Who | Planned - Monday | Accomplished - Friday |
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| | PR In Review - design and implement SimpleExtractor in Pyclowder2.
- wordcount-simepleextractor
- meangrey-simpleextractor.
Done - update greenroute with feature to set step size in meter unit, discuss with students on the format of uploading test files.
- update greenroute on clowder dev.
- deploy clusterscale on dev swarm cluster with docker-compose file.
- Daily maintenance on Browndog.
|
| - Prep for Globus World
- Collaborate on TACC Cyberinfrastructure for Archives proposal.
- Attend Globus World
|
|
| - Incore
- Data browser and Fragility Browser fix bug + styling
- SMM
- change citation and email address in the app
- hide boolean function
- add MIME type when uploading files to s3 bucket and clowder
- design clowder interface in SMM
| - Incore
- Data browser and Fragility Browser fix bug + styling
- add transportation recovery model to pyincore analyses
- SMM
- change citation and email address in the app
- add MIME type when uploading files to s3 bucket and clowder
|
| - FarmDoc
- Review matlab code
- Create VMs for shared architecture with Cover Crop
- CoverCrop
- Code review
- Help updateworkflow with template parsing tool
- IN-Core
- General
- Finish zenodo entry and initial password reset page for datawolf, create release plan for DataWolf 4.3
| |
| NDS TERRA
WholeTale - Godaddy API integration
- Integration tests
| NDS TERRA WholeTale |
Gowtham Naraharisetty | - Start converting Water Damage Analysis to pyincore
- Create initial farmdoc web application FD-15
- Migrate postgres database for farmdoc FD-6
| - Setup local and ran building damage. Made progress on converting Water Facility Damage.
- Made progress on farmdoc webapp setup. Setup flask and folder structure.
- Completed database migration for farmdoc
|
| | |
| InCore - Help in preparation for Demo
GLM - Start working on visualizations for Fish Data
SMU - Follow up on extractors not running after update
| InCore - Wrapped up the development of JupyterLab_Incore. Updates in the data viewer, added a creator filter, previews for xml and text files, added a dataset metadata component
- GLM
- Updates to pull request on filtering by date on the trends by region detail page
- Started 2.6.0 release
- Review Pull Requests
|
| - KnowEng
- Add logic for supporting mixed data type in phenotype expander
- SAP:
- Add column/row duplication check
- Add gene order check
- Add remove NA index to signature data and user spreadsheet data
- Update README
- Explore solution for jupyterhub user data backup in AWS
- InCore
- Finish adding new multiprocessing library to buildingdamage.py
- Benchmark testing on parallelization of buildingdamage.py
| - KnowEng
- Added logic for supporting mixed data type in phenotype expander
- SAP:
- Added column/row duplication check
- Added gene order check
- Added remove NA index to signature data and user spreadsheet data
- Added related unit tests
- Updated README
- Looking into solution for jupyterhub user data backup in AWS
- InCore
- Finished adding new multiprocessing library to buildingdamage.py
- Moved mapping_id from constructor to class function
- Started benchmarking testing on parallelization of buildingdamage.py, need clarification on incore2-test machine resource.
|
| | |
| | |
| - BD
- Clowder 1.4 release and 2.0 development
- Report section
- Industry
- Documentation and planning
- GLM, GLTG, IMLCZO Pull requests and release
- HR
| - Last minute meetings and HR.
- Cyprus Clowder instance support.
- Clowder landing page.
|
| - gltg
- script for iepa sensor name
- usgs parser deployed
- release?
- iepa -review comments
- vbd
- changes to app for model year selection
| - gltg
- iepa -review comments
- usgs parsers deployed
- updated iepa sensors on dev
- vbd
- fix graphs for new 2017 data
- created data endpoints for dates, weather, and forecaste
|
| | |
| - vacation We-Fri
- MDF
- Farmdoc
- finish
FD-13
-
Getting issue details...
STATUS
, start
FD-14
-
Getting issue details...
STATUS
| - done
- MDF
- Farmdoc
- initial PR before departure
|
| - NDS
- Attempt to reprovision the public Workbench beta (again)
- Planning next steps (upcoming demos, releases, etc)
- Crops in Silico
- Add the real models to UI to prepare for spring demo
- Update UI to support any new features/quirks in the real models
- Plan the spring demo of the UI, write slides and a script
- Industry
- Get the proxy endpoint working
- Ask about next steps / backlog?
| - NDS
- Provisioning process is once again working, but I will not have cycles to perform the necessary user migration for another week or so
- Crops in Silico
- Added real models to the UI
- Added new editable fields on inport/outports: read_meth, write_meth
- Added new editable fields on edges: field_names, field_units
- Implemented submitting a new GitHub issue via Google Forms
- Industry
- Basic proxy is functioning, but it cannot yet handle large responses
|
| - GLTG
- Reviewer Comments
-
GEOD-1070
-
Getting issue details...
STATUS
-
GEOD-1076
-
Getting issue details...
STATUS
-
GLGVO-431
-
Getting issue details...
STATUS
- If time:
- IMLCZO
- Re-run Parsers for Flux Tower and Allerton non-Decagon
-
GEOD-1063
-
Getting issue details...
STATUS
-
IMLCZO-229
-
Getting issue details...
STATUS
-
IMLCZO-226
-
Getting issue details...
STATUS
- If time:
| - GLTG
- Reviewer Comments
-
GEOD-1070
-
Getting issue details...
STATUS
-
GEOD-1076
-
Getting issue details...
STATUS
-
GLGVO-427
-
Getting issue details...
STATUS
-
GLGVO-431
-
Getting issue details...
STATUS
- IMLCZO
- Re-ran Parsers for Flux Tower and Allerton non-Decagon
-
GEOD-1063
-
Getting issue details...
STATUS
-
IMLCZO-229
-
Getting issue details...
STATUS
-
IMLCZO-226
-
Getting issue details...
STATUS
|
| | |
| - KnowEnG demo for the Cancer Informatics Core
- Pycsw server set up
| |
| | |
| - BD
- Quarterly report
- Dev tasks
- CCROP
- Pull request reviews
- Dev tasks
- IARP
- JUDEL
- Image quality improvemt for Tesseract.
| |
| - GLTG - report for IEPA
- Brown Dog - f/u on quarterly report
- BD - flyer - learn new program
- HR tasks
- FarmDoc - spin up progress - f/u
- Make sure KISTI visiting scholar tasks are followed up on
- In-Core - demo demo
- Plans BD Exec Committee Meeting
- SSA PPT ....
- SMU contract f/u
- BD No Cost Extension F/U
| |
| | - Monday off
- BD
- MRI extractor, some problem with memory, not finish
- BD report
- GLM
- test the time for binning, seems a lot of work, maybe has no time to do that.
- CC
- fix private route with new router lib.
|
| - Update dataType in data serivce with new mapping
- Update jupyterlab mapping preparation
- Update jupyterlab docker
- Update extractors-geo to use pyclowder 2
| - Worked on updating pycsw extract to use pyclowder 2
- Tested pycsw clowder dockers
- Updated incore jupyterlab docker
- Updated incore kubernetes
|