Build #26

Plan branch:
Next Generation of pyClowder

Build: #26 was successful

Job: Default Job was successful

Stages & jobs

  1. Default Stage

Build log

The build generated 4,306 lines of output.   The output is too long and has been truncated to the last 1,000 lines. Download or view full build log.

13-Jun-2019 14:04:11 Setting up libxt6:amd64 (1:1.1.5-0ubuntu1) ...
13-Jun-2019 14:04:12 Setting up pkg-config (0.29.1-0ubuntu1) ...
13-Jun-2019 14:04:13 Setting up zip (3.0-11) ...
13-Jun-2019 14:04:13 Setting up unzip (6.0-20ubuntu1) ...
13-Jun-2019 14:04:13 Setting up xdg-utils (1.1.1-1ubuntu1.16.04.3) ...
13-Jun-2019 14:04:13 Setting up r-base-core (3.4.4-1xenial0) ...
13-Jun-2019 14:04:14 debconf: unable to initialize frontend: Dialog
13-Jun-2019 14:04:14 debconf: (TERM is not set, so the dialog frontend is not usable.)
13-Jun-2019 14:04:14 debconf: falling back to frontend: Readline
13-Jun-2019 14:04:14
13-Jun-2019 14:04:14 Creating config file /etc/R/Renviron with new version
13-Jun-2019 14:04:14 Setting up liblzma-dev:amd64 (5.1.1alpha+20120614-2ubuntu2) ...
13-Jun-2019 14:04:15 Setting up debhelper (9.20160115ubuntu3) ...
13-Jun-2019 14:04:15 Setting up libwww-perl (6.15-1) ...
13-Jun-2019 14:04:15 Setting up libxml-parser-perl (2.44-1build1) ...
13-Jun-2019 14:04:15 Setting up intltool (0.51.0-2ubuntu1.16.04.1) ...
13-Jun-2019 14:04:16 Setting up dh-translations (129) ...
13-Jun-2019 14:04:16 Setting up cdbs (0.4.130ubuntu2) ...
13-Jun-2019 14:04:16 Setting up r-base-dev (3.4.4-1xenial0) ...
13-Jun-2019 14:04:17 Setting up dh-strip-nondeterminism (0.015-1) ...
13-Jun-2019 14:04:17 Setting up liblwp-protocol-https-perl (6.06-2) ...
13-Jun-2019 14:04:17 Processing triggers for libc-bin (2.23-0ubuntu11) ...
13-Jun-2019 14:04:17 Processing triggers for systemd (229-4ubuntu21.21) ...
13-Jun-2019 14:04:17 Processing triggers for ca-certificates (20170717~16.04.2) ...
13-Jun-2019 14:04:17 Updating certificates in /etc/ssl/certs...
13-Jun-2019 14:04:19 148 added, 0 removed; done.
13-Jun-2019 14:04:19 Running hooks in /etc/ca-certificates/update.d...
13-Jun-2019 14:04:19 done.
13-Jun-2019 14:04:19 Installing package into '/usr/local/lib/R/site-library'
13-Jun-2019 14:04:19 (as 'lib' is unspecified)
13-Jun-2019 14:04:20 trying URL 'http://cran.rstudio.com/src/contrib/jsonlite_1.6.tar.gz'
13-Jun-2019 14:04:20 Content type 'application/x-gzip' length 1052728 bytes (1.0 MB)
13-Jun-2019 14:04:20 ==================================================
13-Jun-2019 14:04:20 downloaded 1.0 MB
13-Jun-2019 14:04:20
13-Jun-2019 14:04:21 * installing *source* package 'jsonlite' ...
13-Jun-2019 14:04:21 ** package 'jsonlite' successfully unpacked and MD5 sums checked
13-Jun-2019 14:04:21 ** libs
13-Jun-2019 14:04:21 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c base64.c -o base64.o
13-Jun-2019 14:04:21 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c collapse_array.c -o collapse_array.o
13-Jun-2019 14:04:21 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c collapse_object.c -o collapse_object.o
13-Jun-2019 14:04:21 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c collapse_pretty.c -o collapse_pretty.o
13-Jun-2019 14:04:21 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c escape_chars.c -o escape_chars.o
13-Jun-2019 14:04:21 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c integer64_to_na.c -o integer64_to_na.o
13-Jun-2019 14:04:21 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c is_datelist.c -o is_datelist.o
13-Jun-2019 14:04:21 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c is_recordlist.c -o is_recordlist.o
13-Jun-2019 14:04:21 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c is_scalarlist.c -o is_scalarlist.o
13-Jun-2019 14:04:21 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c modp_numtoa.c -o modp_numtoa.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c null_to_na.c -o null_to_na.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c num_to_char.c -o num_to_char.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c parse.c -o parse.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c prettify.c -o prettify.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c push_parser.c -o push_parser.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c r-base64.c -o r-base64.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c register.c -o register.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c row_collapse.c -o row_collapse.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c transpose_list.c -o transpose_list.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c validate.c -o validate.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c yajl/yajl.c -o yajl/yajl.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o
13-Jun-2019 14:04:22 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c yajl/yajl_buf.c -o yajl/yajl_buf.o
13-Jun-2019 14:04:23 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c yajl/yajl_encode.c -o yajl/yajl_encode.o
13-Jun-2019 14:04:23 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c yajl/yajl_gen.c -o yajl/yajl_gen.o
13-Jun-2019 14:04:23 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c yajl/yajl_lex.c -o yajl/yajl_lex.o
13-Jun-2019 14:04:23 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c yajl/yajl_parser.c -o yajl/yajl_parser.o
13-Jun-2019 14:04:23 gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api    -fvisibility=hidden  -fpic  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c yajl/yajl_tree.c -o yajl/yajl_tree.o
13-Jun-2019 14:04:23 ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o
13-Jun-2019 14:04:23 g++ -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/usr/lib/R/lib -lR
13-Jun-2019 14:04:23 installing to /usr/local/lib/R/site-library/jsonlite/libs
13-Jun-2019 14:04:23 ** R
13-Jun-2019 14:04:23 ** inst
13-Jun-2019 14:04:23 ** preparing package for lazy loading
13-Jun-2019 14:04:24 ** help
13-Jun-2019 14:04:24 *** installing help indices
13-Jun-2019 14:04:24 ** building package indices
13-Jun-2019 14:04:24 ** installing vignettes
13-Jun-2019 14:04:24 ** testing if installed package can be loaded
13-Jun-2019 14:04:24 * DONE (jsonlite)
13-Jun-2019 14:04:24
13-Jun-2019 14:04:24 The downloaded source packages are in
13-Jun-2019 14:04:24         '/tmp/RtmprWQL0f/downloaded_packages'
13-Jun-2019 14:04:24 [1] "/usr/local/lib/R/site-library/jsonlite"
13-Jun-2019 14:04:31 Removing intermediate container e5fb60cebd57
13-Jun-2019 14:04:31 ---> 6461ee32cb15
13-Jun-2019 14:04:31 Step 5/11 : COPY r_extractor.py launcher.R /home/clowder/
13-Jun-2019 14:04:32 ---> bde468b5efe3
13-Jun-2019 14:04:32 Step 6/11 : ONBUILD COPY packages.* Dockerfile /home/clowder/
13-Jun-2019 14:04:32 ---> Running in 16e5d54b6b32
13-Jun-2019 14:04:33 Removing intermediate container 16e5d54b6b32
13-Jun-2019 14:04:33 ---> 9c1d955d71a5
13-Jun-2019 14:04:33 Step 7/11 : ONBUILD RUN if [ -e packages.apt ]; then                 apt-get -q -q update                 && xargs apt-get -y install --no-install-recommends < packages.apt                 && rm -rf /var/lib/apt/lists/*;             fi
13-Jun-2019 14:04:33 ---> Running in 6a149b071590
13-Jun-2019 14:04:34 Removing intermediate container 6a149b071590
13-Jun-2019 14:04:34 ---> c4471858fc1a
13-Jun-2019 14:04:34 Step 8/11 : ONBUILD COPY docker.R* Dockerfile /home/clowder/
13-Jun-2019 14:04:34 ---> Running in c1ac725dc2d4
13-Jun-2019 14:04:34 Removing intermediate container c1ac725dc2d4
13-Jun-2019 14:04:34 ---> ed2f779ed2e5
13-Jun-2019 14:04:34 Step 9/11 : ONBUILD RUN if [ -e docker.R ]; then                 Rscript docker.R;             fi
13-Jun-2019 14:04:34 ---> Running in 84098ee0ed98
13-Jun-2019 14:04:35 Removing intermediate container 84098ee0ed98
13-Jun-2019 14:04:35 ---> 138d9883c002
13-Jun-2019 14:04:35 Step 10/11 : ONBUILD ADD . /home/clowder/
13-Jun-2019 14:04:35 ---> Running in 341e8710437f
13-Jun-2019 14:04:36 Removing intermediate container 341e8710437f
13-Jun-2019 14:04:36 ---> e8b8236b7872
13-Jun-2019 14:04:36 Step 11/11 : CMD python r_extractor.py
13-Jun-2019 14:04:36 ---> Running in 8cd3f2c4193c
13-Jun-2019 14:04:37 Removing intermediate container 8cd3f2c4193c
13-Jun-2019 14:04:37 ---> 2229a5ffe618
13-Jun-2019 14:04:37 Successfully built 2229a5ffe618
13-Jun-2019 14:04:37 Successfully tagged clowder/extractors-simple-r-extractor-python3:onbuild
13-Jun-2019 14:04:37 Sending build context to Docker daemon  9.216kB
13-Jun-2019 14:04:37
13-Jun-2019 14:04:37 Step 1/3 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:04:37 Step 2/3 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:onbuild
13-Jun-2019 14:04:37 # Executing 5 build triggers
13-Jun-2019 14:04:38 ---> Running in 5a62f3d377f0
13-Jun-2019 14:04:41 Removing intermediate container 5a62f3d377f0
13-Jun-2019 14:04:41 ---> Running in 3963f2492d56
13-Jun-2019 14:04:43 Removing intermediate container 3963f2492d56
13-Jun-2019 14:04:44 ---> 370ad528054a
13-Jun-2019 14:04:44 Step 3/3 : ENV MAIN_SCRIPT="wordcount.py"
13-Jun-2019 14:04:44 ---> Running in 22cb3c1ab638
13-Jun-2019 14:04:45 Removing intermediate container 22cb3c1ab638
13-Jun-2019 14:04:45 ---> 1ab046751304
13-Jun-2019 14:04:45 Successfully built 1ab046751304
13-Jun-2019 14:04:45 Successfully tagged clowder/extractors-wordcount:latest
13-Jun-2019 14:04:45 Sending build context to Docker daemon   5.12kB
13-Jun-2019 14:04:45
13-Jun-2019 14:04:45 Step 1/4 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:04:45 Step 2/4 : FROM clowder/extractors-simple-extractor${PYCLOWDER_PYTHON}:onbuild
13-Jun-2019 14:04:45 # Executing 5 build triggers
13-Jun-2019 14:04:46 ---> Running in 577e4bbfd38f
13-Jun-2019 14:04:48 Removing intermediate container 577e4bbfd38f
13-Jun-2019 14:04:49 ---> Running in 06d4354b18de
13-Jun-2019 14:04:51 Removing intermediate container 06d4354b18de
13-Jun-2019 14:04:52 ---> 206b223257b6
13-Jun-2019 14:04:52 Step 3/4 : ENV EXTRACTION_FUNC="wordcount"
13-Jun-2019 14:04:52 ---> Running in 89047e54e022
13-Jun-2019 14:04:52 Removing intermediate container 89047e54e022
13-Jun-2019 14:04:52 ---> e502d7d05dca
13-Jun-2019 14:04:52 Step 4/4 : ENV EXTRACTION_MODULE="wordcount"
13-Jun-2019 14:04:53 ---> Running in aaa713228b02
13-Jun-2019 14:04:53 Removing intermediate container aaa713228b02
13-Jun-2019 14:04:53 ---> 31e635562be9
13-Jun-2019 14:04:53 Successfully built 31e635562be9
13-Jun-2019 14:04:53 Successfully tagged clowder/extractors-wordcount-simple-extractor:latest
13-Jun-2019 14:04:53 Sending build context to Docker daemon   5.12kB
13-Jun-2019 14:04:53
13-Jun-2019 14:04:53 Step 1/3 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:04:53 Step 2/3 : FROM clowder/extractors-simple-r-extractor${PYCLOWDER_PYTHON}:onbuild
13-Jun-2019 14:04:53 # Executing 5 build triggers
13-Jun-2019 14:04:54 ---> Running in 6d1842a96211
13-Jun-2019 14:04:56 Removing intermediate container 6d1842a96211
13-Jun-2019 14:04:56 ---> Running in 49d411466d91
13-Jun-2019 14:04:59 Removing intermediate container 49d411466d91
13-Jun-2019 14:05:02 ---> 1142415a3b65
13-Jun-2019 14:05:02 Step 3/3 : ENV R_SCRIPT="wordcount.R"     R_FUNCTION="process_file"
13-Jun-2019 14:05:03 ---> Running in 825e839594cf
13-Jun-2019 14:05:03 Removing intermediate container 825e839594cf
13-Jun-2019 14:05:03 ---> bdd2d86593fa
13-Jun-2019 14:05:03 Successfully built bdd2d86593fa
13-Jun-2019 14:05:04 Successfully tagged clowder/extractors-wordcount-simple-r-extractor:latest
13-Jun-2019 14:05:04 Sending build context to Docker daemon  8.192kB
13-Jun-2019 14:05:04
13-Jun-2019 14:05:04 Step 1/7 : FROM python:3.5
13-Jun-2019 14:05:04 3.5: Pulling from library/python
13-Jun-2019 14:05:04 6f2f362378c5: Already exists
13-Jun-2019 14:05:04 494c27a8a6b8: Already exists
13-Jun-2019 14:05:05 7596bb83081b: Already exists
13-Jun-2019 14:05:05 372744b62d49: Already exists
13-Jun-2019 14:05:05 615db220d76c: Already exists
13-Jun-2019 14:05:05 1865698adfb0: Pulling fs layer
13-Jun-2019 14:05:05 c506c1442a1e: Pulling fs layer
13-Jun-2019 14:05:05 79230d91d387: Pulling fs layer
13-Jun-2019 14:05:05 8db41df01a2f: Pulling fs layer
13-Jun-2019 14:05:05 8db41df01a2f: Waiting
13-Jun-2019 14:05:05 79230d91d387: Download complete
13-Jun-2019 14:05:05 1865698adfb0: Verifying Checksum
13-Jun-2019 14:05:05 1865698adfb0: Download complete
13-Jun-2019 14:05:05 8db41df01a2f: Verifying Checksum
13-Jun-2019 14:05:05 8db41df01a2f: Download complete
13-Jun-2019 14:05:06 c506c1442a1e: Verifying Checksum
13-Jun-2019 14:05:06 c506c1442a1e: Download complete
13-Jun-2019 14:05:06 1865698adfb0: Pull complete
13-Jun-2019 14:05:07 c506c1442a1e: Pull complete
13-Jun-2019 14:05:07 79230d91d387: Pull complete
13-Jun-2019 14:05:08 8db41df01a2f: Pull complete
13-Jun-2019 14:05:08 Digest: sha256:6f69a14679ebf9be7613517da5153830ed7b43c15f6e60920ce1699897fe8cde
13-Jun-2019 14:05:08 Status: Downloaded newer image for python:3.5
13-Jun-2019 14:05:08 ---> 6da24b346f6e
13-Jun-2019 14:05:08 Step 2/7 : ENV RABBITMQ_URI="amqp://guest:guest@rabbitmq/%2F"
13-Jun-2019 14:05:08 ---> Running in 41399a3e5d4c
13-Jun-2019 14:05:09 Removing intermediate container 41399a3e5d4c
13-Jun-2019 14:05:09 ---> 72a49b95dac2
13-Jun-2019 14:05:09 Step 3/7 : EXPOSE 9999
13-Jun-2019 14:05:09 ---> Running in 1e04ce5e2d58
13-Jun-2019 14:05:10 Removing intermediate container 1e04ce5e2d58
13-Jun-2019 14:05:10 ---> 4f6df31b0a4c
13-Jun-2019 14:05:10 Step 4/7 : RUN pip install pika==0.11.2 requests==2.18.4
13-Jun-2019 14:05:11 ---> Running in c9e8e8b274f6
13-Jun-2019 14:05:13 Collecting pika==0.11.2
13-Jun-2019 14:05:13   Downloading https://files.pythonhosted.org/packages/76/b4/0ada6918ac79ce4d8d45d0ba436ee21a1ef685047fb1dde4d2de0178b327/pika-0.11.2-py2.py3-none-any.whl (107kB)
13-Jun-2019 14:05:13 Collecting requests==2.18.4
13-Jun-2019 14:05:13   Downloading https://files.pythonhosted.org/packages/49/df/50aa1999ab9bde74656c2919d9c0c085fd2b3775fd3eca826012bef76d8c/requests-2.18.4-py2.py3-none-any.whl (88kB)
13-Jun-2019 14:05:13 Collecting idna<2.7,>=2.5 (from requests==2.18.4)
13-Jun-2019 14:05:13   Downloading https://files.pythonhosted.org/packages/27/cc/6dd9a3869f15c2edfab863b992838277279ce92663d334df9ecf5106f5c6/idna-2.6-py2.py3-none-any.whl (56kB)
13-Jun-2019 14:05:13 Collecting chardet<3.1.0,>=3.0.2 (from requests==2.18.4)
13-Jun-2019 14:05:13   Downloading https://files.pythonhosted.org/packages/bc/a9/01ffebfb562e4274b6487b4bb1ddec7ca55ec7510b22e4c51f14098443b8/chardet-3.0.4-py2.py3-none-any.whl (133kB)
13-Jun-2019 14:05:13 Collecting urllib3<1.23,>=1.21.1 (from requests==2.18.4)
13-Jun-2019 14:05:14   Downloading https://files.pythonhosted.org/packages/63/cb/6965947c13a94236f6d4b8223e21beb4d576dc72e8130bd7880f600839b8/urllib3-1.22-py2.py3-none-any.whl (132kB)
13-Jun-2019 14:05:14 Collecting certifi>=2017.4.17 (from requests==2.18.4)
13-Jun-2019 14:05:14   Downloading https://files.pythonhosted.org/packages/60/75/f692a584e85b7eaba0e03827b3d51f45f571c2e793dd731e598828d380aa/certifi-2019.3.9-py2.py3-none-any.whl (158kB)
13-Jun-2019 14:05:14 Installing collected packages: pika, idna, chardet, urllib3, certifi, requests
13-Jun-2019 14:05:14 Successfully installed certifi-2019.3.9 chardet-3.0.4 idna-2.6 pika-0.11.2 requests-2.18.4 urllib3-1.22
13-Jun-2019 14:05:16 Removing intermediate container c9e8e8b274f6
13-Jun-2019 14:05:16 ---> 6f9384d1c585
13-Jun-2019 14:05:16 Step 5/7 : WORKDIR /src
13-Jun-2019 14:05:16 ---> Running in 659e6b829d04
13-Jun-2019 14:05:16 Removing intermediate container 659e6b829d04
13-Jun-2019 14:05:16 ---> b9a8af134eef
13-Jun-2019 14:05:16 Step 6/7 : COPY monitor.py /src/
13-Jun-2019 14:05:17 ---> 13e25baf95cc
13-Jun-2019 14:05:17 Step 7/7 : CMD python monitor.py
13-Jun-2019 14:05:17 ---> Running in ee3891ac3d6c
13-Jun-2019 14:05:18 Removing intermediate container ee3891ac3d6c
13-Jun-2019 14:05:18 ---> 6a5f15b08f7f
13-Jun-2019 14:05:18 Successfully built 6a5f15b08f7f
13-Jun-2019 14:05:18 Successfully tagged clowder/extractors-monitor:latest
13-Jun-2019 14:05:18 Finished task 'docker build' with result: Success
13-Jun-2019 14:05:18 Starting task 'docker push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
13-Jun-2019 14:05:18
Beginning to execute external process for build 'Clowder - pyclowder2 - develop - Default Job #26 (CATS-PYC265-JOB1-26)'
... running command line:
/bin/sh release.sh
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC265-JOB1
... using extra environment variables:
bamboo_planRepository_1_branch=develop
bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm
bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster
bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node
bamboo_capability_system_builder_command_buckminster_4_4=/home/bamboo/buckminster-4.4/buckminster
bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_planRepository_1_branchDisplayName=develop
bamboo_repository_revision_number=616e22d71839f4d365c09e2fc0c5dd508df0850d
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC265-JOB1-26
bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build
bamboo_repository_157745161_name=pyclowder2
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC265-JOB1
bamboo_planRepository_1_name=pyclowder2
bamboo_buildKey=CATS-PYC265-JOB1
bamboo_capability_system_os=linux
bamboo_shortPlanName=develop
bamboo_repository_157745161_branch_name=develop
bamboo_planRepository_name=pyclowder2
bamboo_buildNumber=26
bamboo_capability_system_builder_node_grunt_6=/home/bamboo/node-v6.9.1/bin/grunt
bamboo_shortJobName=Default Job
bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC265-JOB1-26
bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git
bamboo_agentId=140673027
bamboo_planName=Clowder - pyclowder2 - develop
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_6=/home/bamboo/bamboo-agent-home/temp/CATS-PYC265-JOB1-26-ScriptBuildTask-226820274818434517.sh
bamboo_shortPlanKey=PYC265
bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
bamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node
bamboo_shortJobKey=JOB1
bamboo_planRepository_revision=616e22d71839f4d365c09e2fc0c5dd508df0850d
bamboo_buildTimeStamp=2019-06-13T13:52:45.181-05:00
bamboo_repository_previous_revision_number=ff430c1c1f9ec22e7981cf9e6e7037663506ed70
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
bamboo_repository_157745161_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_3=/home/bamboo/bamboo-agent-home/temp/CATS-PYC265-JOB1-26-ScriptBuildTask-4135524811146440181.sh
bamboo_planRepository_previousRevision=ff430c1c1f9ec22e7981cf9e6e7037663506ed70
bamboo_repository_157745161_git_username=
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_2=/bin/sh docker.sh
bamboo_repository_git_branch=develop
bamboo_buildResultKey=CATS-PYC265-JOB1-26
bamboo_repository_branch_name=develop
bamboo_buildPlanName=Clowder - pyclowder2 - develop - Default Job
bamboo_planRepository_1_revision=616e22d71839f4d365c09e2fc0c5dd508df0850d
bamboo_capability_system_builder_command_python3=/usr/bin/python3
bamboo_repository_name=pyclowder2
bamboo_buildFailed=false
bamboo_repository_157745161_git_branch=develop
bamboo_capability_system_docker_executable=/usr/bin/docker
bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt
bamboo_planRepository_branch=develop
bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir
bamboo_repository_157745161_previous_revision_number=ff430c1c1f9ec22e7981cf9e6e7037663506ed70
bamboo_capability_system_git_executable=/usr/bin/git
bamboo_repository_git_username=
bamboo_planRepository_1_previousRevision=ff430c1c1f9ec22e7981cf9e6e7037663506ed70
bamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13
bamboo_planRepository_branchDisplayName=develop
bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs
bamboo_planRepository_1_type=bbserver
bamboo_planRepository_branchName=develop
bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7
bamboo_capability_system_hostname=buildserver-1
bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_software_mongo=/usr/bin/mongo
bamboo_plan_storageTag=plan-157548561
bamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache
bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs
bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl
bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66
bamboo_planRepository_1_username=
bamboo_planRepository_type=bbserver
bamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache
bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git
bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node
bamboo_repository_157745161_revision_number=616e22d71839f4d365c09e2fc0c5dd508df0850d
bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4
bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9
bamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp
bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC265-JOB1
bamboo_planKey=CATS-PYC265
bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git
bamboo_planRepository_username=
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_planRepository_1_branchName=develop
13-Jun-2019 14:05:18 Sending build context to Docker daemon  283.6kB
13-Jun-2019 14:05:18
13-Jun-2019 14:05:18 Step 1/10 : FROM ubuntu:16.04
13-Jun-2019 14:05:18 ---> 2a697363a870
13-Jun-2019 14:05:18 Step 2/10 : ARG PYTHON_VERSION="2.7"
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> f4feed86da16
13-Jun-2019 14:05:18 Step 3/10 : ENV PYTHON_VERSION=${PYTHON_VERSION}     RABBITMQ_URI="amqp://guest:guest@rabbitmq:5672/%2F"     RABBITMQ_EXCHANGE="clowder"     RABBITMQ_QUEUE=""     REGISTRATION_ENDPOINTS=""     EMAIL_SERVER=""     EMAIL_SENDER="extractor"     MAIN_SCRIPT=""
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> e22b1d545c21
13-Jun-2019 14:05:18 Step 4/10 : RUN apt-get -q -q update     && apt-get install -y --no-install-recommends python${PYTHON_VERSION} curl     && if [ ! -e /usr/bin/python ]; then ln -s /usr/bin/python${PYTHON_VERSION} /usr/bin/python; fi     && curl -k https://bootstrap.pypa.io/get-pip.py -o /tmp/get-pip.py     && python /tmp/get-pip.py     && pip install --upgrade setuptools     && rm -rf /var/lib/apt/lists/* /tmp/get-pip.py
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> aaa144ebfe7d
13-Jun-2019 14:05:18 Step 5/10 : COPY pyclowder /tmp/pyclowder/pyclowder
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> e4a0107c18ae
13-Jun-2019 14:05:18 Step 6/10 : COPY setup.py description.rst /tmp/pyclowder/
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> 0f7d36b68813
13-Jun-2019 14:05:18 Step 7/10 : RUN pip install --upgrade /tmp/pyclowder     && rm -rf /tmp/pyclowder
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> 728b3c9c41da
13-Jun-2019 14:05:18 Step 8/10 : WORKDIR /home/clowder
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> 58c34283b70e
13-Jun-2019 14:05:18 Step 9/10 : COPY notifications.json /home/clowder/
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> 543e953153bf
13-Jun-2019 14:05:18 Step 10/10 : CMD python "./${MAIN_SCRIPT}"
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> 3300a912153b
13-Jun-2019 14:05:18 Successfully built 3300a912153b
13-Jun-2019 14:05:18 Successfully tagged clowder/pyclowder:latest
13-Jun-2019 14:05:18 Sending build context to Docker daemon  281.6kB
13-Jun-2019 14:05:18
13-Jun-2019 14:05:18 Step 1/7 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:05:18 Step 2/7 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest
13-Jun-2019 14:05:18 ---> 3300a912153b
13-Jun-2019 14:05:18 Step 3/7 : ONBUILD COPY packages.* Dockerfile /home/clowder/
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> b6b85b8d8b00
13-Jun-2019 14:05:18 Step 4/7 : ONBUILD RUN if [ -e packages.apt ]; then                 apt-get -q -q update                 && xargs apt-get -y install --no-install-recommends < packages.apt                 && rm -rf /var/lib/apt/lists/*;             fi
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> 0e6922f64a57
13-Jun-2019 14:05:18 Step 5/7 : ONBUILD COPY requirements.txt* Dockerfile /home/clowder/
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> dbd0cd0629b3
13-Jun-2019 14:05:18 Step 6/7 : ONBUILD RUN if [ -e requirements.txt ]; then                 pip install --no-cache-dir -r requirements.txt;             fi
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> ed2c4716c793
13-Jun-2019 14:05:18 Step 7/7 : ONBUILD ADD . /home/clowder/
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> 1840c2446b9d
13-Jun-2019 14:05:18 Successfully built 1840c2446b9d
13-Jun-2019 14:05:18 Successfully tagged clowder/pyclowder:onbuild
13-Jun-2019 14:05:18 Sending build context to Docker daemon   12.8kB
13-Jun-2019 14:05:18
13-Jun-2019 14:05:18 Step 1/6 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:05:18 Step 2/6 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:onbuild
13-Jun-2019 14:05:18 # Executing 5 build triggers
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> be866ccf3efd
13-Jun-2019 14:05:18 Step 3/6 : ENV MAIN_SCRIPT="binary_extractor.py"     RABBITMQ_QUEUE=""     IMAGE_BINARY=""     IMAGE_TYPE=""     IMAGE_THUMBNAIL_COMMAND=""     IMAGE_PREVIEW_COMMAND=""     PREVIEW_BINARY=""     PREVIEW_TYPE=""     PREVIEW_COMMAND=""
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> 032dc6878fc1
13-Jun-2019 14:05:18 Step 4/6 : ONBUILD COPY packages.* Dockerfile /home/clowder/
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> 3c8e3b2eda23
13-Jun-2019 14:05:18 Step 5/6 : ONBUILD RUN if [ -e packages.apt ]; then                 apt-get -q -q update                 && xargs apt-get -y install --no-install-recommends < packages.apt                 && rm -rf /var/lib/apt/lists/*;             fi
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> 810307d51a3b
13-Jun-2019 14:05:18 Step 6/6 : ONBUILD COPY extractor_info.json /home/clowder/
13-Jun-2019 14:05:18 ---> Using cache
13-Jun-2019 14:05:18 ---> 109d9374da0d
13-Jun-2019 14:05:18 Successfully built 109d9374da0d
13-Jun-2019 14:05:19 Successfully tagged clowder/extractors-binary-preview:onbuild
13-Jun-2019 14:05:19 Sending build context to Docker daemon  6.656kB
13-Jun-2019 14:05:19
13-Jun-2019 14:05:19 Step 1/11 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:05:19 Step 2/11 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest
13-Jun-2019 14:05:19 ---> 3300a912153b
13-Jun-2019 14:05:19 Step 3/11 : ENV EXTRACTION_FUNC=""
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 73dbc176d2d2
13-Jun-2019 14:05:19 Step 4/11 : ENV EXTRACTION_MODULE=""
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 2a6099d216fc
13-Jun-2019 14:05:19 Step 5/11 : COPY simple_extractor.py .
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 465875a6c694
13-Jun-2019 14:05:19 Step 6/11 : ONBUILD COPY packages.* Dockerfile /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 6a36e11336ea
13-Jun-2019 14:05:19 Step 7/11 : ONBUILD RUN if [ -e packages.apt ]; then                 apt-get -q -q update                 && xargs apt-get -y install --no-install-recommends < packages.apt                 && rm -rf /var/lib/apt/lists/*;             fi
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 2f35116c45f7
13-Jun-2019 14:05:19 Step 8/11 : ONBUILD COPY requirements.txt* Dockerfile /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 5b99cd347f86
13-Jun-2019 14:05:19 Step 9/11 : ONBUILD RUN if [ -e requirements.txt ]; then                 pip install --no-cache-dir -r requirements.txt;             fi
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> db91e185b68b
13-Jun-2019 14:05:19 Step 10/11 : ONBUILD ADD . /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> aed8dc999606
13-Jun-2019 14:05:19 Step 11/11 : CMD python -c "from simple_extractor import SimplePythonExtractor; from ${EXTRACTION_MODULE} import *; SimplePythonExtractor(${EXTRACTION_FUNC}).start()"
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> f0a7cd935dff
13-Jun-2019 14:05:19 Successfully built f0a7cd935dff
13-Jun-2019 14:05:19 Successfully tagged clowder/extractors-simple-extractor:onbuild
13-Jun-2019 14:05:19 Sending build context to Docker daemon  13.31kB
13-Jun-2019 14:05:19
13-Jun-2019 14:05:19 Step 1/11 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:05:19 Step 2/11 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest
13-Jun-2019 14:05:19 ---> 3300a912153b
13-Jun-2019 14:05:19 Step 3/11 : ENV R_SCRIPT=""     R_FUNCTION=""
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 06126657ae81
13-Jun-2019 14:05:19 Step 4/11 : RUN echo "deb http://cran.rstudio.com/bin/linux/ubuntu xenial/" > /etc/apt/sources.list.d/R.list     && apt-key adv --keyserver keyserver.ubuntu.com --recv E084DAB9     && apt-get -q -q update     && apt-get -y install --no-install-recommends r-base-core r-base-dev     && rm -rf /var/lib/apt/lists/*     && Rscript --vanilla -e "install.packages('jsonlite', repos='http://cran.rstudio.com/'); print(system.file(package = 'jsonlite')); q(status=as.integer(system.file(package = 'jsonlite') == ''))"
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> cf7d346d62e2
13-Jun-2019 14:05:19 Step 5/11 : COPY r_extractor.py launcher.R /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 016649e272fc
13-Jun-2019 14:05:19 Step 6/11 : ONBUILD COPY packages.* Dockerfile /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 53eab3f271e2
13-Jun-2019 14:05:19 Step 7/11 : ONBUILD RUN if [ -e packages.apt ]; then                 apt-get -q -q update                 && xargs apt-get -y install --no-install-recommends < packages.apt                 && rm -rf /var/lib/apt/lists/*;             fi
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 12ad1a7e6f10
13-Jun-2019 14:05:19 Step 8/11 : ONBUILD COPY docker.R* Dockerfile /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 3dfd148fc325
13-Jun-2019 14:05:19 Step 9/11 : ONBUILD RUN if [ -e docker.R ]; then                 Rscript docker.R;             fi
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 6b3c3cf4a6c1
13-Jun-2019 14:05:19 Step 10/11 : ONBUILD ADD . /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 44f0eecc8585
13-Jun-2019 14:05:19 Step 11/11 : CMD python r_extractor.py
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> fad3c60a59bd
13-Jun-2019 14:05:19 Successfully built fad3c60a59bd
13-Jun-2019 14:05:19 Successfully tagged clowder/extractors-simple-r-extractor:onbuild
13-Jun-2019 14:05:19 Sending build context to Docker daemon  283.6kB
13-Jun-2019 14:05:19
13-Jun-2019 14:05:19 Step 1/10 : FROM ubuntu:16.04
13-Jun-2019 14:05:19 ---> 2a697363a870
13-Jun-2019 14:05:19 Step 2/10 : ARG PYTHON_VERSION="2.7"
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> f4feed86da16
13-Jun-2019 14:05:19 Step 3/10 : ENV PYTHON_VERSION=${PYTHON_VERSION}     RABBITMQ_URI="amqp://guest:guest@rabbitmq:5672/%2F"     RABBITMQ_EXCHANGE="clowder"     RABBITMQ_QUEUE=""     REGISTRATION_ENDPOINTS=""     EMAIL_SERVER=""     EMAIL_SENDER="extractor"     MAIN_SCRIPT=""
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 811a31cb8f2f
13-Jun-2019 14:05:19 Step 4/10 : RUN apt-get -q -q update     && apt-get install -y --no-install-recommends python${PYTHON_VERSION} curl     && if [ ! -e /usr/bin/python ]; then ln -s /usr/bin/python${PYTHON_VERSION} /usr/bin/python; fi     && curl -k https://bootstrap.pypa.io/get-pip.py -o /tmp/get-pip.py     && python /tmp/get-pip.py     && pip install --upgrade setuptools     && rm -rf /var/lib/apt/lists/* /tmp/get-pip.py
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 9d22e7b82373
13-Jun-2019 14:05:19 Step 5/10 : COPY pyclowder /tmp/pyclowder/pyclowder
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 04fc775c0d05
13-Jun-2019 14:05:19 Step 6/10 : COPY setup.py description.rst /tmp/pyclowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> eca9dd7f19cc
13-Jun-2019 14:05:19 Step 7/10 : RUN pip install --upgrade /tmp/pyclowder     && rm -rf /tmp/pyclowder
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> f39f996909a5
13-Jun-2019 14:05:19 Step 8/10 : WORKDIR /home/clowder
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> d914309710c7
13-Jun-2019 14:05:19 Step 9/10 : COPY notifications.json /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 5630ec6285c9
13-Jun-2019 14:05:19 Step 10/10 : CMD python "./${MAIN_SCRIPT}"
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 3a385fec96aa
13-Jun-2019 14:05:19 Successfully built 3a385fec96aa
13-Jun-2019 14:05:19 Successfully tagged clowder/pyclowder-python3:latest
13-Jun-2019 14:05:19 Sending build context to Docker daemon  281.6kB
13-Jun-2019 14:05:19
13-Jun-2019 14:05:19 Step 1/7 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:05:19 Step 2/7 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest
13-Jun-2019 14:05:19 ---> 3a385fec96aa
13-Jun-2019 14:05:19 Step 3/7 : ONBUILD COPY packages.* Dockerfile /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 97e254b16e07
13-Jun-2019 14:05:19 Step 4/7 : ONBUILD RUN if [ -e packages.apt ]; then                 apt-get -q -q update                 && xargs apt-get -y install --no-install-recommends < packages.apt                 && rm -rf /var/lib/apt/lists/*;             fi
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 324a76a515fe
13-Jun-2019 14:05:19 Step 5/7 : ONBUILD COPY requirements.txt* Dockerfile /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 0c48d7d2e398
13-Jun-2019 14:05:19 Step 6/7 : ONBUILD RUN if [ -e requirements.txt ]; then                 pip install --no-cache-dir -r requirements.txt;             fi
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 7c59aa5cd222
13-Jun-2019 14:05:19 Step 7/7 : ONBUILD ADD . /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 14d8f9ce6f9f
13-Jun-2019 14:05:19 Successfully built 14d8f9ce6f9f
13-Jun-2019 14:05:19 Successfully tagged clowder/pyclowder-python3:onbuild
13-Jun-2019 14:05:19 Sending build context to Docker daemon   12.8kB
13-Jun-2019 14:05:19
13-Jun-2019 14:05:19 Step 1/6 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:05:19 Step 2/6 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:onbuild
13-Jun-2019 14:05:19 # Executing 5 build triggers
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 41e663f246f7
13-Jun-2019 14:05:19 Step 3/6 : ENV MAIN_SCRIPT="binary_extractor.py"     RABBITMQ_QUEUE=""     IMAGE_BINARY=""     IMAGE_TYPE=""     IMAGE_THUMBNAIL_COMMAND=""     IMAGE_PREVIEW_COMMAND=""     PREVIEW_BINARY=""     PREVIEW_TYPE=""     PREVIEW_COMMAND=""
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> dd00b7626de6
13-Jun-2019 14:05:19 Step 4/6 : ONBUILD COPY packages.* Dockerfile /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 9fe8c4a8f92d
13-Jun-2019 14:05:19 Step 5/6 : ONBUILD RUN if [ -e packages.apt ]; then                 apt-get -q -q update                 && xargs apt-get -y install --no-install-recommends < packages.apt                 && rm -rf /var/lib/apt/lists/*;             fi
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> 5325346f1c76
13-Jun-2019 14:05:19 Step 6/6 : ONBUILD COPY extractor_info.json /home/clowder/
13-Jun-2019 14:05:19 ---> Using cache
13-Jun-2019 14:05:19 ---> dcba77cc65c2
13-Jun-2019 14:05:19 Successfully built dcba77cc65c2
13-Jun-2019 14:05:20 Successfully tagged clowder/extractors-binary-preview-python3:onbuild
13-Jun-2019 14:05:20 Sending build context to Docker daemon  6.656kB
13-Jun-2019 14:05:20
13-Jun-2019 14:05:20 Step 1/11 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:05:20 Step 2/11 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest
13-Jun-2019 14:05:20 ---> 3a385fec96aa
13-Jun-2019 14:05:20 Step 3/11 : ENV EXTRACTION_FUNC=""
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> afe477ae5b92
13-Jun-2019 14:05:20 Step 4/11 : ENV EXTRACTION_MODULE=""
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 0da3c27f604d
13-Jun-2019 14:05:20 Step 5/11 : COPY simple_extractor.py .
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 647dd7d7995d
13-Jun-2019 14:05:20 Step 6/11 : ONBUILD COPY packages.* Dockerfile /home/clowder/
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 7d2d922cc31a
13-Jun-2019 14:05:20 Step 7/11 : ONBUILD RUN if [ -e packages.apt ]; then                 apt-get -q -q update                 && xargs apt-get -y install --no-install-recommends < packages.apt                 && rm -rf /var/lib/apt/lists/*;             fi
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 8778eb41e924
13-Jun-2019 14:05:20 Step 8/11 : ONBUILD COPY requirements.txt* Dockerfile /home/clowder/
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> e2206b08b63e
13-Jun-2019 14:05:20 Step 9/11 : ONBUILD RUN if [ -e requirements.txt ]; then                 pip install --no-cache-dir -r requirements.txt;             fi
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> feb1c4eecbad
13-Jun-2019 14:05:20 Step 10/11 : ONBUILD ADD . /home/clowder/
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 20c6e784c0bf
13-Jun-2019 14:05:20 Step 11/11 : CMD python -c "from simple_extractor import SimplePythonExtractor; from ${EXTRACTION_MODULE} import *; SimplePythonExtractor(${EXTRACTION_FUNC}).start()"
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> ed1a2b5426ba
13-Jun-2019 14:05:20 Successfully built ed1a2b5426ba
13-Jun-2019 14:05:20 Successfully tagged clowder/extractors-simple-extractor-python3:onbuild
13-Jun-2019 14:05:20 Sending build context to Docker daemon  13.31kB
13-Jun-2019 14:05:20
13-Jun-2019 14:05:20 Step 1/11 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:05:20 Step 2/11 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest
13-Jun-2019 14:05:20 ---> 3a385fec96aa
13-Jun-2019 14:05:20 Step 3/11 : ENV R_SCRIPT=""     R_FUNCTION=""
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> cac4024eb215
13-Jun-2019 14:05:20 Step 4/11 : RUN echo "deb http://cran.rstudio.com/bin/linux/ubuntu xenial/" > /etc/apt/sources.list.d/R.list     && apt-key adv --keyserver keyserver.ubuntu.com --recv E084DAB9     && apt-get -q -q update     && apt-get -y install --no-install-recommends r-base-core r-base-dev     && rm -rf /var/lib/apt/lists/*     && Rscript --vanilla -e "install.packages('jsonlite', repos='http://cran.rstudio.com/'); print(system.file(package = 'jsonlite')); q(status=as.integer(system.file(package = 'jsonlite') == ''))"
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 6461ee32cb15
13-Jun-2019 14:05:20 Step 5/11 : COPY r_extractor.py launcher.R /home/clowder/
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> bde468b5efe3
13-Jun-2019 14:05:20 Step 6/11 : ONBUILD COPY packages.* Dockerfile /home/clowder/
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 9c1d955d71a5
13-Jun-2019 14:05:20 Step 7/11 : ONBUILD RUN if [ -e packages.apt ]; then                 apt-get -q -q update                 && xargs apt-get -y install --no-install-recommends < packages.apt                 && rm -rf /var/lib/apt/lists/*;             fi
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> c4471858fc1a
13-Jun-2019 14:05:20 Step 8/11 : ONBUILD COPY docker.R* Dockerfile /home/clowder/
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> ed2f779ed2e5
13-Jun-2019 14:05:20 Step 9/11 : ONBUILD RUN if [ -e docker.R ]; then                 Rscript docker.R;             fi
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 138d9883c002
13-Jun-2019 14:05:20 Step 10/11 : ONBUILD ADD . /home/clowder/
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> e8b8236b7872
13-Jun-2019 14:05:20 Step 11/11 : CMD python r_extractor.py
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 2229a5ffe618
13-Jun-2019 14:05:20 Successfully built 2229a5ffe618
13-Jun-2019 14:05:20 Successfully tagged clowder/extractors-simple-r-extractor-python3:onbuild
13-Jun-2019 14:05:20 Sending build context to Docker daemon  9.216kB
13-Jun-2019 14:05:20
13-Jun-2019 14:05:20 Step 1/3 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:05:20 Step 2/3 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:onbuild
13-Jun-2019 14:05:20 # Executing 5 build triggers
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 370ad528054a
13-Jun-2019 14:05:20 Step 3/3 : ENV MAIN_SCRIPT="wordcount.py"
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 1ab046751304
13-Jun-2019 14:05:20 Successfully built 1ab046751304
13-Jun-2019 14:05:20 Successfully tagged clowder/extractors-wordcount:latest
13-Jun-2019 14:05:20 Sending build context to Docker daemon   5.12kB
13-Jun-2019 14:05:20
13-Jun-2019 14:05:20 Step 1/4 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:05:20 Step 2/4 : FROM clowder/extractors-simple-extractor${PYCLOWDER_PYTHON}:onbuild
13-Jun-2019 14:05:20 # Executing 5 build triggers
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 206b223257b6
13-Jun-2019 14:05:20 Step 3/4 : ENV EXTRACTION_FUNC="wordcount"
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> e502d7d05dca
13-Jun-2019 14:05:20 Step 4/4 : ENV EXTRACTION_MODULE="wordcount"
13-Jun-2019 14:05:20 ---> Using cache
13-Jun-2019 14:05:20 ---> 31e635562be9
13-Jun-2019 14:05:20 Successfully built 31e635562be9
13-Jun-2019 14:05:20 Successfully tagged clowder/extractors-wordcount-simple-extractor:latest
13-Jun-2019 14:05:20 Sending build context to Docker daemon   5.12kB
13-Jun-2019 14:05:20
13-Jun-2019 14:05:21 Step 1/3 : ARG PYCLOWDER_PYTHON=""
13-Jun-2019 14:05:21 Step 2/3 : FROM clowder/extractors-simple-r-extractor${PYCLOWDER_PYTHON}:onbuild
13-Jun-2019 14:05:21 # Executing 5 build triggers
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> 1142415a3b65
13-Jun-2019 14:05:21 Step 3/3 : ENV R_SCRIPT="wordcount.R"     R_FUNCTION="process_file"
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> bdd2d86593fa
13-Jun-2019 14:05:21 Successfully built bdd2d86593fa
13-Jun-2019 14:05:21 Successfully tagged clowder/extractors-wordcount-simple-r-extractor:latest
13-Jun-2019 14:05:21 Sending build context to Docker daemon  8.192kB
13-Jun-2019 14:05:21
13-Jun-2019 14:05:21 Step 1/7 : FROM python:3.5
13-Jun-2019 14:05:21 ---> 6da24b346f6e
13-Jun-2019 14:05:21 Step 2/7 : ENV RABBITMQ_URI="amqp://guest:guest@rabbitmq/%2F"
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> 72a49b95dac2
13-Jun-2019 14:05:21 Step 3/7 : EXPOSE 9999
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> 4f6df31b0a4c
13-Jun-2019 14:05:21 Step 4/7 : RUN pip install pika==0.11.2 requests==2.18.4
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> 6f9384d1c585
13-Jun-2019 14:05:21 Step 5/7 : WORKDIR /src
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> b9a8af134eef
13-Jun-2019 14:05:21 Step 6/7 : COPY monitor.py /src/
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> 13e25baf95cc
13-Jun-2019 14:05:21 Step 7/7 : CMD python monitor.py
13-Jun-2019 14:05:21 ---> Using cache
13-Jun-2019 14:05:21 ---> 6a5f15b08f7f
13-Jun-2019 14:05:21 Successfully built 6a5f15b08f7f
13-Jun-2019 14:05:21 Successfully tagged clowder/extractors-monitor:latest
13-Jun-2019 14:05:21 The push refers to repository [docker.io/clowder/pyclowder]
13-Jun-2019 14:05:21 976f8451f39c: Preparing
13-Jun-2019 14:05:21 98e336da4458: Preparing
13-Jun-2019 14:05:21 5df8c42ccc9f: Preparing
13-Jun-2019 14:05:21 be8d3c44d11d: Preparing
13-Jun-2019 14:05:21 858e75a48de2: Preparing
13-Jun-2019 14:05:21 9efaf2850c0a: Preparing
13-Jun-2019 14:05:21 4c54072a5034: Preparing
13-Jun-2019 14:05:21 49652298c779: Preparing
13-Jun-2019 14:05:21 e15278fcccca: Preparing
13-Jun-2019 14:05:21 739482a9723d: Preparing
13-Jun-2019 14:05:21 9efaf2850c0a: Waiting
13-Jun-2019 14:05:21 4c54072a5034: Waiting
13-Jun-2019 14:05:21 e15278fcccca: Waiting
13-Jun-2019 14:05:21 49652298c779: Waiting
13-Jun-2019 14:05:21 739482a9723d: Waiting
13-Jun-2019 14:05:23 858e75a48de2: Pushed
13-Jun-2019 14:05:23 976f8451f39c: Pushed
13-Jun-2019 14:05:23 4c54072a5034: Layer already exists
13-Jun-2019 14:05:23 98e336da4458: Pushed
13-Jun-2019 14:05:23 5df8c42ccc9f: Pushed
13-Jun-2019 14:05:23 49652298c779: Layer already exists
13-Jun-2019 14:05:23 e15278fcccca: Layer already exists
13-Jun-2019 14:05:24 739482a9723d: Layer already exists
13-Jun-2019 14:05:27 be8d3c44d11d: Pushed
13-Jun-2019 14:05:32 9efaf2850c0a: Pushed
13-Jun-2019 14:05:34 develop: digest: sha256:997d8f6d41d6f6af8de327f14a69a856415ce995c94663146fad6c0ce88ad5cf size: 2404
13-Jun-2019 14:05:34 The push refers to repository [docker.io/clowder/pyclowder-python3]
13-Jun-2019 14:05:34 8eaf3d4d6881: Preparing
13-Jun-2019 14:05:34 5cab86b0ca5d: Preparing
13-Jun-2019 14:05:34 504d3b927684: Preparing
13-Jun-2019 14:05:34 aa66c67409bf: Preparing
13-Jun-2019 14:05:34 31d1c4455974: Preparing
13-Jun-2019 14:05:34 50f6b8a8ebfe: Preparing
13-Jun-2019 14:05:34 4c54072a5034: Preparing
13-Jun-2019 14:05:34 49652298c779: Preparing
13-Jun-2019 14:05:34 e15278fcccca: Preparing
13-Jun-2019 14:05:34 739482a9723d: Preparing
13-Jun-2019 14:05:34 4c54072a5034: Waiting
13-Jun-2019 14:05:34 e15278fcccca: Waiting
13-Jun-2019 14:05:34 739482a9723d: Waiting
13-Jun-2019 14:05:34 49652298c779: Waiting
13-Jun-2019 14:05:36 5cab86b0ca5d: Pushed
13-Jun-2019 14:05:36 aa66c67409bf: Pushed
13-Jun-2019 14:05:36 31d1c4455974: Pushed
13-Jun-2019 14:05:36 4c54072a5034: Layer already exists
13-Jun-2019 14:05:36 49652298c779: Layer already exists
13-Jun-2019 14:05:36 e15278fcccca: Layer already exists
13-Jun-2019 14:05:36 8eaf3d4d6881: Pushed
13-Jun-2019 14:05:36 739482a9723d: Layer already exists
13-Jun-2019 14:05:36 504d3b927684: Pushed
13-Jun-2019 14:05:42 50f6b8a8ebfe: Pushed
13-Jun-2019 14:05:44 develop: digest: sha256:2dacb8f789c38589c42f6119fd7602bcf8c99fc245d66e0f81cb2c26975b2370 size: 2404
13-Jun-2019 14:05:44 The push refers to repository [docker.io/clowder/extractors-monitor]
13-Jun-2019 14:05:44 c13b6a8b7847: Preparing
13-Jun-2019 14:05:44 6ee7fe98137d: Preparing
13-Jun-2019 14:05:44 e8384d1173b7: Preparing
13-Jun-2019 14:05:44 db653af639be: Preparing
13-Jun-2019 14:05:44 30d08197df99: Preparing
13-Jun-2019 14:05:44 3464cba08794: Preparing
13-Jun-2019 14:05:44 24747797d2fa: Preparing
13-Jun-2019 14:05:44 a637c551a0da: Preparing
13-Jun-2019 14:05:44 2c8d31157b81: Preparing
13-Jun-2019 14:05:44 7b76d801397d: Preparing
13-Jun-2019 14:05:44 f32868cde90b: Preparing
13-Jun-2019 14:05:44 0db06dff9d9a: Preparing
13-Jun-2019 14:05:44 24747797d2fa: Waiting
13-Jun-2019 14:05:44 a637c551a0da: Waiting
13-Jun-2019 14:05:44 2c8d31157b81: Waiting
13-Jun-2019 14:05:44 7b76d801397d: Waiting
13-Jun-2019 14:05:44 f32868cde90b: Waiting
13-Jun-2019 14:05:44 0db06dff9d9a: Waiting
13-Jun-2019 14:05:44 3464cba08794: Waiting
13-Jun-2019 14:05:45 db653af639be: Mounted from library/python
13-Jun-2019 14:05:45 30d08197df99: Mounted from library/python
13-Jun-2019 14:05:46 3464cba08794: Mounted from library/python
13-Jun-2019 14:05:46 6ee7fe98137d: Pushed
13-Jun-2019 14:05:46 c13b6a8b7847: Pushed
13-Jun-2019 14:05:46 24747797d2fa: Mounted from library/python
13-Jun-2019 14:05:47 a637c551a0da: Mounted from clowder/mongo-init
13-Jun-2019 14:05:47 7b76d801397d: Mounted from clowder/mongo-init
13-Jun-2019 14:05:47 2c8d31157b81: Mounted from clowder/mongo-init
13-Jun-2019 14:05:47 e8384d1173b7: Pushed
13-Jun-2019 14:05:47 f32868cde90b: Mounted from clowder/mongo-init
13-Jun-2019 14:05:48 0db06dff9d9a: Mounted from clowder/mongo-init
13-Jun-2019 14:05:49 develop: digest: sha256:e690355170ee6db64f5b947ab78205b01118b086599a0f4736d96db15ff5841b size: 2843
13-Jun-2019 14:05:50 The push refers to repository [docker.io/clowder/extractors-wordcount]
13-Jun-2019 14:05:50 c49d063a65cc: Preparing
13-Jun-2019 14:05:50 88a3b30a2b7d: Preparing
13-Jun-2019 14:05:50 bcc8b2b9b8cc: Preparing
13-Jun-2019 14:05:50 8eaf3d4d6881: Preparing
13-Jun-2019 14:05:50 5cab86b0ca5d: Preparing
13-Jun-2019 14:05:50 504d3b927684: Preparing
13-Jun-2019 14:05:50 aa66c67409bf: Preparing
13-Jun-2019 14:05:50 31d1c4455974: Preparing
13-Jun-2019 14:05:50 50f6b8a8ebfe: Preparing
13-Jun-2019 14:05:50 4c54072a5034: Preparing
13-Jun-2019 14:05:50 49652298c779: Preparing
13-Jun-2019 14:05:50 e15278fcccca: Preparing
13-Jun-2019 14:05:50 739482a9723d: Preparing
13-Jun-2019 14:05:50 aa66c67409bf: Waiting
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13-Jun-2019 14:05:55 develop: digest: sha256:8cfb618649fadce7e16331867be3861e84feaba17bbd52bd08891c74df330624 size: 3026
13-Jun-2019 14:05:55 The push refers to repository [docker.io/clowder/pyclowder]
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13-Jun-2019 14:05:58 The push refers to repository [docker.io/clowder/pyclowder]
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13-Jun-2019 14:06:00 The push refers to repository [docker.io/clowder/extractors-binary-preview]
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13-Jun-2019 14:06:01 976f8451f39c: Mounted from clowder/pyclowder
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13-Jun-2019 14:06:05 The push refers to repository [docker.io/clowder/extractors-binary-preview]
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13-Jun-2019 14:06:06 The push refers to repository [docker.io/clowder/extractors-simple-extractor]
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13-Jun-2019 14:06:08 be8d3c44d11d: Mounted from clowder/extractors-binary-preview
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13-Jun-2019 14:06:11 develop-onbuild: digest: sha256:33b3eb9cf8c9c3c876bdfd8d7d3a6e3e22944b842359c5639de95b2ed69adcc6 size: 2611
13-Jun-2019 14:06:12 The push refers to repository [docker.io/clowder/extractors-simple-extractor]
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13-Jun-2019 14:06:13 The push refers to repository [docker.io/clowder/extractors-simple-r-extractor]
13-Jun-2019 14:06:13 d9d522c49dd5: Preparing
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13-Jun-2019 14:06:14 98e336da4458: Mounted from clowder/extractors-simple-extractor
13-Jun-2019 14:06:14 5df8c42ccc9f: Mounted from clowder/extractors-simple-extractor
13-Jun-2019 14:06:15 976f8451f39c: Mounted from clowder/extractors-simple-extractor
13-Jun-2019 14:06:15 be8d3c44d11d: Mounted from clowder/extractors-simple-extractor
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13-Jun-2019 14:06:46 The push refers to repository [docker.io/clowder/extractors-simple-r-extractor]
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13-Jun-2019 14:06:48 Finished task 'docker push' with result: Success
13-Jun-2019 14:06:48 Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit'
13-Jun-2019 14:06:48 Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC265-JOB1...
13-Jun-2019 14:06:48 Finished task 'test results' with result: Success
13-Jun-2019 14:06:48 Running post build plugin 'Docker Container Cleanup'
13-Jun-2019 14:06:48 Running post build plugin 'NCover Results Collector'
13-Jun-2019 14:06:48 Running post build plugin 'Clover Results Collector'
13-Jun-2019 14:06:48 Running post build plugin 'npm Cache Cleanup'
13-Jun-2019 14:06:48 Running post build plugin 'Artifact Copier'
13-Jun-2019 14:06:48 Finalising the build...
13-Jun-2019 14:06:48 Stopping timer.
13-Jun-2019 14:06:48 Build CATS-PYC265-JOB1-26 completed.
13-Jun-2019 14:06:48 Running on server: post build plugin 'NCover Results Collector'
13-Jun-2019 14:06:48 Running on server: post build plugin 'Build Hanging Detection Configuration'
13-Jun-2019 14:06:48 Running on server: post build plugin 'Clover Delta Calculator'
13-Jun-2019 14:06:48 Running on server: post build plugin 'Maven Dependencies Postprocessor'
13-Jun-2019 14:06:48 All post build plugins have finished
13-Jun-2019 14:06:48 Generating build results summary...
13-Jun-2019 14:06:48 Saving build results to disk...
13-Jun-2019 14:06:48 Logging substituted variables...
13-Jun-2019 14:06:48 Indexing build results...
13-Jun-2019 14:06:48 Finished building CATS-PYC265-JOB1-26.