Next Generation of pyClowder
Build: #2 was successful
Job: Default Job was successful
Build log
The build generated 443 lines of output. Download or view full build log.
05-Aug-2017 04:26:14 | Build Clowder - pyclowder2 - add-get-or-create-methods - Default Job #2 (CATS-PYC246-JOB1-2) started building on agent buildserver-3.os.ncsa.edu |
05-Aug-2017 04:26:14 | Remote agent on host buildserver-3.os.ncsa.edu |
05-Aug-2017 04:26:14 | Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC246-JOB1 |
05-Aug-2017 04:26:14 | Executing build Clowder - pyclowder2 - add-get-or-create-methods - Default Job #2 (CATS-PYC246-JOB1-2) |
05-Aug-2017 04:26:14 | Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' |
05-Aug-2017 04:26:14 | Updating source code to revision: de5531efab858e95a390595f2e968222a786b16b |
05-Aug-2017 04:26:24 | Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC246-JOB1/.git'. |
05-Aug-2017 04:26:24 | Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC246-JOB1/.git/ |
05-Aug-2017 04:26:25 | Fetching 'refs/heads/add-get-or-create-methods' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git'. Will try to do a shallow fetch. |
05-Aug-2017 04:26:25 | Warning: Permanently added '[127.0.0.1]:34708' (RSA) to the list of known hosts. |
05-Aug-2017 04:26:26 | From ssh://127.0.0.1:34708/cats/pyclowder2 |
05-Aug-2017 04:26:26 | * [new branch] add-get-or-create-methods -> add-get-or-create-methods |
05-Aug-2017 04:26:26 | Checking out revision de5531efab858e95a390595f2e968222a786b16b. |
05-Aug-2017 04:26:26 | Switched to branch 'add-get-or-create-methods' |
05-Aug-2017 04:26:26 | Updated source code to revision: de5531efab858e95a390595f2e968222a786b16b |
05-Aug-2017 04:26:26 | Finished task 'Checkout Default Repository' with result: Success |
05-Aug-2017 04:26:26 | Running pre-build action: VCS Version Collector |
05-Aug-2017 04:26:26 | Starting task 'pytest' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' |
05-Aug-2017 04:26:26 | Beginning to execute external process for build 'Clowder - pyclowder2 - add-get-or-create-methods - Default Job #2 (CATS-PYC246-JOB1-2)' ... running command line: /home/bamboo/bamboo-agent-home/temp/CATS-PYC246-JOB1-2-ScriptBuildTask-6294092941993639232.sh ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC246-JOB1 ... using extra environment variables: bamboo_planRepository_1_branch=add-get-or-create-methods bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster bamboo_planRepository_1_branchDisplayName=add-get-or-create-methods bamboo_repository_revision_number=de5531efab858e95a390595f2e968222a786b16b bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC246-JOB1-2 bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build bamboo_planRepository_1_name=pyclowder2 bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC246-JOB1 bamboo_buildKey=CATS-PYC246-JOB1 bamboo_capability_system_os=linux bamboo_shortPlanName=add-get-or-create-methods bamboo_planRepository_name=pyclowder2 bamboo_buildNumber=2 bamboo_shortJobName=Default Job bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC246-JOB1-2 bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_repository_148209740_git_username= bamboo_agentId=143032321 bamboo_planName=Clowder - 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05-Aug-2017 04:26:26 | New python executable in /tmp/virtualenv/pyclowder2/bin/python2 |
05-Aug-2017 04:26:26 | Also creating executable in /tmp/virtualenv/pyclowder2/bin/python |
05-Aug-2017 04:26:29 | Installing setuptools, pkg_resources, pip, wheel...done. |
05-Aug-2017 04:26:29 | Running virtualenv with interpreter /usr/bin/python2 |
05-Aug-2017 04:26:29 | Collecting enum34==1.1.6 (from -r requirements.txt (line 1)) |
05-Aug-2017 04:26:29 | Using cached enum34-1.1.6-py2-none-any.whl |
05-Aug-2017 04:26:29 | Collecting pika==0.10.0 (from -r requirements.txt (line 2)) |
05-Aug-2017 04:26:29 | Using cached pika-0.10.0-py2.py3-none-any.whl |
05-Aug-2017 04:26:30 | Collecting PyYAML==3.11 (from -r requirements.txt (line 3)) |
05-Aug-2017 04:26:30 | Collecting requests==2.10.0 (from -r requirements.txt (line 4)) |
05-Aug-2017 04:26:30 | Using cached requests-2.10.0-py2.py3-none-any.whl |
05-Aug-2017 04:26:30 | Collecting wheel==0.24.0 (from -r requirements.txt (line 5)) |
05-Aug-2017 04:26:30 | Using cached wheel-0.24.0-py2.py3-none-any.whl |
05-Aug-2017 04:26:30 | Collecting pytest==3.0.3 (from -r requirements.txt (line 6)) |
05-Aug-2017 04:26:30 | Using cached pytest-3.0.3-py2.py3-none-any.whl |
05-Aug-2017 04:26:30 | Collecting pytest-pep8==1.0.6 (from -r requirements.txt (line 7)) |
05-Aug-2017 04:26:30 | Collecting urllib3==1.14 (from -r requirements.txt (line 8)) |
05-Aug-2017 04:26:30 | Using cached urllib3-1.14-py2.py3-none-any.whl |
05-Aug-2017 04:26:30 | Collecting py>=1.4.29 (from pytest==3.0.3->-r requirements.txt (line 6)) |
05-Aug-2017 04:26:30 | Using cached py-1.4.34-py2.py3-none-any.whl |
05-Aug-2017 04:26:30 | Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
05-Aug-2017 04:26:30 | Using cached pep8-1.7.0-py2.py3-none-any.whl |
05-Aug-2017 04:26:30 | Collecting pytest-cache (from pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
05-Aug-2017 04:26:30 | Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
05-Aug-2017 04:26:30 | Using cached execnet-1.4.1-py2.py3-none-any.whl |
05-Aug-2017 04:26:31 | Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
05-Aug-2017 04:26:31 | Using cached apipkg-1.4-py2.py3-none-any.whl |
05-Aug-2017 04:26:31 | Installing collected packages: enum34, pika, PyYAML, requests, wheel, py, pytest, pep8, apipkg, execnet, pytest-cache, pytest-pep8, urllib3 |
05-Aug-2017 04:26:31 | Found existing installation: wheel 0.30.0a0 |
05-Aug-2017 04:26:31 | Uninstalling wheel-0.30.0a0: |
05-Aug-2017 04:26:31 | Successfully uninstalled wheel-0.30.0a0 |
05-Aug-2017 04:26:31 | Successfully installed PyYAML-3.11 apipkg-1.4 enum34-1.1.6 execnet-1.4.1 pep8-1.7.0 pika-0.10.0 py-1.4.34 pytest-3.0.3 pytest-cache-1.0 pytest-pep8-1.0.6 requests-2.10.0 urllib3-1.14 wheel-0.24.0 |
05-Aug-2017 04:26:32 | ============================= test session starts ============================== |
05-Aug-2017 04:26:32 | platform linux2 -- Python 2.7.12, pytest-3.0.3, py-1.4.34, pluggy-0.4.0 |
05-Aug-2017 04:26:32 | rootdir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC246-JOB1, inifile: setup.cfg |
05-Aug-2017 04:26:32 | plugins: pep8-1.0.6 |
05-Aug-2017 04:26:32 | collected 12 items |
05-Aug-2017 04:26:32 | |
05-Aug-2017 04:26:32 | setup.py . |
05-Aug-2017 04:26:32 | pyclowder/__init__.py . |
05-Aug-2017 04:26:32 | pyclowder/collections.py . |
05-Aug-2017 04:26:32 | pyclowder/connectors.py . |
05-Aug-2017 04:26:32 | pyclowder/datasets.py . |
05-Aug-2017 04:26:32 | pyclowder/extractors.py . |
05-Aug-2017 04:26:32 | pyclowder/files.py . |
05-Aug-2017 04:26:32 | pyclowder/geostreams.py . |
05-Aug-2017 04:26:32 | pyclowder/sections.py . |
05-Aug-2017 04:26:32 | pyclowder/utils.py . |
05-Aug-2017 04:26:32 | sample-extractors/echo/echo.py . |
05-Aug-2017 04:26:32 | sample-extractors/wordcount/wordcount.py . |
05-Aug-2017 04:26:32 | |
05-Aug-2017 04:26:32 | generated xml file: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC246-JOB1/test-reports/results.xml |
05-Aug-2017 04:26:32 | ========================== 12 passed in 0.25 seconds =========================== |
05-Aug-2017 04:26:32 | Finished task 'pytest' with result: Success |
05-Aug-2017 04:26:32 | Starting task 'docker build and push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' |
05-Aug-2017 04:26:32 | Beginning to execute external process for build 'Clowder - pyclowder2 - add-get-or-create-methods - Default Job #2 (CATS-PYC246-JOB1-2)' ... running command line: /bin/sh docker.sh ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC246-JOB1 ... using extra environment variables: bamboo_planRepository_1_branch=add-get-or-create-methods bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster bamboo_planRepository_1_branchDisplayName=add-get-or-create-methods bamboo_repository_revision_number=de5531efab858e95a390595f2e968222a786b16b bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC246-JOB1-2 bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build bamboo_planRepository_1_name=pyclowder2 bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC246-JOB1 bamboo_buildKey=CATS-PYC246-JOB1 bamboo_capability_system_os=linux bamboo_shortPlanName=add-get-or-create-methods bamboo_planRepository_name=pyclowder2 bamboo_buildNumber=2 bamboo_shortJobName=Default Job bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC246-JOB1-2 bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_repository_148209740_git_username= bamboo_agentId=143032321 bamboo_planName=Clowder - 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05-Aug-2017 04:26:32 | Sending build context to Docker daemon 131.6 kB |
05-Aug-2017 04:26:32 | |
05-Aug-2017 04:26:32 | Step 1/6 : FROM ubuntu:16.04 |
05-Aug-2017 04:26:33 | 16.04: Pulling from library/ubuntu |
05-Aug-2017 04:26:33 | e0a742c2abfd: Pulling fs layer |
05-Aug-2017 04:26:33 | 486cb8339a27: Pulling fs layer |
05-Aug-2017 04:26:33 | dc6f0d824617: Pulling fs layer |
05-Aug-2017 04:26:33 | 4f7a5649a30e: Pulling fs layer |
05-Aug-2017 04:26:33 | 672363445ad2: Pulling fs layer |
05-Aug-2017 04:26:33 | 4f7a5649a30e: Waiting |
05-Aug-2017 04:26:33 | 672363445ad2: Waiting |
05-Aug-2017 04:26:33 | dc6f0d824617: Download complete |
05-Aug-2017 04:26:33 | 486cb8339a27: Download complete |
05-Aug-2017 04:26:33 | 4f7a5649a30e: Verifying Checksum |
05-Aug-2017 04:26:33 | 672363445ad2: Verifying Checksum |
05-Aug-2017 04:26:33 | 672363445ad2: Download complete |
05-Aug-2017 04:26:34 | e0a742c2abfd: Verifying Checksum |
05-Aug-2017 04:26:34 | e0a742c2abfd: Download complete |
05-Aug-2017 04:26:37 | e0a742c2abfd: Pull complete |
05-Aug-2017 04:26:39 | 486cb8339a27: Pull complete |
05-Aug-2017 04:26:40 | dc6f0d824617: Pull complete |
05-Aug-2017 04:26:41 | 4f7a5649a30e: Pull complete |
05-Aug-2017 04:26:41 | 672363445ad2: Pull complete |
05-Aug-2017 04:26:41 | Digest: sha256:84c334414e2bfdcae99509a6add166bbb4fa4041dc3fa6af08046a66fed3005f |
05-Aug-2017 04:26:41 | Status: Downloaded newer image for ubuntu:16.04 |
05-Aug-2017 04:26:41 | ---> 14f60031763d |
05-Aug-2017 04:26:41 | Step 2/6 : MAINTAINER Rob Kooper <kooper@illinois.edu> |
05-Aug-2017 04:26:41 | ---> Running in 217e0cec141f |
05-Aug-2017 04:26:42 | ---> f7c30d3182ac |
05-Aug-2017 04:26:42 | Removing intermediate container 217e0cec141f |
05-Aug-2017 04:26:42 | Step 3/6 : RUN apt-get -q -q update && apt-get install -y --no-install-recommends netcat python python-pip && pip install --upgrade setuptools && rm -rf /var/lib/apt/lists/* && adduser --system clowder |
05-Aug-2017 04:26:42 | ---> Running in 0d426feeaa11 |
05-Aug-2017 04:26:47 | Reading package lists... |
05-Aug-2017 04:26:47 | Building dependency tree... |
05-Aug-2017 04:26:47 | Reading state information... |
05-Aug-2017 04:26:47 | The following additional packages will be installed: |
05-Aug-2017 04:26:47 | ca-certificates libexpat1 libffi6 libpython-stdlib libpython2.7-minimal |
05-Aug-2017 04:26:47 | libpython2.7-stdlib libsqlite3-0 libssl1.0.0 mime-support netcat-traditional |
05-Aug-2017 04:26:47 | openssl python-minimal python-pip-whl python2.7 python2.7-minimal |
05-Aug-2017 04:26:47 | Suggested packages: |
05-Aug-2017 04:26:47 | python-doc python-tk python2.7-doc binutils binfmt-support |
05-Aug-2017 04:26:47 | Recommended packages: |
05-Aug-2017 04:26:47 | file build-essential python-all-dev python-setuptools python-wheel |
05-Aug-2017 04:26:47 | The following NEW packages will be installed: |
05-Aug-2017 04:26:47 | ca-certificates libexpat1 libffi6 libpython-stdlib libpython2.7-minimal |
05-Aug-2017 04:26:47 | libpython2.7-stdlib libsqlite3-0 libssl1.0.0 mime-support netcat |
05-Aug-2017 04:26:47 | netcat-traditional openssl python python-minimal python-pip python-pip-whl |
05-Aug-2017 04:26:47 | python2.7 python2.7-minimal |
05-Aug-2017 04:26:47 | 0 upgraded, 18 newly installed, 0 to remove and 8 not upgraded. |
05-Aug-2017 04:26:47 | Need to get 7514 kB of archives. |
05-Aug-2017 04:26:47 | After this operation, 25.1 MB of additional disk space will be used. |
05-Aug-2017 04:26:47 | Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-minimal amd64 2.7.12-1ubuntu0~16.04.1 [339 kB] |
05-Aug-2017 04:26:48 | Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7-minimal amd64 2.7.12-1ubuntu0~16.04.1 [1295 kB] |
05-Aug-2017 04:26:48 | Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-minimal amd64 2.7.11-1 [28.2 kB] |
05-Aug-2017 04:26:48 | Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 mime-support all 3.59ubuntu1 [31.0 kB] |
05-Aug-2017 04:26:48 | Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1 amd64 2.1.0-7ubuntu0.16.04.3 [71.2 kB] |
05-Aug-2017 04:26:48 | Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 libffi6 amd64 3.2.1-4 [17.8 kB] |
05-Aug-2017 04:26:48 | Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsqlite3-0 amd64 3.11.0-1ubuntu1 [396 kB] |
05-Aug-2017 04:26:49 | Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libssl1.0.0 amd64 1.0.2g-1ubuntu4.8 [1081 kB] |
05-Aug-2017 04:26:49 | Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-stdlib amd64 2.7.12-1ubuntu0~16.04.1 [1884 kB] |
05-Aug-2017 04:26:50 | Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7 amd64 2.7.12-1ubuntu0~16.04.1 [224 kB] |
05-Aug-2017 04:26:50 | Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpython-stdlib amd64 2.7.11-1 [7656 B] |
05-Aug-2017 04:26:50 | Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 python amd64 2.7.11-1 [137 kB] |
05-Aug-2017 04:26:50 | Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 openssl amd64 1.0.2g-1ubuntu4.8 [492 kB] |
05-Aug-2017 04:26:50 | Get:14 http://archive.ubuntu.com/ubuntu xenial/main amd64 ca-certificates all 20160104ubuntu1 [191 kB] |
05-Aug-2017 04:26:50 | Get:15 http://archive.ubuntu.com/ubuntu xenial/universe amd64 netcat-traditional amd64 1.10-41 [60.7 kB] |
05-Aug-2017 04:26:50 | Get:16 http://archive.ubuntu.com/ubuntu xenial/universe amd64 netcat all 1.10-41 [3438 B] |
05-Aug-2017 04:26:50 | Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-pip-whl all 8.1.1-2ubuntu0.4 [1110 kB] |
05-Aug-2017 04:26:51 | Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-pip all 8.1.1-2ubuntu0.4 [144 kB] |
05-Aug-2017 04:26:51 | debconf: delaying package configuration, since apt-utils is not installed |
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05-Aug-2017 04:26:51 | Preparing to unpack .../libpython2.7-minimal_2.7.12-1ubuntu0~16.04.1_amd64.deb ... |
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05-Aug-2017 04:26:52 | Selecting previously unselected package python2.7-minimal. |
05-Aug-2017 04:26:52 | Preparing to unpack .../python2.7-minimal_2.7.12-1ubuntu0~16.04.1_amd64.deb ... |
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05-Aug-2017 04:26:52 | Preparing to unpack .../python-minimal_2.7.11-1_amd64.deb ... |
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05-Aug-2017 04:26:53 | Unpacking mime-support (3.59ubuntu1) ... |
05-Aug-2017 04:26:53 | Selecting previously unselected package libexpat1:amd64. |
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05-Aug-2017 04:26:57 | Processing triggers for libc-bin (2.23-0ubuntu9) ... |
05-Aug-2017 04:26:57 | Setting up libpython2.7-minimal:amd64 (2.7.12-1ubuntu0~16.04.1) ... |
05-Aug-2017 04:26:57 | Setting up python2.7-minimal (2.7.12-1ubuntu0~16.04.1) ... |
05-Aug-2017 04:26:58 | Linking and byte-compiling packages for runtime python2.7... |
05-Aug-2017 04:26:58 | Setting up python-minimal (2.7.11-1) ... |
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05-Aug-2017 04:26:58 | Preparing to unpack .../python_2.7.11-1_amd64.deb ... |
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05-Aug-2017 04:26:59 | Unpacking netcat (1.10-41) ... |
05-Aug-2017 04:26:59 | Selecting previously unselected package python-pip-whl. |
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05-Aug-2017 04:27:00 | Selecting previously unselected package python-pip. |
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05-Aug-2017 04:27:00 | Setting up mime-support (3.59ubuntu1) ... |
05-Aug-2017 04:27:00 | Setting up libexpat1:amd64 (2.1.0-7ubuntu0.16.04.3) ... |
05-Aug-2017 04:27:00 | Setting up libffi6:amd64 (3.2.1-4) ... |
05-Aug-2017 04:27:01 | Setting up libsqlite3-0:amd64 (3.11.0-1ubuntu1) ... |
05-Aug-2017 04:27:01 | Setting up libssl1.0.0:amd64 (1.0.2g-1ubuntu4.8) ... |
05-Aug-2017 04:27:01 | debconf: unable to initialize frontend: Dialog |
05-Aug-2017 04:27:01 | debconf: (TERM is not set, so the dialog frontend is not usable.) |
05-Aug-2017 04:27:01 | debconf: falling back to frontend: Readline |
05-Aug-2017 04:27:01 | debconf: unable to initialize frontend: Readline |
05-Aug-2017 04:27:01 | debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) |
05-Aug-2017 04:27:01 | debconf: falling back to frontend: Teletype |
05-Aug-2017 04:27:01 | Setting up libpython2.7-stdlib:amd64 (2.7.12-1ubuntu0~16.04.1) ... |
05-Aug-2017 04:27:01 | Setting up python2.7 (2.7.12-1ubuntu0~16.04.1) ... |
05-Aug-2017 04:27:02 | Setting up libpython-stdlib:amd64 (2.7.11-1) ... |
05-Aug-2017 04:27:03 | Setting up python (2.7.11-1) ... |
05-Aug-2017 04:27:04 | Setting up openssl (1.0.2g-1ubuntu4.8) ... |
05-Aug-2017 04:27:04 | Setting up ca-certificates (20160104ubuntu1) ... |
05-Aug-2017 04:27:04 | debconf: unable to initialize frontend: Dialog |
05-Aug-2017 04:27:04 | debconf: (TERM is not set, so the dialog frontend is not usable.) |
05-Aug-2017 04:27:04 | debconf: falling back to frontend: Readline |
05-Aug-2017 04:27:04 | debconf: unable to initialize frontend: Readline |
05-Aug-2017 04:27:04 | debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) |
05-Aug-2017 04:27:04 | debconf: falling back to frontend: Teletype |
05-Aug-2017 04:27:05 | Setting up netcat-traditional (1.10-41) ... |
05-Aug-2017 04:27:05 | update-alternatives: using /bin/nc.traditional to provide /bin/nc (nc) in auto mode |
05-Aug-2017 04:27:05 | Setting up netcat (1.10-41) ... |
05-Aug-2017 04:27:05 | Setting up python-pip-whl (8.1.1-2ubuntu0.4) ... |
05-Aug-2017 04:27:05 | Setting up python-pip (8.1.1-2ubuntu0.4) ... |
05-Aug-2017 04:27:06 | Processing triggers for libc-bin (2.23-0ubuntu9) ... |
05-Aug-2017 04:27:06 | Processing triggers for ca-certificates (20160104ubuntu1) ... |
05-Aug-2017 04:27:06 | Updating certificates in /etc/ssl/certs... |
05-Aug-2017 04:27:07 | 173 added, 0 removed; done. |
05-Aug-2017 04:27:07 | Running hooks in /etc/ca-certificates/update.d... |
05-Aug-2017 04:27:07 | done. |
05-Aug-2017 04:27:09 | Collecting setuptools |
05-Aug-2017 04:27:09 | Downloading setuptools-36.2.7-py2.py3-none-any.whl (477kB) |
05-Aug-2017 04:27:09 | Installing collected packages: setuptools |
05-Aug-2017 04:27:10 | Successfully installed setuptools-36.2.7 |
05-Aug-2017 04:27:10 | You are using pip version 8.1.1, however version 9.0.1 is available. |
05-Aug-2017 04:27:10 | You should consider upgrading via the 'pip install --upgrade pip' command. |
05-Aug-2017 04:27:10 | Adding system user `clowder' (UID 105) ... |
05-Aug-2017 04:27:10 | Adding new user `clowder' (UID 105) with group `nogroup' ... |
05-Aug-2017 04:27:10 | Creating home directory `/home/clowder' ... |
05-Aug-2017 04:27:11 | ---> 6cf1124ded03 |
05-Aug-2017 04:27:12 | Removing intermediate container 0d426feeaa11 |
05-Aug-2017 04:27:12 | Step 4/6 : COPY pyclowder /tmp/pyclowder/pyclowder |
05-Aug-2017 04:27:12 | ---> 57c726ffb03e |
05-Aug-2017 04:27:12 | Removing intermediate container 8c79f3e4de0b |
05-Aug-2017 04:27:12 | Step 5/6 : COPY setup.py requirements.txt /tmp/pyclowder/ |
05-Aug-2017 04:27:12 | ---> 7dacbc08e0b9 |
05-Aug-2017 04:27:13 | Removing intermediate container c12055d050ab |
05-Aug-2017 04:27:13 | Step 6/6 : RUN pip install --upgrade -r /tmp/pyclowder/requirements.txt && pip install --upgrade /tmp/pyclowder && rm -rf /tmp/pyclowder |
05-Aug-2017 04:27:13 | ---> Running in ca1ec19dc204 |
05-Aug-2017 04:27:14 | Collecting enum34==1.1.6 (from -r /tmp/pyclowder/requirements.txt (line 1)) |
05-Aug-2017 04:27:14 | Downloading enum34-1.1.6-py2-none-any.whl |
05-Aug-2017 04:27:14 | Collecting pika==0.10.0 (from -r /tmp/pyclowder/requirements.txt (line 2)) |
05-Aug-2017 04:27:14 | Downloading pika-0.10.0-py2.py3-none-any.whl (92kB) |
05-Aug-2017 04:27:14 | Collecting PyYAML==3.11 (from -r /tmp/pyclowder/requirements.txt (line 3)) |
05-Aug-2017 04:27:14 | Downloading PyYAML-3.11.zip (371kB) |
05-Aug-2017 04:27:14 | Collecting requests==2.10.0 (from -r /tmp/pyclowder/requirements.txt (line 4)) |
05-Aug-2017 04:27:14 | Downloading requests-2.10.0-py2.py3-none-any.whl (506kB) |
05-Aug-2017 04:27:14 | Collecting wheel==0.24.0 (from -r /tmp/pyclowder/requirements.txt (line 5)) |
05-Aug-2017 04:27:14 | Downloading wheel-0.24.0-py2.py3-none-any.whl (63kB) |
05-Aug-2017 04:27:14 | Collecting pytest==3.0.3 (from -r /tmp/pyclowder/requirements.txt (line 6)) |
05-Aug-2017 04:27:14 | Downloading pytest-3.0.3-py2.py3-none-any.whl (169kB) |
05-Aug-2017 04:27:14 | Collecting pytest-pep8==1.0.6 (from -r /tmp/pyclowder/requirements.txt (line 7)) |
05-Aug-2017 04:27:14 | Downloading pytest-pep8-1.0.6.tar.gz |
05-Aug-2017 04:27:15 | Collecting urllib3==1.14 (from -r /tmp/pyclowder/requirements.txt (line 8)) |
05-Aug-2017 04:27:15 | Downloading urllib3-1.14-py2.py3-none-any.whl (89kB) |
05-Aug-2017 04:27:15 | Collecting py>=1.4.29 (from pytest==3.0.3->-r /tmp/pyclowder/requirements.txt (line 6)) |
05-Aug-2017 04:27:15 | Downloading py-1.4.34-py2.py3-none-any.whl (84kB) |
05-Aug-2017 04:27:15 | Collecting pytest-cache (from pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7)) |
05-Aug-2017 04:27:15 | Downloading pytest-cache-1.0.tar.gz |
05-Aug-2017 04:27:15 | Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7)) |
05-Aug-2017 04:27:15 | Downloading pep8-1.7.0-py2.py3-none-any.whl (41kB) |
05-Aug-2017 04:27:15 | Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7)) |
05-Aug-2017 04:27:15 | Downloading execnet-1.4.1-py2.py3-none-any.whl (40kB) |
05-Aug-2017 04:27:15 | Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7)) |
05-Aug-2017 04:27:15 | Downloading apipkg-1.4-py2.py3-none-any.whl |
05-Aug-2017 04:27:15 | Building wheels for collected packages: PyYAML, pytest-pep8, pytest-cache |
05-Aug-2017 04:27:15 | Running setup.py bdist_wheel for PyYAML: started |
05-Aug-2017 04:27:15 | Running setup.py bdist_wheel for PyYAML: finished with status 'error' |
05-Aug-2017 04:27:15 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-sB5hzm/PyYAML/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpwnpVEapip-wheel- --python-tag cp27: |
05-Aug-2017 04:27:15 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
05-Aug-2017 04:27:15 | or: -c --help [cmd1 cmd2 ...] |
05-Aug-2017 04:27:15 | or: -c --help-commands |
05-Aug-2017 04:27:15 | or: -c cmd --help |
05-Aug-2017 04:27:15 | |
05-Aug-2017 04:27:15 | error: invalid command 'bdist_wheel' |
05-Aug-2017 04:27:15 | |
05-Aug-2017 04:27:15 | ---------------------------------------- |
05-Aug-2017 04:27:15 | Failed building wheel for PyYAML |
05-Aug-2017 04:27:15 | Running setup.py clean for PyYAML |
05-Aug-2017 04:27:15 | Running setup.py bdist_wheel for pytest-pep8: started |
05-Aug-2017 04:27:16 | Running setup.py bdist_wheel for pytest-pep8: finished with status 'error' |
05-Aug-2017 04:27:16 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-sB5hzm/pytest-pep8/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpGASAt3pip-wheel- --python-tag cp27: |
05-Aug-2017 04:27:16 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
05-Aug-2017 04:27:16 | or: -c --help [cmd1 cmd2 ...] |
05-Aug-2017 04:27:16 | or: -c --help-commands |
05-Aug-2017 04:27:16 | or: -c cmd --help |
05-Aug-2017 04:27:16 | |
05-Aug-2017 04:27:16 | error: invalid command 'bdist_wheel' |
05-Aug-2017 04:27:16 | |
05-Aug-2017 04:27:16 | ---------------------------------------- |
05-Aug-2017 04:27:16 | Failed building wheel for pytest-pep8 |
05-Aug-2017 04:27:16 | Running setup.py clean for pytest-pep8 |
05-Aug-2017 04:27:16 | Running setup.py bdist_wheel for pytest-cache: started |
05-Aug-2017 04:27:16 | Running setup.py bdist_wheel for pytest-cache: finished with status 'error' |
05-Aug-2017 04:27:16 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-sB5hzm/pytest-cache/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpX9YyKrpip-wheel- --python-tag cp27: |
05-Aug-2017 04:27:16 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
05-Aug-2017 04:27:16 | or: -c --help [cmd1 cmd2 ...] |
05-Aug-2017 04:27:16 | or: -c --help-commands |
05-Aug-2017 04:27:16 | or: -c cmd --help |
05-Aug-2017 04:27:16 | |
05-Aug-2017 04:27:16 | error: invalid command 'bdist_wheel' |
05-Aug-2017 04:27:16 | |
05-Aug-2017 04:27:16 | ---------------------------------------- |
05-Aug-2017 04:27:16 | Failed building wheel for pytest-cache |
05-Aug-2017 04:27:16 | Running setup.py clean for pytest-cache |
05-Aug-2017 04:27:16 | Failed to build PyYAML pytest-pep8 pytest-cache |
05-Aug-2017 04:27:16 | Installing collected packages: enum34, pika, PyYAML, requests, wheel, py, pytest, apipkg, execnet, pytest-cache, pep8, pytest-pep8, urllib3 |
05-Aug-2017 04:27:16 | Running setup.py install for PyYAML: started |
05-Aug-2017 04:27:16 | Running setup.py install for PyYAML: finished with status 'done' |
05-Aug-2017 04:27:17 | Running setup.py install for pytest-cache: started |
05-Aug-2017 04:27:17 | Running setup.py install for pytest-cache: finished with status 'done' |
05-Aug-2017 04:27:17 | Running setup.py install for pytest-pep8: started |
05-Aug-2017 04:27:17 | Running setup.py install for pytest-pep8: finished with status 'done' |
05-Aug-2017 04:27:17 | Successfully installed PyYAML-3.11 apipkg-1.4 enum34-1.1.6 execnet-1.4.1 pep8-1.7.0 pika-0.10.0 py-1.4.34 pytest-3.0.3 pytest-cache-1.0 pytest-pep8-1.0.6 requests-2.10.0 urllib3-1.14 wheel-0.24.0 |
05-Aug-2017 04:27:18 | You are using pip version 8.1.1, however version 9.0.1 is available. |
05-Aug-2017 04:27:18 | You should consider upgrading via the 'pip install --upgrade pip' command. |
05-Aug-2017 04:27:18 | Processing /tmp/pyclowder |
05-Aug-2017 04:27:18 | Installing collected packages: pyclowder |
05-Aug-2017 04:27:18 | Running setup.py install for pyclowder: started |
05-Aug-2017 04:27:19 | Running setup.py install for pyclowder: finished with status 'done' |
05-Aug-2017 04:27:19 | Successfully installed pyclowder-2.0.0 |
05-Aug-2017 04:27:19 | You are using pip version 8.1.1, however version 9.0.1 is available. |
05-Aug-2017 04:27:19 | You should consider upgrading via the 'pip install --upgrade pip' command. |
05-Aug-2017 04:27:20 | ---> 3d93b0ad517a |
05-Aug-2017 04:27:20 | Removing intermediate container ca1ec19dc204 |
05-Aug-2017 04:27:20 | Successfully built 3d93b0ad517a |
05-Aug-2017 04:27:20 | Untagged: 22261:latest |
05-Aug-2017 04:27:20 | Sending build context to Docker daemon 11.78 kB |
05-Aug-2017 04:27:20 | |
05-Aug-2017 04:27:20 | Step 1/7 : FROM clowder/pyclowder:2 |
05-Aug-2017 04:27:20 | ---> 3d93b0ad517a |
05-Aug-2017 04:27:20 | Step 2/7 : MAINTAINER Rob Kooper <kooper@illinois.edu> |
05-Aug-2017 04:27:20 | ---> Running in a8a409c5fe3d |
05-Aug-2017 04:27:21 | ---> e69224d86a7d |
05-Aug-2017 04:27:21 | Removing intermediate container a8a409c5fe3d |
05-Aug-2017 04:27:21 | Step 3/7 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_QUEUE "ncsa.wordcount" REGISTRATION_ENDPOINTS "https://clowder.ncsa.illinois.edu/extractors" MAIN_SCRIPT "wordcount.py" |
05-Aug-2017 04:27:21 | ---> Running in 5fd93aa671cb |
05-Aug-2017 04:27:22 | ---> 2030abc117c1 |
05-Aug-2017 04:27:22 | Removing intermediate container 5fd93aa671cb |
05-Aug-2017 04:27:22 | Step 4/7 : USER clowder |
05-Aug-2017 04:27:22 | ---> Running in 4dc147612e6f |
05-Aug-2017 04:27:22 | ---> 08ceb6142b80 |
05-Aug-2017 04:27:23 | Removing intermediate container 4dc147612e6f |
05-Aug-2017 04:27:23 | Step 5/7 : COPY entrypoint.sh *.py extractor_info.json /home/clowder/ |
05-Aug-2017 04:27:23 | ---> f0a7a582eb7b |
05-Aug-2017 04:27:24 | Removing intermediate container 860cd4f305bf |
05-Aug-2017 04:27:24 | Step 6/7 : ENTRYPOINT /home/clowder/entrypoint.sh |
05-Aug-2017 04:27:24 | ---> Running in 53fc78f2e154 |
05-Aug-2017 04:27:26 | ---> 2af597187b03 |
05-Aug-2017 04:27:26 | Removing intermediate container 53fc78f2e154 |
05-Aug-2017 04:27:26 | Step 7/7 : CMD extractor |
05-Aug-2017 04:27:26 | ---> Running in 17941947b773 |
05-Aug-2017 04:27:26 | ---> 84fc511d5b8f |
05-Aug-2017 04:27:26 | Removing intermediate container 17941947b773 |
05-Aug-2017 04:27:26 | Successfully built 84fc511d5b8f |
05-Aug-2017 04:27:26 | Untagged: 22261:latest |
05-Aug-2017 04:27:26 | Untagged: clowder/pyclowder:latest |
05-Aug-2017 04:27:26 | Untagged: clowder/extractors-wordcount:latest |
05-Aug-2017 04:27:26 | Finished task 'docker build and push' with result: Success |
05-Aug-2017 04:27:26 | Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit' |
05-Aug-2017 04:27:26 | Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC246-JOB1... |
05-Aug-2017 04:27:26 | Finished task 'test results' with result: Success |
05-Aug-2017 04:27:26 | Running post build plugin 'Docker Container Cleanup' |
05-Aug-2017 04:27:26 | Running post build plugin 'NCover Results Collector' |
05-Aug-2017 04:27:26 | Running post build plugin 'Clover Results Collector' |
05-Aug-2017 04:27:26 | Running post build plugin 'npm Cache Cleanup' |
05-Aug-2017 04:27:26 | Running post build plugin 'Artifact Copier' |
05-Aug-2017 04:27:26 | Finalising the build... |
05-Aug-2017 04:27:26 | Stopping timer. |
05-Aug-2017 04:27:26 | Build CATS-PYC246-JOB1-2 completed. |
05-Aug-2017 04:27:27 | Running on server: post build plugin 'NCover Results Collector' |
05-Aug-2017 04:27:27 | Running on server: post build plugin 'Build Hanging Detection Configuration' |
05-Aug-2017 04:27:27 | Running on server: post build plugin 'Clover Delta Calculator' |
05-Aug-2017 04:27:27 | Running on server: post build plugin 'Maven Dependencies Postprocessor' |
05-Aug-2017 04:27:27 | All post build plugins have finished |
05-Aug-2017 04:27:27 | Generating build results summary... |
05-Aug-2017 04:27:27 | Saving build results to disk... |
05-Aug-2017 04:27:27 | Logging substituted variables... |
05-Aug-2017 04:27:27 | Indexing build results... |
05-Aug-2017 04:27:27 | Finished building CATS-PYC246-JOB1-2. |