2016-03-28 Stand Up Meeting notes

• PEcAn
  • Release 1.4.5.1, fix some configuration issues
  • Look at other small fixes needed
  • Fix database sync errors
• LSST
  • Learn condor
  • Learn current job launching system (ORCA)
  • Work on workflow system
• SEAD
  • Work on CATS-478 - Getting issue details... STATUS
  • work on CATS-482 - Getting issue details... STATUS
• TERRA
  • work on BETY servers
  • work on CATS-483 - Getting issue details... STATUS
  • look at work from Dora
  • look at code from Max

• PEcAn
  • Fix with Shawn on syncing database to BNL
• LSST
  • Work on workflow group
• SEAD
  • Finished SEAD-941 - Getting issue details... STATUS
  • Finished CATS-478 - Getting issue details... STATUS
• TERRA
  • All day meeting Thursday
  • Demo Max code

• NIST-CORE

• NIST-CORE
• HR: Resume review

• BD sprint: help Inna, Sandeep on tasks, BD-1016 (add dockerfiles to Polyglot repo).
• Earthcube 0.3 task – data model matching (ECGS-68).

• BD sprint:
  • Reviewed PR for tool-catalog #35, #36. Merged #35. Worked with Inna to clean up the TC db on browndog.ncsa of leftover tool interfaces, to solve the exceptions in "deploy interface" and other pages.
  • Helped Sandeep debug and solve the bd-converter-example error of "no such file" for the script. BD-999.
  • BD-1016: created PR.
• Earthcube:
  • Helped add Mostafa as admin on ecgs-dev.
  • Found a bug in Clowder and created CATS-482 (super admin can not add user to a role in the default space).

• BD sprint progress, Polyglot refactoring
• NDSC5 planning/prep
• HR: LSST, BD2K

• BD sprint follow ups
• NDSC5 Planning/prep
• HR: LSST, BD2K
• NCSA data storage solutions

• Vacation - March 28 - March 30th
• NIST - code review/tsunami dmg analysis
• BrownDog - sprint/bdfiddle

• NIST - created new water hazard plugin for defining common data types for Ergo's tsunami analysis and NIST-Core's.
• Other - answered Ergo questions

1. SEAD - JIRA tasks, finish  CATS-390 and CATS-404
2. MDF - NDS/2016-03-28+Kickoff
3. MWRD - where are we? Create tasks and start again.

1. pull requests CATS-338, CATS-390
2. MDF - NDS/2016-03-28+Kickoff
3. started d3 graphs, add cursor and numbers

• BD
  • R Library README and any modification required for bdfiddle
  • XSEDE paper - HPC extractor design section writing
  • Elasticity experiments for Docker
  • iPRES paper - Tools Catalog section and follow up
• SDN
  • Poster preparation for ABB research on SDN research activities
  • Run one experiment with two HTBs to observe bandwidth share
• Monday off

• BD
  • XSEDE paper - HPC extractor section writing and reviewing
  • Elasticity experiments with Docker implementations
  • iPRES paper - Reviewed the draft and started writing the TC section
  • bdfiddle review meeting
• SDN
  • Prepared poster to be presented to ABB research on SDN research activities
  • Run experiments with 2 HTBS-- did not see the bandwidth share effect. Again ran a few experiments and observed that priority kicks in when there is not enough bandwidth allocated initially.
• Monday off

• BD
  • BDFiddle development
• DEBOD
  • Detection of decimal points

• BD
  • Worked on BDFiddle improvements
• DEBOD
  • Worked on detecting decimal points in handwritten decimal numbers
  • Now getting better results than before

• Work on my Sprint issues

• Sprint tasks - done and pull requests created.

• GLTG
  • parsed illinois epa data (very rough parser, but worked)
• BD
  • matlab client
    • improved README
    • submitted pull request
  • cpp extractors
    • got uploading derived metadata to work
  • bdfiddle
    • edited header and footer
    • started functions for populating code snippets
• IARP
  • finished technical portions for xracc/xsede paper and submitted to Liz

SEAD:

• Fixing Aggregation Statistics for hierarchy.
• Bug with naming of Folders.
• Require one or more creators on curation object page.
• Test-Only flag as default

CyberSEES:

• Continue integrating Bardia's workflow to GiDesigner.

SEAD:

• Fixing Aggregation Statistics for hierarchy.
• Bug with naming of Folders.
• Require one or more creators on curation object page.
• Test-Only flag as default

CyberSEES:

• Continue integrating Bardia's workflow to GiDesigner.

• Work on Wildfire coding

• Coding for wildfire simulation
• Debugging ERGO-395
• Updated NIST-39

• Submit Pull Request for NGA
• Fix PGD issues
• Submit Pull Request for Roadway PGD
• Data Ontology Conversion

• NGA, Roadway Pull Requests
• Added Thesarus (Austrian Geological Survey, USGS, GEMET)
• Converted National Bridge Inventory

• submitted pull request for Arizona Gantry -> NCSA monitor pipeline (automated monitoring of globus transfers for processing in Clowder)
• TERRA meetings
• minor fixes to pull requests

• SEAD
  • SEAD-982
  • CATS-461
• MSC
  • method part for hemorrhage

• SEAD
  • SEAD-982
  • CATS-461
• MSC
  • all experiment for glomeruli locating & glomeruli segmentation i ready.
  • execute my old experiment got TLS – thinking about changing the feature vectors.