcc-5-base:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:01 (Reading database ...
12-Jul-2018 14:00:01 (Reading database ... 5%
12-Jul-2018 14:00:01 (Reading database ... 10%
12-Jul-2018 14:00:01 (Reading database ... 15%
12-Jul-2018 14:00:01 (Reading database ... 20%
12-Jul-2018 14:00:01 (Reading database ... 25%
12-Jul-2018 14:00:01 (Reading database ... 30%
12-Jul-2018 14:00:01 (Reading database ... 35%
12-Jul-2018 14:00:01 (Reading database ... 40%
12-Jul-2018 14:00:01 (Reading database ... 45%
12-Jul-2018 14:00:01 (Reading database ... 50%
12-Jul-2018 14:00:01 (Reading database ... 55%
12-Jul-2018 14:00:01 (Reading database ... 60%
12-Jul-2018 14:00:01 (Reading database ... 65%
12-Jul-2018 14:00:01 (Reading database ... 70%
12-Jul-2018 14:00:01 (Reading database ... 75%
12-Jul-2018 14:00:01 (Reading database ... 80%
12-Jul-2018 14:00:01 (Reading database ... 85%
12-Jul-2018 14:00:01 (Reading database ... 90%
12-Jul-2018 14:00:01 (Reading database ... 95%
12-Jul-2018 14:00:01 (Reading database ... 100%
12-Jul-2018 14:00:01 (Reading database ... 6058 files and directories currently installed.)
12-Jul-2018 14:00:01 Preparing to unpack .../libstdc++6_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:01 Unpacking libstdc++6:amd64 (5.4.0-6ubuntu1~16.04.10) over (5.4.0-6ubuntu1~16.04.9) ...
12-Jul-2018 14:00:02 Processing triggers for libc-bin (2.23-0ubuntu10) ...
12-Jul-2018 14:00:02 Setting up libstdc++6:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:03 Processing triggers for libc-bin (2.23-0ubuntu10) ...
12-Jul-2018 14:00:03 Selecting previously unselected package manpages.
12-Jul-2018 14:00:03 (Reading database ...
12-Jul-2018 14:00:03 (Reading database ... 5%
12-Jul-2018 14:00:03 (Reading database ... 10%
12-Jul-2018 14:00:03 (Reading database ... 15%
12-Jul-2018 14:00:03 (Reading database ... 20%
12-Jul-2018 14:00:03 (Reading database ... 25%
12-Jul-2018 14:00:03 (Reading database ... 30%
12-Jul-2018 14:00:03 (Reading database ... 35%
12-Jul-2018 14:00:03 (Reading database ... 40%
12-Jul-2018 14:00:03 (Reading database ... 45%
12-Jul-2018 14:00:03 (Reading database ... 50%
12-Jul-2018 14:00:03 (Reading database ... 55%
12-Jul-2018 14:00:03 (Reading database ... 60%
12-Jul-2018 14:00:03 (Reading database ... 65%
12-Jul-2018 14:00:03 (Reading database ... 70%
12-Jul-2018 14:00:03 (Reading database ... 75%
12-Jul-2018 14:00:03 (Reading database ... 80%
12-Jul-2018 14:00:03 (Reading database ... 85%
12-Jul-2018 14:00:03 (Reading database ... 90%
12-Jul-2018 14:00:03 (Reading database ... 95%
12-Jul-2018 14:00:03 (Reading database ... 100%
12-Jul-2018 14:00:03 (Reading database ... 6058 files and directories currently installed.)
12-Jul-2018 14:00:03 Preparing to unpack .../manpages_4.04-2_all.deb ...
12-Jul-2018 14:00:03 Unpacking manpages (4.04-2) ...
12-Jul-2018 14:00:04 Selecting previously unselected package binutils.
12-Jul-2018 14:00:04 Preparing to unpack .../binutils_2.26.1-1ubuntu1~16.04.6_amd64.deb ...
12-Jul-2018 14:00:05 Unpacking binutils (2.26.1-1ubuntu1~16.04.6) ...
12-Jul-2018 14:00:06 Selecting previously unselected package libisl15:amd64.
12-Jul-2018 14:00:06 Preparing to unpack .../libisl15_0.16.1-1_amd64.deb ...
12-Jul-2018 14:00:06 Unpacking libisl15:amd64 (0.16.1-1) ...
12-Jul-2018 14:00:06 Selecting previously unselected package cpp-5.
12-Jul-2018 14:00:06 Preparing to unpack .../cpp-5_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:06 Unpacking cpp-5 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:08 Selecting previously unselected package cpp.
12-Jul-2018 14:00:08 Preparing to unpack .../cpp_4%3a5.3.1-1ubuntu1_amd64.deb ...
12-Jul-2018 14:00:08 Unpacking cpp (4:5.3.1-1ubuntu1) ...
12-Jul-2018 14:00:09 Selecting previously unselected package libcc1-0:amd64.
12-Jul-2018 14:00:09 Preparing to unpack .../libcc1-0_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:09 Unpacking libcc1-0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:09 Selecting previously unselected package libgomp1:amd64.
12-Jul-2018 14:00:09 Preparing to unpack .../libgomp1_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:10 Unpacking libgomp1:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:10 Selecting previously unselected package libitm1:amd64.
12-Jul-2018 14:00:10 Preparing to unpack .../libitm1_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:10 Unpacking libitm1:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:10 Selecting previously unselected package libatomic1:amd64.
12-Jul-2018 14:00:10 Preparing to unpack .../libatomic1_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:10 Unpacking libatomic1:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:12 Selecting previously unselected package libasan2:amd64.
12-Jul-2018 14:00:12 Preparing to unpack .../libasan2_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:12 Unpacking libasan2:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:13 Selecting previously unselected package liblsan0:amd64.
12-Jul-2018 14:00:13 Preparing to unpack .../liblsan0_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:13 Unpacking liblsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:14 Selecting previously unselected package libtsan0:amd64.
12-Jul-2018 14:00:14 Preparing to unpack .../libtsan0_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:14 Unpacking libtsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:14 Selecting previously unselected package libubsan0:amd64.
12-Jul-2018 14:00:14 Preparing to unpack .../libubsan0_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:14 Unpacking libubsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:15 Selecting previously unselected package libcilkrts5:amd64.
12-Jul-2018 14:00:15 Preparing to unpack .../libcilkrts5_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:15 Unpacking libcilkrts5:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:15 Selecting previously unselected package libmpx0:amd64.
12-Jul-2018 14:00:15 Preparing to unpack .../libmpx0_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:15 Unpacking libmpx0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:16 Selecting previously unselected package libquadmath0:amd64.
12-Jul-2018 14:00:16 Preparing to unpack .../libquadmath0_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:16 Unpacking libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:16 Selecting previously unselected package libgcc-5-dev:amd64.
12-Jul-2018 14:00:16 Preparing to unpack .../libgcc-5-dev_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:16 Unpacking libgcc-5-dev:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:18 Selecting previously unselected package gcc-5.
12-Jul-2018 14:00:18 Preparing to unpack .../gcc-5_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:18 Unpacking gcc-5 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:20 Selecting previously unselected package gcc.
12-Jul-2018 14:00:20 Preparing to unpack .../gcc_4%3a5.3.1-1ubuntu1_amd64.deb ...
12-Jul-2018 14:00:20 Unpacking gcc (4:5.3.1-1ubuntu1) ...
12-Jul-2018 14:00:20 Selecting previously unselected package libblas-common.
12-Jul-2018 14:00:20 Preparing to unpack .../libblas-common_3.6.0-2ubuntu2_amd64.deb ...
12-Jul-2018 14:00:21 Unpacking libblas-common (3.6.0-2ubuntu2) ...
12-Jul-2018 14:00:22 Selecting previously unselected package libblas3.
12-Jul-2018 14:00:22 Preparing to unpack .../libblas3_3.6.0-2ubuntu2_amd64.deb ...
12-Jul-2018 14:00:22 Unpacking libblas3 (3.6.0-2ubuntu2) ...
12-Jul-2018 14:00:22 Selecting previously unselected package libc-dev-bin.
12-Jul-2018 14:00:23 Preparing to unpack .../libc-dev-bin_2.23-0ubuntu10_amd64.deb ...
12-Jul-2018 14:00:23 Unpacking libc-dev-bin (2.23-0ubuntu10) ...
12-Jul-2018 14:00:23 Selecting previously unselected package linux-libc-dev:amd64.
12-Jul-2018 14:00:23 Preparing to unpack .../linux-libc-dev_4.4.0-130.156_amd64.deb ...
12-Jul-2018 14:00:23 Unpacking linux-libc-dev:amd64 (4.4.0-130.156) ...
12-Jul-2018 14:00:24 Selecting previously unselected package libc6-dev:amd64.
12-Jul-2018 14:00:24 Preparing to unpack .../libc6-dev_2.23-0ubuntu10_amd64.deb ...
12-Jul-2018 14:00:24 Unpacking libc6-dev:amd64 (2.23-0ubuntu10) ...
12-Jul-2018 14:00:25 Selecting previously unselected package libexpat1-dev:amd64.
12-Jul-2018 14:00:25 Preparing to unpack .../libexpat1-dev_2.1.0-7ubuntu0.16.04.3_amd64.deb ...
12-Jul-2018 14:00:25 Unpacking libexpat1-dev:amd64 (2.1.0-7ubuntu0.16.04.3) ...
12-Jul-2018 14:00:26 Selecting previously unselected package libgfortran3:amd64.
12-Jul-2018 14:00:26 Preparing to unpack .../libgfortran3_5.4.0-6ubuntu1~16.04.10_amd64.deb ...
12-Jul-2018 14:00:26 Unpacking libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:27 Selecting previously unselected package liblapack3.
12-Jul-2018 14:00:27 Preparing to unpack .../liblapack3_3.6.0-2ubuntu2_amd64.deb ...
12-Jul-2018 14:00:27 Unpacking liblapack3 (3.6.0-2ubuntu2) ...
12-Jul-2018 14:00:28 Selecting previously unselected package libpython2.7:amd64.
12-Jul-2018 14:00:28 Preparing to unpack .../libpython2.7_2.7.12-1ubuntu0~16.04.3_amd64.deb ...
12-Jul-2018 14:00:28 Unpacking libpython2.7:amd64 (2.7.12-1ubuntu0~16.04.3) ...
12-Jul-2018 14:00:29 Selecting previously unselected package libpython2.7-dev:amd64.
12-Jul-2018 14:00:29 Preparing to unpack .../libpython2.7-dev_2.7.12-1ubuntu0~16.04.3_amd64.deb ...
12-Jul-2018 14:00:29 Unpacking libpython2.7-dev:amd64 (2.7.12-1ubuntu0~16.04.3) ...
12-Jul-2018 14:00:32 Selecting previously unselected package libpython-dev:amd64.
12-Jul-2018 14:00:32 Preparing to unpack .../libpython-dev_2.7.12-1~16.04_amd64.deb ...
12-Jul-2018 14:00:32 Unpacking libpython-dev:amd64 (2.7.12-1~16.04) ...
12-Jul-2018 14:00:32 Selecting previously unselected package manpages-dev.
12-Jul-2018 14:00:32 Preparing to unpack .../manpages-dev_4.04-2_all.deb ...
12-Jul-2018 14:00:32 Unpacking manpages-dev (4.04-2) ...
12-Jul-2018 14:00:33 Selecting previously unselected package python2.7-dev.
12-Jul-2018 14:00:33 Preparing to unpack .../python2.7-dev_2.7.12-1ubuntu0~16.04.3_amd64.deb ...
12-Jul-2018 14:00:33 Unpacking python2.7-dev (2.7.12-1ubuntu0~16.04.3) ...
12-Jul-2018 14:00:33 Selecting previously unselected package python-dev.
12-Jul-2018 14:00:33 Preparing to unpack .../python-dev_2.7.12-1~16.04_amd64.deb ...
12-Jul-2018 14:00:34 Unpacking python-dev (2.7.12-1~16.04) ...
12-Jul-2018 14:00:35 Selecting previously unselected package python-numpy.
12-Jul-2018 14:00:35 Preparing to unpack .../python-numpy_1%3a1.11.0-1ubuntu1_amd64.deb ...
12-Jul-2018 14:00:35 Unpacking python-numpy (1:1.11.0-1ubuntu1) ...
12-Jul-2018 14:00:36 Processing triggers for libc-bin (2.23-0ubuntu10) ...
12-Jul-2018 14:00:36 Setting up libgmp10:amd64 (2:6.1.0+dfsg-2) ...
12-Jul-2018 14:00:36 Setting up libmpfr4:amd64 (3.1.4-1) ...
12-Jul-2018 14:00:37 Setting up libmpc3:amd64 (1.0.3-1) ...
12-Jul-2018 14:00:37 Setting up manpages (4.04-2) ...
12-Jul-2018 14:00:38 Setting up binutils (2.26.1-1ubuntu1~16.04.6) ...
12-Jul-2018 14:00:38 Setting up libisl15:amd64 (0.16.1-1) ...
12-Jul-2018 14:00:38 Setting up cpp-5 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:39 Setting up cpp (4:5.3.1-1ubuntu1) ...
12-Jul-2018 14:00:39 Setting up libcc1-0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:39 Setting up libgomp1:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:39 Setting up libitm1:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:40 Setting up libatomic1:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:40 Setting up libasan2:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:40 Setting up liblsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:40 Setting up libtsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:41 Setting up libubsan0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:41 Setting up libcilkrts5:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:41 Setting up libmpx0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:42 Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:42 Setting up libgcc-5-dev:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:43 Setting up gcc-5 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:43 Setting up gcc (4:5.3.1-1ubuntu1) ...
12-Jul-2018 14:00:43 Setting up libblas-common (3.6.0-2ubuntu2) ...
12-Jul-2018 14:00:43 Setting up libblas3 (3.6.0-2ubuntu2) ...
12-Jul-2018 14:00:44 update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
12-Jul-2018 14:00:44 Setting up libc-dev-bin (2.23-0ubuntu10) ...
12-Jul-2018 14:00:44 Setting up linux-libc-dev:amd64 (4.4.0-130.156) ...
12-Jul-2018 14:00:44 Setting up libc6-dev:amd64 (2.23-0ubuntu10) ...
12-Jul-2018 14:00:44 Setting up libexpat1-dev:amd64 (2.1.0-7ubuntu0.16.04.3) ...
12-Jul-2018 14:00:45 Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.10) ...
12-Jul-2018 14:00:45 Setting up liblapack3 (3.6.0-2ubuntu2) ...
12-Jul-2018 14:00:45 update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
12-Jul-2018 14:00:45 Setting up libpython2.7:amd64 (2.7.12-1ubuntu0~16.04.3) ...
12-Jul-2018 14:00:46 Setting up libpython2.7-dev:amd64 (2.7.12-1ubuntu0~16.04.3) ...
12-Jul-2018 14:00:46 Setting up libpython-dev:amd64 (2.7.12-1~16.04) ...
12-Jul-2018 14:00:47 Setting up manpages-dev (4.04-2) ...
12-Jul-2018 14:00:47 Setting up python2.7-dev (2.7.12-1ubuntu0~16.04.3) ...
12-Jul-2018 14:00:47 Setting up python-dev (2.7.12-1~16.04) ...
12-Jul-2018 14:00:47 Setting up python-numpy (1:1.11.0-1ubuntu1) ...
12-Jul-2018 14:00:49 Processing triggers for libc-bin (2.23-0ubuntu10) ...
12-Jul-2018 14:00:51 Collecting Flask==0.10.1 (from -r /home/clowder/requirements.txt (line 1))
12-Jul-2018 14:00:51   Downloading https://files.pythonhosted.org/packages/db/9c/149ba60c47d107f85fe52564133348458f093dd5e6b57a5b60ab9ac517bb/Flask-0.10.1.tar.gz (544kB)
12-Jul-2018 14:00:51 Collecting html5lib==0.99999 (from -r /home/clowder/requirements.txt (line 2))
12-Jul-2018 14:00:51   Downloading https://files.pythonhosted.org/packages/0d/0f/6e7a4171c150e4c52cff10184697a63dd9eaeae5c7b7f5023ef6b16aaf59/html5lib-0.99999.tar.gz (887kB)
12-Jul-2018 14:00:52 Collecting isodate==0.5.1 (from -r /home/clowder/requirements.txt (line 3))
12-Jul-2018 14:00:52   Downloading https://files.pythonhosted.org/packages/4a/98/07f5bb685219005c3a5788ebe492561c44a75d6b690446667ab508ef070d/isodate-0.5.1.tar.gz
12-Jul-2018 14:00:52 Collecting itsdangerous==0.24 (from -r /home/clowder/requirements.txt (line 4))
12-Jul-2018 14:00:52   Downloading https://files.pythonhosted.org/packages/dc/b4/a60bcdba945c00f6d608d8975131ab3f25b22f2bcfe1dab221165194b2d4/itsdangerous-0.24.tar.gz (46kB)
12-Jul-2018 14:00:52 Collecting Jinja2==2.7.3 (from -r /home/clowder/requirements.txt (line 5))
12-Jul-2018 14:00:52   Downloading https://files.pythonhosted.org/packages/b0/73/eab0bca302d6d6a0b5c402f47ad1760dc9cb2dd14bbc1873ad48db258e4d/Jinja2-2.7.3.tar.gz (378kB)
12-Jul-2018 14:00:52 Collecting MarkupSafe==0.23 (from -r /home/clowder/requirements.txt (line 6))
12-Jul-2018 14:00:52   Downloading https://files.pythonhosted.org/packages/c0/41/bae1254e0396c0cc8cf1751cb7d9afc90a602353695af5952530482c963f/MarkupSafe-0.23.tar.gz
12-Jul-2018 14:00:53 Collecting nltk==3.0.3 (from -r /home/clowder/requirements.txt (line 7))
12-Jul-2018 14:00:53   Downloading https://files.pythonhosted.org/packages/69/3e/b5e0e0210931539a3f77e0537e2e462b929b019a723895bd69357ad20bc3/nltk-3.0.3.tar.gz (1.0MB)
12-Jul-2018 14:00:53 Collecting pika==0.10.0 (from -r /home/clowder/requirements.txt (line 9))
12-Jul-2018 14:00:53   Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB)
12-Jul-2018 14:00:53 Collecting pyparsing==2.0.3 (from -r /home/clowder/requirements.txt (line 11))
12-Jul-2018 14:00:53   Downloading https://files.pythonhosted.org/packages/8f/f4/3a70b5e5b865b1ec45fe48dc5a57cd4facb5c7bd80e5cb1255c362732e81/pyparsing-2.0.3-py2.py3-none-any.whl
12-Jul-2018 14:00:53 Collecting rdflib==4.2.0 (from -r /home/clowder/requirements.txt (line 12))
12-Jul-2018 14:00:53   Downloading https://files.pythonhosted.org/packages/23/13/cb881e853fa0ed79e35dbd527a98cb986c3e0d5fae8ebfdb6ef3cffb6298/rdflib-4.2.0.tar.gz (881kB)
12-Jul-2018 14:00:54 Collecting requests==2.7.0 (from -r /home/clowder/requirements.txt (line 13))
12-Jul-2018 14:00:55   Downloading https://files.pythonhosted.org/packages/26/ff/c71b3943bebdd9f7ceb9e137296370587eb0b33fe2eb3732ae168bc45204/requests-2.7.0-py2.py3-none-any.whl (470kB)
12-Jul-2018 14:00:55 Collecting six==1.9.0 (from -r /home/clowder/requirements.txt (line 14))
12-Jul-2018 14:00:55   Downloading https://files.pythonhosted.org/packages/10/e3/a7f8eea80a9fa8358c1cd89ef489bc03675e69e54ed2982cd6f2a28d8295/six-1.9.0-py2.py3-none-any.whl
12-Jul-2018 14:00:55 Collecting SPARQLWrapper==1.6.4 (from -r /home/clowder/requirements.txt (line 15))
12-Jul-2018 14:00:55   Downloading https://files.pythonhosted.org/packages/6b/07/751e164e2e5debc18eb92fbe0798a62d668af8801c8adf38b6f32bcc5eed/SPARQLWrapper-1.6.4.tar.gz
12-Jul-2018 14:00:55 Collecting Werkzeug==0.10.4 (from -r /home/clowder/requirements.txt (line 16))
12-Jul-2018 14:00:55   Downloading https://files.pythonhosted.org/packages/49/0c/e33c2caec86a7926186f7d454f6a901f45f05ad90337c6972d170b9ee806/Werkzeug-0.10.4-py2.py3-none-any.whl (293kB)
12-Jul-2018 14:00:55 Collecting wheel==0.24.0 (from -r /home/clowder/requirements.txt (line 17))
12-Jul-2018 14:00:55   Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB)
12-Jul-2018 14:00:55 Building wheels for collected packages: Flask, html5lib, isodate, itsdangerous, Jinja2, MarkupSafe, nltk, rdflib, SPARQLWrapper
12-Jul-2018 14:00:55   Running setup.py bdist_wheel for Flask: started
12-Jul-2018 14:00:55   Running setup.py bdist_wheel for Flask: finished with status 'error'
12-Jul-2018 14:00:55   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-kQZZ_u/Flask/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpa631WFpip-wheel- --python-tag cp27:
12-Jul-2018 14:00:55   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
12-Jul-2018 14:00:55      or: -c --help [cmd1 cmd2 ...]
12-Jul-2018 14:00:55      or: -c --help-commands
12-Jul-2018 14:00:55      or: -c cmd --help
12-Jul-2018 14:00:55  
12-Jul-2018 14:00:55   error: invalid command 'bdist_wheel'
12-Jul-2018 14:00:55  
12-Jul-2018 14:00:55   ----------------------------------------
12-Jul-2018 14:00:55   Failed building wheel for Flask
12-Jul-2018 14:00:55   Running setup.py clean for Flask
12-Jul-2018 14:00:55   Running setup.py bdist_wheel for html5lib: started
12-Jul-2018 14:00:56   Running setup.py bdist_wheel for html5lib: finished with status 'error'
12-Jul-2018 14:00:56   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-kQZZ_u/html5lib/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpN1vxEspip-wheel- --python-tag cp27:
12-Jul-2018 14:00:56   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
12-Jul-2018 14:00:56      or: -c --help [cmd1 cmd2 ...]
12-Jul-2018 14:00:56      or: -c --help-commands
12-Jul-2018 14:00:56      or: -c cmd --help
12-Jul-2018 14:00:56  
12-Jul-2018 14:00:56   error: invalid command 'bdist_wheel'
12-Jul-2018 14:00:56  
12-Jul-2018 14:00:56   ----------------------------------------
12-Jul-2018 14:00:56   Failed building wheel for html5lib
12-Jul-2018 14:00:56   Running setup.py clean for html5lib
12-Jul-2018 14:00:56   Running setup.py bdist_wheel for isodate: started
12-Jul-2018 14:00:56   Running setup.py bdist_wheel for isodate: finished with status 'error'
12-Jul-2018 14:00:56   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-kQZZ_u/isodate/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmp2_LJ82pip-wheel- --python-tag cp27:
12-Jul-2018 14:00:56   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
12-Jul-2018 14:00:56      or: -c --help [cmd1 cmd2 ...]
12-Jul-2018 14:00:56      or: -c --help-commands
12-Jul-2018 14:00:56      or: -c cmd --help
12-Jul-2018 14:00:56  
12-Jul-2018 14:00:56   error: invalid command 'bdist_wheel'
12-Jul-2018 14:00:56  
12-Jul-2018 14:00:56   ----------------------------------------
12-Jul-2018 14:00:56   Failed building wheel for isodate
12-Jul-2018 14:00:56   Running setup.py clean for isodate
12-Jul-2018 14:00:56   Running setup.py bdist_wheel for itsdangerous: started
12-Jul-2018 14:00:56   Running setup.py bdist_wheel for itsdangerous: finished with status 'error'
12-Jul-2018 14:00:56   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-kQZZ_u/itsdangerous/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpCcPuyppip-wheel- --python-tag cp27:
12-Jul-2018 14:00:56   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
12-Jul-2018 14:00:56      or: -c --help [cmd1 cmd2 ...]
12-Jul-2018 14:00:56      or: -c --help-commands
12-Jul-2018 14:00:56      or: -c cmd --help
12-Jul-2018 14:00:56  
12-Jul-2018 14:00:56   error: invalid command 'bdist_wheel'
12-Jul-2018 14:00:56  
12-Jul-2018 14:00:56   ----------------------------------------
12-Jul-2018 14:00:56   Failed building wheel for itsdangerous
12-Jul-2018 14:00:56   Running setup.py clean for itsdangerous
12-Jul-2018 14:00:56   Running setup.py bdist_wheel for Jinja2: started
12-Jul-2018 14:00:56   Running setup.py bdist_wheel for Jinja2: finished with status 'error'
12-Jul-2018 14:00:56   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-kQZZ_u/Jinja2/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpVUdzV7pip-wheel- --python-tag cp27:
12-Jul-2018 14:00:56   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
12-Jul-2018 14:00:56      or: -c --help [cmd1 cmd2 ...]
12-Jul-2018 14:00:56      or: -c --help-commands
12-Jul-2018 14:00:56      or: -c cmd --help
12-Jul-2018 14:00:56  
12-Jul-2018 14:00:56   error: invalid command 'bdist_wheel'
12-Jul-2018 14:00:56  
12-Jul-2018 14:00:56   ----------------------------------------
12-Jul-2018 14:00:56   Failed building wheel for Jinja2
12-Jul-2018 14:00:56   Running setup.py clean for Jinja2
12-Jul-2018 14:00:56   Running setup.py bdist_wheel for MarkupSafe: started
12-Jul-2018 14:00:57   Running setup.py bdist_wheel for MarkupSafe: finished with status 'error'
12-Jul-2018 14:00:57   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-kQZZ_u/MarkupSafe/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpMbJYk0pip-wheel- --python-tag cp27:
12-Jul-2018 14:00:57   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
12-Jul-2018 14:00:57      or: -c --help [cmd1 cmd2 ...]
12-Jul-2018 14:00:57      or: -c --help-commands
12-Jul-2018 14:00:57      or: -c cmd --help
12-Jul-2018 14:00:57  
12-Jul-2018 14:00:57   error: invalid command 'bdist_wheel'
12-Jul-2018 14:00:57  
12-Jul-2018 14:00:57   ----------------------------------------
12-Jul-2018 14:00:57   Failed building wheel for MarkupSafe
12-Jul-2018 14:00:57   Running setup.py clean for MarkupSafe
12-Jul-2018 14:00:57   Running setup.py bdist_wheel for nltk: started
12-Jul-2018 14:00:57   Running setup.py bdist_wheel for nltk: finished with status 'error'
12-Jul-2018 14:00:57   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-kQZZ_u/nltk/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpaYtBzGpip-wheel- --python-tag cp27:
12-Jul-2018 14:00:57   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
12-Jul-2018 14:00:57      or: -c --help [cmd1 cmd2 ...]
12-Jul-2018 14:00:57      or: -c --help-commands
12-Jul-2018 14:00:57      or: -c cmd --help
12-Jul-2018 14:00:57  
12-Jul-2018 14:00:57   error: invalid command 'bdist_wheel'
12-Jul-2018 14:00:57  
12-Jul-2018 14:00:57   ----------------------------------------
12-Jul-2018 14:00:57   Failed building wheel for nltk
12-Jul-2018 14:00:57   Running setup.py clean for nltk
12-Jul-2018 14:00:57   Running setup.py bdist_wheel for rdflib: started
12-Jul-2018 14:00:57   Running setup.py bdist_wheel for rdflib: finished with status 'error'
12-Jul-2018 14:00:57   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-kQZZ_u/rdflib/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpLZZGq6pip-wheel- --python-tag cp27:
12-Jul-2018 14:00:57   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
12-Jul-2018 14:00:57      or: -c --help [cmd1 cmd2 ...]
12-Jul-2018 14:00:57      or: -c --help-commands
12-Jul-2018 14:00:57      or: -c cmd --help
12-Jul-2018 14:00:57  
12-Jul-2018 14:00:57   error: invalid command 'bdist_wheel'
12-Jul-2018 14:00:57  
12-Jul-2018 14:00:57   ----------------------------------------
12-Jul-2018 14:00:57   Failed building wheel for rdflib
12-Jul-2018 14:00:57   Running setup.py clean for rdflib
12-Jul-2018 14:00:57   Running setup.py bdist_wheel for SPARQLWrapper: started
12-Jul-2018 14:00:57   Running setup.py bdist_wheel for SPARQLWrapper: finished with status 'error'
12-Jul-2018 14:00:57   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-kQZZ_u/SPARQLWrapper/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpXoU0empip-wheel- --python-tag cp27:
12-Jul-2018 14:00:57   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
12-Jul-2018 14:00:57      or: -c --help [cmd1 cmd2 ...]
12-Jul-2018 14:00:57      or: -c --help-commands
12-Jul-2018 14:00:57      or: -c cmd --help
12-Jul-2018 14:00:57  
12-Jul-2018 14:00:57   error: invalid command 'bdist_wheel'
12-Jul-2018 14:00:57  
12-Jul-2018 14:00:57   ----------------------------------------
12-Jul-2018 14:00:57   Failed building wheel for SPARQLWrapper
12-Jul-2018 14:00:57   Running setup.py clean for SPARQLWrapper
12-Jul-2018 14:00:58 Failed to build Flask html5lib isodate itsdangerous Jinja2 MarkupSafe nltk rdflib SPARQLWrapper
12-Jul-2018 14:00:58 Installing collected packages: Werkzeug, MarkupSafe, Jinja2, itsdangerous, Flask, six, html5lib, isodate, nltk, pika, pyparsing, SPARQLWrapper, rdflib, requests, wheel
12-Jul-2018 14:00:58   Running setup.py install for MarkupSafe: started
12-Jul-2018 14:00:58     Running setup.py install for MarkupSafe: finished with status 'done'
12-Jul-2018 14:00:58   Running setup.py install for Jinja2: started
12-Jul-2018 14:00:58     Running setup.py install for Jinja2: finished with status 'done'
12-Jul-2018 14:00:58   Running setup.py install for itsdangerous: started
12-Jul-2018 14:00:58     Running setup.py install for itsdangerous: finished with status 'done'
12-Jul-2018 14:00:58   Running setup.py install for Flask: started
12-Jul-2018 14:00:59     Running setup.py install for Flask: finished with status 'done'
12-Jul-2018 14:00:59   Running setup.py install for html5lib: started
12-Jul-2018 14:00:59     Running setup.py install for html5lib: finished with status 'done'
12-Jul-2018 14:00:59   Running setup.py install for isodate: started
12-Jul-2018 14:00:59     Running setup.py install for isodate: finished with status 'done'
12-Jul-2018 14:00:59   Running setup.py install for nltk: started
12-Jul-2018 14:01:00     Running setup.py install for nltk: finished with status 'done'
12-Jul-2018 14:01:00   Found existing installation: pika 0.11.2
12-Jul-2018 14:01:00     Uninstalling pika-0.11.2:
12-Jul-2018 14:01:04       Successfully uninstalled pika-0.11.2
12-Jul-2018 14:01:04   Running setup.py install for SPARQLWrapper: started
12-Jul-2018 14:01:04     Running setup.py install for SPARQLWrapper: finished with status 'done'
12-Jul-2018 14:01:04   Running setup.py install for rdflib: started
12-Jul-2018 14:01:04     Running setup.py install for rdflib: finished with status 'done'
12-Jul-2018 14:01:05   Found existing installation: requests 2.18.4
12-Jul-2018 14:01:05     Uninstalling requests-2.18.4:
12-Jul-2018 14:01:07       Successfully uninstalled requests-2.18.4
12-Jul-2018 14:01:07 Successfully installed Flask-0.10.1 Jinja2-2.7.3 MarkupSafe-0.23 SPARQLWrapper-1.6.4 Werkzeug-0.10.4 html5lib-0.99999 isodate-0.5.1 itsdangerous-0.24 nltk-3.0.3 pika-0.10.0 pyparsing-2.0.3 rdflib-4.2.0 requests-2.7.0 six-1.9.0 wheel-0.24.0
12-Jul-2018 14:01:08 You are using pip version 8.1.1, however version 10.0.1 is available.
12-Jul-2018 14:01:08 You should consider upgrading via the 'pip install --upgrade pip' command.
12-Jul-2018 14:01:12 Removing intermediate container 9fc5f905e7a8
12-Jul-2018 14:01:12 ---> f79b5482c894
12-Jul-2018 14:01:12 Step 6/13 : USER clowder
12-Jul-2018 14:01:12 ---> Running in 449eb84cf002
12-Jul-2018 14:01:13 Removing intermediate container 449eb84cf002
12-Jul-2018 14:01:13 ---> 1e685cd8c9a6
12-Jul-2018 14:01:13 Step 7/13 : COPY namedentityrecognition.py /home/clowder/
12-Jul-2018 14:01:14 ---> ec815617cdca
12-Jul-2018 14:01:14 Step 8/13 : RUN /home/clowder/namedentityrecognition.py
12-Jul-2018 14:01:14 ---> Running in 236bd065127a
12-Jul-2018 14:01:15 linux spec user: unable to find user clowder: no matching entries in passwd file
12-Jul-2018 14:01:15 docker.sh: 53: exit: Illegal number: -1
12-Jul-2018 14:01:15 FAILED build of ./Dockerfile
12-Jul-2018 14:01:15 Failing task since return code of [/bin/sh docker.sh] was 2 while expected 0
12-Jul-2018 14:01:15 Finished task 'docker build' with result: Failed
12-Jul-2018 14:01:15 Running post build plugin 'Docker Container Cleanup'
12-Jul-2018 14:01:15 Running post build plugin 'NCover Results Collector'
12-Jul-2018 14:01:15 Running post build plugin 'Clover Results Collector'
12-Jul-2018 14:01:15 Running post build plugin 'npm Cache Cleanup'
12-Jul-2018 14:01:15 Running post build plugin 'Artifact Copier'
12-Jul-2018 14:01:15 Finalising the build...
12-Jul-2018 14:01:15 Stopping timer.
12-Jul-2018 14:01:15 Build CATS-EXDBP-JOB1-37 completed.
12-Jul-2018 14:01:15 Running on server: post build plugin 'NCover Results Collector'
12-Jul-2018 14:01:15 Running on server: post build plugin 'Build Hanging Detection Configuration'
12-Jul-2018 14:01:15 Running on server: post build plugin 'Clover Delta Calculator'
12-Jul-2018 14:01:15 Running on server: post build plugin 'Maven Dependencies Postprocessor'
12-Jul-2018 14:01:15 All post build plugins have finished
12-Jul-2018 14:01:15 Generating build results summary...
12-Jul-2018 14:01:15 Saving build results to disk...
12-Jul-2018 14:01:15 Logging substituted variables...
12-Jul-2018 14:01:15 Indexing build results...
12-Jul-2018 14:01:15 Finished building CATS-EXDBP-JOB1-37.