Next Generation of pyClowder
Build: #15 failed
Job: Default Job failed
Build log
The build generated 121 lines of output. Download or view full build log.
| 30-Nov-2018 11:20:50 | Build Clowder - pyclowder2 - clowder-clients-clean - Default Job #15 (CATS-PYC267-JOB1-15) started building on agent buildserver-3.os.ncsa.edu |
| 30-Nov-2018 11:20:50 | Remote agent on host buildserver-3.os.ncsa.edu |
| 30-Nov-2018 11:20:50 | Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1 |
| 30-Nov-2018 11:20:50 | Executing build Clowder - pyclowder2 - clowder-clients-clean - Default Job #15 (CATS-PYC267-JOB1-15) |
| 30-Nov-2018 11:20:50 | Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' |
| 30-Nov-2018 11:20:50 | Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1 |
| 30-Nov-2018 11:20:50 | Updating source code to revision: 00e0e6ad4085c8bb3deceeaf955e3a2d6422e5c4 |
| 30-Nov-2018 11:20:50 | Fetching 'refs/heads/clowder-clients-clean' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git'. Will try to do a shallow fetch. |
| 30-Nov-2018 11:20:50 | Warning: Permanently added '[127.0.0.1]:34512' (RSA) to the list of known hosts. |
| 30-Nov-2018 11:20:50 | Checking out revision 00e0e6ad4085c8bb3deceeaf955e3a2d6422e5c4. |
| 30-Nov-2018 11:20:50 | Warning: you are leaving 21 commits behind, not connected to |
| 30-Nov-2018 11:20:50 | any of your branches: |
| 30-Nov-2018 11:20:50 | |
| 30-Nov-2018 11:20:50 | 1110968 all methods inside CollectionsApi |
| 30-Nov-2018 11:20:50 | e06ab41 all methods but 2 removed as were replicated in FilesApi |
| 30-Nov-2018 11:20:50 | 5f11e00 connectors changed to match develop |
| 30-Nov-2018 11:20:50 | a172561 updated this with changes from develop - mimetype no longer appeared to be used for files |
| 30-Nov-2018 11:20:50 | ... and 17 more. |
| 30-Nov-2018 11:20:50 | |
| 30-Nov-2018 11:20:50 | If you want to keep them by creating a new branch, this may be a good time |
| 30-Nov-2018 11:20:50 | to do so with: |
| 30-Nov-2018 11:20:50 | |
| 30-Nov-2018 11:20:50 | git branch <new-branch-name> 1110968 |
| 30-Nov-2018 11:20:50 | |
| 30-Nov-2018 11:20:50 | Switched to branch 'clowder-clients-clean' |
| 30-Nov-2018 11:20:50 | Updated source code to revision: 00e0e6ad4085c8bb3deceeaf955e3a2d6422e5c4 |
| 30-Nov-2018 11:20:50 | Finished task 'Checkout Default Repository' with result: Success |
| 30-Nov-2018 11:20:50 | Running pre-build action: VCS Version Collector |
| 30-Nov-2018 11:20:50 | Starting task 'pytest' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' |
| 30-Nov-2018 11:20:50 | Beginning to execute external process for build 'Clowder - pyclowder2 - clowder-clients-clean - Default Job #15 (CATS-PYC267-JOB1-15)' ... running command line: /home/bamboo/bamboo-agent-home/temp/CATS-PYC267-JOB1-15-ScriptBuildTask-3982727055004116164.sh ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1 ... using extra environment variables: bamboo_planRepository_1_branch=clowder-clients-clean bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node bamboo_capability_system_builder_command_buckminster_4_4=/home/bamboo/buckminster-4.4/buckminster bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster bamboo_repository_157745170_git_branch=clowder-clients-clean bamboo_planRepository_1_branchDisplayName=clowder-clients-clean bamboo_repository_revision_number=00e0e6ad4085c8bb3deceeaf955e3a2d6422e5c4 bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC267-JOB1-15 bamboo_repository_157745170_revision_number=00e0e6ad4085c8bb3deceeaf955e3a2d6422e5c4 bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1 bamboo_planRepository_1_name=pyclowder2 bamboo_buildKey=CATS-PYC267-JOB1 bamboo_capability_system_os=linux bamboo_shortPlanName=clowder-clients-clean bamboo_planRepository_name=pyclowder2 bamboo_buildNumber=15 bamboo_capability_system_builder_node_grunt_6=/home/bamboo/node-v6.9.1/bin/grunt bamboo_repository_157745170_name=pyclowder2 bamboo_shortJobName=Default Job bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC267-JOB1-15 bamboo_repository_157745170_previous_revision_number=11109681d8b687cc1d7b55028e1ce83aebeb40e1 bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_agentId=143032321 bamboo_planName=Clowder - pyclowder2 - clowder-clients-clean bamboo_shortPlanKey=PYC267 bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt bamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node bamboo_shortJobKey=JOB1 bamboo_repository_157745170_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_planRepository_revision=00e0e6ad4085c8bb3deceeaf955e3a2d6422e5c4 bamboo_buildTimeStamp=2018-11-30T11:20:49.987-06:00 bamboo_repository_previous_revision_number=11109681d8b687cc1d7b55028e1ce83aebeb40e1 bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1 bamboo_planRepository_previousRevision=11109681d8b687cc1d7b55028e1ce83aebeb40e1 bamboo_repository_git_branch=clowder-clients-clean bamboo_buildResultKey=CATS-PYC267-JOB1-15 bamboo_repository_branch_name=clowder-clients-clean bamboo_buildPlanName=Clowder - pyclowder2 - clowder-clients-clean - Default Job bamboo_planRepository_1_revision=00e0e6ad4085c8bb3deceeaf955e3a2d6422e5c4 bamboo_capability_system_builder_command_python3=/usr/bin/python3 bamboo_repository_name=pyclowder2 bamboo_repository_157745170_branch_name=clowder-clients-clean bamboo_repository_157745170_git_username= bamboo_buildFailed=false bamboo_capability_system_docker_executable=/usr/bin/docker bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt bamboo_planRepository_branch=clowder-clients-clean bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir bamboo_capability_system_git_executable=/usr/bin/git bamboo_repository_git_username= bamboo_planRepository_1_previousRevision=11109681d8b687cc1d7b55028e1ce83aebeb40e1 bamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13 bamboo_planRepository_branchDisplayName=clowder-clients-clean bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs bamboo_planRepository_1_type=bbserver bamboo_planRepository_branchName=clowder-clients-clean bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7 bamboo_capability_system_hostname=buildserver-1 bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66 bamboo_capability_system_software_mongo=/usr/bin/mongo bamboo_plan_storageTag=plan-157548579 bamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66 bamboo_planRepository_1_username= bamboo_planRepository_type=bbserver bamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4 bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9 bamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1 bamboo_planKey=CATS-PYC267 bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_planRepository_username= bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66 bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41 bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60 bamboo_planRepository_1_branchName=clowder-clients-clean |
| 30-Nov-2018 11:20:50 | New python executable in /tmp/virtualenv/pyclowder2/bin/python2 |
| 30-Nov-2018 11:20:50 | Also creating executable in /tmp/virtualenv/pyclowder2/bin/python |
| 30-Nov-2018 11:20:53 | Installing setuptools, pkg_resources, pip, wheel...done. |
| 30-Nov-2018 11:20:53 | Running virtualenv with interpreter /usr/bin/python2 |
| 30-Nov-2018 11:20:53 | Collecting enum34==1.1.6 (from -r requirements.txt (line 1)) |
| 30-Nov-2018 11:20:53 | Using cached https://files.pythonhosted.org/packages/c5/db/e56e6b4bbac7c4a06de1c50de6fe1ef3810018ae11732a50f15f62c7d050/enum34-1.1.6-py2-none-any.whl |
| 30-Nov-2018 11:20:53 | Collecting pika==0.10.0 (from -r requirements.txt (line 2)) |
| 30-Nov-2018 11:20:53 | Using cached https://files.pythonhosted.org/packages/26/12/400cf0aca6b1ecf1f00dcd89b246e7a4c8558677304ba067167b8167e714/pika-0.10.0-py2.py3-none-any.whl |
| 30-Nov-2018 11:20:53 | Collecting PyYAML==3.11 (from -r requirements.txt (line 3)) |
| 30-Nov-2018 11:20:53 | Collecting requests==2.10.0 (from -r requirements.txt (line 4)) |
| 30-Nov-2018 11:20:53 | Using cached https://files.pythonhosted.org/packages/99/b4/63d99ba8e189c47d906b43bae18af4396e336f2b1bfec86af31efe2d2cb8/requests-2.10.0-py2.py3-none-any.whl |
| 30-Nov-2018 11:20:53 | Collecting wheel==0.24.0 (from -r requirements.txt (line 5)) |
| 30-Nov-2018 11:20:53 | Using cached https://files.pythonhosted.org/packages/e8/14/eaaac12b0432c984a27ad0050a5a0bedc6135df35a0f5f1f35228faf12d4/wheel-0.24.0-py2.py3-none-any.whl |
| 30-Nov-2018 11:20:53 | Collecting pytest==3.0.3 (from -r requirements.txt (line 6)) |
| 30-Nov-2018 11:20:53 | Using cached https://files.pythonhosted.org/packages/a4/e9/bf75a9a91c4a545bad262937d1defa90d95ac912118a706406e21aef889a/pytest-3.0.3-py2.py3-none-any.whl |
| 30-Nov-2018 11:20:53 | Collecting pytest-pep8==1.0.6 (from -r requirements.txt (line 7)) |
| 30-Nov-2018 11:20:54 | Collecting urllib3==1.14 (from -r requirements.txt (line 8)) |
| 30-Nov-2018 11:20:54 | Using cached https://files.pythonhosted.org/packages/73/55/63deba73d82dfa39974ca3903110c3e3557ff8758a3a79482810915b385d/urllib3-1.14-py2.py3-none-any.whl |
| 30-Nov-2018 11:20:54 | Collecting py>=1.4.29 (from pytest==3.0.3->-r requirements.txt (line 6)) |
| 30-Nov-2018 11:20:54 | Using cached https://files.pythonhosted.org/packages/3e/c7/3da685ef117d42ac8d71af525208759742dd235f8094221fdaafcd3dba8f/py-1.7.0-py2.py3-none-any.whl |
| 30-Nov-2018 11:20:54 | Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 30-Nov-2018 11:20:54 | Using cached https://files.pythonhosted.org/packages/42/3f/669429ce58de2c22d8d2c542752e137ec4b9885fff398d3eceb1a7f5acb4/pep8-1.7.1-py2.py3-none-any.whl |
| 30-Nov-2018 11:20:54 | Collecting pytest-cache (from pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 30-Nov-2018 11:20:54 | Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 30-Nov-2018 11:20:54 | Using cached https://files.pythonhosted.org/packages/f9/76/3343e69a2a1602052f587898934e5fea395d22310d39c07955596597227c/execnet-1.5.0-py2.py3-none-any.whl |
| 30-Nov-2018 11:20:54 | Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 30-Nov-2018 11:20:54 | Using cached https://files.pythonhosted.org/packages/67/08/4815a09603fc800209431bec5b8bd2acf2f95abdfb558a44a42507fb94da/apipkg-1.5-py2.py3-none-any.whl |
| 30-Nov-2018 11:20:54 | Installing collected packages: enum34, pika, PyYAML, requests, wheel, py, pytest, pep8, apipkg, execnet, pytest-cache, pytest-pep8, urllib3 |
| 30-Nov-2018 11:20:54 | Found existing installation: wheel 0.32.3 |
| 30-Nov-2018 11:20:54 | Uninstalling wheel-0.32.3: |
| 30-Nov-2018 11:20:54 | Successfully uninstalled wheel-0.32.3 |
| 30-Nov-2018 11:20:54 | Successfully installed PyYAML-3.11 apipkg-1.5 enum34-1.1.6 execnet-1.5.0 pep8-1.7.1 pika-0.10.0 py-1.7.0 pytest-3.0.3 pytest-cache-1.0 pytest-pep8-1.0.6 requests-2.10.0 urllib3-1.14 wheel-0.24.0 |
| 30-Nov-2018 11:20:55 | ============================= test session starts ============================== |
| 30-Nov-2018 11:20:55 | platform linux2 -- Python 2.7.12, pytest-3.0.3, py-1.7.0, pluggy-0.4.0 |
| 30-Nov-2018 11:20:55 | rootdir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1, inifile: setup.cfg |
| 30-Nov-2018 11:20:55 | plugins: pep8-1.0.6 |
| 30-Nov-2018 11:20:55 | collected 15 items |
| 30-Nov-2018 11:20:55 | |
| 30-Nov-2018 11:20:55 | setup.py . |
| 30-Nov-2018 11:20:55 | docs/source/conf.py . |
| 30-Nov-2018 11:20:55 | pyclowder/__init__.py . |
| 30-Nov-2018 11:20:55 | pyclowder/client.py . |
| 30-Nov-2018 11:20:55 | pyclowder/collections.py F |
| 30-Nov-2018 11:20:55 | pyclowder/connectors.py . |
| 30-Nov-2018 11:20:55 | pyclowder/datasets.py . |
| 30-Nov-2018 11:20:55 | pyclowder/extractors.py . |
| 30-Nov-2018 11:20:55 | pyclowder/files.py F |
| 30-Nov-2018 11:20:55 | pyclowder/geostreams.py . |
| 30-Nov-2018 11:20:55 | pyclowder/sections.py . |
| 30-Nov-2018 11:20:55 | pyclowder/utils.py . |
| 30-Nov-2018 11:20:55 | sample-extractors/echo/echo.py . |
| 30-Nov-2018 11:20:55 | sample-extractors/wordcount/wordcount.py . |
| 30-Nov-2018 11:20:55 | tests/clientTest.py . |
| 30-Nov-2018 11:20:55 | |
| 30-Nov-2018 11:20:55 | generated xml file: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1/test-reports/results.xml |
| 30-Nov-2018 11:20:55 | =================================== FAILURES =================================== |
| 30-Nov-2018 11:20:55 | __________________________________ PEP8-check __________________________________ |
| 30-Nov-2018 11:20:55 | /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1/pyclowder/collections.py:8:1: E302 expected 2 blank lines, found 1 |
| 30-Nov-2018 11:20:55 | class CollectionsApi(object): |
| 30-Nov-2018 11:20:55 | ^ |
| 30-Nov-2018 11:20:55 | |
| 30-Nov-2018 11:20:55 | __________________________________ PEP8-check __________________________________ |
| 30-Nov-2018 11:20:55 | /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1/pyclowder/files.py:32:1: E302 expected 2 blank lines, found 1 |
| 30-Nov-2018 11:20:55 | class FilesApi(object): |
| 30-Nov-2018 11:20:55 | ^ |
| 30-Nov-2018 11:20:55 | |
| 30-Nov-2018 11:20:55 | ===================== 2 failed, 13 passed in 0.31 seconds ====================== |
| 30-Nov-2018 11:20:55 | Failing task since return code of [/home/bamboo/bamboo-agent-home/temp/CATS-PYC267-JOB1-15-ScriptBuildTask-3982727055004116164.sh] was 1 while expected 0 |
| 30-Nov-2018 11:20:55 | Finished task 'pytest' with result: Failed |
| 30-Nov-2018 11:20:55 | Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit' |
| 30-Nov-2018 11:20:55 | Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1... |
| 30-Nov-2018 11:20:55 | Failing task since 2 failing test cases were found. |
| 30-Nov-2018 11:20:55 | Finished task 'test results' with result: Failed |
| 30-Nov-2018 11:20:55 | Running post build plugin 'Docker Container Cleanup' |
| 30-Nov-2018 11:20:55 | Running post build plugin 'NCover Results Collector' |
| 30-Nov-2018 11:20:55 | Running post build plugin 'Clover Results Collector' |
| 30-Nov-2018 11:20:55 | Running post build plugin 'npm Cache Cleanup' |
| 30-Nov-2018 11:20:55 | Running post build plugin 'Artifact Copier' |
| 30-Nov-2018 11:20:55 | Finalising the build... |
| 30-Nov-2018 11:20:55 | Stopping timer. |
| 30-Nov-2018 11:20:55 | Build CATS-PYC267-JOB1-15 completed. |
| 30-Nov-2018 11:20:55 | Running on server: post build plugin 'NCover Results Collector' |
| 30-Nov-2018 11:20:55 | Running on server: post build plugin 'Build Hanging Detection Configuration' |
| 30-Nov-2018 11:20:55 | Running on server: post build plugin 'Clover Delta Calculator' |
| 30-Nov-2018 11:20:55 | Running on server: post build plugin 'Maven Dependencies Postprocessor' |
| 30-Nov-2018 11:20:55 | All post build plugins have finished |
| 30-Nov-2018 11:20:55 | Generating build results summary... |
| 30-Nov-2018 11:20:55 | Saving build results to disk... |
| 30-Nov-2018 11:20:55 | Logging substituted variables... |
| 30-Nov-2018 11:20:55 | Indexing build results... |
| 30-Nov-2018 11:20:55 | Finished building CATS-PYC267-JOB1-15. |