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List of publications related to Clowder.

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Digital Preservation

  • S. Padhy, J. Alameda, R. Kooper, R. Liu, S. P. Satheesan, I. Zharnitsky, G. Jansen, M. Dietze, P. Kumar, B. Minsker, C. Navarro, M. Slavenas, W. Sullivan, and K. McHenry, “An Architecture for Automatic Deployment of Brown Dog Services At Scale into Diverse Computing Infrastructures,” in XSEDE, 2016.
  • S. Padhy, L. Diesendruck, R. Kooper, R. Liu, L. Marini, C. Navarro, M. Slavenas, I. Zharnitsky, M. Dietze, P. Kumar, B. Minsker, J. Lee, and K. McHenry, “Autocuration Cyberinfrastrucutre for Scientific Discovery and Preservation,” in IEEE eScience, 2015.
  • J. Myers, M. Hedstrom, D. Akmon, S. Payette, B. A. Plale, I. Kouper, S. McCaulay, R. McDonald, I. Suriarachchi, A. Varadharaju, P. Kumar, M. Elag, J. Lee, R. Kooper and L. Marini, “Towards Sustainable Curation and Preservation: The SEAD Project's Data Services Approach,” in 2015 IEEE 11th International Conference on e-Science, 2015.
  • S. Padhy, G. Jansen, J. Alameda, E. Black, L. Diesendruck, M. Dietze, P. Kumar, R. Kooper, J. Lee, R. Liu, R. Marciano, L. Marini, D. Mattson, B. Minsker, C. Navarro, M. Slavenas, W. Sullivan, J. Votava, and K. McHenry, “Brown Dog: Leveraging Everything Towards Autocuration,” in IEEE Big Data, 2015.
  • K. McHenry, J. Lee, M. Dietze, P. Kumar, B. Minsker, R. Marciano, L. Marini, R. Kooper, and D. Mattson, “DIBBs Brown Dog, PaaS for SaaS for PaaS,” in XSEDE Reproducibility Workshop, 2014.
  • L.Marini, R.Kooper, J.Futrelle, J.Plutchak, A.Craig, T.McLaren, and J. Myers, “Medici: A scalable multimedia environment for research,” in The Microsoft e-Science Workshop, 2010.

Geoscience

  • M. Elag, P. Kumar, L. Marini, J. Myers, M. Hedstrom, and B. Plale, “Identification and characterization of information-networks in long-tail data collections,” Environmental Modelling & Software, 2017.

Material Science

  • P. Nguyen, S. Konstanty, T. Nicholson, T. O’Brien, A. Schwartz-Duval, T. Spila, K. Nahrstedt, R. Campbell, I. Gupta, M. Chan, K. McHenry, and N. Paquin, "4CeeD: Real-time Acquisition and Analysis Framework for Materials-related Cyber-Physical Environments," in17th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing, 2017.

Medicine

  • Y. Zhao, E. Black, L. Marini, K. McHenry, N. Kenyon, R. Patil, A. Kajdacsy-Balla, and A. Bartholomew, "Automatic Glomerulus Extraction in Whole Slide Images Towards Computer Aided Diagnosis," 2016 IEEE 12th International Conference on e-Science (e-Science), 2016.
  • SL. PadhyMarini, JA. AlamedaVaidya, RN. KooperTenczar, RN. LiuKenyon, SA. PBartholomew, D. SatheesanSalomon, I. Zharnitsky, G. Jansen, M. Dietze, P. Kumar, B. Minsker, C. Navarro, M. Slavenas, W. Sullivan, and K. McHenry, “An Architecture for Automatic Deployment of Brown Dog Services At Scale into Diverse Computing Infrastructures,” in XSEDE, 2016.
    et al., "Extending the Medici Data Management Service for Medical Research Involving Distributed Teams," IEEE eScience, 2013.

Social Science

  • M. Poole, N. Lambert, S. Satheesan, A. Das, A. Yahja, and M. Hasegawa-Johnson, "GroupScope: A Framework and Tools for Large Scale Study of Social Processes," in International Conference on Computational Social Science, 2015.

Cultural Heritage & Arts

  • P. Rodriguez, S. Puthanveetil Satheesan, J. Will, E. Wuerffel, and A. Craig, “Extracting, Assimilating, and Sharing the Results of Image Analysis on the FSA/OWI Photography Collection,” to be presented at PEARC, 2017.
  • A. Langmead, P. Rodriguez, S. Puthanveetil Satheesan, and A. Craig, “Extracting Meaningful Data from Decomposing Bodies,” to be presented at PEARC, 2017.
  • C. Sophocleous, L. Marini, R. Georgiou, M. Elfarargy, and K. McHenry, “Medici 2: A Scalable Content Management System for Cultural Heritage Datasets,” in Code4Lib, 2017. http://journal.code4lib.org/articles/12317
  • M. Slavenas, E. Wuerffel, P. Rodriguez, J. Will, and A. Craig, “Image Analysis and Infrastructure Support for Mining the Farm Security Administration – Office of War Information Photography Collection,” in XSEDE, 2016
  • M. Slavenas, E. Wuerffel, P. Rodriguez, J. Will, and A. Craig, “Image Analysis and Infrastructure Support for Mining the Farm Security Administration – Office of War Information Photography Collection,” in XSEDE, 2016.
  • S. Padhy, L. Diesendruck, R. Kooper, R. Liu, L. Marini, C. Navarro, M. Slavenas, I. Zharnitsky, M. Dietze, P. Kumar, B. Minsker, J. Lee, and K. McHenry, “Autocuration Cyberinfrastrucutre for Scientific Discovery and Preservation,” in IEEE eScience, 2015.
  • J. Myers, M. Hedstrom, D. Akmon, S. Payette, B. A. Plale, I. Kouper, S. McCaulay, R. McDonald, I. Suriarachchi, A. Varadharaju, P. Kumar, M. Elag, J. Lee, R. Kooper and L. Marini, “Towards Sustainable Curation and Preservation: The SEAD Project's Data Services Approach,” in 2015 IEEE 11th International Conference on e-ScienceV. Kuhn, A. Craig, M. Simeone, S. P. Satheesan, and L. Marini, “The VAT: Enhanced Video Analysis,” in XSEDE, 2015.
  • M. Poole, N. Lambert, S. Satheesan, A. Das, A. Yahja, and M. Hasegawa-Johnson, "GroupScope: A Framework and Tools for Large Scale Study of Social Processes," in International Conference on Computational Social Science, 2015.
  • , 2015.
  • V. Kuhn, M. Simeone, L. Marini, D. Bock, A. Craig, L. Diesendruck, and S. P. Satheesan, “MOVIE: Large Scale Automated Analysis of MOVing ImagEs,” in XSEDE, 2014. http://dl.acm.org/citation.cfm?id=2616529L.Marini, R.Kooper, J.Futrelle, J.Plutchak, A.Craig, T.McLaren, and J. Myers, “Medici: A scalable multimedia environment for research,” in The Microsoft e-Science Workshop, 2010.