Build: #1 was successful

Job: Default Job was successful

Stages & jobs

  1. Default Stage

Build log

The build generated 436 lines of output. Download or view full build log.

29-Sep-2019 15:26:09 Build Clowder - pyclowder - seven-miles-changes - Default Job #1 (CATS-PYC20-JOB1-1) started building on agent buildserver-2.os.ncsa.edu
29-Sep-2019 15:26:09 Remote agent on host buildserver-2.os.ncsa.edu
29-Sep-2019 15:26:09 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC20-JOB1
29-Sep-2019 15:26:09 Executing build Clowder - pyclowder - seven-miles-changes - Default Job #1 (CATS-PYC20-JOB1-1)
29-Sep-2019 15:26:09 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
29-Sep-2019 15:26:09 Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC20-JOB1
29-Sep-2019 15:26:09 Updating source code to revision: d3d007d695484c8431d19f25875cfb61e3f07c38
29-Sep-2019 15:26:09 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC20-JOB1/.git'.
29-Sep-2019 15:26:09 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC20-JOB1/.git/
29-Sep-2019 15:26:09 Fetching 'refs/heads/seven-miles-changes' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder.git'. Will try to do a shallow fetch.
29-Sep-2019 15:26:09 Warning: Permanently added '[127.0.0.1]:39245' (RSA) to the list of known hosts.
29-Sep-2019 15:26:10 From ssh://127.0.0.1:39245/cats/pyclowder
29-Sep-2019 15:26:10 * [new branch]      seven-miles-changes -> seven-miles-changes
29-Sep-2019 15:26:10 Checking out revision d3d007d695484c8431d19f25875cfb61e3f07c38.
29-Sep-2019 15:26:10 Switched to branch 'seven-miles-changes'
29-Sep-2019 15:26:10 Updated source code to revision: d3d007d695484c8431d19f25875cfb61e3f07c38
29-Sep-2019 15:26:10 Finished task 'Checkout Default Repository' with result: Success
29-Sep-2019 15:26:10 Running pre-build action: VCS Version Collector
29-Sep-2019 15:26:10 Starting task 'docker build and push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
29-Sep-2019 15:26:10
Beginning to execute external process for build 'Clowder - pyclowder - seven-miles-changes - Default Job #1 (CATS-PYC20-JOB1-1)'
... running command line:
/bin/sh docker.sh
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC20-JOB1
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29-Sep-2019 15:26:10 Sending build context to Docker daemon  202.8kB
29-Sep-2019 15:26:10
29-Sep-2019 15:26:10 Step 1/6 : FROM ubuntu:16.04
29-Sep-2019 15:26:10 ---> 657d80a6401d
29-Sep-2019 15:26:10 Step 2/6 : MAINTAINER Rob Kooper <kooper@illinois.edu>
29-Sep-2019 15:26:11 ---> Running in 734fcce29e1d
29-Sep-2019 15:26:12 Removing intermediate container 734fcce29e1d
29-Sep-2019 15:26:12 ---> 4b0d68c60218
29-Sep-2019 15:26:12 Step 3/6 : RUN apt-get -q -q update && apt-get install -y --no-install-recommends         netcat         python         python-pip     && pip install --upgrade setuptools     && rm -rf /var/lib/apt/lists/*     && adduser --system clowder
29-Sep-2019 15:26:12 ---> Running in 11ea035d1af1
29-Sep-2019 15:26:25 Reading package lists...
29-Sep-2019 15:26:26 Building dependency tree...
29-Sep-2019 15:26:26 Reading state information...
29-Sep-2019 15:26:26 The following additional packages will be installed:
29-Sep-2019 15:26:26   ca-certificates libexpat1 libffi6 libpython-stdlib libpython2.7-minimal
29-Sep-2019 15:26:26   libpython2.7-stdlib libsqlite3-0 libssl1.0.0 mime-support netcat-traditional
29-Sep-2019 15:26:26   openssl python-minimal python-pip-whl python2.7 python2.7-minimal
29-Sep-2019 15:26:26 Suggested packages:
29-Sep-2019 15:26:26   python-doc python-tk python2.7-doc binutils binfmt-support
29-Sep-2019 15:26:26 Recommended packages:
29-Sep-2019 15:26:26   file build-essential python-all-dev python-setuptools python-wheel
29-Sep-2019 15:26:26 The following NEW packages will be installed:
29-Sep-2019 15:26:26   ca-certificates libexpat1 libffi6 libpython-stdlib libpython2.7-minimal
29-Sep-2019 15:26:26   libpython2.7-stdlib libsqlite3-0 libssl1.0.0 mime-support netcat
29-Sep-2019 15:26:26   netcat-traditional openssl python python-minimal python-pip python-pip-whl
29-Sep-2019 15:26:26   python2.7 python2.7-minimal
29-Sep-2019 15:26:26 0 upgraded, 18 newly installed, 0 to remove and 0 not upgraded.
29-Sep-2019 15:26:26 Need to get 7461 kB of archives.
29-Sep-2019 15:26:26 After this operation, 25.0 MB of additional disk space will be used.
29-Sep-2019 15:26:26 Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-minimal amd64 2.7.12-1ubuntu0~16.04.8 [339 kB]
29-Sep-2019 15:26:27 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7-minimal amd64 2.7.12-1ubuntu0~16.04.8 [1261 kB]
29-Sep-2019 15:26:28 Get:3 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python-minimal amd64 2.7.12-1~16.04 [28.1 kB]
29-Sep-2019 15:26:28 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 mime-support all 3.59ubuntu1 [31.0 kB]
29-Sep-2019 15:26:28 Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1 amd64 2.1.0-7ubuntu0.16.04.5 [71.5 kB]
29-Sep-2019 15:26:29 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 libffi6 amd64 3.2.1-4 [17.8 kB]
29-Sep-2019 15:26:29 Get:7 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libsqlite3-0 amd64 3.11.0-1ubuntu1.2 [397 kB]
29-Sep-2019 15:26:30 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libssl1.0.0 amd64 1.0.2g-1ubuntu4.15 [1084 kB]
29-Sep-2019 15:26:31 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-stdlib amd64 2.7.12-1ubuntu0~16.04.8 [1885 kB]
29-Sep-2019 15:26:32 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7 amd64 2.7.12-1ubuntu0~16.04.8 [224 kB]
29-Sep-2019 15:26:32 Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython-stdlib amd64 2.7.12-1~16.04 [7768 B]
29-Sep-2019 15:26:32 Get:12 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python amd64 2.7.12-1~16.04 [137 kB]
29-Sep-2019 15:26:33 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 openssl amd64 1.0.2g-1ubuntu4.15 [492 kB]
29-Sep-2019 15:26:34 Get:14 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 ca-certificates all 20170717~16.04.2 [167 kB]
29-Sep-2019 15:26:34 Get:15 http://archive.ubuntu.com/ubuntu xenial/universe amd64 netcat-traditional amd64 1.10-41 [60.7 kB]
29-Sep-2019 15:26:35 Get:16 http://archive.ubuntu.com/ubuntu xenial/universe amd64 netcat all 1.10-41 [3438 B]
29-Sep-2019 15:26:35 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-pip-whl all 8.1.1-2ubuntu0.4 [1110 kB]
29-Sep-2019 15:26:36 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-pip all 8.1.1-2ubuntu0.4 [144 kB]
29-Sep-2019 15:26:38 debconf: delaying package configuration, since apt-utils is not installed
29-Sep-2019 15:26:38 Fetched 7461 kB in 10s (721 kB/s)
29-Sep-2019 15:26:39 Selecting previously unselected package libpython2.7-minimal:amd64.
29-Sep-2019 15:26:39 (Reading database ...
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29-Sep-2019 15:26:39 (Reading database ... 4777 files and directories currently installed.)
29-Sep-2019 15:26:39 Preparing to unpack .../libpython2.7-minimal_2.7.12-1ubuntu0~16.04.8_amd64.deb ...
29-Sep-2019 15:26:39 Unpacking libpython2.7-minimal:amd64 (2.7.12-1ubuntu0~16.04.8) ...
29-Sep-2019 15:26:40 Selecting previously unselected package python2.7-minimal.
29-Sep-2019 15:26:40 Preparing to unpack .../python2.7-minimal_2.7.12-1ubuntu0~16.04.8_amd64.deb ...
29-Sep-2019 15:26:40 Unpacking python2.7-minimal (2.7.12-1ubuntu0~16.04.8) ...
29-Sep-2019 15:26:42 Selecting previously unselected package python-minimal.
29-Sep-2019 15:26:42 Preparing to unpack .../python-minimal_2.7.12-1~16.04_amd64.deb ...
29-Sep-2019 15:26:42 Unpacking python-minimal (2.7.12-1~16.04) ...
29-Sep-2019 15:26:43 Selecting previously unselected package mime-support.
29-Sep-2019 15:26:43 Preparing to unpack .../mime-support_3.59ubuntu1_all.deb ...
29-Sep-2019 15:26:43 Unpacking mime-support (3.59ubuntu1) ...
29-Sep-2019 15:26:45 Selecting previously unselected package libexpat1:amd64.
29-Sep-2019 15:26:45 Preparing to unpack .../libexpat1_2.1.0-7ubuntu0.16.04.5_amd64.deb ...
29-Sep-2019 15:26:45 Unpacking libexpat1:amd64 (2.1.0-7ubuntu0.16.04.5) ...
29-Sep-2019 15:26:46 Selecting previously unselected package libffi6:amd64.
29-Sep-2019 15:26:46 Preparing to unpack .../libffi6_3.2.1-4_amd64.deb ...
29-Sep-2019 15:26:46 Unpacking libffi6:amd64 (3.2.1-4) ...
29-Sep-2019 15:26:47 Selecting previously unselected package libsqlite3-0:amd64.
29-Sep-2019 15:26:47 Preparing to unpack .../libsqlite3-0_3.11.0-1ubuntu1.2_amd64.deb ...
29-Sep-2019 15:26:47 Unpacking libsqlite3-0:amd64 (3.11.0-1ubuntu1.2) ...
29-Sep-2019 15:26:48 Selecting previously unselected package libssl1.0.0:amd64.
29-Sep-2019 15:26:48 Preparing to unpack .../libssl1.0.0_1.0.2g-1ubuntu4.15_amd64.deb ...
29-Sep-2019 15:26:48 Unpacking libssl1.0.0:amd64 (1.0.2g-1ubuntu4.15) ...
29-Sep-2019 15:26:49 Selecting previously unselected package libpython2.7-stdlib:amd64.
29-Sep-2019 15:26:49 Preparing to unpack .../libpython2.7-stdlib_2.7.12-1ubuntu0~16.04.8_amd64.deb ...
29-Sep-2019 15:26:49 Unpacking libpython2.7-stdlib:amd64 (2.7.12-1ubuntu0~16.04.8) ...
29-Sep-2019 15:26:51 Selecting previously unselected package python2.7.
29-Sep-2019 15:26:51 Preparing to unpack .../python2.7_2.7.12-1ubuntu0~16.04.8_amd64.deb ...
29-Sep-2019 15:26:51 Unpacking python2.7 (2.7.12-1ubuntu0~16.04.8) ...
29-Sep-2019 15:26:51 Selecting previously unselected package libpython-stdlib:amd64.
29-Sep-2019 15:26:51 Preparing to unpack .../libpython-stdlib_2.7.12-1~16.04_amd64.deb ...
29-Sep-2019 15:26:51 Unpacking libpython-stdlib:amd64 (2.7.12-1~16.04) ...
29-Sep-2019 15:26:51 Processing triggers for libc-bin (2.23-0ubuntu11) ...
29-Sep-2019 15:26:53 Setting up libpython2.7-minimal:amd64 (2.7.12-1ubuntu0~16.04.8) ...
29-Sep-2019 15:26:53 Setting up python2.7-minimal (2.7.12-1ubuntu0~16.04.8) ...
29-Sep-2019 15:26:53 Linking and byte-compiling packages for runtime python2.7...
29-Sep-2019 15:26:54 Setting up python-minimal (2.7.12-1~16.04) ...
29-Sep-2019 15:26:55 Selecting previously unselected package python.
29-Sep-2019 15:26:55 (Reading database ...
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29-Sep-2019 15:26:55 (Reading database ... 5588 files and directories currently installed.)
29-Sep-2019 15:26:55 Preparing to unpack .../python_2.7.12-1~16.04_amd64.deb ...
29-Sep-2019 15:26:55 Unpacking python (2.7.12-1~16.04) ...
29-Sep-2019 15:26:56 Selecting previously unselected package openssl.
29-Sep-2019 15:26:56 Preparing to unpack .../openssl_1.0.2g-1ubuntu4.15_amd64.deb ...
29-Sep-2019 15:26:56 Unpacking openssl (1.0.2g-1ubuntu4.15) ...
29-Sep-2019 15:26:57 Selecting previously unselected package ca-certificates.
29-Sep-2019 15:26:57 Preparing to unpack .../ca-certificates_20170717~16.04.2_all.deb ...
29-Sep-2019 15:26:57 Unpacking ca-certificates (20170717~16.04.2) ...
29-Sep-2019 15:26:58 Selecting previously unselected package netcat-traditional.
29-Sep-2019 15:26:58 Preparing to unpack .../netcat-traditional_1.10-41_amd64.deb ...
29-Sep-2019 15:26:58 Unpacking netcat-traditional (1.10-41) ...
29-Sep-2019 15:26:59 Selecting previously unselected package netcat.
29-Sep-2019 15:26:59 Preparing to unpack .../netcat_1.10-41_all.deb ...
29-Sep-2019 15:26:59 Unpacking netcat (1.10-41) ...
29-Sep-2019 15:27:00 Selecting previously unselected package python-pip-whl.
29-Sep-2019 15:27:00 Preparing to unpack .../python-pip-whl_8.1.1-2ubuntu0.4_all.deb ...
29-Sep-2019 15:27:00 Unpacking python-pip-whl (8.1.1-2ubuntu0.4) ...
29-Sep-2019 15:27:01 Selecting previously unselected package python-pip.
29-Sep-2019 15:27:01 Preparing to unpack .../python-pip_8.1.1-2ubuntu0.4_all.deb ...
29-Sep-2019 15:27:01 Unpacking python-pip (8.1.1-2ubuntu0.4) ...
29-Sep-2019 15:27:01 Setting up mime-support (3.59ubuntu1) ...
29-Sep-2019 15:27:02 Setting up libexpat1:amd64 (2.1.0-7ubuntu0.16.04.5) ...
29-Sep-2019 15:27:02 Setting up libffi6:amd64 (3.2.1-4) ...
29-Sep-2019 15:27:02 Setting up libsqlite3-0:amd64 (3.11.0-1ubuntu1.2) ...
29-Sep-2019 15:27:02 Setting up libssl1.0.0:amd64 (1.0.2g-1ubuntu4.15) ...
29-Sep-2019 15:27:03 debconf: unable to initialize frontend: Dialog
29-Sep-2019 15:27:03 debconf: (TERM is not set, so the dialog frontend is not usable.)
29-Sep-2019 15:27:03 debconf: falling back to frontend: Readline
29-Sep-2019 15:27:03 debconf: unable to initialize frontend: Readline
29-Sep-2019 15:27:03 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.)
29-Sep-2019 15:27:03 debconf: falling back to frontend: Teletype
29-Sep-2019 15:27:03 Setting up libpython2.7-stdlib:amd64 (2.7.12-1ubuntu0~16.04.8) ...
29-Sep-2019 15:27:03 Setting up python2.7 (2.7.12-1ubuntu0~16.04.8) ...
29-Sep-2019 15:27:04 Setting up libpython-stdlib:amd64 (2.7.12-1~16.04) ...
29-Sep-2019 15:27:05 Setting up python (2.7.12-1~16.04) ...
29-Sep-2019 15:27:05 Setting up openssl (1.0.2g-1ubuntu4.15) ...
29-Sep-2019 15:27:05 Setting up ca-certificates (20170717~16.04.2) ...
29-Sep-2019 15:27:05 debconf: unable to initialize frontend: Dialog
29-Sep-2019 15:27:05 debconf: (TERM is not set, so the dialog frontend is not usable.)
29-Sep-2019 15:27:05 debconf: falling back to frontend: Readline
29-Sep-2019 15:27:05 debconf: unable to initialize frontend: Readline
29-Sep-2019 15:27:05 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.)
29-Sep-2019 15:27:05 debconf: falling back to frontend: Teletype
29-Sep-2019 15:27:06 Setting up netcat-traditional (1.10-41) ...
29-Sep-2019 15:27:06 update-alternatives: using /bin/nc.traditional to provide /bin/nc (nc) in auto mode
29-Sep-2019 15:27:07 Setting up netcat (1.10-41) ...
29-Sep-2019 15:27:07 Setting up python-pip-whl (8.1.1-2ubuntu0.4) ...
29-Sep-2019 15:27:07 Setting up python-pip (8.1.1-2ubuntu0.4) ...
29-Sep-2019 15:27:08 Processing triggers for libc-bin (2.23-0ubuntu11) ...
29-Sep-2019 15:27:08 Processing triggers for ca-certificates (20170717~16.04.2) ...
29-Sep-2019 15:27:09 Updating certificates in /etc/ssl/certs...
29-Sep-2019 15:27:10 148 added, 0 removed; done.
29-Sep-2019 15:27:10 Running hooks in /etc/ca-certificates/update.d...
29-Sep-2019 15:27:10 done.
29-Sep-2019 15:27:11 Collecting setuptools
29-Sep-2019 15:27:12   Downloading https://files.pythonhosted.org/packages/b2/86/095d2f7829badc207c893dd4ac767e871f6cd547145df797ea26baea4e2e/setuptools-41.2.0-py2.py3-none-any.whl (576kB)
29-Sep-2019 15:27:12 Installing collected packages: setuptools
29-Sep-2019 15:27:12 Successfully installed setuptools-41.2.0
29-Sep-2019 15:27:12 You are using pip version 8.1.1, however version 19.2.3 is available.
29-Sep-2019 15:27:12 You should consider upgrading via the 'pip install --upgrade pip' command.
29-Sep-2019 15:27:12 Adding system user `clowder' (UID 105) ...
29-Sep-2019 15:27:12 Adding new user `clowder' (UID 105) with group `nogroup' ...
29-Sep-2019 15:27:13 Creating home directory `/home/clowder' ...
29-Sep-2019 15:27:15 Removing intermediate container 11ea035d1af1
29-Sep-2019 15:27:15 ---> 27c0772cc8d0
29-Sep-2019 15:27:15 Step 4/6 : COPY pyclowder /tmp/pyclowder/pyclowder
29-Sep-2019 15:27:16 ---> 951455553fcd
29-Sep-2019 15:27:16 Step 5/6 : COPY setup.py requirements.txt /tmp/pyclowder/
29-Sep-2019 15:27:16 ---> 6acf5fafddfb
29-Sep-2019 15:27:16 Step 6/6 : RUN pip install --upgrade  -r /tmp/pyclowder/requirements.txt     && pip install --upgrade /tmp/pyclowder     && rm -rf /tmp/pyclowder
29-Sep-2019 15:27:17 ---> Running in 2715da3ad376
29-Sep-2019 15:27:18 Collecting enum34==1.1.6 (from -r /tmp/pyclowder/requirements.txt (line 1))
29-Sep-2019 15:27:19   Downloading https://files.pythonhosted.org/packages/c5/db/e56e6b4bbac7c4a06de1c50de6fe1ef3810018ae11732a50f15f62c7d050/enum34-1.1.6-py2-none-any.whl
29-Sep-2019 15:27:19 Collecting et-xmlfile==1.0.1 (from -r /tmp/pyclowder/requirements.txt (line 2))
29-Sep-2019 15:27:19   Downloading https://files.pythonhosted.org/packages/22/28/a99c42aea746e18382ad9fb36f64c1c1f04216f41797f2f0fa567da11388/et_xmlfile-1.0.1.tar.gz
29-Sep-2019 15:27:19 Collecting jdcal==1.3 (from -r /tmp/pyclowder/requirements.txt (line 3))
29-Sep-2019 15:27:19   Downloading https://files.pythonhosted.org/packages/9b/fa/40beb2aa43a13f740dd5be367a10a03270043787833409c61b79e69f1dfd/jdcal-1.3.tar.gz
29-Sep-2019 15:27:19 Collecting openpyxl==2.4.1 (from -r /tmp/pyclowder/requirements.txt (line 4))
29-Sep-2019 15:27:19   Downloading https://files.pythonhosted.org/packages/dc/f2/c57f9f00f8ae5e1a73cb096dbf600433724f037ffcbd51c456f89da5efd9/openpyxl-2.4.1.tar.gz (154kB)
29-Sep-2019 15:27:19 Collecting pika==0.10.0 (from -r /tmp/pyclowder/requirements.txt (line 5))
29-Sep-2019 15:27:19   Downloading https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl (92kB)
29-Sep-2019 15:27:19 Collecting python-dateutil==2.6.0 (from -r /tmp/pyclowder/requirements.txt (line 6))
29-Sep-2019 15:27:19   Downloading https://files.pythonhosted.org/packages/40/8b/275015d7a9ec293cf1bbf55433258fbc9d0711890a7f6dc538bac7b86bce/python_dateutil-2.6.0-py2.py3-none-any.whl (194kB)
29-Sep-2019 15:27:19 Collecting pytz==2016.10 (from -r /tmp/pyclowder/requirements.txt (line 7))
29-Sep-2019 15:27:20   Downloading https://files.pythonhosted.org/packages/f5/fa/4a9aefc206aa49a4b5e0a72f013df1f471b4714cdbe6d78f0134feeeecdb/pytz-2016.10-py2.py3-none-any.whl (483kB)
29-Sep-2019 15:27:20 Collecting PyYAML==3.11 (from -r /tmp/pyclowder/requirements.txt (line 8))
29-Sep-2019 15:27:20   Downloading https://files.pythonhosted.org/packages/75/5e/b84feba55e20f8da46ead76f14a3943c8cb722d40360702b2365b91dec00/PyYAML-3.11.tar.gz (248kB)
29-Sep-2019 15:27:20 Collecting requests==2.10.0 (from -r /tmp/pyclowder/requirements.txt (line 9))
29-Sep-2019 15:27:20   Downloading https://files.pythonhosted.org/packages/99/b4/63d99ba8e189c47d906b43bae18af4396e336f2b1bfec86af31efe2d2cb8/requests-2.10.0-py2.py3-none-any.whl (506kB)
29-Sep-2019 15:27:20 Collecting six==1.10.0 (from -r /tmp/pyclowder/requirements.txt (line 10))
29-Sep-2019 15:27:20   Downloading https://files.pythonhosted.org/packages/c8/0a/b6723e1bc4c516cb687841499455a8505b44607ab535be01091c0f24f079/six-1.10.0-py2.py3-none-any.whl
29-Sep-2019 15:27:20 Collecting wheel==0.24.0 (from -r /tmp/pyclowder/requirements.txt (line 11))
29-Sep-2019 15:27:21   Downloading https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl (63kB)
29-Sep-2019 15:27:21 Collecting pytest==3.0.3 (from -r /tmp/pyclowder/requirements.txt (line 12))
29-Sep-2019 15:27:21   Downloading https://files.pythonhosted.org/packages/a4/e9/bf75a9a91c4a545bad262937d1defa90d95ac912118a706406e21aef889a/pytest-3.0.3-py2.py3-none-any.whl (169kB)
29-Sep-2019 15:27:21 Collecting pytest-pep8==1.0.6 (from -r /tmp/pyclowder/requirements.txt (line 13))
29-Sep-2019 15:27:21   Downloading https://files.pythonhosted.org/packages/1f/1c/c834344ef39381558b047bea1e3005197fa8457c199d58219996ca07defb/pytest-pep8-1.0.6.tar.gz
29-Sep-2019 15:27:21 Collecting pytest-capturelog==0.7 (from -r /tmp/pyclowder/requirements.txt (line 14))
29-Sep-2019 15:27:21   Downloading https://files.pythonhosted.org/packages/35/e9/6051b5bb65ad5049d5eb60127d34c63ba724e17acf8b1f2f2e0755131b6c/pytest-capturelog-0.7.tar.gz
29-Sep-2019 15:27:21 Collecting urllib3==1.14 (from -r /tmp/pyclowder/requirements.txt (line 15))
29-Sep-2019 15:27:21   Downloading https://files.pythonhosted.org/packages/73/55/63deba73d82dfa39974ca3903110c3e3557ff8758a3a79482810915b385d/urllib3-1.14-py2.py3-none-any.whl (89kB)
29-Sep-2019 15:27:21 Collecting py>=1.4.29 (from pytest==3.0.3->-r /tmp/pyclowder/requirements.txt (line 12))
29-Sep-2019 15:27:21   Downloading https://files.pythonhosted.org/packages/76/bc/394ad449851729244a97857ee14d7cba61ddb268dce3db538ba2f2ba1f0f/py-1.8.0-py2.py3-none-any.whl (83kB)
29-Sep-2019 15:27:21 Collecting pytest-cache (from pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 13))
29-Sep-2019 15:27:21   Downloading https://files.pythonhosted.org/packages/d1/15/082fd0428aab33d2bafa014f3beb241830427ba803a8912a5aaeaf3a5663/pytest-cache-1.0.tar.gz
29-Sep-2019 15:27:22 Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 13))
29-Sep-2019 15:27:22   Downloading https://files.pythonhosted.org/packages/42/3f/669429ce58de2c22d8d2c542752e137ec4b9885fff398d3eceb1a7f5acb4/pep8-1.7.1-py2.py3-none-any.whl (41kB)
29-Sep-2019 15:27:22 Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 13))
29-Sep-2019 15:27:22   Downloading https://files.pythonhosted.org/packages/d3/2e/c63af07fa471e0a02d05793c7a56a9f7d274a8489442a5dc4fb3b2b3c705/execnet-1.7.1-py2.py3-none-any.whl
29-Sep-2019 15:27:22 Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 13))
29-Sep-2019 15:27:22   Downloading https://files.pythonhosted.org/packages/67/08/4815a09603fc800209431bec5b8bd2acf2f95abdfb558a44a42507fb94da/apipkg-1.5-py2.py3-none-any.whl
29-Sep-2019 15:27:22 Building wheels for collected packages: et-xmlfile, jdcal, openpyxl, PyYAML, pytest-pep8, pytest-capturelog, pytest-cache
29-Sep-2019 15:27:22   Running setup.py bdist_wheel for et-xmlfile: started
29-Sep-2019 15:27:22   Running setup.py bdist_wheel for et-xmlfile: finished with status 'error'
29-Sep-2019 15:27:22   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-7E8yuy/et-xmlfile/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpa1ZlFipip-wheel- --python-tag cp27:
29-Sep-2019 15:27:22   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
29-Sep-2019 15:27:22      or: -c --help [cmd1 cmd2 ...]
29-Sep-2019 15:27:22      or: -c --help-commands
29-Sep-2019 15:27:22      or: -c cmd --help
29-Sep-2019 15:27:22  
29-Sep-2019 15:27:22   error: invalid command 'bdist_wheel'
29-Sep-2019 15:27:22  
29-Sep-2019 15:27:22   ----------------------------------------
29-Sep-2019 15:27:22   Failed building wheel for et-xmlfile
29-Sep-2019 15:27:22   Running setup.py clean for et-xmlfile
29-Sep-2019 15:27:22   Running setup.py bdist_wheel for jdcal: started
29-Sep-2019 15:27:22   Running setup.py bdist_wheel for jdcal: finished with status 'error'
29-Sep-2019 15:27:22   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-7E8yuy/jdcal/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpqUhnIspip-wheel- --python-tag cp27:
29-Sep-2019 15:27:22   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
29-Sep-2019 15:27:22      or: -c --help [cmd1 cmd2 ...]
29-Sep-2019 15:27:22      or: -c --help-commands
29-Sep-2019 15:27:22      or: -c cmd --help
29-Sep-2019 15:27:22  
29-Sep-2019 15:27:22   error: invalid command 'bdist_wheel'
29-Sep-2019 15:27:22  
29-Sep-2019 15:27:22   ----------------------------------------
29-Sep-2019 15:27:22   Running setup.py clean for jdcal
29-Sep-2019 15:27:22   Failed building wheel for jdcal
29-Sep-2019 15:27:22   Running setup.py bdist_wheel for openpyxl: started
29-Sep-2019 15:27:23   Running setup.py bdist_wheel for openpyxl: finished with status 'error'
29-Sep-2019 15:27:23   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-7E8yuy/openpyxl/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpkZES0Qpip-wheel- --python-tag cp27:
29-Sep-2019 15:27:23   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
29-Sep-2019 15:27:23      or: -c --help [cmd1 cmd2 ...]
29-Sep-2019 15:27:23      or: -c --help-commands
29-Sep-2019 15:27:23      or: -c cmd --help
29-Sep-2019 15:27:23  
29-Sep-2019 15:27:23   error: invalid command 'bdist_wheel'
29-Sep-2019 15:27:23  
29-Sep-2019 15:27:23   ----------------------------------------
29-Sep-2019 15:27:23   Failed building wheel for openpyxl
29-Sep-2019 15:27:23   Running setup.py clean for openpyxl
29-Sep-2019 15:27:23   Running setup.py bdist_wheel for PyYAML: started
29-Sep-2019 15:27:23   Running setup.py bdist_wheel for PyYAML: finished with status 'error'
29-Sep-2019 15:27:23   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-7E8yuy/PyYAML/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpYPS5Axpip-wheel- --python-tag cp27:
29-Sep-2019 15:27:23   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
29-Sep-2019 15:27:23      or: -c --help [cmd1 cmd2 ...]
29-Sep-2019 15:27:23      or: -c --help-commands
29-Sep-2019 15:27:23      or: -c cmd --help
29-Sep-2019 15:27:23  
29-Sep-2019 15:27:23   error: invalid command 'bdist_wheel'
29-Sep-2019 15:27:23  
29-Sep-2019 15:27:23   ----------------------------------------
29-Sep-2019 15:27:23   Failed building wheel for PyYAML
29-Sep-2019 15:27:23   Running setup.py clean for PyYAML
29-Sep-2019 15:27:23   Running setup.py bdist_wheel for pytest-pep8: started
29-Sep-2019 15:27:23   Running setup.py bdist_wheel for pytest-pep8: finished with status 'error'
29-Sep-2019 15:27:23   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-7E8yuy/pytest-pep8/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmp7HndGHpip-wheel- --python-tag cp27:
29-Sep-2019 15:27:23   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
29-Sep-2019 15:27:23      or: -c --help [cmd1 cmd2 ...]
29-Sep-2019 15:27:23      or: -c --help-commands
29-Sep-2019 15:27:23      or: -c cmd --help
29-Sep-2019 15:27:23  
29-Sep-2019 15:27:23   error: invalid command 'bdist_wheel'
29-Sep-2019 15:27:23  
29-Sep-2019 15:27:23   ----------------------------------------
29-Sep-2019 15:27:23   Failed building wheel for pytest-pep8
29-Sep-2019 15:27:23   Running setup.py clean for pytest-pep8
29-Sep-2019 15:27:23   Running setup.py bdist_wheel for pytest-capturelog: started
29-Sep-2019 15:27:23   Running setup.py bdist_wheel for pytest-capturelog: finished with status 'error'
29-Sep-2019 15:27:23   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-7E8yuy/pytest-capturelog/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpYme58epip-wheel- --python-tag cp27:
29-Sep-2019 15:27:23   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
29-Sep-2019 15:27:23      or: -c --help [cmd1 cmd2 ...]
29-Sep-2019 15:27:23      or: -c --help-commands
29-Sep-2019 15:27:23      or: -c cmd --help
29-Sep-2019 15:27:23  
29-Sep-2019 15:27:23   error: invalid command 'bdist_wheel'
29-Sep-2019 15:27:23  
29-Sep-2019 15:27:23   ----------------------------------------
29-Sep-2019 15:27:23   Failed building wheel for pytest-capturelog
29-Sep-2019 15:27:23   Running setup.py clean for pytest-capturelog
29-Sep-2019 15:27:24   Running setup.py bdist_wheel for pytest-cache: started
29-Sep-2019 15:27:24   Running setup.py bdist_wheel for pytest-cache: finished with status 'error'
29-Sep-2019 15:27:24   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-7E8yuy/pytest-cache/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpLjc4xIpip-wheel- --python-tag cp27:
29-Sep-2019 15:27:24   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
29-Sep-2019 15:27:24      or: -c --help [cmd1 cmd2 ...]
29-Sep-2019 15:27:24      or: -c --help-commands
29-Sep-2019 15:27:24      or: -c cmd --help
29-Sep-2019 15:27:24  
29-Sep-2019 15:27:24   error: invalid command 'bdist_wheel'
29-Sep-2019 15:27:24  
29-Sep-2019 15:27:24   ----------------------------------------
29-Sep-2019 15:27:24   Failed building wheel for pytest-cache
29-Sep-2019 15:27:24   Running setup.py clean for pytest-cache
29-Sep-2019 15:27:24 Failed to build et-xmlfile jdcal openpyxl PyYAML pytest-pep8 pytest-capturelog pytest-cache
29-Sep-2019 15:27:24 Installing collected packages: enum34, et-xmlfile, jdcal, openpyxl, pika, six, python-dateutil, pytz, PyYAML, requests, wheel, py, pytest, apipkg, execnet, pytest-cache, pep8, pytest-pep8, pytest-capturelog, urllib3
29-Sep-2019 15:27:24   Running setup.py install for et-xmlfile: started
29-Sep-2019 15:27:24     Running setup.py install for et-xmlfile: finished with status 'done'
29-Sep-2019 15:27:24   Running setup.py install for jdcal: started
29-Sep-2019 15:27:24     Running setup.py install for jdcal: finished with status 'done'
29-Sep-2019 15:27:24   Running setup.py install for openpyxl: started
29-Sep-2019 15:27:25     Running setup.py install for openpyxl: finished with status 'done'
29-Sep-2019 15:27:25   Running setup.py install for PyYAML: started
29-Sep-2019 15:27:25     Running setup.py install for PyYAML: finished with status 'done'
29-Sep-2019 15:27:26   Running setup.py install for pytest-cache: started
29-Sep-2019 15:27:26     Running setup.py install for pytest-cache: finished with status 'done'
29-Sep-2019 15:27:26   Running setup.py install for pytest-pep8: started
29-Sep-2019 15:27:26     Running setup.py install for pytest-pep8: finished with status 'done'
29-Sep-2019 15:27:26   Running setup.py install for pytest-capturelog: started
29-Sep-2019 15:27:26     Running setup.py install for pytest-capturelog: finished with status 'done'
29-Sep-2019 15:27:27 Successfully installed PyYAML-3.11 apipkg-1.5 enum34-1.1.6 et-xmlfile-1.0.1 execnet-1.7.1 jdcal-1.3 openpyxl-2.4.1 pep8-1.7.1 pika-0.10.0 py-1.8.0 pytest-3.0.3 pytest-cache-1.0 pytest-capturelog-0.7 pytest-pep8-1.0.6 python-dateutil-2.6.0 pytz-2016.10 requests-2.10.0 six-1.10.0 urllib3-1.14 wheel-0.24.0
29-Sep-2019 15:27:27 You are using pip version 8.1.1, however version 19.2.3 is available.
29-Sep-2019 15:27:27 You should consider upgrading via the 'pip install --upgrade pip' command.
29-Sep-2019 15:27:27 Processing /tmp/pyclowder
29-Sep-2019 15:27:28 Installing collected packages: pyclowder
29-Sep-2019 15:27:28   Running setup.py install for pyclowder: started
29-Sep-2019 15:27:28     Running setup.py install for pyclowder: finished with status 'done'
29-Sep-2019 15:27:28 Successfully installed pyclowder-2.0.0
29-Sep-2019 15:27:28 You are using pip version 8.1.1, however version 19.2.3 is available.
29-Sep-2019 15:27:28 You should consider upgrading via the 'pip install --upgrade pip' command.
29-Sep-2019 15:27:30 Removing intermediate container 2715da3ad376
29-Sep-2019 15:27:30 ---> 4960af30c3f4
29-Sep-2019 15:27:30 Successfully built 4960af30c3f4
29-Sep-2019 15:27:30 Successfully tagged 3956:latest
29-Sep-2019 15:27:31 Untagged: 3956:latest
29-Sep-2019 15:27:31 Sending build context to Docker daemon  11.78kB
29-Sep-2019 15:27:31
29-Sep-2019 15:27:31 Step 1/7 : FROM clowder/pyclowder:2
29-Sep-2019 15:27:31 ---> 4960af30c3f4
29-Sep-2019 15:27:31 Step 2/7 : MAINTAINER Rob Kooper <kooper@illinois.edu>
29-Sep-2019 15:27:31 ---> Running in ccd1a6ee582e
29-Sep-2019 15:27:31 Removing intermediate container ccd1a6ee582e
29-Sep-2019 15:27:31 ---> 0bcf24bf3259
29-Sep-2019 15:27:31 Step 3/7 : ENV RABBITMQ_URI=""     RABBITMQ_EXCHANGE="clowder"     RABBITMQ_QUEUE="ncsa.wordcount"     REGISTRATION_ENDPOINTS="https://clowder.ncsa.illinois.edu/extractors"     MAIN_SCRIPT="wordcount.py"
29-Sep-2019 15:27:32 ---> Running in 5adcf23e1f20
29-Sep-2019 15:27:32 Removing intermediate container 5adcf23e1f20
29-Sep-2019 15:27:32 ---> acc9122706be
29-Sep-2019 15:27:32 Step 4/7 : USER clowder
29-Sep-2019 15:27:32 ---> Running in 7dac6807658c
29-Sep-2019 15:27:33 Removing intermediate container 7dac6807658c
29-Sep-2019 15:27:33 ---> de98c5d3d396
29-Sep-2019 15:27:33 Step 5/7 : COPY entrypoint.sh *.py extractor_info.json /home/clowder/
29-Sep-2019 15:27:34 ---> c56088d74292
29-Sep-2019 15:27:34 Step 6/7 : ENTRYPOINT ["/home/clowder/entrypoint.sh"]
29-Sep-2019 15:27:35 ---> Running in eafff1f3448e
29-Sep-2019 15:27:35 Removing intermediate container eafff1f3448e
29-Sep-2019 15:27:35 ---> 05934421e22e
29-Sep-2019 15:27:35 Step 7/7 : CMD ["extractor"]
29-Sep-2019 15:27:35 ---> Running in 4bd76fae44ef
29-Sep-2019 15:27:36 Removing intermediate container 4bd76fae44ef
29-Sep-2019 15:27:36 ---> 4f68423c4d01
29-Sep-2019 15:27:36 Successfully built 4f68423c4d01
29-Sep-2019 15:27:36 Successfully tagged 3956:latest
29-Sep-2019 15:27:36 Untagged: 3956:latest
29-Sep-2019 15:27:36 Untagged: clowder/pyclowder:latest
29-Sep-2019 15:27:36 Untagged: clowder/extractors-wordcount:latest
29-Sep-2019 15:27:36 Finished task 'docker build and push' with result: Success
29-Sep-2019 15:27:36 Running post build plugin 'Docker Container Cleanup'
29-Sep-2019 15:27:36 Running post build plugin 'NCover Results Collector'
29-Sep-2019 15:27:36 Running post build plugin 'Clover Results Collector'
29-Sep-2019 15:27:36 Running post build plugin 'npm Cache Cleanup'
29-Sep-2019 15:27:36 Running post build plugin 'Artifact Copier'
29-Sep-2019 15:27:36 Finalising the build...
29-Sep-2019 15:27:36 Stopping timer.
29-Sep-2019 15:27:36 Build CATS-PYC20-JOB1-1 completed.
29-Sep-2019 15:27:36 Running on server: post build plugin 'NCover Results Collector'
29-Sep-2019 15:27:36 Running on server: post build plugin 'Build Hanging Detection Configuration'
29-Sep-2019 15:27:36 Running on server: post build plugin 'Clover Delta Calculator'
29-Sep-2019 15:27:36 Running on server: post build plugin 'Maven Dependencies Postprocessor'
29-Sep-2019 15:27:36 All post build plugins have finished
29-Sep-2019 15:27:36 Generating build results summary...
29-Sep-2019 15:27:36 Saving build results to disk...
29-Sep-2019 15:27:36 Logging substituted variables...
29-Sep-2019 15:27:36 Indexing build results...
29-Sep-2019 15:27:36 Finished building CATS-PYC20-JOB1-1.