Whether the analysis succeeds or fails, the following occurs:

99848 - [INFO] [ncsa.gis.types.Scenario]: sd doesn't need a ROI filter
99894 - [INFO] [ncsa.gis.managers.ScenarioManager]: Saving bd to /home/tolbert/NCSA/MAEViz/managers/scenario/bd.xml
99908 - [INFO] [ncsa.analysis.elf.tasks.AnalysisTask]: **** TIME: 11 seconds.
99929 - [ERROR] [ncsa.analysis.types.UseCase]: Script failed
java.lang.NullPointerException
at ncsa.tools.elf.embedded.container.EmbeddedElfContainer.cleanup(EmbeddedElfContainer.java:42)
at ncsa.tools.elf.embedded.container.EmbeddedElfContainer.wrappedStart(EmbeddedElfContainer.java:57)
at ncsa.tools.elf.core.types.ElfContainer.start(ElfContainer.java:73)
at ncsa.tools.elf.embedded.managers.EmbeddedExecutionManager.execute(EmbeddedExecutionManager.java:36)
at ncsa.analysis.elf.ElfScriptExecutable$1.run(ElfScriptExecutable.java:110)
at org.eclipse.core.internal.jobs.Worker.run(Worker.java:55)
100440 - [ERROR] [ncsa.gis.SchemaProvider]: ncsa.gis.exceptions.SchemaCreationException: Could not find schema regionOfInterest
102454 - [INFO] [ncsa.gis.managers.ScenarioManager]: Saving bd to /home/tolbert/NCSA/MAEViz/managers/scenario/bd.xml

It will also prevent other error messages from the analysis script to appear correctly.