WhoMonday - PlannedFriday - Accomplished
Brock Angelo 
  • Finished the feature for downloading files in a dataset as a zip.
Edgar F. Black
  • MSC
    • AJT Paper 1st draft is ready for comments.
    • Work on refinements to accuracy and usability of Web interface (CRI-91)
  • MSC
    • Accuracy and usability of Web interface was checked. No errors were found.
    • At the request of the researchers, the plot function of the Hidden Markov Model program was modified. The y-axis plot for the C-Peptide variable now start from zero always.
    • New plots reflecting the previous will be produced next week
Rob Kooper
  • ISDA
    • catchup
  • Seagrant
    • meeting
  • SEAD
    • clowder / catchup
  • PEcAn
    • qsub / catchup
  • catchup on email
  • great lakes meeting
  • PecAn
    • small issues fixed
Jong Lee
  • NIST-CORE Tutorial
  • NIST-CORE Tutorial
Rui Liu
  • BD. Docker elasticity design and starting implementation.
  • Earthcube. Work with Luigi on JSON-LD or other tasks needed by the team.
  • BD. Debugged test failures on dap-dev. Created POL-162 (high CPU), POL-163 (stuck, deadlock), POL-164 (special chars in file names not handled). Came up and applied fixes/workarounds for POL-162 and POL-163, significantly reduced CPU usage and number of network connections, and increased the robustness of polyglot, checked in changes.
  • Earthcube: had a project meeting. Updated BMI again for Peishi. Created subtasks for the production machine set-up task.
Kenton McHenry
  • Reorg stuff
    • ICI wiki space
    • Software services we provide
    • Weekly updates
  • HR stuff
    • ARPAE hire
  • Information loss setup in BD
  • Review HMM paper
  • If time take on sprint tasks of my own for BD
  • ICI wiki space
  • Compiled SSA services
  • Compiled SSA updates
  • HR Stuff
  • Reviewed Data Division draft
  • BD Sprint
Luigi Marini
  • Great Lakes Monitoring phase 3 kickoff meeting
  • BD single sign-on
  • SEAD staging area sprint 2
  • Clowder documentation
  • XSEDE VAT multimedia search bug and speed ups
  • XSEDE Roadmap review
  • IMLCZO slides for NSF review
  • GLM phase 3 meeting went well. We'll probably start Nov. 1st
  • Found some oauth2 and openid open source providers for BD single sign-on
  • All pull request for SEAD stage area sprint 2. Waiting on Luigi Marini to finish his task... (sad)
  • Potential fix for VAT multimedia search bug pushed to a branch. Passed to Sandeep Puthanveetil Satheesan to figure out if this really fixes it.
  • Still need to work on XSEDE roadmap review and IMLCZO slides for NSF review
Christopher Navarro
  • NIST/Ergo - prep for user/developer workshop in Greece, review pull requests, bug fixing
  • CyberSEES - look at clowder users API, talk with Rob next week to discuss reviving work to use Clowder users in DataWolf
  • BrownDog - tech meeting
  • NIST/Ergo - travel plans made for Greece, reviewed/discussed implementation of restoration curves, fixed a bug in the standard normal distribution solver, reviewed slides for portland training
  • BrownDog - tech meeting, started looking into POL-29, setup local polyglot on a vm, setup datawolf for testing, discussed HPC work for pyClowder with Jong and Sandeep.
  • Updated local Clowder source and installed required services (mongo/rabbitmq), will discuss sharing users among DataWolf/Clowder/etc this Tuesday with Rob Kooper & Luigi Marini
Michal Ondrejcek
  1. vacation
  2. Working on the documentation
  1. DONE
Smruti Padhy
  • BD
    • Short paper version of IEEE Big Data paper
    • Landsat extractor
  • SDN
    • SDN QoS module implementation
    • Impact of flow/network topology statistics on flow constraint graphs
  • BD
    • Prepared the Short paper version of IEEE Big Data paper
    • Finished with CSV parser for earth-sun distance table
    • started with landsat 7 metadata file parser
    • created JIRA tasks for Tools Levels, also discussed with Inna and Marcus on the tasks.
  • SDN
    • Started the SDN QoS module implementation - Port, Queue data structure
  • Wednesday Half-Day off


Sandeep Puthanveetil Satheesan
  • BD-741: Elaborate the design based on Monday's meeting, document questions and ideas, update Power Point slides
  • Decomposing Bodies:
    • Start going through existing extractors
    • Download the data and go through the files. Get initial thoughts on possible challenges ahead
  • VAT:
    • Get back to development of intelligent switching between batch and dedicated processing
  • Working on elaborating the design of HPC pyClowder. Will present the updates during Monday meeting.
  • Working on the VAT bug (clowder running out of memory when using the multimedia search) along with Luigi.
  • Decomposing Bodies Project
    • Made sure that we have access to data
    • Started going through the existing extractors
Eugene Roeder  
Inna Zharnitsky
  • Address JIRA tasks BD-606 and BD-725
  • Check on using uploaded jar files in Nexus for Census Segmenter.
  • Tool Catalog BD-606 - talked to Rui and Kenton, not a bug.
  • BD-725 - DOI has only link to the location of the resource, does not necessarily have title/author/publisher info. Need to look some more into it to see if may be there is still a way to get title/author info from DOI.
  • Census Segmenter - Spent time to use jar files from Nexus for MatrixUtilities and ImageUtilities. New files could not be found (eclipse problem? or maven problem?) had to manually remove .m2/repository/edu, then it would be re-created by maven and the correct jars would be found. Finally, the correct jars are in Nexus and all works.
Marcus Slavenas
  • GLTG
    • aggregate raw greon files into a single monthly/data_type file
  • IARP
    • continue battle uploading more than 15,000 file to clowder
  • BD
    • GI use case: add processing of csv file for green index extractor
  • GLTG
    • refactor raw file parser - reorganize collection/dataset structure, aggregate raw files into monthly file
    • run raw file parser on every 30 minute cron
  • IARP
    • refactor image fetcher for spaces branch and test - still having issues with time increase
    • begin looking into timing in addDataset in MongoDbCollectionService
  • BD
    • meet Bill Sullivan and Dr.Chang
      • intend to write proposal for segmenting Taipai riverfront images according to trees, water, grass etc,
    • created badge for file level and added to browse files entry (not pushed yet, waiting for discussion) 
Indira Gutierrez Polo

SEAD

  • Start working on calling the matchmaker
  • Update ORE Map

CyberSEES

  • Backbone/Marionnette tutorials

SEAD

  • Update ORE Map
  • Some progress in calling Matchmaker
  • Update broken create buttons. Add create button for dataset and collection in space page. Modified create dataset and collection to take optional space and select by default

CyberSEES

  • Backbone and Marionnette tutorials
  • Started looking through Brian code to make updates and make it standalone
Jason Votava
  • NCSA colloquium - Next steps
  • SC15 - Meet with presenters, hammer out details
  • Professional Development - Submit trip report
  • BD - Assign new sprint tasks
  • NIST - Review user survey, get travel expenses settled
  • MWRD - Present tech install plan to Rob and Jong
  • GLTG - Bump use case topic to scientists
  • Recommendations for colloquium have been submitted
  • SC15 demo schedule approved. Dress rehearsals first week of Nov.
  • BD - Bringing it all Together tasks under review. Need to weed out duplicates from backlog.
  • NIST - Submitted suggestions for survey. Travel expense issue handled, following up with Beth.
  • MWRD - Tech xfer/tutorial scheduled. Oct 20th.
  • GLTG - Use case in progress. Will touch base with Michael/Ted/Bill early next week for update.
  • Trip Report - On list for today.
Winston Jansz 

 

Yong Wook Kim
  • Write Network Discretization code
  • Testing NIST-CORE for Portland user training
  • NIST User training in Portland
  • Wrote a code for network discretization analysis
Omar Elabd
  • Finalize Roadway Restoration
  • Software Requirements Survey
  • Setup Laptop
  • Geotools Testing
  • Finished Roadway Restoration Analysis
  • Started Roadway Restoration Refactoring + Views
  • Finished Software Requirements Survey
  • Tech Support for NIST Training
  • Video Clip of Roadways Analysis
Yan Zhao
  • MSC
    • CRI-99, 100
  • SEAD
    • help to finish CTAS-166
  • MSC
    • trouble-shoot with Edgar.
    • try ImageJ, cellprofile, bio-format lib to load svs file
  • SEAD
    • CTAS-166 & most of staging area 3 assigned to me