Build: #3 was successful

Job: Default Job was successful

Stages & jobs

  1. Default Stage

Build log

The build generated 444 lines of output. Download or view full build log.

10-Sep-2017 15:39:24 Build Clowder - pyclowder2 - CATS-784-python3-compatible - Default Job #3 (CATS-PYC248-JOB1-3) started building on agent buildserver-3.os.ncsa.edu
10-Sep-2017 15:39:24 Remote agent on host buildserver-3.os.ncsa.edu
10-Sep-2017 15:39:24 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1
10-Sep-2017 15:39:24 Executing build Clowder - pyclowder2 - CATS-784-python3-compatible - Default Job #3 (CATS-PYC248-JOB1-3)
10-Sep-2017 15:39:24 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
10-Sep-2017 15:39:24 Updating source code to revision: 1d0a7c69c9f673c0c2961f9afea19d9d5ba93a88
10-Sep-2017 15:39:24 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1/.git'.
10-Sep-2017 15:39:24 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1/.git/
10-Sep-2017 15:39:24 Fetching 'refs/heads/CATS-784-python3-compatible' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git'. Will try to do a shallow fetch.
10-Sep-2017 15:39:25 Warning: Permanently added '[127.0.0.1]:43595' (RSA) to the list of known hosts.
10-Sep-2017 15:39:25 From ssh://127.0.0.1:43595/cats/pyclowder2
10-Sep-2017 15:39:25 * [new branch]      CATS-784-python3-compatible -> CATS-784-python3-compatible
10-Sep-2017 15:39:25 Checking out revision 1d0a7c69c9f673c0c2961f9afea19d9d5ba93a88.
10-Sep-2017 15:39:25 Switched to branch 'CATS-784-python3-compatible'
10-Sep-2017 15:39:25 Updated source code to revision: 1d0a7c69c9f673c0c2961f9afea19d9d5ba93a88
10-Sep-2017 15:39:25 Finished task 'Checkout Default Repository' with result: Success
10-Sep-2017 15:39:25 Running pre-build action: VCS Version Collector
10-Sep-2017 15:39:25 Starting task 'pytest' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
10-Sep-2017 15:39:25
Beginning to execute external process for build 'Clowder - pyclowder2 - CATS-784-python3-compatible - Default Job #3 (CATS-PYC248-JOB1-3)'
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10-Sep-2017 15:39:25 New python executable in /tmp/virtualenv/pyclowder2/bin/python2
10-Sep-2017 15:39:25 Also creating executable in /tmp/virtualenv/pyclowder2/bin/python
10-Sep-2017 15:39:27 Installing setuptools, pkg_resources, pip, wheel...done.
10-Sep-2017 15:39:27 Running virtualenv with interpreter /usr/bin/python2
10-Sep-2017 15:39:28 Collecting enum34==1.1.6 (from -r requirements.txt (line 1))
10-Sep-2017 15:39:28   Using cached enum34-1.1.6-py2-none-any.whl
10-Sep-2017 15:39:28 Collecting pika==0.10.0 (from -r requirements.txt (line 2))
10-Sep-2017 15:39:28   Using cached pika-0.10.0-py2.py3-none-any.whl
10-Sep-2017 15:39:28 Collecting PyYAML==3.11 (from -r requirements.txt (line 3))
10-Sep-2017 15:39:28 Collecting requests==2.10.0 (from -r requirements.txt (line 4))
10-Sep-2017 15:39:28   Using cached requests-2.10.0-py2.py3-none-any.whl
10-Sep-2017 15:39:28 Collecting wheel==0.24.0 (from -r requirements.txt (line 5))
10-Sep-2017 15:39:28   Using cached wheel-0.24.0-py2.py3-none-any.whl
10-Sep-2017 15:39:28 Collecting pytest==3.0.3 (from -r requirements.txt (line 6))
10-Sep-2017 15:39:28   Using cached pytest-3.0.3-py2.py3-none-any.whl
10-Sep-2017 15:39:28 Collecting pytest-pep8==1.0.6 (from -r requirements.txt (line 7))
10-Sep-2017 15:39:28 Collecting urllib3==1.14 (from -r requirements.txt (line 8))
10-Sep-2017 15:39:28   Using cached urllib3-1.14-py2.py3-none-any.whl
10-Sep-2017 15:39:28 Collecting py>=1.4.29 (from pytest==3.0.3->-r requirements.txt (line 6))
10-Sep-2017 15:39:28   Using cached py-1.4.34-py2.py3-none-any.whl
10-Sep-2017 15:39:28 Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r requirements.txt (line 7))
10-Sep-2017 15:39:28   Using cached pep8-1.7.0-py2.py3-none-any.whl
10-Sep-2017 15:39:28 Collecting pytest-cache (from pytest-pep8==1.0.6->-r requirements.txt (line 7))
10-Sep-2017 15:39:29 Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 7))
10-Sep-2017 15:39:29   Using cached execnet-1.4.1-py2.py3-none-any.whl
10-Sep-2017 15:39:29 Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 7))
10-Sep-2017 15:39:29   Using cached apipkg-1.4-py2.py3-none-any.whl
10-Sep-2017 15:39:29 Installing collected packages: enum34, pika, PyYAML, requests, wheel, py, pytest, pep8, apipkg, execnet, pytest-cache, pytest-pep8, urllib3
10-Sep-2017 15:39:29   Found existing installation: wheel 0.30.0a0
10-Sep-2017 15:39:29     Uninstalling wheel-0.30.0a0:
10-Sep-2017 15:39:29       Successfully uninstalled wheel-0.30.0a0
10-Sep-2017 15:39:29 Successfully installed PyYAML-3.11 apipkg-1.4 enum34-1.1.6 execnet-1.4.1 pep8-1.7.0 pika-0.10.0 py-1.4.34 pytest-3.0.3 pytest-cache-1.0 pytest-pep8-1.0.6 requests-2.10.0 urllib3-1.14 wheel-0.24.0
10-Sep-2017 15:39:30 ============================= test session starts ==============================
10-Sep-2017 15:39:30 platform linux2 -- Python 2.7.12, pytest-3.0.3, py-1.4.34, pluggy-0.4.0
10-Sep-2017 15:39:30 rootdir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1, inifile: setup.cfg
10-Sep-2017 15:39:30 plugins: pep8-1.0.6
10-Sep-2017 15:39:30 collected 12 items
10-Sep-2017 15:39:30
10-Sep-2017 15:39:30 setup.py .
10-Sep-2017 15:39:30 pyclowder/__init__.py .
10-Sep-2017 15:39:30 pyclowder/collections.py .
10-Sep-2017 15:39:30 pyclowder/connectors.py .
10-Sep-2017 15:39:30 pyclowder/datasets.py .
10-Sep-2017 15:39:30 pyclowder/extractors.py .
10-Sep-2017 15:39:30 pyclowder/files.py .
10-Sep-2017 15:39:30 pyclowder/geostreams.py .
10-Sep-2017 15:39:30 pyclowder/sections.py .
10-Sep-2017 15:39:30 pyclowder/utils.py .
10-Sep-2017 15:39:30 sample-extractors/echo/echo.py .
10-Sep-2017 15:39:30 sample-extractors/wordcount/wordcount.py .
10-Sep-2017 15:39:30
10-Sep-2017 15:39:30 generated xml file: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1/test-reports/results.xml
10-Sep-2017 15:39:30 ========================== 12 passed in 0.23 seconds ===========================
10-Sep-2017 15:39:30 Finished task 'pytest' with result: Success
10-Sep-2017 15:39:30 Starting task 'docker build and push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
10-Sep-2017 15:39:30
Beginning to execute external process for build 'Clowder - pyclowder2 - CATS-784-python3-compatible - Default Job #3 (CATS-PYC248-JOB1-3)'
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10-Sep-2017 15:39:30 Sending build context to Docker daemon 136.2 kB
10-Sep-2017 15:39:30
10-Sep-2017 15:39:30 Step 1/6 : FROM ubuntu:16.04
10-Sep-2017 15:39:30 16.04: Pulling from library/ubuntu
10-Sep-2017 15:39:30 d5c6f90da05d: Pulling fs layer
10-Sep-2017 15:39:30 1300883d87d5: Pulling fs layer
10-Sep-2017 15:39:30 c220aa3cfc1b: Pulling fs layer
10-Sep-2017 15:39:30 2e9398f099dc: Pulling fs layer
10-Sep-2017 15:39:30 dc27a084064f: Pulling fs layer
10-Sep-2017 15:39:30 dc27a084064f: Waiting
10-Sep-2017 15:39:30 2e9398f099dc: Waiting
10-Sep-2017 15:39:31 1300883d87d5: Download complete
10-Sep-2017 15:39:31 c220aa3cfc1b: Verifying Checksum
10-Sep-2017 15:39:31 c220aa3cfc1b: Download complete
10-Sep-2017 15:39:31 dc27a084064f: Verifying Checksum
10-Sep-2017 15:39:31 dc27a084064f: Download complete
10-Sep-2017 15:39:31 2e9398f099dc: Verifying Checksum
10-Sep-2017 15:39:31 2e9398f099dc: Download complete
10-Sep-2017 15:39:32 d5c6f90da05d: Download complete
10-Sep-2017 15:39:36 d5c6f90da05d: Pull complete
10-Sep-2017 15:39:36 1300883d87d5: Pull complete
10-Sep-2017 15:39:36 c220aa3cfc1b: Pull complete
10-Sep-2017 15:39:36 2e9398f099dc: Pull complete
10-Sep-2017 15:39:36 dc27a084064f: Pull complete
10-Sep-2017 15:39:36 Digest: sha256:34471448724419596ca4e890496d375801de21b0e67b81a77fd6155ce001edad
10-Sep-2017 15:39:36 Status: Downloaded newer image for ubuntu:16.04
10-Sep-2017 15:39:36 ---> ccc7a11d65b1
10-Sep-2017 15:39:36 Step 2/6 : MAINTAINER Rob Kooper <kooper@illinois.edu>
10-Sep-2017 15:39:36 ---> Running in b56100d21655
10-Sep-2017 15:39:37 ---> 41bae0a556e1
10-Sep-2017 15:39:37 Removing intermediate container b56100d21655
10-Sep-2017 15:39:37 Step 3/6 : RUN apt-get -q -q update && apt-get install -y --no-install-recommends         netcat         python         python-pip     && pip install --upgrade setuptools     && rm -rf /var/lib/apt/lists/*     && adduser --system clowder
10-Sep-2017 15:39:37 ---> Running in 520719cf0dca
10-Sep-2017 15:39:41 Reading package lists...
10-Sep-2017 15:39:41 Building dependency tree...
10-Sep-2017 15:39:41 Reading state information...
10-Sep-2017 15:39:41 The following additional packages will be installed:
10-Sep-2017 15:39:41   ca-certificates libexpat1 libffi6 libpython-stdlib libpython2.7-minimal
10-Sep-2017 15:39:41   libpython2.7-stdlib libsqlite3-0 libssl1.0.0 mime-support netcat-traditional
10-Sep-2017 15:39:41   openssl python-minimal python-pip-whl python2.7 python2.7-minimal
10-Sep-2017 15:39:41 Suggested packages:
10-Sep-2017 15:39:41   python-doc python-tk python2.7-doc binutils binfmt-support
10-Sep-2017 15:39:41 Recommended packages:
10-Sep-2017 15:39:41   file build-essential python-all-dev python-setuptools python-wheel
10-Sep-2017 15:39:41 The following NEW packages will be installed:
10-Sep-2017 15:39:41   ca-certificates libexpat1 libffi6 libpython-stdlib libpython2.7-minimal
10-Sep-2017 15:39:41   libpython2.7-stdlib libsqlite3-0 libssl1.0.0 mime-support netcat
10-Sep-2017 15:39:41   netcat-traditional openssl python python-minimal python-pip python-pip-whl
10-Sep-2017 15:39:41   python2.7 python2.7-minimal
10-Sep-2017 15:39:41 0 upgraded, 18 newly installed, 0 to remove and 0 not upgraded.
10-Sep-2017 15:39:41 Need to get 7514 kB of archives.
10-Sep-2017 15:39:41 After this operation, 25.1 MB of additional disk space will be used.
10-Sep-2017 15:39:41 Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-minimal amd64 2.7.12-1ubuntu0~16.04.1 [339 kB]
10-Sep-2017 15:39:42 Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7-minimal amd64 2.7.12-1ubuntu0~16.04.1 [1295 kB]
10-Sep-2017 15:39:42 Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-minimal amd64 2.7.11-1 [28.2 kB]
10-Sep-2017 15:39:42 Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 mime-support all 3.59ubuntu1 [31.0 kB]
10-Sep-2017 15:39:42 Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1 amd64 2.1.0-7ubuntu0.16.04.3 [71.2 kB]
10-Sep-2017 15:39:42 Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 libffi6 amd64 3.2.1-4 [17.8 kB]
10-Sep-2017 15:39:42 Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsqlite3-0 amd64 3.11.0-1ubuntu1 [396 kB]
10-Sep-2017 15:39:42 Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libssl1.0.0 amd64 1.0.2g-1ubuntu4.8 [1081 kB]
10-Sep-2017 15:39:42 Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-stdlib amd64 2.7.12-1ubuntu0~16.04.1 [1884 kB]
10-Sep-2017 15:39:42 Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7 amd64 2.7.12-1ubuntu0~16.04.1 [224 kB]
10-Sep-2017 15:39:42 Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpython-stdlib amd64 2.7.11-1 [7656 B]
10-Sep-2017 15:39:42 Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 python amd64 2.7.11-1 [137 kB]
10-Sep-2017 15:39:42 Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 openssl amd64 1.0.2g-1ubuntu4.8 [492 kB]
10-Sep-2017 15:39:42 Get:14 http://archive.ubuntu.com/ubuntu xenial/main amd64 ca-certificates all 20160104ubuntu1 [191 kB]
10-Sep-2017 15:39:42 Get:15 http://archive.ubuntu.com/ubuntu xenial/universe amd64 netcat-traditional amd64 1.10-41 [60.7 kB]
10-Sep-2017 15:39:42 Get:16 http://archive.ubuntu.com/ubuntu xenial/universe amd64 netcat all 1.10-41 [3438 B]
10-Sep-2017 15:39:42 Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-pip-whl all 8.1.1-2ubuntu0.4 [1110 kB]
10-Sep-2017 15:39:42 Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-pip all 8.1.1-2ubuntu0.4 [144 kB]
10-Sep-2017 15:39:42 debconf: delaying package configuration, since apt-utils is not installed
10-Sep-2017 15:39:42 Fetched 7514 kB in 1s (6160 kB/s)
10-Sep-2017 15:39:42 Selecting previously unselected package libpython2.7-minimal:amd64.
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10-Sep-2017 15:39:42 (Reading database ... 4768 files and directories currently installed.)
10-Sep-2017 15:39:42 Preparing to unpack .../libpython2.7-minimal_2.7.12-1ubuntu0~16.04.1_amd64.deb ...
10-Sep-2017 15:39:42 Unpacking libpython2.7-minimal:amd64 (2.7.12-1ubuntu0~16.04.1) ...
10-Sep-2017 15:39:43 Selecting previously unselected package python2.7-minimal.
10-Sep-2017 15:39:43 Preparing to unpack .../python2.7-minimal_2.7.12-1ubuntu0~16.04.1_amd64.deb ...
10-Sep-2017 15:39:43 Unpacking python2.7-minimal (2.7.12-1ubuntu0~16.04.1) ...
10-Sep-2017 15:39:44 Selecting previously unselected package python-minimal.
10-Sep-2017 15:39:44 Preparing to unpack .../python-minimal_2.7.11-1_amd64.deb ...
10-Sep-2017 15:39:44 Unpacking python-minimal (2.7.11-1) ...
10-Sep-2017 15:39:44 Selecting previously unselected package mime-support.
10-Sep-2017 15:39:44 Preparing to unpack .../mime-support_3.59ubuntu1_all.deb ...
10-Sep-2017 15:39:44 Unpacking mime-support (3.59ubuntu1) ...
10-Sep-2017 15:39:44 Selecting previously unselected package libexpat1:amd64.
10-Sep-2017 15:39:44 Preparing to unpack .../libexpat1_2.1.0-7ubuntu0.16.04.3_amd64.deb ...
10-Sep-2017 15:39:45 Unpacking libexpat1:amd64 (2.1.0-7ubuntu0.16.04.3) ...
10-Sep-2017 15:39:45 Selecting previously unselected package libffi6:amd64.
10-Sep-2017 15:39:45 Preparing to unpack .../libffi6_3.2.1-4_amd64.deb ...
10-Sep-2017 15:39:45 Unpacking libffi6:amd64 (3.2.1-4) ...
10-Sep-2017 15:39:46 Selecting previously unselected package libsqlite3-0:amd64.
10-Sep-2017 15:39:46 Preparing to unpack .../libsqlite3-0_3.11.0-1ubuntu1_amd64.deb ...
10-Sep-2017 15:39:46 Unpacking libsqlite3-0:amd64 (3.11.0-1ubuntu1) ...
10-Sep-2017 15:39:46 Selecting previously unselected package libssl1.0.0:amd64.
10-Sep-2017 15:39:46 Preparing to unpack .../libssl1.0.0_1.0.2g-1ubuntu4.8_amd64.deb ...
10-Sep-2017 15:39:46 Unpacking libssl1.0.0:amd64 (1.0.2g-1ubuntu4.8) ...
10-Sep-2017 15:39:46 Selecting previously unselected package libpython2.7-stdlib:amd64.
10-Sep-2017 15:39:46 Preparing to unpack .../libpython2.7-stdlib_2.7.12-1ubuntu0~16.04.1_amd64.deb ...
10-Sep-2017 15:39:46 Unpacking libpython2.7-stdlib:amd64 (2.7.12-1ubuntu0~16.04.1) ...
10-Sep-2017 15:39:48 Selecting previously unselected package python2.7.
10-Sep-2017 15:39:48 Preparing to unpack .../python2.7_2.7.12-1ubuntu0~16.04.1_amd64.deb ...
10-Sep-2017 15:39:48 Unpacking python2.7 (2.7.12-1ubuntu0~16.04.1) ...
10-Sep-2017 15:39:48 Selecting previously unselected package libpython-stdlib:amd64.
10-Sep-2017 15:39:48 Preparing to unpack .../libpython-stdlib_2.7.11-1_amd64.deb ...
10-Sep-2017 15:39:48 Unpacking libpython-stdlib:amd64 (2.7.11-1) ...
10-Sep-2017 15:39:48 Processing triggers for libc-bin (2.23-0ubuntu9) ...
10-Sep-2017 15:39:49 Setting up libpython2.7-minimal:amd64 (2.7.12-1ubuntu0~16.04.1) ...
10-Sep-2017 15:39:49 Setting up python2.7-minimal (2.7.12-1ubuntu0~16.04.1) ...
10-Sep-2017 15:39:49 Linking and byte-compiling packages for runtime python2.7...
10-Sep-2017 15:39:49 Setting up python-minimal (2.7.11-1) ...
10-Sep-2017 15:39:49 Selecting previously unselected package python.
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10-Sep-2017 15:39:49 (Reading database ... 5579 files and directories currently installed.)
10-Sep-2017 15:39:49 Preparing to unpack .../python_2.7.11-1_amd64.deb ...
10-Sep-2017 15:39:50 Unpacking python (2.7.11-1) ...
10-Sep-2017 15:39:50 Selecting previously unselected package openssl.
10-Sep-2017 15:39:50 Preparing to unpack .../openssl_1.0.2g-1ubuntu4.8_amd64.deb ...
10-Sep-2017 15:39:50 Unpacking openssl (1.0.2g-1ubuntu4.8) ...
10-Sep-2017 15:39:50 Selecting previously unselected package ca-certificates.
10-Sep-2017 15:39:50 Preparing to unpack .../ca-certificates_20160104ubuntu1_all.deb ...
10-Sep-2017 15:39:50 Unpacking ca-certificates (20160104ubuntu1) ...
10-Sep-2017 15:39:51 Selecting previously unselected package netcat-traditional.
10-Sep-2017 15:39:51 Preparing to unpack .../netcat-traditional_1.10-41_amd64.deb ...
10-Sep-2017 15:39:51 Unpacking netcat-traditional (1.10-41) ...
10-Sep-2017 15:39:51 Selecting previously unselected package netcat.
10-Sep-2017 15:39:51 Preparing to unpack .../netcat_1.10-41_all.deb ...
10-Sep-2017 15:39:51 Unpacking netcat (1.10-41) ...
10-Sep-2017 15:39:51 Selecting previously unselected package python-pip-whl.
10-Sep-2017 15:39:51 Preparing to unpack .../python-pip-whl_8.1.1-2ubuntu0.4_all.deb ...
10-Sep-2017 15:39:51 Unpacking python-pip-whl (8.1.1-2ubuntu0.4) ...
10-Sep-2017 15:39:51 Selecting previously unselected package python-pip.
10-Sep-2017 15:39:51 Preparing to unpack .../python-pip_8.1.1-2ubuntu0.4_all.deb ...
10-Sep-2017 15:39:51 Unpacking python-pip (8.1.1-2ubuntu0.4) ...
10-Sep-2017 15:39:52 Setting up mime-support (3.59ubuntu1) ...
10-Sep-2017 15:39:52 Setting up libexpat1:amd64 (2.1.0-7ubuntu0.16.04.3) ...
10-Sep-2017 15:39:52 Setting up libffi6:amd64 (3.2.1-4) ...
10-Sep-2017 15:39:52 Setting up libsqlite3-0:amd64 (3.11.0-1ubuntu1) ...
10-Sep-2017 15:39:52 Setting up libssl1.0.0:amd64 (1.0.2g-1ubuntu4.8) ...
10-Sep-2017 15:39:52 debconf: unable to initialize frontend: Dialog
10-Sep-2017 15:39:52 debconf: (TERM is not set, so the dialog frontend is not usable.)
10-Sep-2017 15:39:52 debconf: falling back to frontend: Readline
10-Sep-2017 15:39:52 debconf: unable to initialize frontend: Readline
10-Sep-2017 15:39:52 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.)
10-Sep-2017 15:39:52 debconf: falling back to frontend: Teletype
10-Sep-2017 15:39:52 Setting up libpython2.7-stdlib:amd64 (2.7.12-1ubuntu0~16.04.1) ...
10-Sep-2017 15:39:52 Setting up python2.7 (2.7.12-1ubuntu0~16.04.1) ...
10-Sep-2017 15:39:53 Setting up libpython-stdlib:amd64 (2.7.11-1) ...
10-Sep-2017 15:39:53 Setting up python (2.7.11-1) ...
10-Sep-2017 15:39:53 Setting up openssl (1.0.2g-1ubuntu4.8) ...
10-Sep-2017 15:39:53 Setting up ca-certificates (20160104ubuntu1) ...
10-Sep-2017 15:39:53 debconf: unable to initialize frontend: Dialog
10-Sep-2017 15:39:53 debconf: (TERM is not set, so the dialog frontend is not usable.)
10-Sep-2017 15:39:53 debconf: falling back to frontend: Readline
10-Sep-2017 15:39:53 debconf: unable to initialize frontend: Readline
10-Sep-2017 15:39:53 debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.)
10-Sep-2017 15:39:53 debconf: falling back to frontend: Teletype
10-Sep-2017 15:39:53 Setting up netcat-traditional (1.10-41) ...
10-Sep-2017 15:39:53 update-alternatives: using /bin/nc.traditional to provide /bin/nc (nc) in auto mode
10-Sep-2017 15:39:53 Setting up netcat (1.10-41) ...
10-Sep-2017 15:39:53 Setting up python-pip-whl (8.1.1-2ubuntu0.4) ...
10-Sep-2017 15:39:54 Setting up python-pip (8.1.1-2ubuntu0.4) ...
10-Sep-2017 15:39:54 Processing triggers for libc-bin (2.23-0ubuntu9) ...
10-Sep-2017 15:39:54 Processing triggers for ca-certificates (20160104ubuntu1) ...
10-Sep-2017 15:39:54 Updating certificates in /etc/ssl/certs...
10-Sep-2017 15:39:55 173 added, 0 removed; done.
10-Sep-2017 15:39:55 Running hooks in /etc/ca-certificates/update.d...
10-Sep-2017 15:39:55 done.
10-Sep-2017 15:39:56 Collecting setuptools
10-Sep-2017 15:39:56   Downloading setuptools-36.4.0-py2.py3-none-any.whl (478kB)
10-Sep-2017 15:39:56 Installing collected packages: setuptools
10-Sep-2017 15:39:56 Successfully installed setuptools-36.4.0
10-Sep-2017 15:39:57 You are using pip version 8.1.1, however version 9.0.1 is available.
10-Sep-2017 15:39:57 You should consider upgrading via the 'pip install --upgrade pip' command.
10-Sep-2017 15:39:57 Adding system user `clowder' (UID 105) ...
10-Sep-2017 15:39:57 Adding new user `clowder' (UID 105) with group `nogroup' ...
10-Sep-2017 15:39:57 Creating home directory `/home/clowder' ...
10-Sep-2017 15:39:58 ---> 1338fe7e1fde
10-Sep-2017 15:39:58 Removing intermediate container 520719cf0dca
10-Sep-2017 15:39:58 Step 4/6 : COPY pyclowder /tmp/pyclowder/pyclowder
10-Sep-2017 15:39:58 ---> 56172fadfd1f
10-Sep-2017 15:39:58 Removing intermediate container 71df32b2219e
10-Sep-2017 15:39:58 Step 5/6 : COPY setup.py requirements.txt /tmp/pyclowder/
10-Sep-2017 15:39:59 ---> 3dbe787f4347
10-Sep-2017 15:39:59 Removing intermediate container bba5e52e969a
10-Sep-2017 15:39:59 Step 6/6 : RUN pip install --upgrade  -r /tmp/pyclowder/requirements.txt     && pip install --upgrade /tmp/pyclowder     && rm -rf /tmp/pyclowder
10-Sep-2017 15:39:59 ---> Running in 4ca775efac6e
10-Sep-2017 15:40:00 Collecting enum34==1.1.6 (from -r /tmp/pyclowder/requirements.txt (line 1))
10-Sep-2017 15:40:00   Downloading enum34-1.1.6-py2-none-any.whl
10-Sep-2017 15:40:00 Collecting pika==0.10.0 (from -r /tmp/pyclowder/requirements.txt (line 2))
10-Sep-2017 15:40:00   Downloading pika-0.10.0-py2.py3-none-any.whl (92kB)
10-Sep-2017 15:40:00 Collecting PyYAML==3.11 (from -r /tmp/pyclowder/requirements.txt (line 3))
10-Sep-2017 15:40:00   Downloading PyYAML-3.11.zip (371kB)
10-Sep-2017 15:40:00 Collecting requests==2.10.0 (from -r /tmp/pyclowder/requirements.txt (line 4))
10-Sep-2017 15:40:00   Downloading requests-2.10.0-py2.py3-none-any.whl (506kB)
10-Sep-2017 15:40:00 Collecting wheel==0.24.0 (from -r /tmp/pyclowder/requirements.txt (line 5))
10-Sep-2017 15:40:00   Downloading wheel-0.24.0-py2.py3-none-any.whl (63kB)
10-Sep-2017 15:40:00 Collecting pytest==3.0.3 (from -r /tmp/pyclowder/requirements.txt (line 6))
10-Sep-2017 15:40:00   Downloading pytest-3.0.3-py2.py3-none-any.whl (169kB)
10-Sep-2017 15:40:01 Collecting pytest-pep8==1.0.6 (from -r /tmp/pyclowder/requirements.txt (line 7))
10-Sep-2017 15:40:01   Downloading pytest-pep8-1.0.6.tar.gz
10-Sep-2017 15:40:01 Collecting urllib3==1.14 (from -r /tmp/pyclowder/requirements.txt (line 8))
10-Sep-2017 15:40:01   Downloading urllib3-1.14-py2.py3-none-any.whl (89kB)
10-Sep-2017 15:40:01 Collecting py>=1.4.29 (from pytest==3.0.3->-r /tmp/pyclowder/requirements.txt (line 6))
10-Sep-2017 15:40:01   Downloading py-1.4.34-py2.py3-none-any.whl (84kB)
10-Sep-2017 15:40:01 Collecting pytest-cache (from pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7))
10-Sep-2017 15:40:01   Downloading pytest-cache-1.0.tar.gz
10-Sep-2017 15:40:01 Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7))
10-Sep-2017 15:40:01   Downloading pep8-1.7.0-py2.py3-none-any.whl (41kB)
10-Sep-2017 15:40:01 Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7))
10-Sep-2017 15:40:01   Downloading execnet-1.4.1-py2.py3-none-any.whl (40kB)
10-Sep-2017 15:40:01 Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7))
10-Sep-2017 15:40:01   Downloading apipkg-1.4-py2.py3-none-any.whl
10-Sep-2017 15:40:01 Building wheels for collected packages: PyYAML, pytest-pep8, pytest-cache
10-Sep-2017 15:40:01   Running setup.py bdist_wheel for PyYAML: started
10-Sep-2017 15:40:01   Running setup.py bdist_wheel for PyYAML: finished with status 'error'
10-Sep-2017 15:40:01   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-qXWEIA/PyYAML/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpzUxmKCpip-wheel- --python-tag cp27:
10-Sep-2017 15:40:01   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
10-Sep-2017 15:40:01      or: -c --help [cmd1 cmd2 ...]
10-Sep-2017 15:40:01      or: -c --help-commands
10-Sep-2017 15:40:01      or: -c cmd --help
10-Sep-2017 15:40:01  
10-Sep-2017 15:40:01   error: invalid command 'bdist_wheel'
10-Sep-2017 15:40:01  
10-Sep-2017 15:40:01   ----------------------------------------
10-Sep-2017 15:40:01   Running setup.py clean for PyYAML
10-Sep-2017 15:40:01   Failed building wheel for PyYAML
10-Sep-2017 15:40:01   Running setup.py bdist_wheel for pytest-pep8: started
10-Sep-2017 15:40:02   Running setup.py bdist_wheel for pytest-pep8: finished with status 'error'
10-Sep-2017 15:40:02   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-qXWEIA/pytest-pep8/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmp3X3HwSpip-wheel- --python-tag cp27:
10-Sep-2017 15:40:02   Failed building wheel for pytest-pep8
10-Sep-2017 15:40:02   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
10-Sep-2017 15:40:02      or: -c --help [cmd1 cmd2 ...]
10-Sep-2017 15:40:02      or: -c --help-commands
10-Sep-2017 15:40:02      or: -c cmd --help
10-Sep-2017 15:40:02  
10-Sep-2017 15:40:02   error: invalid command 'bdist_wheel'
10-Sep-2017 15:40:02  
10-Sep-2017 15:40:02   ----------------------------------------
10-Sep-2017 15:40:02   Running setup.py clean for pytest-pep8
10-Sep-2017 15:40:02   Running setup.py bdist_wheel for pytest-cache: started
10-Sep-2017 15:40:02   Running setup.py bdist_wheel for pytest-cache: finished with status 'error'
10-Sep-2017 15:40:02   Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-qXWEIA/pytest-cache/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpY5Qc5spip-wheel- --python-tag cp27:
10-Sep-2017 15:40:02   usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
10-Sep-2017 15:40:02      or: -c --help [cmd1 cmd2 ...]
10-Sep-2017 15:40:02      or: -c --help-commands
10-Sep-2017 15:40:02      or: -c cmd --help
10-Sep-2017 15:40:02  
10-Sep-2017 15:40:02   error: invalid command 'bdist_wheel'
10-Sep-2017 15:40:02  
10-Sep-2017 15:40:02   ----------------------------------------
10-Sep-2017 15:40:02   Failed building wheel for pytest-cache
10-Sep-2017 15:40:02   Running setup.py clean for pytest-cache
10-Sep-2017 15:40:02 Failed to build PyYAML pytest-pep8 pytest-cache
10-Sep-2017 15:40:02 Installing collected packages: enum34, pika, PyYAML, requests, wheel, py, pytest, apipkg, execnet, pytest-cache, pep8, pytest-pep8, urllib3
10-Sep-2017 15:40:02   Running setup.py install for PyYAML: started
10-Sep-2017 15:40:02     Running setup.py install for PyYAML: finished with status 'done'
10-Sep-2017 15:40:03   Running setup.py install for pytest-cache: started
10-Sep-2017 15:40:03     Running setup.py install for pytest-cache: finished with status 'done'
10-Sep-2017 15:40:03   Running setup.py install for pytest-pep8: started
10-Sep-2017 15:40:03     Running setup.py install for pytest-pep8: finished with status 'done'
10-Sep-2017 15:40:03 Successfully installed PyYAML-3.11 apipkg-1.4 enum34-1.1.6 execnet-1.4.1 pep8-1.7.0 pika-0.10.0 py-1.4.34 pytest-3.0.3 pytest-cache-1.0 pytest-pep8-1.0.6 requests-2.10.0 urllib3-1.14 wheel-0.24.0
10-Sep-2017 15:40:04 You are using pip version 8.1.1, however version 9.0.1 is available.
10-Sep-2017 15:40:04 You should consider upgrading via the 'pip install --upgrade pip' command.
10-Sep-2017 15:40:04 Processing /tmp/pyclowder
10-Sep-2017 15:40:04 Installing collected packages: pyclowder
10-Sep-2017 15:40:04   Running setup.py install for pyclowder: started
10-Sep-2017 15:40:05     Running setup.py install for pyclowder: finished with status 'done'
10-Sep-2017 15:40:05 Successfully installed pyclowder-2.0.0
10-Sep-2017 15:40:05 You are using pip version 8.1.1, however version 9.0.1 is available.
10-Sep-2017 15:40:05 You should consider upgrading via the 'pip install --upgrade pip' command.
10-Sep-2017 15:40:14 ---> 45be3cebdef7
10-Sep-2017 15:40:14 Removing intermediate container 4ca775efac6e
10-Sep-2017 15:40:14 Successfully built 45be3cebdef7
10-Sep-2017 15:40:14 Untagged: 6435:latest
10-Sep-2017 15:40:14 Sending build context to Docker daemon 11.78 kB
10-Sep-2017 15:40:14
10-Sep-2017 15:40:14 Step 1/7 : FROM clowder/pyclowder:2
10-Sep-2017 15:40:14 ---> 45be3cebdef7
10-Sep-2017 15:40:14 Step 2/7 : MAINTAINER Rob Kooper <kooper@illinois.edu>
10-Sep-2017 15:40:14 ---> Running in 57f85c46cfd8
10-Sep-2017 15:40:14 ---> 751d1141691b
10-Sep-2017 15:40:14 Removing intermediate container 57f85c46cfd8
10-Sep-2017 15:40:14 Step 3/7 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_QUEUE "ncsa.wordcount" REGISTRATION_ENDPOINTS "https://clowder.ncsa.illinois.edu/extractors" MAIN_SCRIPT "wordcount.py"
10-Sep-2017 15:40:15 ---> Running in 3e6306668389
10-Sep-2017 15:40:15 ---> f7f2781a0dbc
10-Sep-2017 15:40:15 Removing intermediate container 3e6306668389
10-Sep-2017 15:40:15 Step 4/7 : USER clowder
10-Sep-2017 15:40:15 ---> Running in 451de18c3e1f
10-Sep-2017 15:40:15 ---> 848a521694a6
10-Sep-2017 15:40:15 Removing intermediate container 451de18c3e1f
10-Sep-2017 15:40:15 Step 5/7 : COPY entrypoint.sh *.py extractor_info.json /home/clowder/
10-Sep-2017 15:40:16 ---> cf3f25a0eb0c
10-Sep-2017 15:40:16 Removing intermediate container f0dc13efd0d8
10-Sep-2017 15:40:16 Step 6/7 : ENTRYPOINT /home/clowder/entrypoint.sh
10-Sep-2017 15:40:16 ---> Running in bfa14fc889f1
10-Sep-2017 15:40:16 ---> 66b149925784
10-Sep-2017 15:40:16 Removing intermediate container bfa14fc889f1
10-Sep-2017 15:40:16 Step 7/7 : CMD extractor
10-Sep-2017 15:40:16 ---> Running in a0a5d847e49d
10-Sep-2017 15:40:17 ---> 9f9467a82ade
10-Sep-2017 15:40:17 Removing intermediate container a0a5d847e49d
10-Sep-2017 15:40:17 Successfully built 9f9467a82ade
10-Sep-2017 15:40:17 Untagged: 6435:latest
10-Sep-2017 15:40:17 Untagged: clowder/pyclowder:latest
10-Sep-2017 15:40:17 Untagged: clowder/extractors-wordcount:latest
10-Sep-2017 15:40:17 Finished task 'docker build and push' with result: Success
10-Sep-2017 15:40:17 Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit'
10-Sep-2017 15:40:17 Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1...
10-Sep-2017 15:40:17 Finished task 'test results' with result: Success
10-Sep-2017 15:40:17 Running post build plugin 'Docker Container Cleanup'
10-Sep-2017 15:40:17 Running post build plugin 'NCover Results Collector'
10-Sep-2017 15:40:17 Running post build plugin 'Clover Results Collector'
10-Sep-2017 15:40:17 Running post build plugin 'npm Cache Cleanup'
10-Sep-2017 15:40:17 Running post build plugin 'Artifact Copier'
10-Sep-2017 15:40:17 Finalising the build...
10-Sep-2017 15:40:17 Stopping timer.
10-Sep-2017 15:40:17 Build CATS-PYC248-JOB1-3 completed.
10-Sep-2017 15:40:17 Running on server: post build plugin 'NCover Results Collector'
10-Sep-2017 15:40:17 Running on server: post build plugin 'Build Hanging Detection Configuration'
10-Sep-2017 15:40:17 Running on server: post build plugin 'Clover Delta Calculator'
10-Sep-2017 15:40:17 Running on server: post build plugin 'Maven Dependencies Postprocessor'
10-Sep-2017 15:40:17 All post build plugins have finished
10-Sep-2017 15:40:17 Generating build results summary...
10-Sep-2017 15:40:17 Saving build results to disk...
10-Sep-2017 15:40:17 Logging substituted variables...
10-Sep-2017 15:40:17 Indexing build results...
10-Sep-2017 15:40:17 Finished building CATS-PYC248-JOB1-3.