Next Generation of pyClowder
Build: #28 was successful
Job: Default Job was successful
Build log
The build generated 4,190 lines of output. The output is too long and has been truncated to the last 1,000 lines. Download or view full build log.
| 30-Oct-2019 12:23:59 | Setting up libasprintf0v5:amd64 (0.19.7-2ubuntu3.1) ... |
| 30-Oct-2019 12:24:00 | Setting up gettext-base (0.19.7-2ubuntu3.1) ... |
| 30-Oct-2019 12:24:00 | Setting up libicu55:amd64 (55.1-7ubuntu0.4) ... |
| 30-Oct-2019 12:24:01 | Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ... |
| 30-Oct-2019 12:24:01 | Setting up libxmuu1:amd64 (2:1.1.2-2) ... |
| 30-Oct-2019 12:24:01 | Setting up xauth (1:1.0.9-1ubuntu2) ... |
| 30-Oct-2019 12:24:01 | Setting up m4 (1.4.17-5) ... |
| 30-Oct-2019 12:24:01 | Setting up autoconf (2.69-9) ... |
| 30-Oct-2019 12:24:02 | Setting up autotools-dev (20150820.1) ... |
| 30-Oct-2019 12:24:02 | Setting up automake (1:1.15-4ubuntu1) ... |
| 30-Oct-2019 12:24:02 | update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode |
| 30-Oct-2019 12:24:02 | Setting up binutils (2.26.1-1ubuntu1~16.04.8) ... |
| 30-Oct-2019 12:24:02 | Setting up libc-dev-bin (2.23-0ubuntu11) ... |
| 30-Oct-2019 12:24:02 | Setting up linux-libc-dev:amd64 (4.4.0-166.195) ... |
| 30-Oct-2019 12:24:02 | Setting up libc6-dev:amd64 (2.23-0ubuntu11) ... |
| 30-Oct-2019 12:24:02 | Setting up libisl15:amd64 (0.16.1-1) ... |
| 30-Oct-2019 12:24:03 | Setting up cpp-5 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:03 | Setting up cpp (4:5.3.1-1ubuntu1) ... |
| 30-Oct-2019 12:24:03 | Setting up libcc1-0:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:03 | Setting up libgomp1:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:04 | Setting up libitm1:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:04 | Setting up libatomic1:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:04 | Setting up libasan2:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:05 | Setting up liblsan0:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:05 | Setting up libtsan0:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:05 | Setting up libubsan0:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:05 | Setting up libcilkrts5:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:05 | Setting up libmpx0:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:05 | Setting up libquadmath0:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:05 | Setting up libgcc-5-dev:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:06 | Setting up gcc-5 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:06 | Setting up gcc (4:5.3.1-1ubuntu1) ... |
| 30-Oct-2019 12:24:06 | Setting up libstdc++-5-dev:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:06 | Setting up g++-5 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:06 | Setting up g++ (4:5.3.1-1ubuntu1) ... |
| 30-Oct-2019 12:24:06 | update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode |
| 30-Oct-2019 12:24:07 | Setting up make (4.1-6) ... |
| 30-Oct-2019 12:24:07 | Setting up libdpkg-perl (1.18.4ubuntu1.6) ... |
| 30-Oct-2019 12:24:07 | Setting up xz-utils (5.1.1alpha+20120614-2ubuntu2) ... |
| 30-Oct-2019 12:24:07 | update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode |
| 30-Oct-2019 12:24:07 | Setting up patch (2.7.5-1ubuntu0.16.04.2) ... |
| 30-Oct-2019 12:24:07 | Setting up dpkg-dev (1.18.4ubuntu1.6) ... |
| 30-Oct-2019 12:24:08 | Setting up build-essential (12.1ubuntu2) ... |
| 30-Oct-2019 12:24:08 | Setting up libcroco3:amd64 (0.6.11-1) ... |
| 30-Oct-2019 12:24:09 | Setting up gettext (0.19.7-2ubuntu3.1) ... |
| 30-Oct-2019 12:24:09 | Setting up intltool-debian (0.35.0+20060710.4) ... |
| 30-Oct-2019 12:24:09 | Setting up po-debconf (1.0.19) ... |
| 30-Oct-2019 12:24:09 | Setting up libarchive-zip-perl (1.56-2ubuntu0.1) ... |
| 30-Oct-2019 12:24:09 | Setting up libfile-stripnondeterminism-perl (0.015-1) ... |
| 30-Oct-2019 12:24:10 | Setting up libtimedate-perl (2.3000-2) ... |
| 30-Oct-2019 12:24:10 | Setting up liburi-perl (1.71-1) ... |
| 30-Oct-2019 12:24:10 | Setting up libencode-locale-perl (1.05-1) ... |
| 30-Oct-2019 12:24:10 | Setting up libhttp-date-perl (6.02-1) ... |
| 30-Oct-2019 12:24:10 | Setting up libfile-listing-perl (6.04-1) ... |
| 30-Oct-2019 12:24:10 | Setting up libhtml-tagset-perl (3.20-2) ... |
| 30-Oct-2019 12:24:11 | Setting up libhtml-parser-perl (3.72-1) ... |
| 30-Oct-2019 12:24:11 | Setting up libhtml-tree-perl (5.03-2) ... |
| 30-Oct-2019 12:24:11 | Setting up libio-html-perl (1.001-1) ... |
| 30-Oct-2019 12:24:11 | Setting up liblwp-mediatypes-perl (6.02-1) ... |
| 30-Oct-2019 12:24:11 | Setting up libhttp-message-perl (6.11-1) ... |
| 30-Oct-2019 12:24:11 | Setting up libhttp-cookies-perl (6.01-1) ... |
| 30-Oct-2019 12:24:11 | Setting up libhttp-negotiate-perl (6.00-2) ... |
| 30-Oct-2019 12:24:12 | Setting up libnet-ssleay-perl (1.72-1build1) ... |
| 30-Oct-2019 12:24:12 | Setting up libio-socket-ssl-perl (2.024-1) ... |
| 30-Oct-2019 12:24:12 | Setting up libnet-http-perl (6.09-1) ... |
| 30-Oct-2019 12:24:12 | Setting up libwww-robotrules-perl (6.01-1) ... |
| 30-Oct-2019 12:24:12 | Setting up python-six (1.10.0-3) ... |
| 30-Oct-2019 12:24:13 | Setting up python-pkg-resources (20.7.0-1) ... |
| 30-Oct-2019 12:24:14 | Setting up python-scour (0.32-1) ... |
| 30-Oct-2019 12:24:15 | Setting up libgfortran3:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:16 | Setting up libgfortran-5-dev:amd64 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:16 | Setting up gfortran-5 (5.4.0-6ubuntu1~16.04.11) ... |
| 30-Oct-2019 12:24:16 | Setting up gfortran (4:5.3.1-1ubuntu1) ... |
| 30-Oct-2019 12:24:16 | update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode |
| 30-Oct-2019 12:24:16 | update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode |
| 30-Oct-2019 12:24:16 | Setting up icu-devtools (55.1-7ubuntu0.4) ... |
| 30-Oct-2019 12:24:16 | Setting up libblas-common (3.6.0-2ubuntu2) ... |
| 30-Oct-2019 12:24:16 | Setting up libblas3 (3.6.0-2ubuntu2) ... |
| 30-Oct-2019 12:24:16 | update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode |
| 30-Oct-2019 12:24:16 | Setting up libblas-dev (3.6.0-2ubuntu2) ... |
| 30-Oct-2019 12:24:17 | update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode |
| 30-Oct-2019 12:24:17 | Setting up libbz2-dev:amd64 (1.0.6-8ubuntu0.2) ... |
| 30-Oct-2019 12:24:17 | Setting up libpixman-1-0:amd64 (0.33.6-1) ... |
| 30-Oct-2019 12:24:17 | Setting up libxcb-render0:amd64 (1.11.1-1ubuntu1) ... |
| 30-Oct-2019 12:24:17 | Setting up libxcb-shm0:amd64 (1.11.1-1ubuntu1) ... |
| 30-Oct-2019 12:24:18 | Setting up libcairo2:amd64 (1.14.6-1) ... |
| 30-Oct-2019 12:24:18 | Setting up libcurl3:amd64 (7.47.0-1ubuntu2.14) ... |
| 30-Oct-2019 12:24:18 | Setting up libdatrie1:amd64 (0.2.10-2) ... |
| 30-Oct-2019 12:24:18 | Setting up libgraphite2-3:amd64 (1.3.10-0ubuntu0.16.04.1) ... |
| 30-Oct-2019 12:24:19 | Setting up libharfbuzz0b:amd64 (1.0.1-1ubuntu0.1) ... |
| 30-Oct-2019 12:24:19 | Setting up libicu-dev:amd64 (55.1-7ubuntu0.4) ... |
| 30-Oct-2019 12:24:19 | Setting up libjpeg-turbo8-dev:amd64 (1.4.2-0ubuntu3.1) ... |
| 30-Oct-2019 12:24:19 | Setting up libjpeg8:amd64 (8c-2ubuntu8) ... |
| 30-Oct-2019 12:24:19 | Setting up libjpeg8-dev:amd64 (8c-2ubuntu8) ... |
| 30-Oct-2019 12:24:19 | Setting up libjpeg-dev:amd64 (8c-2ubuntu8) ... |
| 30-Oct-2019 12:24:19 | Setting up liblapack3 (3.6.0-2ubuntu2) ... |
| 30-Oct-2019 12:24:19 | update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode |
| 30-Oct-2019 12:24:20 | Setting up liblapack-dev (3.6.0-2ubuntu2) ... |
| 30-Oct-2019 12:24:20 | update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode |
| 30-Oct-2019 12:24:20 | Setting up libtinfo-dev:amd64 (6.0+20160213-1ubuntu1) ... |
| 30-Oct-2019 12:24:20 | Setting up libncurses5-dev:amd64 (6.0+20160213-1ubuntu1) ... |
| 30-Oct-2019 12:24:20 | Setting up libthai-data (0.1.24-2) ... |
| 30-Oct-2019 12:24:20 | Setting up libthai0:amd64 (0.1.24-2) ... |
| 30-Oct-2019 12:24:21 | Setting up libpango-1.0-0:amd64 (1.38.1-1) ... |
| 30-Oct-2019 12:24:21 | Setting up libpangoft2-1.0-0:amd64 (1.38.1-1) ... |
| 30-Oct-2019 12:24:21 | Setting up libpangocairo-1.0-0:amd64 (1.38.1-1) ... |
| 30-Oct-2019 12:24:21 | Setting up libpaper1:amd64 (1.1.24+nmu4ubuntu1) ... |
| 30-Oct-2019 12:24:22 | debconf: unable to initialize frontend: Dialog |
| 30-Oct-2019 12:24:22 | debconf: (TERM is not set, so the dialog frontend is not usable.) |
| 30-Oct-2019 12:24:22 | debconf: falling back to frontend: Readline |
| 30-Oct-2019 12:24:22 | |
| 30-Oct-2019 12:24:22 | Creating config file /etc/papersize with new version |
| 30-Oct-2019 12:24:22 | Setting up libpaper-utils (1.1.24+nmu4ubuntu1) ... |
| 30-Oct-2019 12:24:22 | Setting up libpcre16-3:amd64 (2:8.38-3.1) ... |
| 30-Oct-2019 12:24:22 | Setting up libpcre32-3:amd64 (2:8.38-3.1) ... |
| 30-Oct-2019 12:24:23 | Setting up libpcre3-dev:amd64 (2:8.38-3.1) ... |
| 30-Oct-2019 12:24:23 | Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-2ubuntu4.1) ... |
| 30-Oct-2019 12:24:23 | Setting up libpng12-dev:amd64 (1.2.54-1ubuntu1.1) ... |
| 30-Oct-2019 12:24:23 | Setting up libreadline6-dev:amd64 (6.3-8ubuntu2) ... |
| 30-Oct-2019 12:24:23 | Setting up libreadline-dev:amd64 (6.3-8ubuntu2) ... |
| 30-Oct-2019 12:24:23 | Setting up libtcl8.6:amd64 (8.6.5+dfsg-2) ... |
| 30-Oct-2019 12:24:23 | Setting up libtiff5:amd64 (4.0.6-1ubuntu0.7) ... |
| 30-Oct-2019 12:24:24 | Setting up libtk8.6:amd64 (8.6.5-1) ... |
| 30-Oct-2019 12:24:24 | Setting up libxt6:amd64 (1:1.1.5-0ubuntu1) ... |
| 30-Oct-2019 12:24:24 | Setting up pkg-config (0.29.1-0ubuntu1) ... |
| 30-Oct-2019 12:24:24 | Setting up zip (3.0-11) ... |
| 30-Oct-2019 12:24:24 | Setting up unzip (6.0-20ubuntu1) ... |
| 30-Oct-2019 12:24:24 | Setting up xdg-utils (1.1.1-1ubuntu1.16.04.3) ... |
| 30-Oct-2019 12:24:25 | Setting up r-base-core (3.4.4-1xenial0) ... |
| 30-Oct-2019 12:24:25 | debconf: unable to initialize frontend: Dialog |
| 30-Oct-2019 12:24:25 | debconf: (TERM is not set, so the dialog frontend is not usable.) |
| 30-Oct-2019 12:24:25 | debconf: falling back to frontend: Readline |
| 30-Oct-2019 12:24:25 | |
| 30-Oct-2019 12:24:25 | Creating config file /etc/R/Renviron with new version |
| 30-Oct-2019 12:24:25 | Setting up liblzma-dev:amd64 (5.1.1alpha+20120614-2ubuntu2) ... |
| 30-Oct-2019 12:24:25 | Setting up debhelper (9.20160115ubuntu3) ... |
| 30-Oct-2019 12:24:25 | Setting up libwww-perl (6.15-1) ... |
| 30-Oct-2019 12:24:26 | Setting up libxml-parser-perl (2.44-1build1) ... |
| 30-Oct-2019 12:24:26 | Setting up intltool (0.51.0-2ubuntu1.16.04.1) ... |
| 30-Oct-2019 12:24:26 | Setting up dh-translations (129) ... |
| 30-Oct-2019 12:24:26 | Setting up cdbs (0.4.130ubuntu2) ... |
| 30-Oct-2019 12:24:27 | Setting up r-base-dev (3.4.4-1xenial0) ... |
| 30-Oct-2019 12:24:27 | Setting up dh-strip-nondeterminism (0.015-1) ... |
| 30-Oct-2019 12:24:27 | Setting up liblwp-protocol-https-perl (6.06-2) ... |
| 30-Oct-2019 12:24:28 | Processing triggers for libc-bin (2.23-0ubuntu11) ... |
| 30-Oct-2019 12:24:28 | Processing triggers for systemd (229-4ubuntu21.22) ... |
| 30-Oct-2019 12:24:28 | Processing triggers for ca-certificates (20170717~16.04.2) ... |
| 30-Oct-2019 12:24:28 | Updating certificates in /etc/ssl/certs... |
| 30-Oct-2019 12:24:30 | 148 added, 0 removed; done. |
| 30-Oct-2019 12:24:30 | Running hooks in /etc/ca-certificates/update.d... |
| 30-Oct-2019 12:24:30 | done. |
| 30-Oct-2019 12:24:30 | Installing package into '/usr/local/lib/R/site-library' |
| 30-Oct-2019 12:24:30 | (as 'lib' is unspecified) |
| 30-Oct-2019 12:24:31 | trying URL 'http://cran.rstudio.com/src/contrib/jsonlite_1.6.tar.gz' |
| 30-Oct-2019 12:24:31 | Content type 'application/x-gzip' length 1052728 bytes (1.0 MB) |
| 30-Oct-2019 12:24:31 | ================================================== |
| 30-Oct-2019 12:24:31 | downloaded 1.0 MB |
| 30-Oct-2019 12:24:31 | |
| 30-Oct-2019 12:24:32 | * installing *source* package 'jsonlite' ... |
| 30-Oct-2019 12:24:32 | ** package 'jsonlite' successfully unpacked and MD5 sums checked |
| 30-Oct-2019 12:24:32 | ** libs |
| 30-Oct-2019 12:24:32 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c base64.c -o base64.o |
| 30-Oct-2019 12:24:32 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c collapse_array.c -o collapse_array.o |
| 30-Oct-2019 12:24:32 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c collapse_object.c -o collapse_object.o |
| 30-Oct-2019 12:24:32 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c collapse_pretty.c -o collapse_pretty.o |
| 30-Oct-2019 12:24:32 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c escape_chars.c -o escape_chars.o |
| 30-Oct-2019 12:24:32 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c integer64_to_na.c -o integer64_to_na.o |
| 30-Oct-2019 12:24:32 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c is_datelist.c -o is_datelist.o |
| 30-Oct-2019 12:24:32 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c is_recordlist.c -o is_recordlist.o |
| 30-Oct-2019 12:24:32 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c is_scalarlist.c -o is_scalarlist.o |
| 30-Oct-2019 12:24:32 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c modp_numtoa.c -o modp_numtoa.o |
| 30-Oct-2019 12:24:32 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c null_to_na.c -o null_to_na.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c num_to_char.c -o num_to_char.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c parse.c -o parse.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c prettify.c -o prettify.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c push_parser.c -o push_parser.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c r-base64.c -o r-base64.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c register.c -o register.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c row_collapse.c -o row_collapse.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c transpose_list.c -o transpose_list.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c validate.c -o validate.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl.c -o yajl/yajl.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_buf.c -o yajl/yajl_buf.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_encode.c -o yajl/yajl_encode.o |
| 30-Oct-2019 12:24:33 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_gen.c -o yajl/yajl_gen.o |
| 30-Oct-2019 12:24:34 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_lex.c -o yajl/yajl_lex.o |
| 30-Oct-2019 12:24:34 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_parser.c -o yajl/yajl_parser.o |
| 30-Oct-2019 12:24:34 | gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_tree.c -o yajl/yajl_tree.o |
| 30-Oct-2019 12:24:34 | ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o |
| 30-Oct-2019 12:24:34 | g++ -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/usr/lib/R/lib -lR |
| 30-Oct-2019 12:24:34 | installing to /usr/local/lib/R/site-library/jsonlite/libs |
| 30-Oct-2019 12:24:34 | ** R |
| 30-Oct-2019 12:24:34 | ** inst |
| 30-Oct-2019 12:24:34 | ** preparing package for lazy loading |
| 30-Oct-2019 12:24:34 | ** help |
| 30-Oct-2019 12:24:34 | *** installing help indices |
| 30-Oct-2019 12:24:34 | ** building package indices |
| 30-Oct-2019 12:24:34 | ** installing vignettes |
| 30-Oct-2019 12:24:34 | ** testing if installed package can be loaded |
| 30-Oct-2019 12:24:34 | * DONE (jsonlite) |
| 30-Oct-2019 12:24:34 | |
| 30-Oct-2019 12:24:34 | The downloaded source packages are in |
| 30-Oct-2019 12:24:34 | '/tmp/Rtmpa1vhmT/downloaded_packages' |
| 30-Oct-2019 12:24:34 | [1] "/usr/local/lib/R/site-library/jsonlite" |
| 30-Oct-2019 12:24:42 | Removing intermediate container bf2865a6d863 |
| 30-Oct-2019 12:24:42 | ---> 987165e71546 |
| 30-Oct-2019 12:24:42 | Step 5/11 : COPY r_extractor.py launcher.R /home/clowder/ |
| 30-Oct-2019 12:24:42 | ---> b9d788545873 |
| 30-Oct-2019 12:24:42 | Step 6/11 : ONBUILD COPY packages.* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:24:43 | ---> Running in 8b976c182014 |
| 30-Oct-2019 12:24:43 | Removing intermediate container 8b976c182014 |
| 30-Oct-2019 12:24:43 | ---> b724c6d97d72 |
| 30-Oct-2019 12:24:43 | Step 7/11 : ONBUILD RUN if [ -e packages.apt ]; then apt-get -q -q update && xargs apt-get -y install --no-install-recommends < packages.apt && rm -rf /var/lib/apt/lists/*; fi |
| 30-Oct-2019 12:24:43 | ---> Running in 627aa453157d |
| 30-Oct-2019 12:24:43 | Removing intermediate container 627aa453157d |
| 30-Oct-2019 12:24:43 | ---> 060757809f46 |
| 30-Oct-2019 12:24:43 | Step 8/11 : ONBUILD COPY docker.R* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:24:44 | ---> Running in 293e42578132 |
| 30-Oct-2019 12:24:44 | Removing intermediate container 293e42578132 |
| 30-Oct-2019 12:24:44 | ---> 2727c5f92f37 |
| 30-Oct-2019 12:24:44 | Step 9/11 : ONBUILD RUN if [ -e docker.R ]; then Rscript docker.R; fi |
| 30-Oct-2019 12:24:44 | ---> Running in 3f89bab01c29 |
| 30-Oct-2019 12:24:45 | Removing intermediate container 3f89bab01c29 |
| 30-Oct-2019 12:24:45 | ---> 3a5f1d877459 |
| 30-Oct-2019 12:24:45 | Step 10/11 : ONBUILD ADD . /home/clowder/ |
| 30-Oct-2019 12:24:45 | ---> Running in e1fb0cfffcb5 |
| 30-Oct-2019 12:24:46 | Removing intermediate container e1fb0cfffcb5 |
| 30-Oct-2019 12:24:46 | ---> c0f7a571223b |
| 30-Oct-2019 12:24:46 | Step 11/11 : CMD python r_extractor.py |
| 30-Oct-2019 12:24:46 | ---> Running in 2044b6f5eedf |
| 30-Oct-2019 12:24:47 | Removing intermediate container 2044b6f5eedf |
| 30-Oct-2019 12:24:47 | ---> d84fdb8cf328 |
| 30-Oct-2019 12:24:47 | Successfully built d84fdb8cf328 |
| 30-Oct-2019 12:24:47 | Successfully tagged clowder/extractors-simple-r-extractor-python3:onbuild |
| 30-Oct-2019 12:24:47 | Sending build context to Docker daemon 9.216kB |
| 30-Oct-2019 12:24:47 | |
| 30-Oct-2019 12:24:47 | Step 1/3 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:24:47 | Step 2/3 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:onbuild |
| 30-Oct-2019 12:24:47 | # Executing 5 build triggers |
| 30-Oct-2019 12:24:48 | ---> Running in 4d82afa3b296 |
| 30-Oct-2019 12:24:50 | Removing intermediate container 4d82afa3b296 |
| 30-Oct-2019 12:24:51 | ---> Running in 94663ec19d94 |
| 30-Oct-2019 12:24:53 | Removing intermediate container 94663ec19d94 |
| 30-Oct-2019 12:24:53 | ---> 399e7fda9f70 |
| 30-Oct-2019 12:24:53 | Step 3/3 : ENV MAIN_SCRIPT="wordcount.py" |
| 30-Oct-2019 12:24:53 | ---> Running in c51448ea450b |
| 30-Oct-2019 12:24:54 | Removing intermediate container c51448ea450b |
| 30-Oct-2019 12:24:54 | ---> 4a6da7ff6e09 |
| 30-Oct-2019 12:24:54 | Successfully built 4a6da7ff6e09 |
| 30-Oct-2019 12:24:54 | Successfully tagged clowder/extractors-wordcount:latest |
| 30-Oct-2019 12:24:54 | Sending build context to Docker daemon 5.12kB |
| 30-Oct-2019 12:24:54 | |
| 30-Oct-2019 12:24:54 | Step 1/4 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:24:54 | Step 2/4 : FROM clowder/extractors-simple-extractor${PYCLOWDER_PYTHON}:onbuild |
| 30-Oct-2019 12:24:54 | # Executing 5 build triggers |
| 30-Oct-2019 12:24:55 | ---> Running in 5ef093e23808 |
| 30-Oct-2019 12:24:57 | Removing intermediate container 5ef093e23808 |
| 30-Oct-2019 12:24:57 | ---> Running in 2b68fb26c736 |
| 30-Oct-2019 12:24:59 | Removing intermediate container 2b68fb26c736 |
| 30-Oct-2019 12:25:00 | ---> 9d950e820a31 |
| 30-Oct-2019 12:25:00 | Step 3/4 : ENV EXTRACTION_FUNC="wordcount" |
| 30-Oct-2019 12:25:00 | ---> Running in 787be5443fdc |
| 30-Oct-2019 12:25:00 | Removing intermediate container 787be5443fdc |
| 30-Oct-2019 12:25:00 | ---> 8e76e35ccb9f |
| 30-Oct-2019 12:25:00 | Step 4/4 : ENV EXTRACTION_MODULE="wordcount" |
| 30-Oct-2019 12:25:00 | ---> Running in 2c460d01c9e1 |
| 30-Oct-2019 12:25:01 | Removing intermediate container 2c460d01c9e1 |
| 30-Oct-2019 12:25:01 | ---> fe651e359811 |
| 30-Oct-2019 12:25:01 | Successfully built fe651e359811 |
| 30-Oct-2019 12:25:01 | Successfully tagged clowder/extractors-wordcount-simple-extractor:latest |
| 30-Oct-2019 12:25:01 | Sending build context to Docker daemon 5.12kB |
| 30-Oct-2019 12:25:01 | |
| 30-Oct-2019 12:25:01 | Step 1/3 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:01 | Step 2/3 : FROM clowder/extractors-simple-r-extractor${PYCLOWDER_PYTHON}:onbuild |
| 30-Oct-2019 12:25:01 | # Executing 5 build triggers |
| 30-Oct-2019 12:25:02 | ---> Running in c5be4456b0c6 |
| 30-Oct-2019 12:25:04 | Removing intermediate container c5be4456b0c6 |
| 30-Oct-2019 12:25:04 | ---> Running in 61ab3c7af233 |
| 30-Oct-2019 12:25:06 | Removing intermediate container 61ab3c7af233 |
| 30-Oct-2019 12:25:07 | ---> 54a8098649b3 |
| 30-Oct-2019 12:25:07 | Step 3/3 : ENV R_SCRIPT="wordcount.R" R_FUNCTION="process_file" |
| 30-Oct-2019 12:25:07 | ---> Running in 7495fd721505 |
| 30-Oct-2019 12:25:07 | Removing intermediate container 7495fd721505 |
| 30-Oct-2019 12:25:07 | ---> 59778e9ffc5e |
| 30-Oct-2019 12:25:07 | Successfully built 59778e9ffc5e |
| 30-Oct-2019 12:25:07 | Successfully tagged clowder/extractors-wordcount-simple-r-extractor:latest |
| 30-Oct-2019 12:25:07 | Finished task 'docker build' with result: Success |
| 30-Oct-2019 12:25:07 | Starting task 'docker push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' |
| 30-Oct-2019 12:25:07 | Beginning to execute external process for build 'Clowder - pyclowder2 - develop - Default Job #28 (CATS-PYC265-JOB1-28)' ... running command line: /bin/sh release.sh ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC265-JOB1 ... using extra environment variables: bamboo_planRepository_1_branch=develop bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node bamboo_capability_system_builder_command_buckminster_4_4=/home/bamboo/buckminster-4.4/buckminster bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster bamboo_planRepository_1_branchDisplayName=develop bamboo_repository_revision_number=95d80d10f8fea687b4678edc01976663569b6fa4 bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC265-JOB1-28 bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build bamboo_repository_157745161_name=pyclowder2 bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC265-JOB1 bamboo_planRepository_1_name=pyclowder2 bamboo_buildKey=CATS-PYC265-JOB1 bamboo_capability_system_os=linux bamboo_shortPlanName=pyclowder2 bamboo_repository_157745161_branch_name=develop bamboo_planRepository_name=pyclowder2 bamboo_buildNumber=28 bamboo_capability_system_builder_node_grunt_6=/home/bamboo/node-v6.9.1/bin/grunt bamboo_shortJobName=Default Job bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC265-JOB1-28 bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_agentId=140673028 bamboo_planName=Clowder - pyclowder2 - develop bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_6=/home/bamboo/bamboo-agent-home/temp/CATS-PYC265-JOB1-28-ScriptBuildTask-7089630740964520160.sh bamboo_shortPlanKey=PYC265 bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt bamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node bamboo_shortJobKey=JOB1 bamboo_planRepository_revision=95d80d10f8fea687b4678edc01976663569b6fa4 bamboo_buildTimeStamp=2019-10-30T12:09:39.033-05:00 bamboo_repository_previous_revision_number=727b1d7f7657d2cc231ec2a623577d79454b25ec bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1 bamboo_repository_157745161_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_3=/home/bamboo/bamboo-agent-home/temp/CATS-PYC265-JOB1-28-ScriptBuildTask-2452725431473115952.sh bamboo_planRepository_previousRevision=727b1d7f7657d2cc231ec2a623577d79454b25ec bamboo_repository_157745161_git_username= bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_2=/bin/sh docker.sh bamboo_repository_git_branch=develop bamboo_buildResultKey=CATS-PYC265-JOB1-28 bamboo_repository_branch_name=develop bamboo_buildPlanName=Clowder - pyclowder2 - develop - Default Job bamboo_planRepository_1_revision=95d80d10f8fea687b4678edc01976663569b6fa4 bamboo_capability_system_builder_command_python3=/usr/bin/python3 bamboo_repository_name=pyclowder2 bamboo_buildFailed=false bamboo_repository_157745161_git_branch=develop bamboo_capability_system_docker_executable=/usr/bin/docker bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt bamboo_planRepository_branch=develop bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir bamboo_repository_157745161_previous_revision_number=727b1d7f7657d2cc231ec2a623577d79454b25ec bamboo_capability_system_git_executable=/usr/bin/git bamboo_repository_git_username= bamboo_planRepository_1_previousRevision=727b1d7f7657d2cc231ec2a623577d79454b25ec bamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13 bamboo_planRepository_branchDisplayName=develop bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs bamboo_planRepository_1_type=bbserver bamboo_planRepository_branchName=develop bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7 bamboo_capability_system_hostname=buildserver-1 bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66 bamboo_capability_system_software_mongo=/usr/bin/mongo bamboo_plan_storageTag=plan-157548561 bamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66 bamboo_planRepository_1_username= bamboo_planRepository_type=bbserver bamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node bamboo_repository_157745161_revision_number=95d80d10f8fea687b4678edc01976663569b6fa4 bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4 bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9 bamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC265-JOB1 bamboo_planKey=CATS-PYC265 bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_planRepository_username= bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66 bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41 bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60 bamboo_planRepository_1_branchName=develop |
| 30-Oct-2019 12:25:07 | Sending build context to Docker daemon 275.5kB |
| 30-Oct-2019 12:25:07 | |
| 30-Oct-2019 12:25:07 | Step 1/10 : FROM ubuntu:16.04 |
| 30-Oct-2019 12:25:07 | ---> b9409899fe86 |
| 30-Oct-2019 12:25:07 | Step 2/10 : ARG PYTHON_VERSION="2.7" |
| 30-Oct-2019 12:25:07 | ---> Using cache |
| 30-Oct-2019 12:25:07 | ---> 59ff5a564858 |
| 30-Oct-2019 12:25:07 | Step 3/10 : ENV PYTHON_VERSION=${PYTHON_VERSION} RABBITMQ_URI="amqp://guest:guest@rabbitmq:5672/%2F" RABBITMQ_EXCHANGE="clowder" RABBITMQ_QUEUE="" REGISTRATION_ENDPOINTS="" EMAIL_SERVER="" EMAIL_SENDER="extractor" MAIN_SCRIPT="" |
| 30-Oct-2019 12:25:07 | ---> Using cache |
| 30-Oct-2019 12:25:07 | ---> 4592a46ea115 |
| 30-Oct-2019 12:25:07 | Step 4/10 : RUN apt-get -q -q update && apt-get install -y --no-install-recommends python${PYTHON_VERSION} curl && if [ ! -e /usr/bin/python ]; then ln -s /usr/bin/python${PYTHON_VERSION} /usr/bin/python; fi && curl -k https://bootstrap.pypa.io/get-pip.py -o /tmp/get-pip.py && python /tmp/get-pip.py && pip install --upgrade setuptools && rm -rf /var/lib/apt/lists/* /tmp/get-pip.py |
| 30-Oct-2019 12:25:07 | ---> Using cache |
| 30-Oct-2019 12:25:07 | ---> 2d4c50b1b4af |
| 30-Oct-2019 12:25:07 | Step 5/10 : COPY pyclowder /tmp/pyclowder/pyclowder |
| 30-Oct-2019 12:25:07 | ---> Using cache |
| 30-Oct-2019 12:25:07 | ---> afd216f2aac8 |
| 30-Oct-2019 12:25:07 | Step 6/10 : COPY setup.py description.rst /tmp/pyclowder/ |
| 30-Oct-2019 12:25:07 | ---> Using cache |
| 30-Oct-2019 12:25:07 | ---> a09a7463d008 |
| 30-Oct-2019 12:25:07 | Step 7/10 : RUN pip install --upgrade /tmp/pyclowder && rm -rf /tmp/pyclowder |
| 30-Oct-2019 12:25:07 | ---> Using cache |
| 30-Oct-2019 12:25:07 | ---> f598f3692a65 |
| 30-Oct-2019 12:25:07 | Step 8/10 : WORKDIR /home/clowder |
| 30-Oct-2019 12:25:07 | ---> Using cache |
| 30-Oct-2019 12:25:07 | ---> dea79caebe8e |
| 30-Oct-2019 12:25:07 | Step 9/10 : COPY notifications.json /home/clowder/ |
| 30-Oct-2019 12:25:07 | ---> Using cache |
| 30-Oct-2019 12:25:07 | ---> bd5a58bf48f8 |
| 30-Oct-2019 12:25:07 | Step 10/10 : CMD python "./${MAIN_SCRIPT}" |
| 30-Oct-2019 12:25:07 | ---> Using cache |
| 30-Oct-2019 12:25:07 | ---> 4c1728441ea8 |
| 30-Oct-2019 12:25:07 | Successfully built 4c1728441ea8 |
| 30-Oct-2019 12:25:07 | Successfully tagged clowder/pyclowder:latest |
| 30-Oct-2019 12:25:08 | Sending build context to Docker daemon 273.4kB |
| 30-Oct-2019 12:25:08 | |
| 30-Oct-2019 12:25:08 | Step 1/7 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:08 | Step 2/7 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest |
| 30-Oct-2019 12:25:08 | ---> 4c1728441ea8 |
| 30-Oct-2019 12:25:08 | Step 3/7 : ONBUILD COPY packages.* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 376e5a0bcba4 |
| 30-Oct-2019 12:25:08 | Step 4/7 : ONBUILD RUN if [ -e packages.apt ]; then apt-get -q -q update && xargs apt-get -y install --no-install-recommends < packages.apt && rm -rf /var/lib/apt/lists/*; fi |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 1c6bd32b0164 |
| 30-Oct-2019 12:25:08 | Step 5/7 : ONBUILD COPY requirements.txt* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 601abc9f189b |
| 30-Oct-2019 12:25:08 | Step 6/7 : ONBUILD RUN if [ -e requirements.txt ]; then pip install --no-cache-dir -r requirements.txt; fi |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 38f207cd78cd |
| 30-Oct-2019 12:25:08 | Step 7/7 : ONBUILD ADD . /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 6195f796cc2d |
| 30-Oct-2019 12:25:08 | Successfully built 6195f796cc2d |
| 30-Oct-2019 12:25:08 | Successfully tagged clowder/pyclowder:onbuild |
| 30-Oct-2019 12:25:08 | Sending build context to Docker daemon 12.8kB |
| 30-Oct-2019 12:25:08 | |
| 30-Oct-2019 12:25:08 | Step 1/6 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:08 | Step 2/6 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:onbuild |
| 30-Oct-2019 12:25:08 | # Executing 5 build triggers |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> d698c7277073 |
| 30-Oct-2019 12:25:08 | Step 3/6 : ENV MAIN_SCRIPT="binary_extractor.py" RABBITMQ_QUEUE="" IMAGE_BINARY="" IMAGE_TYPE="" IMAGE_THUMBNAIL_COMMAND="" IMAGE_PREVIEW_COMMAND="" PREVIEW_BINARY="" PREVIEW_TYPE="" PREVIEW_COMMAND="" |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 7cc8cc7a2c4e |
| 30-Oct-2019 12:25:08 | Step 4/6 : ONBUILD COPY packages.* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 6a8576e24f72 |
| 30-Oct-2019 12:25:08 | Step 5/6 : ONBUILD RUN if [ -e packages.apt ]; then apt-get -q -q update && xargs apt-get -y install --no-install-recommends < packages.apt && rm -rf /var/lib/apt/lists/*; fi |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 2f4d00bcb482 |
| 30-Oct-2019 12:25:08 | Step 6/6 : ONBUILD COPY extractor_info.json /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 06d04e5e5bbe |
| 30-Oct-2019 12:25:08 | Successfully built 06d04e5e5bbe |
| 30-Oct-2019 12:25:08 | Successfully tagged clowder/extractors-binary-preview:onbuild |
| 30-Oct-2019 12:25:08 | Sending build context to Docker daemon 6.656kB |
| 30-Oct-2019 12:25:08 | |
| 30-Oct-2019 12:25:08 | Step 1/11 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:08 | Step 2/11 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest |
| 30-Oct-2019 12:25:08 | ---> 4c1728441ea8 |
| 30-Oct-2019 12:25:08 | Step 3/11 : ENV EXTRACTION_FUNC="" |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 4e0e14e5e541 |
| 30-Oct-2019 12:25:08 | Step 4/11 : ENV EXTRACTION_MODULE="" |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> ee75c6360eeb |
| 30-Oct-2019 12:25:08 | Step 5/11 : COPY simple_extractor.py . |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 39fcdf68bd51 |
| 30-Oct-2019 12:25:08 | Step 6/11 : ONBUILD COPY packages.* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> c37d967abb85 |
| 30-Oct-2019 12:25:08 | Step 7/11 : ONBUILD RUN if [ -e packages.apt ]; then apt-get -q -q update && xargs apt-get -y install --no-install-recommends < packages.apt && rm -rf /var/lib/apt/lists/*; fi |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 5bd32153d1b7 |
| 30-Oct-2019 12:25:08 | Step 8/11 : ONBUILD COPY requirements.txt* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> e5eeb8b61484 |
| 30-Oct-2019 12:25:08 | Step 9/11 : ONBUILD RUN if [ -e requirements.txt ]; then pip install --no-cache-dir -r requirements.txt; fi |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> c72e9346d235 |
| 30-Oct-2019 12:25:08 | Step 10/11 : ONBUILD ADD . /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> f08c6fc432e3 |
| 30-Oct-2019 12:25:08 | Step 11/11 : CMD python -c "from simple_extractor import SimplePythonExtractor; from ${EXTRACTION_MODULE} import *; SimplePythonExtractor(${EXTRACTION_FUNC}).start()" |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> c066388cbed6 |
| 30-Oct-2019 12:25:08 | Successfully built c066388cbed6 |
| 30-Oct-2019 12:25:08 | Successfully tagged clowder/extractors-simple-extractor:onbuild |
| 30-Oct-2019 12:25:08 | Sending build context to Docker daemon 13.31kB |
| 30-Oct-2019 12:25:08 | |
| 30-Oct-2019 12:25:08 | Step 1/11 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:08 | Step 2/11 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest |
| 30-Oct-2019 12:25:08 | ---> 4c1728441ea8 |
| 30-Oct-2019 12:25:08 | Step 3/11 : ENV R_SCRIPT="" R_FUNCTION="" |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 1aef98f32f53 |
| 30-Oct-2019 12:25:08 | Step 4/11 : RUN echo "deb http://cran.rstudio.com/bin/linux/ubuntu xenial/" > /etc/apt/sources.list.d/R.list && apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E298A3A825C0D65DFD57CBB651716619E084DAB9 && apt-get -q -q update && apt-get -y install --no-install-recommends r-base-core r-base-dev && rm -rf /var/lib/apt/lists/* && Rscript --vanilla -e "install.packages('jsonlite', repos='http://cran.rstudio.com/'); print(system.file(package = 'jsonlite')); q(status=as.integer(system.file(package = 'jsonlite') == ''))" |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> fd0fa8382e9a |
| 30-Oct-2019 12:25:08 | Step 5/11 : COPY r_extractor.py launcher.R /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 0bba6001388d |
| 30-Oct-2019 12:25:08 | Step 6/11 : ONBUILD COPY packages.* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> dd723e3f4070 |
| 30-Oct-2019 12:25:08 | Step 7/11 : ONBUILD RUN if [ -e packages.apt ]; then apt-get -q -q update && xargs apt-get -y install --no-install-recommends < packages.apt && rm -rf /var/lib/apt/lists/*; fi |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 3986941c93f6 |
| 30-Oct-2019 12:25:08 | Step 8/11 : ONBUILD COPY docker.R* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 7fefb7aac792 |
| 30-Oct-2019 12:25:08 | Step 9/11 : ONBUILD RUN if [ -e docker.R ]; then Rscript docker.R; fi |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 47977ea02e49 |
| 30-Oct-2019 12:25:08 | Step 10/11 : ONBUILD ADD . /home/clowder/ |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> a108e8a941ff |
| 30-Oct-2019 12:25:08 | Step 11/11 : CMD python r_extractor.py |
| 30-Oct-2019 12:25:08 | ---> Using cache |
| 30-Oct-2019 12:25:08 | ---> 941910f8faed |
| 30-Oct-2019 12:25:08 | Successfully built 941910f8faed |
| 30-Oct-2019 12:25:08 | Successfully tagged clowder/extractors-simple-r-extractor:onbuild |
| 30-Oct-2019 12:25:09 | Sending build context to Docker daemon 275.5kB |
| 30-Oct-2019 12:25:09 | |
| 30-Oct-2019 12:25:09 | Step 1/10 : FROM ubuntu:16.04 |
| 30-Oct-2019 12:25:09 | ---> b9409899fe86 |
| 30-Oct-2019 12:25:09 | Step 2/10 : ARG PYTHON_VERSION="2.7" |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 59ff5a564858 |
| 30-Oct-2019 12:25:09 | Step 3/10 : ENV PYTHON_VERSION=${PYTHON_VERSION} RABBITMQ_URI="amqp://guest:guest@rabbitmq:5672/%2F" RABBITMQ_EXCHANGE="clowder" RABBITMQ_QUEUE="" REGISTRATION_ENDPOINTS="" EMAIL_SERVER="" EMAIL_SENDER="extractor" MAIN_SCRIPT="" |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 3d49e35c72d9 |
| 30-Oct-2019 12:25:09 | Step 4/10 : RUN apt-get -q -q update && apt-get install -y --no-install-recommends python${PYTHON_VERSION} curl && if [ ! -e /usr/bin/python ]; then ln -s /usr/bin/python${PYTHON_VERSION} /usr/bin/python; fi && curl -k https://bootstrap.pypa.io/get-pip.py -o /tmp/get-pip.py && python /tmp/get-pip.py && pip install --upgrade setuptools && rm -rf /var/lib/apt/lists/* /tmp/get-pip.py |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 823c089fd6d9 |
| 30-Oct-2019 12:25:09 | Step 5/10 : COPY pyclowder /tmp/pyclowder/pyclowder |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> a76e30316ec7 |
| 30-Oct-2019 12:25:09 | Step 6/10 : COPY setup.py description.rst /tmp/pyclowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 72d7a763232a |
| 30-Oct-2019 12:25:09 | Step 7/10 : RUN pip install --upgrade /tmp/pyclowder && rm -rf /tmp/pyclowder |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> e60fc0280cd5 |
| 30-Oct-2019 12:25:09 | Step 8/10 : WORKDIR /home/clowder |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 5db1c2afde2d |
| 30-Oct-2019 12:25:09 | Step 9/10 : COPY notifications.json /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> cdf1ad32886b |
| 30-Oct-2019 12:25:09 | Step 10/10 : CMD python "./${MAIN_SCRIPT}" |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 58b9afb82e5b |
| 30-Oct-2019 12:25:09 | Successfully built 58b9afb82e5b |
| 30-Oct-2019 12:25:09 | Successfully tagged clowder/pyclowder-python3:latest |
| 30-Oct-2019 12:25:09 | Sending build context to Docker daemon 273.4kB |
| 30-Oct-2019 12:25:09 | |
| 30-Oct-2019 12:25:09 | Step 1/7 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:09 | Step 2/7 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest |
| 30-Oct-2019 12:25:09 | ---> 58b9afb82e5b |
| 30-Oct-2019 12:25:09 | Step 3/7 : ONBUILD COPY packages.* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 7c639e41469b |
| 30-Oct-2019 12:25:09 | Step 4/7 : ONBUILD RUN if [ -e packages.apt ]; then apt-get -q -q update && xargs apt-get -y install --no-install-recommends < packages.apt && rm -rf /var/lib/apt/lists/*; fi |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 706515b7f89e |
| 30-Oct-2019 12:25:09 | Step 5/7 : ONBUILD COPY requirements.txt* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 7adbd216cae5 |
| 30-Oct-2019 12:25:09 | Step 6/7 : ONBUILD RUN if [ -e requirements.txt ]; then pip install --no-cache-dir -r requirements.txt; fi |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 490b79ef88b0 |
| 30-Oct-2019 12:25:09 | Step 7/7 : ONBUILD ADD . /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 1c3816837dca |
| 30-Oct-2019 12:25:09 | Successfully built 1c3816837dca |
| 30-Oct-2019 12:25:09 | Successfully tagged clowder/pyclowder-python3:onbuild |
| 30-Oct-2019 12:25:09 | Sending build context to Docker daemon 12.8kB |
| 30-Oct-2019 12:25:09 | |
| 30-Oct-2019 12:25:09 | Step 1/6 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:09 | Step 2/6 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:onbuild |
| 30-Oct-2019 12:25:09 | # Executing 5 build triggers |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 71405b10a7f4 |
| 30-Oct-2019 12:25:09 | Step 3/6 : ENV MAIN_SCRIPT="binary_extractor.py" RABBITMQ_QUEUE="" IMAGE_BINARY="" IMAGE_TYPE="" IMAGE_THUMBNAIL_COMMAND="" IMAGE_PREVIEW_COMMAND="" PREVIEW_BINARY="" PREVIEW_TYPE="" PREVIEW_COMMAND="" |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 46fcfb0b2a60 |
| 30-Oct-2019 12:25:09 | Step 4/6 : ONBUILD COPY packages.* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> c828f7f70b65 |
| 30-Oct-2019 12:25:09 | Step 5/6 : ONBUILD RUN if [ -e packages.apt ]; then apt-get -q -q update && xargs apt-get -y install --no-install-recommends < packages.apt && rm -rf /var/lib/apt/lists/*; fi |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 2d82dae59fdd |
| 30-Oct-2019 12:25:09 | Step 6/6 : ONBUILD COPY extractor_info.json /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> e02a9368bce9 |
| 30-Oct-2019 12:25:09 | Successfully built e02a9368bce9 |
| 30-Oct-2019 12:25:09 | Successfully tagged clowder/extractors-binary-preview-python3:onbuild |
| 30-Oct-2019 12:25:09 | Sending build context to Docker daemon 6.656kB |
| 30-Oct-2019 12:25:09 | |
| 30-Oct-2019 12:25:09 | Step 1/11 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:09 | Step 2/11 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest |
| 30-Oct-2019 12:25:09 | ---> 58b9afb82e5b |
| 30-Oct-2019 12:25:09 | Step 3/11 : ENV EXTRACTION_FUNC="" |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> ef6b4b9e9654 |
| 30-Oct-2019 12:25:09 | Step 4/11 : ENV EXTRACTION_MODULE="" |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 358fd67c7808 |
| 30-Oct-2019 12:25:09 | Step 5/11 : COPY simple_extractor.py . |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 7212a6ad2724 |
| 30-Oct-2019 12:25:09 | Step 6/11 : ONBUILD COPY packages.* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 95ed6edbf6f2 |
| 30-Oct-2019 12:25:09 | Step 7/11 : ONBUILD RUN if [ -e packages.apt ]; then apt-get -q -q update && xargs apt-get -y install --no-install-recommends < packages.apt && rm -rf /var/lib/apt/lists/*; fi |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> e75fef4dc675 |
| 30-Oct-2019 12:25:09 | Step 8/11 : ONBUILD COPY requirements.txt* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 909f9861a5e0 |
| 30-Oct-2019 12:25:09 | Step 9/11 : ONBUILD RUN if [ -e requirements.txt ]; then pip install --no-cache-dir -r requirements.txt; fi |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> b9a225e4b0fd |
| 30-Oct-2019 12:25:09 | Step 10/11 : ONBUILD ADD . /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 5871b6811e3f |
| 30-Oct-2019 12:25:09 | Step 11/11 : CMD python -c "from simple_extractor import SimplePythonExtractor; from ${EXTRACTION_MODULE} import *; SimplePythonExtractor(${EXTRACTION_FUNC}).start()" |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> c8eae8fb9a13 |
| 30-Oct-2019 12:25:09 | Successfully built c8eae8fb9a13 |
| 30-Oct-2019 12:25:09 | Successfully tagged clowder/extractors-simple-extractor-python3:onbuild |
| 30-Oct-2019 12:25:09 | Sending build context to Docker daemon 13.31kB |
| 30-Oct-2019 12:25:09 | |
| 30-Oct-2019 12:25:09 | Step 1/11 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:09 | Step 2/11 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:latest |
| 30-Oct-2019 12:25:09 | ---> 58b9afb82e5b |
| 30-Oct-2019 12:25:09 | Step 3/11 : ENV R_SCRIPT="" R_FUNCTION="" |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 0c24a3b85f48 |
| 30-Oct-2019 12:25:09 | Step 4/11 : RUN echo "deb http://cran.rstudio.com/bin/linux/ubuntu xenial/" > /etc/apt/sources.list.d/R.list && apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E298A3A825C0D65DFD57CBB651716619E084DAB9 && apt-get -q -q update && apt-get -y install --no-install-recommends r-base-core r-base-dev && rm -rf /var/lib/apt/lists/* && Rscript --vanilla -e "install.packages('jsonlite', repos='http://cran.rstudio.com/'); print(system.file(package = 'jsonlite')); q(status=as.integer(system.file(package = 'jsonlite') == ''))" |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 987165e71546 |
| 30-Oct-2019 12:25:09 | Step 5/11 : COPY r_extractor.py launcher.R /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> b9d788545873 |
| 30-Oct-2019 12:25:09 | Step 6/11 : ONBUILD COPY packages.* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> b724c6d97d72 |
| 30-Oct-2019 12:25:09 | Step 7/11 : ONBUILD RUN if [ -e packages.apt ]; then apt-get -q -q update && xargs apt-get -y install --no-install-recommends < packages.apt && rm -rf /var/lib/apt/lists/*; fi |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 060757809f46 |
| 30-Oct-2019 12:25:09 | Step 8/11 : ONBUILD COPY docker.R* Dockerfile /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 2727c5f92f37 |
| 30-Oct-2019 12:25:09 | Step 9/11 : ONBUILD RUN if [ -e docker.R ]; then Rscript docker.R; fi |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> 3a5f1d877459 |
| 30-Oct-2019 12:25:09 | Step 10/11 : ONBUILD ADD . /home/clowder/ |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> c0f7a571223b |
| 30-Oct-2019 12:25:09 | Step 11/11 : CMD python r_extractor.py |
| 30-Oct-2019 12:25:09 | ---> Using cache |
| 30-Oct-2019 12:25:09 | ---> d84fdb8cf328 |
| 30-Oct-2019 12:25:09 | Successfully built d84fdb8cf328 |
| 30-Oct-2019 12:25:09 | Successfully tagged clowder/extractors-simple-r-extractor-python3:onbuild |
| 30-Oct-2019 12:25:10 | Sending build context to Docker daemon 9.216kB |
| 30-Oct-2019 12:25:10 | |
| 30-Oct-2019 12:25:10 | Step 1/3 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:10 | Step 2/3 : FROM clowder/pyclowder${PYCLOWDER_PYTHON}:onbuild |
| 30-Oct-2019 12:25:10 | # Executing 5 build triggers |
| 30-Oct-2019 12:25:10 | ---> Using cache |
| 30-Oct-2019 12:25:10 | ---> Using cache |
| 30-Oct-2019 12:25:10 | ---> Using cache |
| 30-Oct-2019 12:25:10 | ---> Using cache |
| 30-Oct-2019 12:25:10 | ---> Using cache |
| 30-Oct-2019 12:25:10 | ---> 399e7fda9f70 |
| 30-Oct-2019 12:25:10 | Step 3/3 : ENV MAIN_SCRIPT="wordcount.py" |
| 30-Oct-2019 12:25:10 | ---> Using cache |
| 30-Oct-2019 12:25:10 | ---> 4a6da7ff6e09 |
| 30-Oct-2019 12:25:10 | Successfully built 4a6da7ff6e09 |
| 30-Oct-2019 12:25:12 | Successfully tagged clowder/extractors-wordcount:latest |
| 30-Oct-2019 12:25:12 | Sending build context to Docker daemon 5.12kB |
| 30-Oct-2019 12:25:12 | |
| 30-Oct-2019 12:25:12 | Step 1/4 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:12 | Step 2/4 : FROM clowder/extractors-simple-extractor${PYCLOWDER_PYTHON}:onbuild |
| 30-Oct-2019 12:25:13 | # Executing 5 build triggers |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> 9d950e820a31 |
| 30-Oct-2019 12:25:13 | Step 3/4 : ENV EXTRACTION_FUNC="wordcount" |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> 8e76e35ccb9f |
| 30-Oct-2019 12:25:13 | Step 4/4 : ENV EXTRACTION_MODULE="wordcount" |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> fe651e359811 |
| 30-Oct-2019 12:25:13 | Successfully built fe651e359811 |
| 30-Oct-2019 12:25:13 | Successfully tagged clowder/extractors-wordcount-simple-extractor:latest |
| 30-Oct-2019 12:25:13 | Sending build context to Docker daemon 5.12kB |
| 30-Oct-2019 12:25:13 | |
| 30-Oct-2019 12:25:13 | Step 1/3 : ARG PYCLOWDER_PYTHON="" |
| 30-Oct-2019 12:25:13 | Step 2/3 : FROM clowder/extractors-simple-r-extractor${PYCLOWDER_PYTHON}:onbuild |
| 30-Oct-2019 12:25:13 | # Executing 5 build triggers |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> 54a8098649b3 |
| 30-Oct-2019 12:25:13 | Step 3/3 : ENV R_SCRIPT="wordcount.R" R_FUNCTION="process_file" |
| 30-Oct-2019 12:25:13 | ---> Using cache |
| 30-Oct-2019 12:25:13 | ---> 59778e9ffc5e |
| 30-Oct-2019 12:25:13 | Successfully built 59778e9ffc5e |
| 30-Oct-2019 12:25:13 | Successfully tagged clowder/extractors-wordcount-simple-r-extractor:latest |
| 30-Oct-2019 12:25:13 | The push refers to repository [docker.io/clowder/pyclowder] |
| 30-Oct-2019 12:25:14 | e00e3667bf4c: Preparing |
| 30-Oct-2019 12:25:14 | 5c1dd48a070f: Preparing |
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| 30-Oct-2019 12:25:14 | 20a797da9660: Waiting |
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| 30-Oct-2019 12:25:14 | 29f36b5893dc: Waiting |
| 30-Oct-2019 12:25:16 | 5c1dd48a070f: Pushed |
| 30-Oct-2019 12:25:16 | 5dba55abf33a: Pushed |
| 30-Oct-2019 12:25:16 | c03fe4750d73: Pushed |
| 30-Oct-2019 12:25:16 | e00e3667bf4c: Pushed |
| 30-Oct-2019 12:25:16 | ccdb13a20bf2: Layer already exists |
| 30-Oct-2019 12:25:16 | 9513cdf4e497: Layer already exists |
| 30-Oct-2019 12:25:16 | 7f083f9454c0: Layer already exists |
| 30-Oct-2019 12:25:16 | 29f36b5893dc: Layer already exists |
| 30-Oct-2019 12:25:17 | fa4b5effa4f5: Pushed |
| 30-Oct-2019 12:25:23 | 20a797da9660: Pushed |
| 30-Oct-2019 12:25:25 | develop: digest: sha256:9f79f060590e7a3905a6115a88fe29de50f2128b2df2757d38638f6b996a9774 size: 2404 |
| 30-Oct-2019 12:25:26 | The push refers to repository [docker.io/clowder/pyclowder-python3] |
| 30-Oct-2019 12:25:26 | 5ae921a136d7: Preparing |
| 30-Oct-2019 12:25:26 | a99cf1c7a866: Preparing |
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| 30-Oct-2019 12:25:26 | 3fdf13d15af3: Waiting |
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| 30-Oct-2019 12:25:26 | 9513cdf4e497: Waiting |
| 30-Oct-2019 12:25:26 | ccdb13a20bf2: Waiting |
| 30-Oct-2019 12:25:28 | 5ae921a136d7: Pushed |
| 30-Oct-2019 12:25:28 | a99cf1c7a866: Pushed |
| 30-Oct-2019 12:25:28 | b80314bdd0a7: Pushed |
| 30-Oct-2019 12:25:28 | 0eb7a5c4d1e5: Pushed |
| 30-Oct-2019 12:25:28 | ccdb13a20bf2: Layer already exists |
| 30-Oct-2019 12:25:28 | 2281caf3d3a3: Pushed |
| 30-Oct-2019 12:25:29 | 9513cdf4e497: Layer already exists |
| 30-Oct-2019 12:25:29 | 7f083f9454c0: Layer already exists |
| 30-Oct-2019 12:25:29 | 29f36b5893dc: Layer already exists |
| 30-Oct-2019 12:25:35 | 3fdf13d15af3: Pushed |
| 30-Oct-2019 12:25:39 | develop: digest: sha256:33e65d1f8f007d1927b821c56e684406d82e88bba8e7fa2a5876096517a3760c size: 2404 |
| 30-Oct-2019 12:25:39 | The push refers to repository [docker.io/clowder/extractors-wordcount] |
| 30-Oct-2019 12:25:39 | f724615073f0: Preparing |
| 30-Oct-2019 12:25:39 | 7962a41b7f04: Preparing |
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| 30-Oct-2019 12:25:39 | 29f36b5893dc: Preparing |
| 30-Oct-2019 12:25:39 | 3fdf13d15af3: Waiting |
| 30-Oct-2019 12:25:39 | ccdb13a20bf2: Waiting |
| 30-Oct-2019 12:25:39 | 2281caf3d3a3: Waiting |
| 30-Oct-2019 12:25:39 | 9513cdf4e497: Waiting |
| 30-Oct-2019 12:25:39 | b80314bdd0a7: Waiting |
| 30-Oct-2019 12:25:39 | 7f083f9454c0: Waiting |
| 30-Oct-2019 12:25:39 | 0eb7a5c4d1e5: Waiting |
| 30-Oct-2019 12:25:40 | a99cf1c7a866: Mounted from clowder/pyclowder-python3 |
| 30-Oct-2019 12:25:40 | 2281caf3d3a3: Mounted from clowder/pyclowder-python3 |
| 30-Oct-2019 12:25:41 | 7962a41b7f04: Pushed |
| 30-Oct-2019 12:25:41 | 773b2642d3b7: Pushed |
| 30-Oct-2019 12:25:41 | f724615073f0: Pushed |
| 30-Oct-2019 12:25:41 | b80314bdd0a7: Mounted from clowder/pyclowder-python3 |
| 30-Oct-2019 12:25:41 | ccdb13a20bf2: Layer already exists |
| 30-Oct-2019 12:25:42 | 9513cdf4e497: Layer already exists |
| 30-Oct-2019 12:25:42 | 7f083f9454c0: Layer already exists |
| 30-Oct-2019 12:25:42 | 0eb7a5c4d1e5: Mounted from clowder/pyclowder-python3 |
| 30-Oct-2019 12:25:42 | 29f36b5893dc: Layer already exists |
| 30-Oct-2019 12:25:42 | 3fdf13d15af3: Mounted from clowder/pyclowder-python3 |
| 30-Oct-2019 12:25:42 | 5ae921a136d7: Mounted from clowder/pyclowder-python3 |
| 30-Oct-2019 12:25:45 | develop: digest: sha256:94bccf0b0e9833780a79a5ad941dd90598c80aa9cc0dc612ae231bc7e4c5b2fc size: 3026 |
| 30-Oct-2019 12:25:45 | The push refers to repository [docker.io/clowder/pyclowder] |
| 30-Oct-2019 12:25:45 | e00e3667bf4c: Preparing |
| 30-Oct-2019 12:25:45 | 5c1dd48a070f: Preparing |
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| 30-Oct-2019 12:25:45 | 29f36b5893dc: Preparing |
| 30-Oct-2019 12:25:45 | 20a797da9660: Waiting |
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| 30-Oct-2019 12:25:45 | 9513cdf4e497: Waiting |
| 30-Oct-2019 12:25:45 | 29f36b5893dc: Waiting |
| 30-Oct-2019 12:25:45 | e00e3667bf4c: Layer already exists |
| 30-Oct-2019 12:25:45 | c03fe4750d73: Layer already exists |
| 30-Oct-2019 12:25:45 | 5dba55abf33a: Layer already exists |
| 30-Oct-2019 12:25:45 | 5c1dd48a070f: Layer already exists |
| 30-Oct-2019 12:25:45 | fa4b5effa4f5: Layer already exists |
| 30-Oct-2019 12:25:46 | ccdb13a20bf2: Layer already exists |
| 30-Oct-2019 12:25:46 | 7f083f9454c0: Layer already exists |
| 30-Oct-2019 12:25:46 | 20a797da9660: Layer already exists |
| 30-Oct-2019 12:25:46 | 9513cdf4e497: Layer already exists |
| 30-Oct-2019 12:25:46 | 29f36b5893dc: Layer already exists |
| 30-Oct-2019 12:25:48 | develop-onbuild: digest: sha256:d976c3f68c38098872d95475c39cb4199270bd01f49d03d85f3871f60df9c2d5 size: 2404 |
| 30-Oct-2019 12:25:49 | The push refers to repository [docker.io/clowder/pyclowder-python3] |
| 30-Oct-2019 12:25:49 | 5ae921a136d7: Preparing |
| 30-Oct-2019 12:25:49 | a99cf1c7a866: Preparing |
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| 30-Oct-2019 12:25:49 | 29f36b5893dc: Preparing |
| 30-Oct-2019 12:25:49 | ccdb13a20bf2: Waiting |
| 30-Oct-2019 12:25:49 | 9513cdf4e497: Waiting |
| 30-Oct-2019 12:25:49 | 3fdf13d15af3: Waiting |
| 30-Oct-2019 12:25:49 | 7f083f9454c0: Waiting |
| 30-Oct-2019 12:25:49 | 29f36b5893dc: Waiting |
| 30-Oct-2019 12:25:49 | b80314bdd0a7: Layer already exists |
| 30-Oct-2019 12:25:49 | 0eb7a5c4d1e5: Layer already exists |
| 30-Oct-2019 12:25:49 | 5ae921a136d7: Layer already exists |
| 30-Oct-2019 12:25:49 | 2281caf3d3a3: Layer already exists |
| 30-Oct-2019 12:25:49 | a99cf1c7a866: Layer already exists |
| 30-Oct-2019 12:25:49 | ccdb13a20bf2: Layer already exists |
| 30-Oct-2019 12:25:49 | 9513cdf4e497: Layer already exists |
| 30-Oct-2019 12:25:49 | 7f083f9454c0: Layer already exists |
| 30-Oct-2019 12:25:49 | 3fdf13d15af3: Layer already exists |
| 30-Oct-2019 12:25:49 | 29f36b5893dc: Layer already exists |
| 30-Oct-2019 12:25:51 | develop-onbuild: digest: sha256:08ce6bbf5754b7a171e6d231ef7edf73d7041e2bf209ad2ed59669421a6ac2c4 size: 2404 |
| 30-Oct-2019 12:25:52 | The push refers to repository [docker.io/clowder/extractors-binary-preview] |
| 30-Oct-2019 12:25:52 | ec5961d7361b: Preparing |
| 30-Oct-2019 12:25:52 | 4a28e4612f7e: Preparing |
| 30-Oct-2019 12:25:52 | 6e42a58fe9ab: Preparing |
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| 30-Oct-2019 12:25:52 | fa4b5effa4f5: Waiting |
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| 30-Oct-2019 12:25:52 | 29f36b5893dc: Waiting |
| 30-Oct-2019 12:25:52 | e00e3667bf4c: Mounted from clowder/pyclowder |
| 30-Oct-2019 12:25:53 | 5c1dd48a070f: Mounted from clowder/pyclowder |
| 30-Oct-2019 12:25:53 | fa4b5effa4f5: Mounted from clowder/pyclowder |
| 30-Oct-2019 12:25:53 | c03fe4750d73: Mounted from clowder/pyclowder |
| 30-Oct-2019 12:25:54 | 6e42a58fe9ab: Pushed |
| 30-Oct-2019 12:25:54 | 5dba55abf33a: Mounted from clowder/pyclowder |
| 30-Oct-2019 12:25:54 | ccdb13a20bf2: Layer already exists |
| 30-Oct-2019 12:25:54 | 4a28e4612f7e: Pushed |
| 30-Oct-2019 12:25:54 | 20a797da9660: Mounted from clowder/pyclowder |
| 30-Oct-2019 12:25:54 | 9513cdf4e497: Layer already exists |
| 30-Oct-2019 12:25:54 | ec5961d7361b: Pushed |
| 30-Oct-2019 12:25:54 | 7f083f9454c0: Layer already exists |
| 30-Oct-2019 12:25:55 | 29f36b5893dc: Layer already exists |
| 30-Oct-2019 12:25:57 | develop-onbuild: digest: sha256:f5c472452b9715cc8530dbbbfc96fc611f64220e3b5552cf417765d0e617dbff size: 3027 |
| 30-Oct-2019 12:25:57 | The push refers to repository [docker.io/clowder/extractors-binary-preview-python3] |
| 30-Oct-2019 12:25:57 | 3eeb72024b67: Preparing |
| 30-Oct-2019 12:25:57 | 0c78a339af9b: Preparing |
| 30-Oct-2019 12:25:57 | 139066153095: Preparing |
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| 30-Oct-2019 12:25:57 | 3fdf13d15af3: Waiting |
| 30-Oct-2019 12:25:57 | ccdb13a20bf2: Waiting |
| 30-Oct-2019 12:25:57 | 9513cdf4e497: Waiting |
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| 30-Oct-2019 12:25:57 | b80314bdd0a7: Waiting |
| 30-Oct-2019 12:25:58 | 5ae921a136d7: Mounted from clowder/extractors-wordcount |
| 30-Oct-2019 12:25:58 | a99cf1c7a866: Mounted from clowder/extractors-wordcount |
| 30-Oct-2019 12:25:58 | 2281caf3d3a3: Mounted from clowder/extractors-wordcount |
| 30-Oct-2019 12:25:59 | b80314bdd0a7: Mounted from clowder/extractors-wordcount |
| 30-Oct-2019 12:25:59 | 0c78a339af9b: Pushed |
| 30-Oct-2019 12:25:59 | 0eb7a5c4d1e5: Mounted from clowder/extractors-wordcount |
| 30-Oct-2019 12:25:59 | ccdb13a20bf2: Layer already exists |
| 30-Oct-2019 12:25:59 | 139066153095: Pushed |
| 30-Oct-2019 12:25:59 | 3eeb72024b67: Pushed |
| 30-Oct-2019 12:25:59 | 9513cdf4e497: Layer already exists |
| 30-Oct-2019 12:25:59 | 7f083f9454c0: Layer already exists |
| 30-Oct-2019 12:26:00 | 29f36b5893dc: Layer already exists |
| 30-Oct-2019 12:26:00 | 3fdf13d15af3: Mounted from clowder/extractors-wordcount |
| 30-Oct-2019 12:26:06 | develop-onbuild: digest: sha256:22464e30a1fe604c542be68f5aa698b76569dee8002f0bdc1d8fc4c38eb127c2 size: 3027 |
| 30-Oct-2019 12:26:06 | The push refers to repository [docker.io/clowder/extractors-simple-extractor] |
| 30-Oct-2019 12:26:06 | fcaf46b28420: Preparing |
| 30-Oct-2019 12:26:06 | e00e3667bf4c: Preparing |
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| 30-Oct-2019 12:26:06 | 29f36b5893dc: Preparing |
| 30-Oct-2019 12:26:06 | 5dba55abf33a: Waiting |
| 30-Oct-2019 12:26:06 | 20a797da9660: Waiting |
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| 30-Oct-2019 12:26:06 | 9513cdf4e497: Waiting |
| 30-Oct-2019 12:26:06 | 7f083f9454c0: Waiting |
| 30-Oct-2019 12:26:06 | 29f36b5893dc: Waiting |
| 30-Oct-2019 12:26:07 | fa4b5effa4f5: Mounted from clowder/extractors-binary-preview |
| 30-Oct-2019 12:26:07 | e00e3667bf4c: Mounted from clowder/extractors-binary-preview |
| 30-Oct-2019 12:26:07 | 5c1dd48a070f: Mounted from clowder/extractors-binary-preview |
| 30-Oct-2019 12:26:07 | c03fe4750d73: Mounted from clowder/extractors-binary-preview |
| 30-Oct-2019 12:26:07 | ccdb13a20bf2: Layer already exists |
| 30-Oct-2019 12:26:08 | 5dba55abf33a: Mounted from clowder/extractors-binary-preview |
| 30-Oct-2019 12:26:08 | 9513cdf4e497: Layer already exists |
| 30-Oct-2019 12:26:08 | 20a797da9660: Mounted from clowder/extractors-binary-preview |
| 30-Oct-2019 12:26:08 | 7f083f9454c0: Layer already exists |
| 30-Oct-2019 12:26:08 | 29f36b5893dc: Layer already exists |
| 30-Oct-2019 12:26:09 | fcaf46b28420: Pushed |
| 30-Oct-2019 12:26:11 | develop-onbuild: digest: sha256:b2ace5ebc3c72d82f3631e98b3c2b2ad6025c02695ccc05112b943747e9d8cf5 size: 2611 |
| 30-Oct-2019 12:26:12 | The push refers to repository [docker.io/clowder/extractors-simple-extractor-python3] |
| 30-Oct-2019 12:26:12 | 885a39bfef08: Preparing |
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| 30-Oct-2019 12:26:12 | 3fdf13d15af3: Waiting |
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| 30-Oct-2019 12:26:12 | 9513cdf4e497: Waiting |
| 30-Oct-2019 12:26:12 | 7f083f9454c0: Waiting |
| 30-Oct-2019 12:26:12 | 29f36b5893dc: Waiting |
| 30-Oct-2019 12:26:12 | 0eb7a5c4d1e5: Waiting |
| 30-Oct-2019 12:26:13 | b80314bdd0a7: Mounted from clowder/extractors-binary-preview-python3 |
| 30-Oct-2019 12:26:13 | 5ae921a136d7: Mounted from clowder/extractors-binary-preview-python3 |
| 30-Oct-2019 12:26:13 | 2281caf3d3a3: Mounted from clowder/extractors-binary-preview-python3 |
| 30-Oct-2019 12:26:13 | a99cf1c7a866: Mounted from clowder/extractors-binary-preview-python3 |
| 30-Oct-2019 12:26:13 | ccdb13a20bf2: Layer already exists |
| 30-Oct-2019 12:26:13 | 9513cdf4e497: Layer already exists |
| 30-Oct-2019 12:26:14 | 0eb7a5c4d1e5: Mounted from clowder/extractors-binary-preview-python3 |
| 30-Oct-2019 12:26:14 | 7f083f9454c0: Layer already exists |
| 30-Oct-2019 12:26:14 | 3fdf13d15af3: Mounted from clowder/extractors-binary-preview-python3 |
| 30-Oct-2019 12:26:14 | 29f36b5893dc: Layer already exists |
| 30-Oct-2019 12:26:14 | 885a39bfef08: Pushed |
| 30-Oct-2019 12:26:16 | develop-onbuild: digest: sha256:2189c14d74f0694089c446540a1f6301f054a0dce1b186b49eee21b3318e7aaf size: 2611 |
| 30-Oct-2019 12:26:17 | The push refers to repository [docker.io/clowder/extractors-simple-r-extractor] |
| 30-Oct-2019 12:26:17 | 5f687d7f0cbe: Preparing |
| 30-Oct-2019 12:26:17 | 9b0d96fbe045: Preparing |
| 30-Oct-2019 12:26:17 | e00e3667bf4c: Preparing |
| 30-Oct-2019 12:26:17 | 5c1dd48a070f: Preparing |
| 30-Oct-2019 12:26:17 | fa4b5effa4f5: Preparing |
| 30-Oct-2019 12:26:17 | c03fe4750d73: Preparing |
| 30-Oct-2019 12:26:17 | 5dba55abf33a: Preparing |
| 30-Oct-2019 12:26:17 | 20a797da9660: Preparing |
| 30-Oct-2019 12:26:17 | ccdb13a20bf2: Preparing |
| 30-Oct-2019 12:26:17 | 9513cdf4e497: Preparing |
| 30-Oct-2019 12:26:17 | 7f083f9454c0: Preparing |
| 30-Oct-2019 12:26:17 | 29f36b5893dc: Preparing |
| 30-Oct-2019 12:26:17 | 5dba55abf33a: Waiting |
| 30-Oct-2019 12:26:17 | 20a797da9660: Waiting |
| 30-Oct-2019 12:26:17 | ccdb13a20bf2: Waiting |
| 30-Oct-2019 12:26:17 | 9513cdf4e497: Waiting |
| 30-Oct-2019 12:26:17 | 7f083f9454c0: Waiting |
| 30-Oct-2019 12:26:17 | 29f36b5893dc: Waiting |
| 30-Oct-2019 12:26:17 | c03fe4750d73: Waiting |
| 30-Oct-2019 12:26:18 | 5c1dd48a070f: Mounted from clowder/extractors-simple-extractor |
| 30-Oct-2019 12:26:18 | fa4b5effa4f5: Mounted from clowder/extractors-simple-extractor |
| 30-Oct-2019 12:26:18 | e00e3667bf4c: Mounted from clowder/extractors-simple-extractor |
| 30-Oct-2019 12:26:19 | c03fe4750d73: Mounted from clowder/extractors-simple-extractor |
| 30-Oct-2019 12:26:19 | 5dba55abf33a: Mounted from clowder/extractors-simple-extractor |
| 30-Oct-2019 12:26:19 | 20a797da9660: Mounted from clowder/extractors-simple-extractor |
| 30-Oct-2019 12:26:20 | ccdb13a20bf2: Layer already exists |
| 30-Oct-2019 12:26:20 | 9513cdf4e497: Layer already exists |
| 30-Oct-2019 12:26:20 | 7f083f9454c0: Layer already exists |
| 30-Oct-2019 12:26:20 | 5f687d7f0cbe: Pushed |
| 30-Oct-2019 12:26:21 | 29f36b5893dc: Layer already exists |
| 30-Oct-2019 12:26:47 | 9b0d96fbe045: Pushed |
| 30-Oct-2019 12:26:50 | develop-onbuild: digest: sha256:03937c3fb3a5d564c19d22a0e2e9ff88e9bd8d10f6dbeacba87d0cad26b6e0c8 size: 2824 |
| 30-Oct-2019 12:26:50 | The push refers to repository [docker.io/clowder/extractors-simple-r-extractor-python3] |
| 30-Oct-2019 12:26:50 | 571f618746b3: Preparing |
| 30-Oct-2019 12:26:50 | 42212374c93d: Preparing |
| 30-Oct-2019 12:26:50 | 5ae921a136d7: Preparing |
| 30-Oct-2019 12:26:50 | a99cf1c7a866: Preparing |
| 30-Oct-2019 12:26:50 | 2281caf3d3a3: Preparing |
| 30-Oct-2019 12:26:50 | b80314bdd0a7: Preparing |
| 30-Oct-2019 12:26:50 | 0eb7a5c4d1e5: Preparing |
| 30-Oct-2019 12:26:50 | 3fdf13d15af3: Preparing |
| 30-Oct-2019 12:26:50 | ccdb13a20bf2: Preparing |
| 30-Oct-2019 12:26:50 | 9513cdf4e497: Preparing |
| 30-Oct-2019 12:26:50 | 7f083f9454c0: Preparing |
| 30-Oct-2019 12:26:50 | 29f36b5893dc: Preparing |
| 30-Oct-2019 12:26:50 | b80314bdd0a7: Waiting |
| 30-Oct-2019 12:26:50 | 9513cdf4e497: Waiting |
| 30-Oct-2019 12:26:50 | 0eb7a5c4d1e5: Waiting |
| 30-Oct-2019 12:26:50 | 3fdf13d15af3: Waiting |
| 30-Oct-2019 12:26:50 | ccdb13a20bf2: Waiting |
| 30-Oct-2019 12:26:50 | 7f083f9454c0: Waiting |
| 30-Oct-2019 12:26:50 | 29f36b5893dc: Waiting |
| 30-Oct-2019 12:26:51 | 5ae921a136d7: Mounted from clowder/extractors-simple-extractor-python3 |
| 30-Oct-2019 12:26:51 | 2281caf3d3a3: Mounted from clowder/extractors-simple-extractor-python3 |
| 30-Oct-2019 12:26:51 | a99cf1c7a866: Mounted from clowder/extractors-simple-extractor-python3 |
| 30-Oct-2019 12:26:52 | 0eb7a5c4d1e5: Mounted from clowder/extractors-simple-extractor-python3 |
| 30-Oct-2019 12:26:52 | b80314bdd0a7: Mounted from clowder/extractors-simple-extractor-python3 |
| 30-Oct-2019 12:26:52 | 3fdf13d15af3: Mounted from clowder/extractors-simple-extractor-python3 |
| 30-Oct-2019 12:26:52 | ccdb13a20bf2: Layer already exists |
| 30-Oct-2019 12:26:53 | 9513cdf4e497: Layer already exists |
| 30-Oct-2019 12:26:53 | 571f618746b3: Pushed |
| 30-Oct-2019 12:26:53 | 7f083f9454c0: Layer already exists |
| 30-Oct-2019 12:26:53 | 29f36b5893dc: Layer already exists |
| 30-Oct-2019 12:27:23 | 42212374c93d: Pushed |
| 30-Oct-2019 12:27:26 | develop-onbuild: digest: sha256:82d67677a96abb0e77b99271292b9d082569c7be9a70c77566a8d859cf186da5 size: 2824 |
| 30-Oct-2019 12:27:26 | Finished task 'docker push' with result: Success |
| 30-Oct-2019 12:27:26 | Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit' |
| 30-Oct-2019 12:27:26 | Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC265-JOB1... |
| 30-Oct-2019 12:27:26 | Finished task 'test results' with result: Success |
| 30-Oct-2019 12:27:26 | Running post build plugin 'Docker Container Cleanup' |
| 30-Oct-2019 12:27:26 | Running post build plugin 'NCover Results Collector' |
| 30-Oct-2019 12:27:26 | Running post build plugin 'Clover Results Collector' |
| 30-Oct-2019 12:27:26 | Running post build plugin 'npm Cache Cleanup' |
| 30-Oct-2019 12:27:26 | Running post build plugin 'Artifact Copier' |
| 30-Oct-2019 12:27:26 | Finalising the build... |
| 30-Oct-2019 12:27:26 | Stopping timer. |
| 30-Oct-2019 12:27:26 | Build CATS-PYC265-JOB1-28 completed. |
| 30-Oct-2019 12:27:26 | Running on server: post build plugin 'NCover Results Collector' |
| 30-Oct-2019 12:27:26 | Running on server: post build plugin 'Build Hanging Detection Configuration' |
| 30-Oct-2019 12:27:26 | Running on server: post build plugin 'Clover Delta Calculator' |
| 30-Oct-2019 12:27:26 | Running on server: post build plugin 'Maven Dependencies Postprocessor' |
| 30-Oct-2019 12:27:26 | All post build plugins have finished |
| 30-Oct-2019 12:27:26 | Generating build results summary... |
| 30-Oct-2019 12:27:26 | Saving build results to disk... |
| 30-Oct-2019 12:27:26 | Logging substituted variables... |
| 30-Oct-2019 12:27:26 | Indexing build results... |
| 30-Oct-2019 12:27:26 | Finished building CATS-PYC265-JOB1-28. |