2016-02-22 Stand Up Meeting notes

• NIST-CORE

• NIST-CORE

• Earthcube: Project All-Hands Meeting. Monday, Tuesday.
• BD: XSEDE16 paper sections, story board tasks.

• Earthcube: Project All-Hands Meeting. Monday–Tuesday.
• BD: started writing XSEDE16 paper sections; sprint planning meetings; discussion with Inna regarding TC/EM testing and her another Sprint task. Debugged 3 dts/dap test failures that occurred on Monday and Thursday; created BD-966 for a Polyglot server bug.

• BD sprint
• NDSC5 demos/planning
• LSST staffing
• BD2K engagement

• BD sprint development
• NDS project planning
• NDSC5 planning/invitations
• BD2K
• LSST Staffing

• BD - setup datawolf VM pointed at dts-dev, discuss what's required to point API gateway at datawolf endpoint
• CyberSEES - prepare for next weeks hackathon
• NIST - code review, finish tornado building damage analysis

• CyberSEES - meetings to prepare for hackathon, reviewed Bardia's performance report code and got it running in DataWolf. Got IUHM model compiled on linux and tested with sample data
• NIST - code review, meetings, requested information on tornado building damage from CSU - it requires some code reviews to finish to complete based on their reply, fixed bugs
• Other - answered Ergo questions

• Earthcube 2 day hall hands meeting
• SEAD planning and deployment
• Earthcube CSV annotation webapp
• BD sprints planning

1. SEAD - JIRA tasks CATS-390, CATS-416, CATS-456, CATS-404, CATS-387
2. MDF - NDS/2016-02-22+Kickoff

1. CATS-387 Done for the firstname and lastName, it does not propagate through socialsecure (Author in file, dataset, etc.).
   Almost done CATS-416, started CATS-390
2. see NDS/2016-02-22+Kickoff

• BD 
  • Sprint - wiki, how-to-page
  • Experiment on Docker Elasticity Module
  • XSEDE follow up
  • Green Lidar follow up
• SDN
  • Review/Editing, final submission of the paper to the Journal IEEE TDSC
  • Experiment with IFB
• LSST Staffing
• Monday afternoon off

• BD
  • Learnt how to use Docker for converter and extractor. Tried out simple examples.
  • Sprint - Converter README page done
  • Detailed XSEDE Paper organization with timelines and follow up with each member
  • Discussion on Infrared Lidar tool with Kunxuan
• SDN
  • No comments from Sibin/Rakesh
  • Started experiments with IFB - study different tc queueing discipline and wrote a script to test HTB using netperf/iperf
• LSST staffing
• Monday afternoon off

• BD
  • Write XSEDE paper sections
  • Work on Tools monitor page
  • Data Transformation Service 1 Sprint tasks
  • Submit Jet stream proposal
• DEBOD
  • Try handwritten digit recognition
• VAT
  • CATS-419 - Getting issue details... STATUS
  • Draft work plan till 06/30
• XSEDE
  • Review XSEDE adaptive proposal

• BD
  • Wrote XSEDE paper sections
    • Worked on pyClowder section
    • Created architecture diagram for HPC extractor - pyClowder HPC module
  • Worked on Data Transformation Service 1 Sprint tasks
    • Created dockerfile for word count extractor
    • Got familiarized with Docker
• DEBOD
  
  • Tried KNNDigitPython, SimpleDigitPython, HandwrittenNumbers (on going)
• XSEDE
  • Reviewed and submitted XSEDE adaptive proposal

• BD Tool Catalog - improve view templates to deploy tools.
• Docker - start learning

• Tool Catalog views: require user input to add/stop an extractor. Created a page with deploy form. Added rabbitmq plugin to handle passing and receiving messages from rabbitmq. Tested that I can start and stop extractors in clowder-dev.
• Docker - installed and worked through Get Started in the tutorial.

• BD
  • finish portion of clowder analysis web app for Tum's use case
    • buttons to zip and download all files with green index in a defined range
• IARP
  • continue extractor development
• GLTG
  • review report

• BD/IARP
  • php clowder data analysis app/ c++ libraries
    • Finally got downloading file from clowder to work
      • thought for a long time that I was coding the requests wrong and spent a long time trying to debug my code 
      • but when I realized I was getting the same error in c++ and php, found it was a clowder bug (clowder required user-agent header value), which rob fixed
• BD
  • docker tutorial for mac
• GLTG
  • read phase 3 outline

CyberSEES

• Prepare for next week hackathon

SEAD

• Refactor delete buttons functionality.

CyberSEES

• Prepare for next week hackathon

SEAD

• Fix new updates to Ore-map, matchmaker and post submission to repository
• Created Migration Scripts for notes to description in files and folders
• Added pagination to child collections in collection page using ajax and updated the datasets one.

• Finish tornado EPN damage analysis

• Worked on tornado EPN damage analysis.
• Fixed ERGO-364 showing unique values in scenario legend
• ERGO-380 adding getNode method in Graph.java
• Fixed ERGO-378 Utility Network Builder error

• NGA Models
• Roadway PGD

• Task Review
• NGA Models
  • Updated to 2014
  • Added Standard Deviation
  • Calculations for Rx, Ry0, Dpp

Clowder

• metadata uploaded w files should be UserAgent instead of Extractor
• way to upload metadata "on behalf of" someone else
• review OpenLayers geojson metadata mapping

BETYdb

• look at insertion API

• pull requests for UserAgent metadata on upload, openlayers mapping of geojson, context display on metadata
• RStudio tool added for clowder tool launcher - overhaul launcher API code to make additional tools easier to add. deleting a tool session now deletes container on server.
• TERRA - initial writeup of Clowder documentation & Danforth overview

Pecan

• 353 -Add more information to map pin details
• 482 - Add new site from within Pecan Google Map interface

Brown Dog

• Start sprint effort
  • BD-970 - Start working on setup for Brown Dog (DAP, DTS) front end
• Need to finalize docker image for BIL and HDL5 format

GLM

• Organize and close out tasks for 2.2 release
• Put flow together for parser scripts collaboration

Pecan

• 353 -Add more information to map pin details
  
  

Brown Dog

• Start sprint effort
  • BD-970 - Start working on setup for Brown Dog (DAP, DTS) front end

GLM

• Organize and close out tasks for 2.2 release
• Put flow together for parser scripts collaboration
• Deployed welcome homepage change to development environment

• SEAD
  • add folder to curation object
• MSC
  • experiment part for glomerulus detection report

• SEAD
  • add folder to curation object
• MSC
  • experiment part for glomerulus detection report