ID (Extractor Name from config file, same as queue name) | Programming Language | Software | OS | Assigned To | Link to repo | Who wrote or worked on the code |
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| DEPLOYED | | | | | | |
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| ncsa.image.ocr | Python | Tesseract | Linux | Rui | ocr | |
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ncsa.cv.faces | Python | OpenCV | Linux | Inna (may be?) | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/opencv | Liana |
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ncsa.cv.eyes | Python | OpenCV | Linux | Inna | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/opencv | Liana |
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ncsa.cv.closeups | Python | OpenCV | Linux | Inna | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/opencv | Liana |
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ncsa.cv.profiles | Python | OpenCV | Linux | Inna | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/opencv | Liana |
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ncsa.cellprofiler.fluorescentcomet | Python | pymedici  | Windows | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
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ncsa.cellprofiler.fly | Python | | Windows | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
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ncsa.cellprofiler.human | Python | | Windows | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
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ncsa.cellprofiler.silvercomet | Python | | Windows | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
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ncsa.cellprofiler.speckle | Python | | Windows | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
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ncsa.cellprofiler.trackobject | Python | | Windows | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
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ncsa.cellprofiler.tumor | Python | | Windows | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
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ncsa.cellprofiler.yeast | Python | | Windows | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/cellprofiler | Liana |
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ncsa.image.sphog | Python | Matlab, mnist-sphog | Linux | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/handwritten/HandwrittenNumbers | |
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| | | | | | |
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| ncsa.bisque.histogram (notes: disabled) | Python | | Linux | | | |
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| ncsa.bisque.metadata (notes: disabled) | Python | | Linux | | | |
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| census-section-segmentor | Java | | Linux | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/census | Liana, Inna |
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| ncsa.cv.river | Python | OpenCV (python), convert (from imagemagick), and Gdal | Linux | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/river | Liana |
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| ncsa.geo.shpExtractor | Python | gdal | Linux | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geo/browse | Jong Lee |
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| ncsa.geo.tiffExtractor | Python | gdal | Linux | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geo/browse | Jong Lee |
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ncsa.image.ponddetect | Python | Matlab | Linux | Marcus | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/feature_detection | Marcus, Ankit |
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| ncsa.image.humanpref | Python | Matlab | Linux | Marcus | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/humanpref | Marcus, Ankit |
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ncsa.xml.greenindexroute, ncsa.csv.greenindexroute | Python | OpenCV | Linux | Marcus | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-maps/browse/greenroute | Marcus |
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ncsa.image.knn_numerals | Python | OpenCV | Linux | Marcus | | Marcus |
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ncsa.audio.speech2text | Java | CMU Sphinx, ffmpeg, sox | Linux | Marcus | | Marcus |
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| ncsa.nlp.simplelanguage | Python | numpy | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SimpleLanguage | Liana |
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| ncsa.nlp.simplesummary | Python | Natural Language Toolkit (NLTK) for Python, NLTK Data or at least: nltk.corpus,nltk.stem.porter and nltk.tokenize.punkt. | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SimpleSummary | Liana |
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| ncsa.nlp.SNLPSentiment | Java | Stanford CoreNLP tool, java, maven | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SNLP/SNLPSentimentExtractor | Liana, Marcus(?) |
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| | | | | | | |
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| NOT DEPLOYED | | | | | | |
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| ncsa.image.digitpy (notes: not in the Wiki page) | Python | opencv | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/handwritten/SimpleDigitPython | |
|---|
| ncsa.cv.pdfimages (not in the wiki page) | | pdfimages, from poppler-utils | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/poppler | |
|---|
| ncsa.cv.caltech101 | Python | Matlab and VLFeat | 64-bit Mac OS | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-cv/browse/vlfeat | |
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| dbpedia | Python | Natural Language Toolkit (NLTK) and rdflib. | | Luigi Marini | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-dbpedia/browse | Luigi Marini |
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| digest | Python | | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-digest/browse | |
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| ncsa.image.geotiff | Python | GDAL, Cython, numpy,
pygeoprocessing,
pika,
requests | Linux | Rui | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-geotiff/browse | Rui, Mostafa Elag |
|---|
| ncsa.hpc | Python | | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-hpc/browse | |
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| LSVA | Java | | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-lsva/browse | |
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| LSVA integrated | | | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-lsva-integrated/browse | |
|---|
| ncsa.movieslice | Python | | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-movieslice/browse | Sandeep |
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| mri2mesh | Python | pymedici, subprocess, logging, os, numpy, shutil, zipfile | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-mri/browse/mri2mesh | Marcus |
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| msc-ChemCBCExtractor | Python | | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/ChemCBCExtractor | Yan |
|---|
| msc-IsletExtractor | Python | requests, pika, openpyxl, xlrd, pymongo | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/IsletExtractor | Yan |
|---|
| msc-MonitorExtractor | Python | requests, pika, openpyxl, xlrd, pymongo | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/MonitorExtractor | Yan |
|---|
| ncsa.msc.dailymonitor | Python | requests, pika, openpyxl, xlrd, pymongo | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/OldMonitorExtractor | Ashwini |
|---|
| msc-PhenotypeExtractor | Python | requests, pika, openpyxl, xlrd, pymongo | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-msc/browse/PhenotypeExtractor | Yan |
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| ncsa.nlp.SNLP | Java | Stanford CoreNLP tool, java, maven | | | https://opensource.ncsa.illinois.edu/bitbucket/projects/CATS/repos/extractors-nlp/browse/SNLP/SNLPExtractor | Liana |
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