NDS Labs Services

Research Data Management Tools

Name	Description	In Labs Workbench?	Notes
browndog	Data transformation service, http://browndog.ncsa.illinois.edu/
ckan	Data portal, http://ckan.org/
clowder	Data hosting/sharing, https://clowder.ncsa.illinois.edu/
dataone	Repository, https://www.dataone.org/
dataverse	Repository, http://dataverse.org/
dspace	Repository, http://www.dspace.org/
fedora	Repository, http://fedorarepository.org/
girder	Data hosting/sharing, http://girder.readthedocs.org/en/latest/index.html
globus	Data transfer/publishing, https://www.globus.org/
hubzero	Tool sharing, https://hubzero.org/
irods	Federated Archive, http://irods.org/
omeka	Repository, https://omeka.org/
scidrive	Data hosting/sharing, http://scidrive.org/
zenodo	Data & software publication, http://zenodo.org/

Name	Description	In Labs Workbench?	Notes
cyverse	Data storage/analysis, http://www.iplantcollaborative.org/
galaxy	Data intensive research platform, https://galaxyproject.org/
jupyter	Electronic notebook, http://jupyter.org/
rstudio	IDE for R, https://www.rstudio.com/
tworavens	Statistical tools, http://datascience.iq.harvard.edu/about-tworavens
weka	Machine learning, http://www.cs.waikato.ac.nz/ml/weka/
yt	Data visualization, http://yt-project.org/

Name	Description	Notes
cloud9	https://github.com/c9	License?
eclipse	https://eclipse.org/
eclipse che	http://www.eclipse.org/che/
idea	https://www.jetbrains.com/idea/
pycharms	https://www.jetbrains.com/pycharm/
vscode	https://code.visualstudio.com/

Name	Description	In Labs Workbench?	Notes
apache	Web server, https://httpd.apache.org/
elasticsearch	Text indexing, https://www.elastic.co/cloud/signup
gitlab	Source code management, https://about.gitlab.com/
glassfish	Java application server, https://glassfish.java.net/
kallithea	Source code management, https://kallithea-scm.org/
mediagoblin	Media publishing, http://mediagoblin.org/
mediawiki	Wiki, https://www.mediawiki.org/wiki/MediaWiki
moinmoin	Wiki, https://moinmo.in/
mongodb	NoSQL database, https://www.mongodb.org/
mysql	Database, https://www.mysql.com/
nginx	Web server, http://nginx.org/en/
owncloud	Cloud storage, https://owncloud.org/
postgres	Database, http://www.postgresql.org/
rabbitmq	Distributed messaging bus, http://www.rabbitmq.com/
solr	Search, http://lucene.apache.org/solr/
xwiki	Wiki, http://www.xwiki.org/xwiki/bin/view/Main/WebHome

Previous version can be found here.