Build: #74 was successful

Job: default was successful

Stages & jobs

  1. Default Stage

Build log

The build generated 246 lines of output. Download or view full build log.

29-Apr-2015 10:22:43 Build MMDB - Medici 1 GWT - sead - default #74 (MMDB-MEDICI70-JOB1-74) started building on agent buildserver-2.ncsa.illinois.edu
29-Apr-2015 10:22:43 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1
29-Apr-2015 10:22:43 Executing build MMDB - Medici 1 GWT - sead - default #74 (MMDB-MEDICI70-JOB1-74)
29-Apr-2015 10:22:43 Starting task 'Source Code Checkout' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
29-Apr-2015 10:22:43 Build always requires a clean checkout
29-Apr-2015 10:22:43 Cleaning build directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt'
29-Apr-2015 10:22:43 Build always requires a clean checkout
29-Apr-2015 10:22:43 Cleaning build directory '/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet'
29-Apr-2015 10:22:44 Updating source code to revision: 1ce16f5a6ff38e4b31645db512d1845a02d49575
29-Apr-2015 10:22:44 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/.git'.
29-Apr-2015 10:22:44 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/.git/
29-Apr-2015 10:22:45 Fetching 'refs/heads/sead' from 'https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web.git'. Will try to do a shallow fetch.
29-Apr-2015 10:22:59 From https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web
29-Apr-2015 10:22:59 * [new branch]      sead       -> sead
29-Apr-2015 10:22:59 Checking out revision 1ce16f5a6ff38e4b31645db512d1845a02d49575.
29-Apr-2015 10:23:01 Switched to branch 'sead'
29-Apr-2015 10:23:01 Updated source code to revision: 1ce16f5a6ff38e4b31645db512d1845a02d49575
29-Apr-2015 10:23:01 Updating source code to revision: 0b0c4e05e8f4518f20b5ff7ffd272304deeab48e
29-Apr-2015 10:23:02 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/.git'.
29-Apr-2015 10:23:02 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/.git/
29-Apr-2015 10:23:02 Fetching 'refs/heads/master' from 'https://opensource.ncsa.illinois.edu/stash/scm/cbi/cet.git'. Will try to do a shallow fetch.
29-Apr-2015 10:23:14 From https://opensource.ncsa.illinois.edu/stash/scm/cbi/cet
29-Apr-2015 10:23:14 * [new branch]      master     -> master
29-Apr-2015 10:23:14 Checking out revision 0b0c4e05e8f4518f20b5ff7ffd272304deeab48e.
29-Apr-2015 10:23:15 Checking out files:  32% (950/2937)   
29-Apr-2015 10:23:15 Checking out files:  33% (970/2937)   
29-Apr-2015 10:23:16 Checking out files:  34% (999/2937)   
29-Apr-2015 10:23:16 Checking out files:  35% (1028/2937)   
29-Apr-2015 10:23:16 Checking out files:  36% (1058/2937)   
29-Apr-2015 10:23:16 Checking out files:  37% (1087/2937)   
29-Apr-2015 10:23:16 Checking out files:  37% (1116/2937)   
29-Apr-2015 10:23:16 Checking out files:  38% (1117/2937)   
29-Apr-2015 10:23:16 Checking out files:  39% (1146/2937)   
29-Apr-2015 10:23:16 Checking out files:  40% (1175/2937)   
29-Apr-2015 10:23:17 Checking out files:  41% (1205/2937)   
29-Apr-2015 10:23:17 Checking out files:  42% (1234/2937)   
29-Apr-2015 10:23:17 Checking out files:  43% (1263/2937)   
29-Apr-2015 10:23:17 Checking out files:  44% (1293/2937)   
29-Apr-2015 10:23:17 Checking out files:  45% (1322/2937)   
29-Apr-2015 10:23:17 Checking out files:  46% (1352/2937)   
29-Apr-2015 10:23:17 Checking out files:  47% (1381/2937)   
29-Apr-2015 10:23:17 Checking out files:  48% (1410/2937)   
29-Apr-2015 10:23:17 Checking out files:  49% (1440/2937)   
29-Apr-2015 10:23:17 Checking out files:  50% (1469/2937)   
29-Apr-2015 10:23:17 Checking out files:  51% (1498/2937)   
29-Apr-2015 10:23:17 Checking out files:  51% (1526/2937)   
29-Apr-2015 10:23:18 Checking out files:  52% (1528/2937)   
29-Apr-2015 10:23:18 Checking out files:  53% (1557/2937)   
29-Apr-2015 10:23:18 Checking out files:  54% (1586/2937)   
29-Apr-2015 10:23:18 Checking out files:  54% (1601/2937)   
29-Apr-2015 10:23:18 Checking out files:  55% (1616/2937)   
29-Apr-2015 10:23:18 Checking out files:  56% (1645/2937)   
29-Apr-2015 10:23:19 Checking out files:  57% (1675/2937)   
29-Apr-2015 10:23:19 Checking out files:  58% (1704/2937)   
29-Apr-2015 10:23:19 Checking out files:  59% (1733/2937)   
29-Apr-2015 10:23:19 Checking out files:  60% (1763/2937)   
29-Apr-2015 10:23:19 Checking out files:  60% (1791/2937)   
29-Apr-2015 10:23:19 Checking out files:  61% (1792/2937)   
29-Apr-2015 10:23:19 Checking out files:  62% (1821/2937)   
29-Apr-2015 10:23:20 Checking out files:  63% (1851/2937)   
29-Apr-2015 10:23:20 Checking out files:  64% (1880/2937)   
29-Apr-2015 10:23:20 Checking out files:  65% (1910/2937)   
29-Apr-2015 10:23:20 Checking out files:  66% (1939/2937)   
29-Apr-2015 10:23:20 Checking out files:  67% (1968/2937)   
29-Apr-2015 10:23:20 Checking out files:  68% (1998/2937)   
29-Apr-2015 10:23:20 Checking out files:  68% (2025/2937)   
29-Apr-2015 10:23:20 Checking out files:  69% (2027/2937)   
29-Apr-2015 10:23:20 Checking out files:  70% (2056/2937)   
29-Apr-2015 10:23:20 Checking out files:  71% (2086/2937)   
29-Apr-2015 10:23:20 Checking out files:  72% (2115/2937)   
29-Apr-2015 10:23:20 Checking out files:  73% (2145/2937)   
29-Apr-2015 10:23:20 Checking out files:  74% (2174/2937)   
29-Apr-2015 10:23:20 Checking out files:  75% (2203/2937)   
29-Apr-2015 10:23:20 Checking out files:  76% (2233/2937)   
29-Apr-2015 10:23:20 Checking out files:  77% (2262/2937)   
29-Apr-2015 10:23:20 Checking out files:  78% (2291/2937)   
29-Apr-2015 10:23:20 Checking out files:  79% (2321/2937)   
29-Apr-2015 10:23:21 Checking out files:  80% (2350/2937)   
29-Apr-2015 10:23:21 Checking out files:  81% (2379/2937)   
29-Apr-2015 10:23:21 Checking out files:  82% (2409/2937)   
29-Apr-2015 10:23:21 Checking out files:  83% (2438/2937)   
29-Apr-2015 10:23:21 Checking out files:  84% (2468/2937)   
29-Apr-2015 10:23:21 Checking out files:  85% (2497/2937)   
29-Apr-2015 10:23:21 Checking out files:  85% (2500/2937)   
29-Apr-2015 10:23:21 Checking out files:  86% (2526/2937)   
29-Apr-2015 10:23:22 Checking out files:  87% (2556/2937)   
29-Apr-2015 10:23:22 Checking out files:  88% (2585/2937)   
29-Apr-2015 10:23:22 Checking out files:  89% (2614/2937)   
29-Apr-2015 10:23:22 Checking out files:  89% (2639/2937)   
29-Apr-2015 10:23:22 Checking out files:  90% (2644/2937)   
29-Apr-2015 10:23:22 Checking out files:  91% (2673/2937)   
29-Apr-2015 10:23:22 Checking out files:  92% (2703/2937)   
29-Apr-2015 10:23:22 Checking out files:  93% (2732/2937)   
29-Apr-2015 10:23:22 Checking out files:  94% (2761/2937)   
29-Apr-2015 10:23:22 Checking out files:  95% (2791/2937)   
29-Apr-2015 10:23:22 Checking out files:  96% (2820/2937)   
29-Apr-2015 10:23:23 Checking out files:  97% (2849/2937)   
29-Apr-2015 10:23:23 Checking out files:  97% (2860/2937)   
29-Apr-2015 10:23:23 Checking out files:  98% (2879/2937)   
29-Apr-2015 10:23:24 Checking out files:  99% (2908/2937)   
29-Apr-2015 10:23:24 Checking out files: 100% (2937/2937)   
29-Apr-2015 10:23:24 Checking out files: 100% (2937/2937), done.
29-Apr-2015 10:23:24 Already on 'master'
29-Apr-2015 10:23:24 Updated source code to revision: 0b0c4e05e8f4518f20b5ff7ffd272304deeab48e
29-Apr-2015 10:23:24 Finished task 'Source Code Checkout' with result: Success
29-Apr-2015 10:23:24 Running pre-build action: VCS Version Collector
29-Apr-2015 10:23:24
Substituting variable: ${bamboo.repository.branch.name} with sead
29-Apr-2015 10:23:24
Substituting variable: ${bamboo.buildNumber} with 74
29-Apr-2015 10:23:24 Starting task 'Web App' of type 'com.atlassian.bamboo.plugins.ant:task.builder.ant'
29-Apr-2015 10:23:24
Beginning to execute external process for build 'MMDB - Medici 1 GWT - sead - default #74 (MMDB-MEDICI70-JOB1-74)'
... running command line:
/home/bamboo/apache-ant-1.9.4/bin/ant -Djava.io.tmpdir=/tmp/MMDB-MEDICI70-JOB1 bamboo -Dbamboo.version="sead#74"
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web
... using extra environment variables:
bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_05
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
JAVA_HOME=/home/bamboo/jdk1.7.0_60
bamboo_repository_18841602_previous_revision_number=0b0c4e05e8f4518f20b5ff7ffd272304deeab48e
bamboo_planRepository_type=git
bamboo_shortPlanName=sead
bamboo_capability_system_software_mongo=/usr/bin/mongo
bamboo_planKey=MMDB-MEDICI70
bamboo_repository_71958567_git_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web.git
bamboo_repository_git_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web.git
bamboo_planRepository_1_branchName=sead
bamboo_repository_18841602_git_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/cbi/cet.git
bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_repository_71958567_revision_number=1ce16f5a6ff38e4b31645db512d1845a02d49575
bamboo_shortPlanKey=MEDICI70
bamboo_shortJobKey=JOB1
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1
bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
bamboo_planRepository_1_branch=sead
bamboo_repository_revision_number=1ce16f5a6ff38e4b31645db512d1845a02d49575
bamboo_repository_18841602_name=cet
bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.2.1
bamboo_planRepository_2_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/cbi/cet.git
bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs
bamboo_planName=MMDB - Medici 1 GWT - sead
bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/MMDB-MEDICI70-JOB1-74
bamboo_capability_system_jdk_JDK_1_7_0_60=/home/bamboo/jdk1.7.0_60
bamboo_buildResultKey=MMDB-MEDICI70-JOB1-74
bamboo_planRepository_revision=1ce16f5a6ff38e4b31645db512d1845a02d49575
bamboo_repository_git_username=
bamboo_buildKey=MMDB-MEDICI70-JOB1
bamboo_repository_previous_revision_number=1ce16f5a6ff38e4b31645db512d1845a02d49575
bamboo_capability_system_git_executable=/usr/bin/git
bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1
bamboo_repository_18841602_revision_number=0b0c4e05e8f4518f20b5ff7ffd272304deeab48e
bamboo_repository_18841602_git_username=
bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node
bamboo_planRepository_2_previousRevision=0b0c4e05e8f4518f20b5ff7ffd272304deeab48e
bamboo_repository_71958567_previous_revision_number=1ce16f5a6ff38e4b31645db512d1845a02d49575
bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir
bamboo_buildPlanName=MMDB - Medici 1 GWT - sead - default
bamboo_repository_name=cet
bamboo_planRepository_2_revision=0b0c4e05e8f4518f20b5ff7ffd272304deeab48e
bamboo_repository_71958567_git_branch=sead
bamboo_repository_18841602_git_branch=master
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/MMDB-MEDICI70-JOB1-74
bamboo_planRepository_1_revision=1ce16f5a6ff38e4b31645db512d1845a02d49575
bamboo_repository_git_branch=sead
bamboo_planRepository_2_branch=master
bamboo_ManualBuildTriggerReason_userName=kooper
bamboo_planRepository_1_previousRevision=1ce16f5a6ff38e4b31645db512d1845a02d49575
bamboo_planRepository_1_type=git
bamboo_repository_18841602_branch_name=master
bamboo_repository_71958567_branch_name=sead
bamboo_repository_71958567_name=medici-gwt-web
bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt
bamboo_planRepository_1_name=medici-gwt-web
bamboo_planRepository_branch=sead
bamboo_planRepository_2_branchName=master
bamboo_planRepository_username=
bamboo_planRepository_branchName=sead
bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.7.0_60
bamboo_capability_system_os=linux
bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
bamboo_repository_71958567_git_username=
bamboo_shortJobName=default
bamboo_repository_branch_name=sead
bamboo_agentId=57573377
bamboo_planRepository_previousRevision=1ce16f5a6ff38e4b31645db512d1845a02d49575
bamboo_planRepository_1_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web.git
bamboo_planRepository_repositoryUrl=https://opensource.ncsa.illinois.edu/stash/scm/mmdb/medici-gwt-web.git
bamboo_planRepository_2_type=git
ANT_HOME=/home/bamboo/apache-ant-1.9.4
bamboo_dependenciesDisabled=false
bamboo_planRepository_2_name=cet
bamboo_planRepository_1_username=
bamboo_planRepository_2_username=
bamboo_planRepository_name=medici-gwt-web
bamboo_buildNumber=74
bamboo_capability_system_hostname=buildserver-2
bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs
bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl
bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4
bamboo_buildTimeStamp=2015-04-29T10:22:43.322-05:00
PATH=/home/bamboo/jdk1.7.0_60/bin:/home/bamboo/jdk1.7.0_60/bin:/home/bamboo/node-v0.10.28/bin:/usr/bin:/bin
29-Apr-2015 10:23:24 Buildfile: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/build.xml
29-Apr-2015 10:23:25
29-Apr-2015 10:23:25 cetbean:
29-Apr-2015 10:23:25     [mkdir] Created dir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
29-Apr-2015 10:23:25     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/build.xml:85: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds
29-Apr-2015 10:23:25     [javac] Compiling 65 source files to /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
29-Apr-2015 10:23:26     [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.5
29-Apr-2015 10:23:27     [javac] 1 warning
29-Apr-2015 10:23:27       [jar] Building jar: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/lib/cet-bean.jar
29-Apr-2015 10:23:28    [delete] Deleting directory /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
29-Apr-2015 10:23:28     [mkdir] Created dir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
29-Apr-2015 10:23:28     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/build.xml:100: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds
29-Apr-2015 10:23:28     [javac] Compiling 97 source files to /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
29-Apr-2015 10:23:28     [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.5
29-Apr-2015 10:23:28     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/SHAPasswordDigest.java:48: warning: BASE64Encoder is internal proprietary API and may be removed in a future release
29-Apr-2015 10:23:28     [javac] import sun.misc.BASE64Encoder;
29-Apr-2015 10:23:28     [javac]                ^
29-Apr-2015 10:23:29     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/TagEventBeanUtil.java:72: warning: [deprecation] encode(String) in URLEncoder has been deprecated
29-Apr-2015 10:23:29     [javac]         return Resource.uriRef("tag:cet.ncsa.uiuc.edu,2008:/tag#" + URLEncoder.encode(tag)); //$NON-NLS-1$
29-Apr-2015 10:23:29     [javac]                                                                               ^
29-Apr-2015 10:23:29     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/VisualizationBeanUtil.java:73: warning: [deprecation] clone(T,PersonBean) in TupeloBeanUtil has been deprecated
29-Apr-2015 10:23:29     [javac]     public VisualizationBean clone(VisualizationBean bean, PersonBean creator)
29-Apr-2015 10:23:29     [javac]                              ^
29-Apr-2015 10:23:29     [javac]   where T is a type-variable:
29-Apr-2015 10:23:29     [javac]     T extends CETBean declared in class TupeloBeanUtil
29-Apr-2015 10:23:29     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/VisualizationBeanUtil.java:83: warning: [deprecation] clone(ConfigurationBean,PersonBean) in ConfigurationBeanUtil has been deprecated
29-Apr-2015 10:23:29     [javac]             ConfigurationBean configuration = cbu.clone(bean.getConfiguration(), creator);
29-Apr-2015 10:23:29     [javac]                                                  ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/RBAC.java:442: warning: [deprecation] ADMIN_ROLE in MMDB has been deprecated
29-Apr-2015 10:23:30     [javac]             if (!t.getObject().equals(MMDB.ADMIN_ROLE) && !t.getObject().equals(MMDB.REGULAR_MEMBER_ROLE)) {
29-Apr-2015 10:23:30     [javac]                                           ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/RBAC.java:442: warning: [deprecation] REGULAR_MEMBER_ROLE in MMDB has been deprecated
29-Apr-2015 10:23:30     [javac]             if (!t.getObject().equals(MMDB.ADMIN_ROLE) && !t.getObject().equals(MMDB.REGULAR_MEMBER_ROLE)) {
29-Apr-2015 10:23:30     [javac]                                                                                     ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/RBAC.java:452: warning: [deprecation] ADMIN_ROLE in MMDB has been deprecated
29-Apr-2015 10:23:30     [javac]         createRole(MMDB.ADMIN_ROLE, "Administrator");
29-Apr-2015 10:23:30     [javac]                        ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/RBAC.java:453: warning: [deprecation] REGULAR_MEMBER_ROLE in MMDB has been deprecated
29-Apr-2015 10:23:30     [javac]         createRole(MMDB.REGULAR_MEMBER_ROLE, "Member");
29-Apr-2015 10:23:30     [javac]                        ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/SHAPasswordDigest.java:78: warning: BASE64Encoder is internal proprietary API and may be removed in a future release
29-Apr-2015 10:23:30     [javac]         BASE64Encoder encoder = new BASE64Encoder();
29-Apr-2015 10:23:30     [javac]         ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/rbac/SHAPasswordDigest.java:78: warning: BASE64Encoder is internal proprietary API and may be removed in a future release
29-Apr-2015 10:23:30     [javac]         BASE64Encoder encoder = new BASE64Encoder();
29-Apr-2015 10:23:30     [javac]                                     ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowStepDAO.java:28: warning: [deprecation] Rdf in Vocabulary has been deprecated
29-Apr-2015 10:23:30     [javac]         uf.addPattern(new Pattern("data", Vocabulary.Rdf.TYPE, Cyberintegrator.PARAMETER)); //$NON-NLS-1$
29-Apr-2015 10:23:30     [javac]                                                     ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowStepDAO.java:40: warning: [deprecation] Rdf in Vocabulary has been deprecated
29-Apr-2015 10:23:30     [javac]         uf.addPattern(new Pattern("data", Vocabulary.Rdf.TYPE, Cyberintegrator.PARAMETER)); //$NON-NLS-1$
29-Apr-2015 10:23:30     [javac]                                                     ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowStepDAO.java:58: warning: [deprecation] Rdf in Vocabulary has been deprecated
29-Apr-2015 10:23:30     [javac]         uf.addPattern(new Pattern("input", Vocabulary.Rdf.TYPE, Cyberintegrator.DATASET)); //$NON-NLS-1$
29-Apr-2015 10:23:30     [javac]                                                      ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowStepDAO.java:82: warning: [deprecation] Rdf in Vocabulary has been deprecated
29-Apr-2015 10:23:30     [javac]         uf.addPattern(new Pattern("output", Vocabulary.Rdf.TYPE, Cyberintegrator.DATASET)); //$NON-NLS-1$
29-Apr-2015 10:23:30     [javac]                                                       ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowToolDataDAO.java:26: warning: [deprecation] Rdf in Vocabulary has been deprecated
29-Apr-2015 10:23:30     [javac]         uf.addPattern(new Pattern("data", Vocabulary.Rdf.TYPE, Cyberintegrator.TOOL_DATA)); //$NON-NLS-1$
29-Apr-2015 10:23:30     [javac]                                                     ^
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/cet/edu.uiuc.ncsa.cet.bean.tupelo/src/main/java/edu/uiuc/ncsa/cet/bean/tupelo/workflow/dao/WorkflowToolDataDAO.java:41: warning: [deprecation] Rdf in Vocabulary has been deprecated
29-Apr-2015 10:23:30     [javac]         uf.addPattern(new Pattern("data", Vocabulary.Rdf.TYPE, Cyberintegrator.TOOL_DATA)); //$NON-NLS-1$
29-Apr-2015 10:23:30     [javac]                                                     ^
29-Apr-2015 10:23:30     [javac] 17 warnings
29-Apr-2015 10:23:30       [jar] Building jar: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/lib/cet-bean-tupelo.jar
29-Apr-2015 10:23:30    [delete] Deleting directory /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/beanclass
29-Apr-2015 10:23:30
29-Apr-2015 10:23:30 updateversion:
29-Apr-2015 10:23:30
29-Apr-2015 10:23:30 clean:
29-Apr-2015 10:23:30
29-Apr-2015 10:23:30 compile:
29-Apr-2015 10:23:30     [mkdir] Created dir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/classes
29-Apr-2015 10:23:30     [javac] /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/build.xml:126: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds
29-Apr-2015 10:23:30     [javac] Compiling 579 source files to /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/classes
29-Apr-2015 10:23:37     [javac] Note: Some input files use unchecked or unsafe operations.
29-Apr-2015 10:23:37     [javac] Note: Recompile with -Xlint:unchecked for details.
29-Apr-2015 10:23:37
29-Apr-2015 10:23:37 gwtc:
29-Apr-2015 10:23:38      [java] Compiling module edu.illinois.ncsa.mmdb.web.MMDB
29-Apr-2015 10:24:26      [java]    Compiling 6 permutations
29-Apr-2015 10:24:26      [java]       Compiling permutation 0...
29-Apr-2015 10:24:41      [java]       Compiling permutation 1...
29-Apr-2015 10:24:54      [java]       Compiling permutation 2...
29-Apr-2015 10:25:05      [java]       Compiling permutation 3...
29-Apr-2015 10:25:17      [java]       Compiling permutation 4...
29-Apr-2015 10:25:29      [java]       Compiling permutation 5...
29-Apr-2015 10:25:40      [java]    Compile of permutations succeeded
29-Apr-2015 10:25:42      [java] Linking into /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/mmdb
29-Apr-2015 10:25:42      [java]    Link succeeded
29-Apr-2015 10:25:42      [java]    Compilation succeeded -- 123.735s
29-Apr-2015 10:25:43      [java] Compiling module edu.illinois.ncsa.mmdb.web.Embed
29-Apr-2015 10:26:14      [java]    Compiling 6 permutations
29-Apr-2015 10:26:14      [java]       Compiling permutation 0...
29-Apr-2015 10:26:22      [java]       Compiling permutation 1...
29-Apr-2015 10:26:29      [java]       Compiling permutation 2...
29-Apr-2015 10:26:34      [java]       Compiling permutation 3...
29-Apr-2015 10:26:39      [java]       Compiling permutation 4...
29-Apr-2015 10:26:45      [java]       Compiling permutation 5...
29-Apr-2015 10:26:50      [java]    Compile of permutations succeeded
29-Apr-2015 10:26:51      [java] Linking into /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/embed
29-Apr-2015 10:26:51      [java]    Link succeeded
29-Apr-2015 10:26:51      [java]    Compilation succeeded -- 67.432s
29-Apr-2015 10:26:51
29-Apr-2015 10:26:51 resources:
29-Apr-2015 10:26:51      [copy] Copying 6 files to /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/classes
29-Apr-2015 10:26:51      [copy] Copying 1 file to /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/war/WEB-INF/classes
29-Apr-2015 10:26:51
29-Apr-2015 10:26:51 war:
29-Apr-2015 10:26:51       [zip] Building zip: /home/bamboo/bamboo-agent-home/xml-data/build-dir/MMDB-MEDICI70-JOB1/mmdb-gwt/edu.illinois.ncsa.mmdb.web/medici.war
29-Apr-2015 10:26:58
29-Apr-2015 10:26:58 bamboo:
29-Apr-2015 10:26:58
29-Apr-2015 10:26:58 BUILD SUCCESSFUL
29-Apr-2015 10:26:58 Total time: 3 minutes 33 seconds
29-Apr-2015 10:26:58 Finished task 'Web App' with result: Success
29-Apr-2015 10:26:58 Running post build plugin 'Artifact Copier'
29-Apr-2015 10:26:58 Publishing an artifact: medici.war
29-Apr-2015 10:26:58 Finished publishing of artifact Job artifact: [medici.war], pattern: [medici.war] anchored at: [mmdb-gwt/edu.illinois.ncsa.mmdb.web] in 0s
29-Apr-2015 10:26:58 Running post build plugin 'npm Cache Cleanup'
29-Apr-2015 10:26:58 Running post build plugin 'NCover Results Collector'
29-Apr-2015 10:26:58 Running post build plugin 'Clover Results Collector'
29-Apr-2015 10:26:58 Running post build plugin 'Docker Container Cleanup'
29-Apr-2015 10:26:58 Finalising the build...
29-Apr-2015 10:26:58 Stopping timer.
29-Apr-2015 10:26:58 Build MMDB-MEDICI70-JOB1-74 completed.
29-Apr-2015 10:26:58 Running on server: post build plugin 'Clover Delta Calculator'
29-Apr-2015 10:26:58 Running on server: post build plugin 'Build Hanging Detection Configuration'
29-Apr-2015 10:26:58 Running on server: post build plugin 'NCover Results Collector'
29-Apr-2015 10:26:58 Running on server: post build plugin 'Maven Dependencies Postprocessor'
29-Apr-2015 10:26:58 All post build plugins have finished
29-Apr-2015 10:26:58 Generating build results summary...
29-Apr-2015 10:26:58 Saving build results to disk...
29-Apr-2015 10:26:59 Indexing build results...
29-Apr-2015 10:26:59 Finished building MMDB-MEDICI70-JOB1-74.