A B C D E F G H I J K L M N O P Q R S T U V W X Y

A

absolutename - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.FileInformation

actionPerformed(ActionEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

The action listener used to handle menu events.

actionPerformed(ActionEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Handle action events from menus and buttons.

actionPerformed(ActionEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotMonitor

Action event listener.

actionPerformed(ActionEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotPanel

Handle action events.

actionPerformed(ActionEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

Handle action events.

actionPerformed(ActionEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

Handle action events.

add(SoftwareServerAuxiliary.Operation) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

Add an operation to this application.

add(SoftwareServerAuxiliary.Script) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

Add an operation to this application.

add(SoftwareServerAuxiliary.Subtask) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Add a subtask to the list.

add(String, String, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Create a new subtask for the given application and operation names.

add(String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Create a new subtask for the given application, operation, file, and format names.

add(SoftwareServerAuxiliary.Task) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Merge this task list with another.

add(SoftwareServerClient) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Add a software reuse client.

add(String, int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Add a software reuse client.

add(SoftwareServerClient) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Add a software reuse client.

add(String, int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Add a software reuse client.

add(SoftwareServerAuxiliary.Operation) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

Add an operation to this application.

add(SoftwareServerAuxiliary.Script) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

Add an operation to this application.

add(SoftwareServerAuxiliary.Subtask) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Add a subtask to the list.

add(String, String, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Create a new subtask for the given application and operation names.

add(String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Create a new subtask for the given application, operation, file, and format names.

add(SoftwareServerAuxiliary.Task) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Merge this task list with another.

addArgument(int) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add an argument to be typed in when executed.

addArgument(BufferedImage, int) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add an argument to be typed in when executed (note this versions enforces a required desktop!).

addClick(BufferedImage, int, int) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add a mouse click.

addCommand(String) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add a command to execute.

addConversion(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

This will add the conversion from input to output using the application for the conversion.

addConversion(String, String, String, double) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

This will add the conversion from input to output using the application for the conversion with the weight.

addConversion(int, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

This will add the conversion from input to output using the application for the conversion.

addConversion(int, String, String, String, double) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

This will add the conversion from input to output using the application for the conversion with the weight.

addConversion(Conversion2) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

This will add the conversion to the IOGraph.

addConversions(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Add all conversions found on the software server found at the host.

addConversions(String, int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Add all conversions found on the software server found at the host.

addConversions(SoftwareServerClient) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Add all conversions found on the software server.

addDesktop(BufferedImage) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add a desktop image to the script.

addDoubleClick(BufferedImage, int, int) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add a mouse double click.

addEdge(V, V, E) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Add an edge to the graph.

addEdge(V, V, E, Double) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Add an edge to the graph.

addEdgeOnce(V, V, E) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Add an edge to the graph only if it doesn't exist.

addGraph(IOGraph<V, E>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Merge another I/O-graph into this one.

addKey(char) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add characters as input from the keyboard.

addLine(String) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add a line to the script.

addNegativeArea(int[]) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add a negative area for the NEXT captured desktop image!

addParameter(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.Conversion2

addParameter(int, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

addPopupMenu(JMenuItem) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Add a new item to the popup menu.

addPositiveArea(int[]) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add a positive area for the NEXT captured desktop image!

address - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.RequestInformation

addScriptedOperations(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Add operation scripts within the given directory.

addScriptedOperations(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Add operation scripts within the given directory.

addScriptedOperations(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Add operation scripts within the given directory.

addServer(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Record the existence of a software server and the applications/tasks it provides.

addSubtasks(String, String, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Add a sequence of subtasks that will allow an application to go from the input to the output format.

addSubtasks(String, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Add a sequence of subtasks that will allow an application to go from the input to the output format.

addSubtasks(String, String, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Add a sequence of subtasks that will allow an application to go from the input to the output format.

addSubtasks(String, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Add a sequence of subtasks that will allow an application to go from the input to the output format.

addTarget(int[][]) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add a target image to the script.

addTargetClick(int[][], int, int, int, int) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add a target mouse click.

addText(String) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add text input from the keyboard.

addText(BufferedImage, String) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add text input from the keyboard (note this versions enforces a required desktop!).

addToLastLine(char) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Add a character to the last line of the script.

addVertex(V) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Add a vertex to the graph if not already present.

advanceLine(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

advances a string so its first word is flushed

advanceParam(FileWriter, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script a call to AdvanceParam which gets the AHK script to move on to the next param in args list (in runtime)

AHKScriptBuilder - Class in edu.illinois.ncsa.isda.softwareserver

AHKScriptBuilder() - Constructor for class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

alias - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

alias - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

alias - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

alias - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Alive() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to verify if the server is responding

Alive() - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

alive() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to verify if the server is responding

alive() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

appIcons(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Returns the requested icon file if available.

appIcons(String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

appIcons(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Returns the requested icon file if available.

appIcons(String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

application - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

application - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

application - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Subtask

application - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.TaskInfo

application - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Operation

application - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

application - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Subtask

application - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.TaskInfo

application_alias - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.RemoteTaskInfo

application_alias - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.RemoteTaskInfo

application_name - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.RemoteTaskInfo

application_name - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.RemoteTaskInfo

arrangePointsInRings(Vector<PolyglotAuxiliary.Point2D>, Vector<Boolean>, int, int, int, double) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Set vertex positions to form a circular graph.

B

bellmanFord(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Bellman Ford shortest path.

Benchmark - Class in edu.illinois.ncsa.isda.softwareserver

Benchmark for software servers.

Benchmark() - Constructor for class edu.illinois.ncsa.isda.softwareserver.Benchmark

busy() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to verify if the server is busy

busy() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

C

cache(int, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Cache the file data.

cache() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Cache all task input data if not already.

cache(int, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Cache the file data.

cache() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Cache all task input data if not already.

checkComparisonASync(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.VersusServiceCompare

checkConversions(String, int) - Method in class edu.illinois.ncsa.isda.softwareserver.ScriptDebugger

Check the conversions claimed by the given script.

checkServers() - Static method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Remove dead servers and their associated tasks.

clear() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Clear the graph.

close() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Close the connection to the software reuse server.

close() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.Polyglot

close() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotClient

Close the connection to the Polyglot server.

close() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotPanel

Close polyglot connections.

close() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Close all software server client connections.

close() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Close all software reuse client connections.

close() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Close the connection to the software server.

colorGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.DistributedSoftwareIOGraphPanel

Color the graph according to software servers.

command - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptType

command_head - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptType

command_tail - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptType

comment - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptType

compare(String, String, String, String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.VersusCompare

Compare two files.

compare(String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.VersusCompare

Compare two files.

compare(String, String, String, String, String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.VersusServiceCompare

compareRaw(String, String, String, String, String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.VersusServiceCompare

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Data

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.RemoteTaskInfo

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.TaskInfo

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Compare to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel_JUNG.UniqueString

Compare this string to another object

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.Point2D

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Data

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.RemoteTaskInfo

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.TaskInfo

Compare this object to another object.

compareTo(Object) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Compare to another object.

completedTasks() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to know the number of task completed since the server starts

completedTasks() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

complexity() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

complexity() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Print statistics about the IOGraph.

compute() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2Panel

computePath() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

configureScript(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.ScriptDebugger

Configure the given ICR script(s) to run on the current machine.

configureScript(String) - Method in class edu.illinois.ncsa.isda.softwareserver.ScriptDebugger

Configure the given ICR script(s) to run on the current machine.

connect() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

Connect to the VNC server.

continuousParam - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

Conversion2 - Class in edu.illinois.ncsa.isda.softwareserver.polyglot.weighted

Conversion using an application from input to output.

Conversion2(int, String, String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.Conversion2

Conversion2(int, String, String, String, double) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.Conversion2

conversions() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

convert(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.Polyglot

convert(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotClient

Convert a files format.

Convert(UriInfo, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to list all the output formats produced by the polyglot server

Convert(UriInfo, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

convert(SoftwareServerAuxiliary.FileData, Vector<PolyglotAuxiliary.Conversion<SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Application>>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Convert a files format.

convert(SoftwareServerAuxiliary.FileData, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Convert a files format.

convert(String, String, Vector<PolyglotAuxiliary.Conversion<SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Application>>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Convert a files format.

convert(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Convert a files format.

convert(SoftwareServerAuxiliary.FileData, Vector<PolyglotAuxiliary.Conversion<SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Application>>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Convert a files format.

convert(SoftwareServerAuxiliary.FileData, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Convert a files format.

convert(String, String, Vector<PolyglotAuxiliary.Conversion<SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Application>>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Convert a files format.

convert(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Convert a files format.

ConvertFile(UriInfo, String, HttpServletRequest, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to post a conversion request to the softwareserver

ConvertFile(UriInfo, String, HttpServletRequest, String, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

ConvertFmt(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to obtain a list the input formats associated with the output format

ConvertFmt(String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

convertLater(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.Polyglot

Convert a files format(asynchronously).

convertOverREST(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Convert a file's format using the Software Server's REST interface.

createFrame() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.DistributedSoftwareIOGraphPanel

Add this panel to a frame.

createFrame() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotMonitor

Add this panel to a frame.

createHTMLList(String, String, boolean, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Convert a line separated list into an HTML list of links.

createHTMLList(String, String, boolean, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Convert a line separated list into an HTML list of links.

createTests() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsToolHeadless

CSRPanel - Class in edu.illinois.ncsa.isda.softwareserver.polyglot.weighted

CSRPanel(URL) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.CSRPanel

D

debug(SoftwareServerClient) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Debug tests for a SoftwareReuseClient.

debug(SoftwareServerClient) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Debug tests for a SoftwareReuseClient.

defineAdvanceParam(FileWriter, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script AdvanceParam function definition - this function makes the AHK script to move on to the next param in args list (in runtime)

defineLookupParam(FileWriter, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script LookupParam function definition - this function checks whether a specific param is present in the script args

defineWin(FileWriter, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script Win function definition - this function makes the AHK script wait for a window to show

dijkstra(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Dijstra shortest path.

discreteParam - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

discreteParamSelected - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

displayConversionJob(String, int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsToolHeadless

Display information about a specific job.

displayJobs() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Display tests jobs in the jobs panel.

DistributedSoftwareIOGraphPanel - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

An IOGraph Panel which accepts only vertices and edges of type String which have information specific to software that is distributed among multiple machines.

DistributedSoftwareIOGraphPanel(IOGraph<String, String>, int) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.DistributedSoftwareIOGraphPanel

Class constructor.

DistributedSoftwareServerRestlet - Class in edu.illinois.ncsa.isda.softwareserver

A restful interface to multiple software servers.

DistributedSoftwareServerRestlet() - Constructor for class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

domains - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.ScriptHeader

dragEnter(DropTargetDragEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

dragExit(DropTargetEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

dragOver(DropTargetDragEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

drop(DropTargetDropEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

Handle drop events.

dropActionChanged(DropTargetDragEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

E

edge - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.Conversion

edge_colors - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

edge_strings - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

edu.illinois.ncsa.isda.softwareserver - package edu.illinois.ncsa.isda.softwareserver

The Software Server package.

edu.illinois.ncsa.isda.softwareserver.bak - package edu.illinois.ncsa.isda.softwareserver.bak

edu.illinois.ncsa.isda.softwareserver.parametrized - package edu.illinois.ncsa.isda.softwareserver.parametrized

Software Servers supporting parameters.

edu.illinois.ncsa.isda.softwareserver.polyglot - package edu.illinois.ncsa.isda.softwareserver.polyglot

The Polyglot package.

edu.illinois.ncsa.isda.softwareserver.polyglot.weighted - package edu.illinois.ncsa.isda.softwareserver.polyglot.weighted

Polyglot tools supporting weighted and parameterized I/O-graphs.

end_time - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.RequestInformation

Endpoints(UriInfo, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to list the of endpoints in the polyglot server

Endpoints(UriInfo, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

executables - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

executables - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

executables - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

executables - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

execute() - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Execute the script.

execute(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Execute a script.

execute() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Execute this script.

execute() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Execute the this task list and return the result of the last task.

execute(String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Execute the this task list and save the result of the last task to the specified path.

execute(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Execute a script.

execute() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Execute this script.

execute() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Execute the this task list and return the result of the last task.

execute(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Execute the this task list and save the result of the last task to the specified path.

executeAndWait(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Execute a script.

executeAndWait(String, String, String, int, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Execute this script.

executeAndWait(String, String, String, int) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Execute this script.

executeAndWait() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Execute this script.

executeAndWait(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Execute a script.

executeAndWait(String, String, String, int, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Execute this script.

executeAndWait(String, String, String, int) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Execute this script.

executeAndWait() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Execute this script.

executeTask(String, int, Vector<SoftwareServerAuxiliary.Subtask>, Vector<String>) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Execute the given task.

executeTask(int, String, String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Execute a task.

executeTask(String, int, Vector<SoftwareServerAuxiliary.Subtask>) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Execute the given task.

executeTask(int, String, String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Execute a task.

executeTask(int, String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Execute a task.

executeTaskLater(int, String, String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Execute a task asynchronously.

executeTaskLater(int, String, String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Execute a task asynchronously.

executeTaskLater(int, String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Execute a task asynchronously.

executeTasks(Vector<SoftwareServerAuxiliary.Subtask>) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Execute task on the software reuse server.

executeTasks(Vector<SoftwareServerAuxiliary.Subtask>) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Execute task on the software reuse server.

executeTasksLater(Vector<SoftwareServerAuxiliary.Subtask>) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Asynchronously execute a task on the software reuse server.

executeTasksLater(Vector<SoftwareServerAuxiliary.Subtask>) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Asynchronously execute a task on the software reuse server.

exists(int, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Check if the file exists in the cache.

exists(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.ScriptDebugger

Check if the specified file exists.

exists(int, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Check if the file exists in the cache.

existsURL(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Check if the specified URL exists.

exit_operation - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

exit_operation - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

ext - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.FileInformation

extension - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptType

F

File(UriInfo, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to download a file form polyglot server

File(UriInfo, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

filename - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

filename - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.FileInformation

filename - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.RequestInformation

filename - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

fileOrDir(UriInfo, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Returns a link to either a produced file or to a directory tree

fileOrDir(UriInfo, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

filesize - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.RequestInformation

findFilePath(File, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

finishScript(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds definition of used functions to the end of AHK script

FLAG - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.FileInformation

Form(UriInfo, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to obtain a list of actions that can be performed (get, post)

Form(UriInfo, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

form() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Returns a list of actions that can be performed (get or post or convert)

form() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

formatToken(String, String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

formats a string based on "path file" definitions, adding a prefix and a suffix

formPost(MultipartFormDataInput, String, String, UriInfo, HttpServletRequest, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Process a file submitted via the web form and return a link to the produced file

formPost(MultipartFormDataInput, String, String, UriInfo, HttpServletRequest, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

formPost(MultipartFormDataInput, String, String, UriInfo, String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Process a file submitted via the web form and return a link to the produced file

formPost(MultipartFormDataInput, String, String, UriInfo, String, String, String, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

Forms(UriInfo, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Return a web form to interact with the Software Server

Forms(UriInfo, String, String, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

G

generateFormatJSONString(String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

goes over the all "path" files to build the JSON string that defines the conversion to an output format

generateHeader(String, String, String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

generates the header for the script

generateJSONStringRec(BufferedReader) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

goes over a file "path" to build the JSON string based on the params defined in the file

generateParam(BufferedReader) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

generates JSON string for a param (including nested params)

generateParameterJSONString(File) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

wraps rec function that goes over a file "path" to build the JSON string

generateScript(String, File) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

wraps calls to generateScriptRec, so optional actions may be skipped if the param was not selected

generateScriptRec(BufferedReader, FileWriter, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

generates the AHK script

get(int) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Get a task from the list.

get() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel_JUNG.UniqueString

Get the string.

get(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Retrieve the specified software reuse client.

get(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Retrieve the specified software reuse client.

get(int) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Get a task from the list.

getAbsoluteName() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Get the files absolute name.

getAbsoluteName() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Get the files absolute name.

getActiveEdges() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the list indicating which edges are currently active.

getActiveVertices() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Determine and return which vertices are being used by the currently active edges.

getAdjacencyList() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the adjacency list representing graph edges.

getAlias() - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Get the script alias.

getApplication() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.Conversion2

getApplicationOperation(String, String, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Find a suitable application/operation given the desired application, operation, and data.

getApplicationOperation(String, String, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Find a suitable application/operation given the desired application, operation, and data.

getApplications() - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Get the applications available.

getApplications() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Get the utilized applications.

getApplications() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Get the list of applications available on the software reuse server.

getApplications() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get the applications available.

getApplications() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

List of all applications known to the IOGraph.

getApplications() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Get the utilized applications.

getApplications() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Get the list of applications available on the software reuse server.

getApplications() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Get the applications available.

getApplications() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Get the applications available.

getApplicationStack() - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Get an icon representation of the available software.

getApplicationStack() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get an icon representation of the available software.

getApplicationStack() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Get an icon representation of the available software.

getApplicationStack() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Get an icon representation of the available software.

getApplicationString(String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Get the string associated with the given application alias

getApplicationString(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Get the string associated with the given application alias

getApplicationTaskInputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Get the input formats supported by the given task.

getApplicationTaskInputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get the input formats supported by the given task.

getApplicationTaskInputs(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

getApplicationTaskInputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Get the input formats supported by the given task.

getApplicationTaskInputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Get the input formats supported by the given task.

getApplicationTaskInputsOutputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Get the input and output formats supported by the given task.

getApplicationTaskInputsOutputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get the input and output formats supported by the given task.

getApplicationTaskInputsOutputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Get the input and output formats supported by the given task.

getApplicationTaskInputsOutputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Get the input and output formats supported by the given task.

getApplicationTaskOutputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Get the output formats supported by the given task.

getApplicationTaskOutputs(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get the output formats supported by the given task from a known input format.

getApplicationTaskOutputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get the output formats supported by the given task.

getApplicationTaskOutputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Get the output formats supported by the given task.

getApplicationTaskOutputs(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Get the output formats supported by the given task.

getApplicationTaskParameters(String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

getApplicationTasks(String) - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Get the tasks available for the given application.

getApplicationTasks(Vector<SoftwareServerAuxiliary.Application>) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Get the tasks available for each of the given applications.

getApplicationTasks(String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get the tasks available for the given application.

getApplicationTasks(Vector<SoftwareServerAuxiliary.Application>) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Get the tasks available for each of the given applications.

getApplicationTasks(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Get the tasks available for the given application.

getApplicationTasks(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Get the tasks available for the given application.

getAssociatedInputScripts() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Search this scripts path for input scripts associated with this application.

getAssociatedInputScripts() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Search this scripts path for input scripts associated with this application.

getAssociatedOutputScripts() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Search this scripts path for output scripts associated with this application.

getAssociatedOutputScripts() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Search this scripts path for output scripts associated with this application.

getAuxiliaryInterfacePane() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Return an auxiliary interface pane.

getCacheFilename(int) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Get the file name of the cached file.

getCacheFilename(int) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Get the file name of the cached file.

getCacheName(int) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Get the name of the cached file.

getCacheName(int) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Get the name of the cached file.

getCachePath() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Get the servers cache path.

getCachePath() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Get the servers cache path.

getClients() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotClient

Get a list of connected client machines.

getCommand(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Get the execution command for the given script.

getCommand(String, String, String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Get the execution command for the given script.

getCommand(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Get the execution command for the given script.

getCommand(String, String, String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Get the execution command for the given script.

getCompletedTaskCount() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Get the number of completed tasks.

getCompletedTaskCount() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Get the number of completed tasks.

getConversion(String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the conversion possessing the given name, input, and output

getConversion(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

getConversions(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Parse a string containing conversion information

getConversions() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

List of all conversions known to the IOGraph.

getConvertForm() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get a web form interface for converting via this restful service.

getConvertForm() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Get a web form interface for converting via this restful service.

getConvertForm() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Get a web form interface for converting via this restful service.

getData() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Get the files data.

getData() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Get the files data.

getDistributedInputOutputGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.Polyglot

getDistributedInputOutputGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotClient

Get a string only version of this IOGraph encoded with host machines.

getDistributedInputOutputGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Get a string only version of this IOGraph encoded with host machines.

getDistributedInputOutputGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Get a string only version of this IOGraph encoded with host machines.

getDomain(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the set of all vertices that can reach the target vertex.

getDomain(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Return the list of all possible conversions reaching the vertex.

getDomainStrings() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get a set of all vertices that can reach other vertices.

getDomainStrings(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get a set of all vertices that can reach the target vertex.

getEdges() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the graph edges.

getEdgeStrings() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the string representations for the edges.

getEdgeWeight(V, V, E) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Return the weight associated with this conversion.

getEndpointCommaSeparatedValues(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Query a restlet endpoint that responds with lines of comma separated values.

getEndpointValues(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Query a restlet endpoint that responds with a line separated text list of values.

getExecutables() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Get the executables called by the script.

getExecutables() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Get the executables called by the script.

getFilename(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Parse the filename from the cached filename.

getFilename(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Parse the filename from the cached filename.

getForm(boolean, String, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Get a web form interface for this restful service.

getForm() - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Get a web form interface for this restful service.

getForm(boolean, String, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get a web form interface for this restful service.

getForm() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get a web form interface for this restful service.

getForm(boolean, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Get a web form interface for this restful service.

getForm(boolean, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

Get a web form interface for this restful service.

getForm() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

Get a web form interface for this restful service.

getForm(boolean, String, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Get a web form interface for this restful service.

getForm() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Get a web form interface for this restful service.

getForm(boolean, String, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Get a web form interface for this restful service.

getForm() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Get a web form interface for this restful service.

getFormat() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Get the files format.

getFormat() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Get the files format.

getFormat() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FormatParameters

getFormat() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Get the files format.

getFormat() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Get the files format.

getId() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.Conversion2

getInput() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.Conversion2

getInputOutputGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.Polyglot

getInputOutputGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotClient

Get the available inputs, outputs, and conversions.

getInputOutputGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Get the available inputs, outputs, and conversions.

getInputOutputGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Get the available inputs, outputs, and conversions.

getInputs() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Get the inputs available.

getInputs(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Get the inputs available for the given output type.

getIOGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Get the I/O-graph.

getIOGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Get the I/O-graph.

getIOGraph() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.CSRPanel

getIOGraphPanel() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.CSRPanel

getIOGraphStrings() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get a string only version of this IOGraph.

getJSParameters(String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get the HTML for parameters form

getKillCount() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Get the number of times the kill operation has been used.

getKillCount() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Get the number of times the kill operation has been used.

getMaxEdgeWeight(int, int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the maximum weight among parallel edges between the vertices specified.

getMaxPathWeights(Vector<Integer>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the maximum weights along the path specified.

getMinimumWeight() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Returns the minimum weight a path can be to be considered.

getName() - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Get the name of the script.

getName() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Get the files name.

getName() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Get the files name.

getName() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Get the files name.

getName() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Get the files name.

getNegativeAreas() - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Get the current set of negative areas.

getNonBusyServer(String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Find a non-busy server that can perform the given task.

getOperation() - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Get the operation the script performs.

getOperation() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.OperationParameters

getOperation(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Get the operation performed by the given script.

getOperation(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Get the operation performed by the given script.

getOperationScriptname(String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Return the name of an associated script for the given operation.

getOperationScriptname(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Return the name of an associated script for the given operation.

getOutput() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.Conversion2

getOutputEntries(Pair<String, String>, Double) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Given the comparison result from a job create the corresponding entries for the output file.

getOutputs() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.Polyglot

getOutputs(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.Polyglot

getOutputs(TreeSet<String>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.Polyglot

getOutputs() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotClient

Get the outputs available.

getOutputs(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotClient

Get the outputs available for the given input type.

getOutputs(TreeSet<String>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotClient

Get the common outputs available for the given input types.

getOutputs() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Get the outputs available.

getOutputs(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Get the outputs available for the given input type.

getOutputs(TreeSet<String>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Get the common outputs available for the given input types.

getOutputs() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Get the outputs available.

getOutputs(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Get the outputs available for the given input type.

getOutputs(TreeSet<String>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Get the common outputs available for the given input types.

getParallelEdges(V, V, E) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get a list of edges parallel to the given edge.

getParameters() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.Conversion2

getParamSelections() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.OperationParameters

getPath(Vector<Integer>, int, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Follow a path back from target to source given the single source shortest paths from the source.

getPathString(Vector<Integer>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Convert a path into a string representation.

getPopupMenu() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2Panel

getPort() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Get the port the server is listening to.

getPort() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Get the port this client is connect to.

getPort() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Get the port the server is listening to.

getPort() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Get the port this client is connect to.

getPositiveAreas() - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Get the current set of positive areas.

getRange(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Return a set of all reachable vertices from the given source.

getRange(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Return the list of all possible conversions starting at the vertex.

getRangeIntersection(TreeSet<Integer>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the range intersection of the vertices in the given set.

getRangeIntersectionStrings(TreeSet<String>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the range intersection of the vertices in the given set.

getRangeStrings() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Returns a set of vertex strings that are reachable from other vertices.

getRangeStrings(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Returns a set of vertex strings that are reachable from a given source vertex.

getResult(String, int, Vector<SoftwareServerAuxiliary.Subtask>) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Get the result of the given task (i.e.

getResult(String, int, Vector<SoftwareServerAuxiliary.Subtask>) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Get the result of the given task (i.e.

getScriptType(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptTypes

Retrieve info on a script type.

getScriptType(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptTypes

Retrieve info on a script type.

getServer() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Get the server this client is connected to.

getServer() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Get the server this client is connected to.

getServers() - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Get the software servers registered to this master service.

getServers() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.Polyglot

getServers() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotClient

Get a list of connected software reuse servers.

getServers() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Get a list of connected software reuse servers.

getServers() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Get a list of connected software reuse servers.

getSession() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Get a new session number.

getSession(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Parse the session id from the cached filename.

getSession() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Get a new session number.

getSession(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Parse the session id from the cached filename.

getShortestConversionPath(String, String, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the shortest list of the conversion tasks required to convert from a given input to a given output.

getShortestConversionPaths(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the shortest list of the conversion tasks required to convert from a given input to a given output.

getShortestConversionPathString(String, String, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the shortest list of the conversion tasks required to convert from a given input to a given output.

getShortestConversionPathStrings(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the shortest list of the conversion tasks required to convert from a given input to a given output.

getShortestPath(String, String, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Returns the shortest path from the input to the output.

getShortestPath(String, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Return a map that shows for each node what conversion to use to get to the previous node, resulting in then end finding the path all the way back to the source node.

getShortestPaths(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Perform a breadth first search from the vertex at the given index and store the resulting paths.

getShortestWeightedPaths(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Perform Dijkstra's algorithm from the vertex at the given source index and store the resulting paths.

getShortestWeightedPathsOriginal(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

getSoftware() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Get the software available.

getSoftwareReuseClient() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Get the associated software reuse client.

getSoftwareReuseClient() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Get the associated software reuse client.

getStatus() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Get the status of the software reuse server.

getStatus() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Get the status of the software reuse server.

getSubtasks() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Get the vector of subtasks.

getSubtasks() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Get the vector of subtasks.

getSystemScripts(TreeSet<String>, String, TreeSet<String>, boolean) - Static method in class edu.illinois.ncsa.isda.softwareserver.ScriptInstaller

Search the CSR for scripts for applications on the local system.

getSystemScripts(TreeSet<String>, String, boolean) - Static method in class edu.illinois.ncsa.isda.softwareserver.ScriptInstaller

Search the CSR for scripts for applications on the local system.

getTask(TreeSet<SoftwareServerAuxiliary.TaskInfo>, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.TaskInfo

Find the task information for the specified task name.

getTask(String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Get the task involved in using the given applications to convert the given file to the specified output format.

getTask(TreeSet<SoftwareServerAuxiliary.TaskInfo>, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.TaskInfo

Find the task information for the specified task name.

getTask(String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Get the task involved in using the given applications to convert the given file to the specified output format.

getTask(String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Get the task involved in using the given applications to convert the given file to the specified output format.

getTaskCount() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Get the number of tasks received since starting up.

getTaskCount() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Get the number of tasks received since starting up.

getTaskInfo(String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

getTempPath() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Get the servers temp path.

getTempPath() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Get the servers temp path.

getTestFiles(Vector<String>, String, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.ScriptInstaller

Search the CSR for test files for the given scripts.

getType(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.VersusCompare

Get the data type of the given file based on its extension.

getUniqueEdges() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get a set of the unique edges in the graph.

getUniqueEdgeStrings() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the string representations for the unique edges in the graph.

getValidApplications() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Returns the list of all applications used when finding the shortest path.

getVertexStrings() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the string representations for the vertices.

getVertexStringsStartingWith(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the string representations for the vertices that start with the given prefix.

getVertices() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Get the graph vertices.

getVertices(Vector<String>) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.Point2D

Create vertices from a vector names.

getVertices() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

List of all vertices in the graph.

getWeight() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.Conversion2

grindScript(String, int, int, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.ScriptDebugger

Check the robustness of the script by running it over and over again.

grindScript(String, int, int) - Method in class edu.illinois.ncsa.isda.softwareserver.ScriptDebugger

Check the robustness of the script by running it over and over again.

H

HTMLEncodeJob(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Highlight the parts of the job via HTML encoding.

httpGetHandler() - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

httpGetHandler() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

httpGetHandler() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

Handle HTTP GET requests.

httpGetHandler() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

httpPostHandler(Representation) - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

httpPostHandler(Representation) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

httpPostHandler(Representation) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

Handle HTTP POST requests.

httpPostHandler(Representation) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

I

icon - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

icon - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

icr - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

icr - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

in_parameters - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

init() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphApplet

Initialize the applet.

init() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotMonitorApplet

Initialize the applet.

init() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2Applet

Initialize the applet.

init() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraphApplet

Initialize the applet.

initialize() - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Initialize.

initialize() - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Initialize.

inparameters - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

input - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.RemoteTaskInfo

input - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.Conversion

input - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.RequestInformation

input - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.RemoteTaskInfo

input_data - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Subtask

input_data - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Subtask

inputFormats - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.ScriptHeader

inputs - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

inputs - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

inputs - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.TaskInfo

Inputs(UriInfo, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to list all the input formats the polyglot server is able to serve

Inputs(UriInfo, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

inputs - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Operation

inputs - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

inputs - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.TaskInfo

InputsOut(UriInfo, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to list all the input formats that can be converted to output format

InputsOut(UriInfo, String, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

IOGraph<V extends Comparable,E> - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

IOGraph() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

IOGraph(SoftwareServerClient) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Class constructor.

IOGraph(String, String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Class constructor (loads data from a CSR database).

IOGraph(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Class constructor (loads data from a CSR database via a web script to bypass database access restrictions).

IOGraph2 - Class in edu.illinois.ncsa.isda.softwareserver.polyglot.weighted

Graph that contains all possible conversions.

IOGraph2() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Create an empty IOGraph.

IOGraph2Applet - Class in edu.illinois.ncsa.isda.softwareserver.polyglot.weighted

An applet to simply hold an IOGraphPanel.

IOGraph2Applet() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2Applet

IOGraph2Panel - Class in edu.illinois.ncsa.isda.softwareserver.polyglot.weighted

Draw the IOGraph in a panel as well as the list of applications and the path when a source and target vertex are selected.

IOGraph2Panel(IOGraph2) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2Panel

IOGraphApplet - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

An applet to simply hold an IOGraphPanel.

IOGraphApplet() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphApplet

IOGraphApplet - Class in edu.illinois.ncsa.isda.softwareserver.polyglot.weighted

An applet to simply hold an IOGraphPanel.

IOGraphApplet() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraphApplet

IOGraphPanel<V extends Comparable,E> - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A panel/program that displays a graph of input/output operations and allows for the exploration of paths among them from a source to a target.

IOGraphPanel() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Class constructor.

IOGraphPanel(IOGraph<V, E>, int) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Class constructor.

IOGraphPanel(IOGraph<V, E>, int, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Class constructor.

IOGraphPanel(IOGraph<V, E>, int, int, int) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Class constructor.

IOGraphPanel(IOGraph<V, E>, int, int, int, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Class constructor.

IOGraphPanel_JUNG<V extends Comparable,E> - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

IOGraphPanel_JUNG(IOGraph<V, E>, int) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel_JUNG

Class constructor.

IOGraphPanel_JUNG(IOGraph<V, E>, int, int, int) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel_JUNG

Class constructor.

IOGraphPanel_JUNG.ToAbbreviatedStringLabeller<V> - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A class which abbreviates vertex strings during label rendering.

IOGraphPanel_JUNG.ToAbbreviatedStringLabeller() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel_JUNG.ToAbbreviatedStringLabeller

IOGraphPanel_JUNG.UniqueString - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A class that simply wraps a string so that as a comparable it is never equal to another string.

IOGraphPanel_JUNG.UniqueString(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel_JUNG.UniqueString

Class constructor.

IOGraphWeightsTool - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A program to facilitate in the running of polyglot tests to fill in I/O-Graph edge weights.

IOGraphWeightsTool(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Class constructor.

IOGraphWeightsToolHeadless - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A program to facilitate in the running of polyglot tests to fill in I/O-Graph edge weights.

IOGraphWeightsToolHeadless(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsToolHeadless

Class constructor.

isAlive() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Check if connection is alive.

isAlive() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Check if connection is alive.

isBusy() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Is the server busy executing a task?

isBusy() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Check if the software reuse server is busy executing another task.

isBusy() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Is the server busy executing a task?

isBusy() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Check if the software reuse server is busy executing another task.

isEmpty() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Determine if this instance is empty or not.

isEmpty() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Determine if this instance is empty or not.

isJSONRequest(Request) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Check if the given request is for json only.

isPlainRequest(Request) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Check if the given request is for plain text only.

isRunnable(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptTypes

Check if a script of the given type is runnable on the current platform.

isTextOnly(Request) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Check if the given request is for plain text only.

J

jobFolderStatus(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Check the contents of a job folder and return its status.

jobFolderStatus(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsToolHeadless

Check the contents of a job folder and return its status.

K

keyPressed(KeyEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

keyPressed(KeyEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

keyReleased(KeyEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

keyReleased(KeyEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

keyTyped(KeyEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

keyTyped(KeyEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

Handle key typed events.

kill_operation - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

kill_operation - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

kills() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to know the number of task killed since the server starts

kills() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

L

lastClickToDoubleClick() - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Upgrade the last single click to a double click.

lastLine() - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Get the last line of the script.

layoutVertices() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2Panel

length() - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Get the number of lines in the script.

listApplications(UriInfo, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Returns a list of applications available in software server

listApplications(UriInfo, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

listen(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Start listening for SoftwareServers.

listen(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Start listening for SoftwareServers.

listInputAndOutputFormats(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Returns a list of input and output file formats accepted and produced by the application

listInputAndOutputFormats(String, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

listInputFormats(UriInfo, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Returns a list of input file formats accepted by the application

listInputFormats(UriInfo, String, String, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

listOutputFile(UriInfo, String, String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Returns a link to the produced file

listOutputFile(UriInfo, String, String, String, String, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

listOutputFmts(UriInfo, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Return a list of the file formats produced by the application

listOutputFmts(UriInfo, String, String, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

listTasks(UriInfo, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Returns a list of tasks performed by a particular application

listTasks(UriInfo, String, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

load(String) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Load a script.

load(String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Load the file data into this structure.

load(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Load graph from the given file.

load(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Load the file data into this structure.

load() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to get a measure of the server load

load() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

loadConfiguration(String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Initialize based on parameters within the given configuration file.

loadConfiguration(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Load a configuration file.

loadConfiguration(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsToolHeadless

Load a configuration file.

loadConfiguration(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotPanel

Initialize based on parameters within the given configuration file.

loadConfiguration(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotServer

Initialize based on parameters within the given configuration file.

loadConfiguration(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotWebInterface

Load a configuration file.

loadConfiguration(String) - Method in class edu.illinois.ncsa.isda.softwareserver.ScriptDebugger

Load values from a configuration file.

loadConfiguration(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Initialize based on parameters within the given configuration file.

loadEdgeWeights(String, Double) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Load edge weights from the given file.

loadFolder(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Load all files of the given extension beneath the given folder.

loadFolder(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsToolHeadless

Load all files of the given extension beneath the given folder.

loadJobs() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Use IOGraph to determine jobs but check if an old test exists as well and update it if necessary!

loadJobs() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsToolHeadless

Use IOGraph to determine jobs but check if an old test exists as well and update it if necessary!

M

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

AHKScriptBuilder can be called from cmd line by giving 2 arguments: output AHK script directory path and input files directory path

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

Start the ICRMonkey.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.Benchmark

Run a benchmark.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Start the restful service.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

A main to execute a monkey script from the command line.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

A main for the ICR service.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary

A main for debug purposes.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Startup a software reuse client command prompt.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Start the restful service.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.DistributedSoftwareIOGraphPanel

The main starting point for this program.

main(String...) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

The main starting point for this program.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel_JUNG

The main starting point for this program.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Start the I/O-Graph weights tool.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsToolHeadless

Start the I/O-Graph weights tool.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotClient

Command line polyglot interface.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotMonitor

Monitor a Polyglot server.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotPanel

Start the Polyglot file manager, essentially an instance of a PolyglotPanel.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Start the Polyglot REST interface.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

Start the Polyglot REST interface.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotServer

A main for the Polyglot service.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Command line polyglot interface.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Command line polyglot interface.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotWebInterface

A main to start the polyglot web server.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.VersusCompare

Compare two files.

main(String...) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2Panel

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.ScriptDebugger

Debug an ICR script.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.ScriptInstaller

The script installer main.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

Start the monkey script session.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

The programs main.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

A main for the ICR service.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary

A main for debug purposes.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Startup a software reuse client command prompt.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to initialize and start the servlet server called the Tiny Java Web Server and Servlet (TJWS) Container.

main(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Start the restful service.

mainOriginal(String[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

A main for debug purposes.

maxRange - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

memory() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to know the memory available to the server

memory() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

minRange - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

monitor_operation - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

monitor_operation - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

MonkeyScript - Class in edu.illinois.ncsa.isda.softwareserver

A class representing an monkey script.

MonkeyScript() - Constructor for class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Class constructor.

MonkeyScript(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Class constructor.

MonkeyScript(String, Vector<String>) - Constructor for class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Class constructor.

mouseClicked(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

mouseClicked(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

mouseClicked(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

mouseClicked(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

mouseDragged(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

The mouse dragged listener used to select edges.

mouseDragged(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

Handle mouse motion events.

mouseDragged(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

Handle mouse motion events.

mouseEntered(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

mouseEntered(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

mouseEntered(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

mouseEntered(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

mouseExited(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

mouseExited(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

mouseExited(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

mouseExited(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

mouseMoved(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

mouseMoved(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

mouseMoved(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

mousePressed(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

Handle mouse pressed events.

mousePressed(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

The mouse pressed listener used to open the popup menu.

mousePressed(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

Handle mouse pressed events.

mousePressed(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

Handle mouse pressed events.

mouseReleased(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

mouseReleased(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

The mouse released listener used to de-select edges.

mouseReleased(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

Handle mouse release events.

mouseReleased(MouseEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

Handle mouse release events.

mouseWheelMoved(MouseWheelEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Handle mouse wheel events.

N

name - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

name - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

name - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

name - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.TaskInfo

name - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.FileInformation

name - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

name - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Operation

name - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

name - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptType

name - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.TaskInfo

nameForDisplay - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

nameInSoftware - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

nestedParams - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

newFormat(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Create a new FileData instance representing this format.

newFormat(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Create a new FileData instance representing this format.

nextWord(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

returns the next word of a string

O

operation - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.OperationParameters

operation - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

operation - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Subtask

operation - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

operation - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Subtask

operations - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

operations - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

os - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptType

out_parameters - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

outparameters - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

output - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.RemoteTaskInfo

output - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.Conversion

output - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.RequestInformation

output - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.RemoteTaskInfo

output_data - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Subtask

output_data - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Subtask

outputFormats - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.ScriptHeader

outputs - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

outputs - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

outputs - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.TaskInfo

Outputs() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to list all the file formats the polyglot server is able to produce

Outputs() - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

outputs - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Operation

outputs - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

outputs - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.TaskInfo

P

paint(Graphics) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Draw the graph to the given graphics context.

paint(Graphics) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Paint this panel to the given graphics context

paint(Graphics) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

Draw this panel to the given graphic context.

paint(Graphics) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

Auxiliary code for the VncViewer's VncCanvas paint method.

paintComponent(Graphics) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Draw this component (called during resizing!)

paramSelections - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.OperationParameters

parseFormatList(String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Parse a line from a script header containing a format list

parseFormatList(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Parse a line from a script header containing a format list

path - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

path - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.FileInformation

path - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Polyglot - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

An interface for file format conversion services that contain at its heart an I/O-Graph built around a set of Software Server clients.

Polyglot() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.Polyglot

PolyglotAuxiliary - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

Helper classes for the polyglot package.

PolyglotAuxiliary() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary

PolyglotAuxiliary.Conversion<V extends Comparable,E> - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A simple structure to store a single conversion task.

PolyglotAuxiliary.Conversion() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.Conversion

PolyglotAuxiliary.Conversion(V, V, E) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.Conversion

Class constructor.

PolyglotAuxiliary.FileInformation - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A structure to hold file information.

PolyglotAuxiliary.FileInformation(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.FileInformation

Class constructor to initialize the file information.

PolyglotAuxiliary.Point2D - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A convenient structure for holding vertex information when displaying an IOGraph.

PolyglotAuxiliary.Point2D(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.Point2D

Class constructor.

PolyglotAuxiliary.RequestInformation - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A structure to store information about Polyglot requests.

PolyglotAuxiliary.RequestInformation(String, String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.RequestInformation

Class constructor.

PolyglotClient - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

PolyglotClient(String, int) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotClient

Class constructor.

PolyglotException - Exception in edu.illinois.ncsa.isda.softwareserver.polyglot.weighted

PolyglotException(String) - Constructor for exception edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.PolyglotException

PolyglotException(String, Throwable) - Constructor for exception edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.PolyglotException

PolyglotMonitor - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A tool to monitor the status of a Polyglot server.

PolyglotMonitor(String, int) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotMonitor

Class constructor.

PolyglotMonitor(PolyglotSteward) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotMonitor

Class constructor.

PolyglotMonitorApplet - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

An applet to hold a PolyglotMonitor.

PolyglotMonitorApplet() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotMonitorApplet

PolyglotPanel - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A panel with a file manager look and feel designed for convenient file format conversions.

PolyglotPanel(JFrame, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotPanel

Class constructor.

PolyglotRESTEasy - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A restful interface for a polyglot steward.

PolyglotRESTEasy() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Class constructor.

PolyglotRESTEasyInterface - Interface in edu.illinois.ncsa.isda.softwareserver.polyglot

PolyglotRestlet - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A restful interface for a polyglot steward.

PolyglotRestlet() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

PolyglotServer - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

PolyglotServer(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotServer

Class constructor.

PolyglotSteward - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A class that coordinates the use of several software reuse clients via I/O-graphs to perform file format conversions.

PolyglotSteward() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Class constructor.

PolyglotSteward(PolyglotSteward) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Class copy constructor.

PolyglotStewardThreaded - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A class that coordinates the use of several software reuse clients via I/O-graphs to perform file format conversions.

PolyglotStewardThreaded() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Class constructor.

PolyglotStewardThreaded(PolyglotStewardThreaded) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Class copy constructor.

PolyglotWebInterface - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A background process that monitors a folder for conversion tasks.

PolyglotWebInterface(String, boolean) - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotWebInterface

Class constructor.

possibleValues - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

prepareExtraParams(File) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

searches for params in "path" files and adds necessary AHK code when found

print() - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Display this script.

print(Vector<SoftwareServerAuxiliary.Application>) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

Display information on available applications.

print(Vector<SoftwareServerAuxiliary.Operation>) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

Display operation information.

print(String, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

print() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Print information about the given tasks.

print(Vector<SoftwareServerAuxiliary.Subtask>) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Print the given tasks.

print(Vector<SoftwareServerAuxiliary.Subtask>, Vector<SoftwareServerAuxiliary.Application>) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Print the given tasks.

print(Vector<SoftwareServerAuxiliary.Application>) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

Display information on available applications.

print(Vector<SoftwareServerAuxiliary.Operation>) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Operation

Display operation information.

print() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptTypes

Display all script type information.

print() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Print information about the given tasks.

print(Vector<SoftwareServerAuxiliary.Subtask>) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Print the given tasks.

print(Vector<SoftwareServerAuxiliary.Subtask>, Vector<SoftwareServerAuxiliary.Application>) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Print the given tasks.

printApplicationOperation(Pair<Integer, Integer>) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Print information about a given application/operation.

printApplicationOperation(Pair<Integer, Integer>) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Print information about a given application/operation.

printEdgeInformation() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Display information about each unique edge.

printEdgeInformation(E) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Display information about an edge.

printErrorMessage(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Returns an error message

printErrorMessage(String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

printErrorMessage(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Returns an error message

printErrorMessage(String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

printMaxWeightedEdge() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Find the edge with the largest weight.

printMinWeightedEdge() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Find the edge with the smallest weight.

printMinWeightedVertex() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Find the vertex with the shortest combined traversed weight when visited from other vertices.

processGet(UriInfo, String, String, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Returns a link to the produced file

processGet(UriInfo, String, String, String, String, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

processNewHeader() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

processOldHeader(String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

processors() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to know the number of processor available to the server

processors() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

processPost(MultipartFormDataInput, String, String, UriInfo, HttpServletRequest, String, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

This is an auxiliary method working for the formPost() and the taskPost() methods.

processPost(MultipartFormDataInput, String, String, UriInfo, String, String, String, String, boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

This is an auxiliary method working for the formPost() and the taskPost() methods.

Q

queryEndpoint(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

Query an endpoint.

queryEndpoint(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Query an endpoint.

queryEndpoint(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Query an endpoint.

R

range - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

readLine(BufferedReader) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

reads a new line from the input buffer

reboot() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to reboot the server remotely in case it is necessary

reboot() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

rebootMachine() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Reboot the machine the software server is running on.

rebootMachine() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Reboot the machine the software server is running on.

removeDoubleQuotes(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

removes double quotes from a string (first and last chars)

removeParameters(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Remove parameters from a URL.

removeParameters(String) - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Remove parameters from a URL.

repaint() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

Repaint the VncViewer's VncCanvas.

replaceScriptFileInfo(File[]) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

replaceStringInScript(File, String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

requestNewSession() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Request a new session.

requestNewSession() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Request a new session.

Requests() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to obtain of a list of the processed task since startup

Requests() - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

reset() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Reset the IOGraph.

reset() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to reset the server remotely in case it is necessary

reset() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

resetCounts() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Reset task counters to zero.

resetCounts() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Reset task counters to zero.

resetWeights() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Sets all the weights of all conversions to unknown.

retrieveData(SoftwareServerAuxiliary.CachedFileData) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Retrieve cached file data from the software reuse server.

retrieveData(SoftwareServerAuxiliary.CachedFileData) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Retrieve cached file data from the software reuse server.

retrieveDataLater(SoftwareServerAuxiliary.CachedFileData) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Synchronously retrieve cached file data from the server.

retrieveDataLater(SoftwareServerAuxiliary.CachedFileData) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Synchronously retrieve cached file data from the server.

run() - Method in class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

Background thread to record user interaction.

run() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Process ICR requests.

run() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Run the current test.

run() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotMonitor

Continuously check the status of the Polyglot server and display the results.

run() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotServer

Process Polyglot requests.

run() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Clean up lost connections.

run() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Clean up lost connections.

run() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotWebInterface

The starting point for the thread that monitors the uploads directory for tasks.

run() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

Background thread to capture screen shots and record interaction.

run() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Process ICR requests.

runTests() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsToolHeadless

Run the current test.

S

save(String) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Save the script to the given path.

save(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Save the file data to a file.

save(String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Save the file data to a file.

screen() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to have a look at the server screen and determine if the server must be restarted due to hang application.

screen() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

script - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

script - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Operation

scriptChoose(String, FileWriter, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that choose an item from a dropdown menu based on the definitions in the input file

scriptClick(String, FileWriter, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that click a button based on the definitions in the input file

scriptComment(String, FileWriter, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds a comment to the AHK script file

ScriptDebugger - Class in edu.illinois.ncsa.isda.softwareserver

A tool for debugging ICR scripts.

ScriptDebugger(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.ScriptDebugger

Class constructor.

scriptIfWin(String, FileWriter, String, BufferedReader, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

not currently in use adds functionality to AHK script to deal with window pop ups that may or may not appear

scriptInputParam(String, FileWriter, BufferedReader, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds a new param to the AHK script

scriptInsert(String, FileWriter, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that insert text into an "edit box" based on the definitions in the input file

ScriptInstaller - Class in edu.illinois.ncsa.isda.softwareserver

A program to setup a software reuse server on the local machine.

ScriptInstaller() - Constructor for class edu.illinois.ncsa.isda.softwareserver.ScriptInstaller

scriptMenu(String, FileWriter, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that choose a menu item based on the definitions in the input file

scriptParamButton(String, FileWriter, BufferedReader, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that click (or not) a button according to the param selection

scriptParamCheckbox(String, FileWriter, BufferedReader, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that check/unchek a checkbox according to the param selection

scriptParamDropdownMenu(String, FileWriter, BufferedReader, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that choose an item of a dropdown menu according to the param selection

scriptParamMenu(String, FileWriter, BufferedReader, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that choose an item of a menu according to the param selection

scriptParamSaveText(String, FileWriter, BufferedReader, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds a "save text" command to the AHK script that will be executed if the param is selected

scriptParamScroll(String, FileWriter, BufferedReader, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that move a scrollbar according to the param selection

scriptParamUserInput(String, FileWriter, BufferedReader, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that insert text into an "edit box" according to the param selection

scriptRun(String, FileWriter, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds all initial info to AHK script

scriptSaveText(String, FileWriter, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that saves text to a file based on the definitions in the input file

scriptScrollbar(String, FileWriter, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that move a scrollbar based on the definitions in the input file

scriptSelect(String, FileWriter, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script commands that check/uncheck a checkbox based on the definitions in the input file

scripttypes - Static variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

scriptWait(String, FileWriter, int, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds AHK commands that create a "wait" in the AHK script execution

scriptWin(String, FileWriter, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds to the AHK script a call to Win() which will (in runtime) wait for a window and show it

scriptWrite(String, FileWriter, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

adds text to the AHK script file

sendData(SoftwareServerAuxiliary.FileData) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Send file data to the software reuse server.

sendData(SoftwareServerAuxiliary.FileData) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Send file data to the software reuse server.

sendDataLater(SoftwareServerAuxiliary.FileData) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Asynchronously send file data to the server.

sendDataLater(SoftwareServerAuxiliary.FileData) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Asynchronously send file data to the server.

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Data

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Subtask

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Data

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Operation

serialVersionUID - Static variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Subtask

serveConnection(int, Socket) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Process requests from the given connection.

serveConnection(int, Socket) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotServer

Process requests from the given connection.

serveConnection(int, Socket) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Process requests from the given connection.

servers - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.RemoteTaskInfo

Servers() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to list the software servers connected to polyglot server

Servers() - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

servers - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.RemoteTaskInfo

set(int, String) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Set a line of the script.

set(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel_JUNG.UniqueString

Set the string.

setActiveEdges(Boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Set all edges to the given value.

setActiveEdges(TreeSet<String>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Set only listed edges to active.

setAlias(String) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Set the script alias.

setApplicationFlexibility(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Set the flexibility when choosing an application where 0=none (default), 1=allow parallel applications with the same name (different software reuse servers), 2=allow all parallel applications.

setApplicationFlexibility(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Set the flexibility when choosing an application where 0=none (default), 1=allow parallel applications with the same name (different software reuse servers), 2=allow all parallel applications.

setCapturing(boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

Enable/disable screen shot capturing.

setDataPath(String) - Method in class edu.illinois.ncsa.isda.softwareserver.ScriptDebugger

Set the data path.

setEdgeColor(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Set the edge color.

setEdgeWeight(Double) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Sets the weight for all edges.

setEdgeWeight(String, String, String, Double) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Set the weight of the given edge.

setEnableWeightedPaths(boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Enable/disable the use of weighted paths when searching for conversions in the graph.

setEndOfRequest(boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.RequestInformation

Set the end time of the request along with whether or not the conversion was successful or not

setMaxTaskTime(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Set the maximum time to wait for a task to complete (used with the Software Server REST interface).

setMinimumWeight(double) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Sets the minimum weight a path can be to be considered path of the graph.

setOperation(String) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Set the operation the script will perform.

setOutputPanelHeight(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Set the height of the output panel.

setPopupMenu() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotPanel

Set the popup menu.

setReturnURL(boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

Set whether or not to return a URL as the result (as opposed to the file itself).

setServer(String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

Set the VNC server to connect to.

setSidePaneWidth(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Set the width of the auxiliary side pane.

setSize(int, int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Set the size of this panel.

setSoftwareServerRESTInterface(boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

Set whether or not to access Software Servers via their REST interface.

setSoftwareServerRESTPort(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Set the software server port.

setValidApplications(Set<String>) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Sets the list of applications that should be considered when finding a conversion path.

setVertexColor(int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Set the vertex color.

setViewEdgeQuality(boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

Enable/disable the display of edge quality information in the graph.

setWeight(double) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.Conversion2

setWeight(String, String, String, double) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

Sets the weight of all conversions matching the triple [input, output, application].

showEdge(int, int) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

showEdgeQuality(boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2Panel

showParameters(Conversion2) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2Panel

size() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Get the number of tasks in the list.

size - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.FileInformation

size() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Get the number of software reuse clients being used.

size() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotStewardThreaded

Get the number of software reuse clients being used.

size() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Get the number of tasks in the list.

software - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.ScriptHeader

Software() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Used to list the applications available in polyglot server

Software() - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

SoftwareMonkey_DS - Class in edu.illinois.ncsa.isda.softwareserver

A program for creating monkey scripts (monkey see, monkey do)

SoftwareMonkey_DS(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_DS

Class constructor.

SoftwareMonkey_F - Class in edu.illinois.ncsa.isda.softwareserver.bak

A program for creating monkey scripts (monkey see, monkey do) TODO: This is work in progress, must make this approach workable!

SoftwareMonkey_F() - Constructor for class edu.illinois.ncsa.isda.softwareserver.bak.SoftwareMonkey_F

SoftwareMonkey_VNC - Class in edu.illinois.ncsa.isda.softwareserver

A program for creating monkey scripts (monkey see, monkey do)

SoftwareMonkey_VNC(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareMonkey_VNC

Class constructor.

softwareParameters - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.ScriptHeader

SoftwareServer - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

An Imposed Code Reuse server.

SoftwareServer() - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Class constructor.

SoftwareServer(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Class constructor.

SoftwareServer - Class in edu.illinois.ncsa.isda.softwareserver

A Software Server.

SoftwareServer() - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Class constructor.

SoftwareServer(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Class constructor.

SoftwareServerAuxiliary - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

Helper classes for the Software Server package.

SoftwareServerAuxiliary() - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary

SoftwareServerAuxiliary - Class in edu.illinois.ncsa.isda.softwareserver

Helper classes for the Software Server package.

SoftwareServerAuxiliary() - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary

SoftwareServerAuxiliary.Application - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

A structure to store information about applications.

SoftwareServerAuxiliary.Application(String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

Class constructor.

SoftwareServerAuxiliary.Application(SoftwareServerAuxiliary.Script) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

Class constructor.

SoftwareServerAuxiliary.Application - Class in edu.illinois.ncsa.isda.softwareserver

A structure to store information about applications.

SoftwareServerAuxiliary.Application(String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

Class constructor.

SoftwareServerAuxiliary.Application(SoftwareServerAuxiliary.Script) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

Class constructor.

SoftwareServerAuxiliary.CachedFileData - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

A pointer to a file stored in an externally defined cache directory.

SoftwareServerAuxiliary.CachedFileData() - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

SoftwareServerAuxiliary.CachedFileData(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Class constructor.

SoftwareServerAuxiliary.CachedFileData(String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Class constructor.

SoftwareServerAuxiliary.CachedFileData(SoftwareServerAuxiliary.FileData, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Class constructor.

SoftwareServerAuxiliary.CachedFileData(SoftwareServerAuxiliary.FileData, int, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Class constructor.

SoftwareServerAuxiliary.CachedFileData(SoftwareServerAuxiliary.CachedFileData, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Class copy constructor.

SoftwareServerAuxiliary.CachedFileData - Class in edu.illinois.ncsa.isda.softwareserver

A pointer to a file stored in an externally defined cache directory.

SoftwareServerAuxiliary.CachedFileData() - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

SoftwareServerAuxiliary.CachedFileData(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Class constructor.

SoftwareServerAuxiliary.CachedFileData(String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Class constructor.

SoftwareServerAuxiliary.CachedFileData(SoftwareServerAuxiliary.FileData, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Class constructor.

SoftwareServerAuxiliary.CachedFileData(SoftwareServerAuxiliary.FileData, int, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Class constructor.

SoftwareServerAuxiliary.CachedFileData(SoftwareServerAuxiliary.CachedFileData, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Class copy constructor.

SoftwareServerAuxiliary.Data - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

An container for some kind of data.

SoftwareServerAuxiliary.Data() - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Data

SoftwareServerAuxiliary.Data - Class in edu.illinois.ncsa.isda.softwareserver

An container for some kind of data.

SoftwareServerAuxiliary.Data() - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Data

SoftwareServerAuxiliary.FileData - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

Data representing a file with a path, a name, and a format (possibly also buffered in memory).

SoftwareServerAuxiliary.FileData() - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

SoftwareServerAuxiliary.FileData(String, boolean) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Class constructor.

SoftwareServerAuxiliary.FileData - Class in edu.illinois.ncsa.isda.softwareserver

Data representing a file with a path, a name, and a format (possibly also buffered in memory).

SoftwareServerAuxiliary.FileData() - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

SoftwareServerAuxiliary.FileData(String, boolean) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Class constructor.

SoftwareServerAuxiliary.FormatParameters - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

holds parameter data for a specific format conversion

SoftwareServerAuxiliary.FormatParameters() - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FormatParameters

SoftwareServerAuxiliary.Operation - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

A structure representing an operation an application supports (think of mathematical functions).

SoftwareServerAuxiliary.Operation(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

Class constructor.

SoftwareServerAuxiliary.Operation(SoftwareServerAuxiliary.Script) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

Class constructor.

SoftwareServerAuxiliary.Operation - Class in edu.illinois.ncsa.isda.softwareserver

A structure representing an operation an application supports (think of mathematical functions).

SoftwareServerAuxiliary.Operation(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Operation

Class constructor.

SoftwareServerAuxiliary.Operation(SoftwareServerAuxiliary.Script) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Operation

Class constructor.

SoftwareServerAuxiliary.OperationParameters - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

holds parameter data for a specific operation to be performed

SoftwareServerAuxiliary.OperationParameters(String, List<SoftwareServerAuxiliary.SingleParameter>) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.OperationParameters

SoftwareServerAuxiliary.OperationParameters() - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.OperationParameters

SoftwareServerAuxiliary.Parameters - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

SoftwareServerAuxiliary.Parameters(SoftwareServerAuxiliary.FormatParameters, SoftwareServerAuxiliary.FormatParameters, SoftwareServerAuxiliary.SoftwareParameters) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Parameters

SoftwareServerAuxiliary.RemoteTaskInfo - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

A structure storing information about a task on a remote server.

SoftwareServerAuxiliary.RemoteTaskInfo(String, String, String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.RemoteTaskInfo

Class constructor.

SoftwareServerAuxiliary.RemoteTaskInfo - Class in edu.illinois.ncsa.isda.softwareserver

A structure storing information about a task on a remote server.

SoftwareServerAuxiliary.RemoteTaskInfo(String, String, String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.RemoteTaskInfo

Class constructor.

SoftwareServerAuxiliary.Script - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

A structure representing a wrapper script.

SoftwareServerAuxiliary.Script(String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

Class constructor.

SoftwareServerAuxiliary.Script - Class in edu.illinois.ncsa.isda.softwareserver

A structure representing a wrapper script.

SoftwareServerAuxiliary.Script() - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Class constructor.

SoftwareServerAuxiliary.Script(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Class constructor.

SoftwareServerAuxiliary.Script(String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

Class constructor.

SoftwareServerAuxiliary.ScriptHeader - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

a wrapper for the script header

SoftwareServerAuxiliary.ScriptHeader() - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.ScriptHeader

SoftwareServerAuxiliary.ScriptType - Class in edu.illinois.ncsa.isda.softwareserver

A structure to represent various script types.

SoftwareServerAuxiliary.ScriptType(String, String, String, String, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptType

Class constructor.

SoftwareServerAuxiliary.ScriptType(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptType

Class constructor.

SoftwareServerAuxiliary.ScriptTypes - Class in edu.illinois.ncsa.isda.softwareserver

A structure to represent various script types.

SoftwareServerAuxiliary.ScriptTypes() - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptTypes

Class constructor.

SoftwareServerAuxiliary.ScriptTypes(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.ScriptTypes

Class constructor.

SoftwareServerAuxiliary.SingleParameter - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

a single operation parameter

SoftwareServerAuxiliary.SingleParameter() - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

SoftwareServerAuxiliary.SoftwareParameters - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

SoftwareServerAuxiliary.SoftwareParameters() - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SoftwareParameters

SoftwareServerAuxiliary.Subtask - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

A structure representing a a sub-task consisting of an application, operation, input, and output.

SoftwareServerAuxiliary.Subtask(int, int, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Subtask

Class constructor.

SoftwareServerAuxiliary.Subtask - Class in edu.illinois.ncsa.isda.softwareserver

A structure representing a a sub-task consisting of an application, operation, input, and output.

SoftwareServerAuxiliary.Subtask(int, int, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Subtask

Class constructor.

SoftwareServerAuxiliary.Task - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

A task consisting of a sequence of application and operations on data.

SoftwareServerAuxiliary.Task(SoftwareServerClient) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Class constructor.

SoftwareServerAuxiliary.Task(SoftwareServerClient, String, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Class constructor, create a sequence of tasks that will allow an application to go from the input to the output format.

SoftwareServerAuxiliary.Task(Vector<SoftwareServerAuxiliary.Application>) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

Class constructor.

SoftwareServerAuxiliary.Task - Class in edu.illinois.ncsa.isda.softwareserver

A task consisting of a sequence of application and operations on data.

SoftwareServerAuxiliary.Task(SoftwareServerClient) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Class constructor.

SoftwareServerAuxiliary.Task(SoftwareServerClient, String, SoftwareServerAuxiliary.Data, SoftwareServerAuxiliary.Data) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Class constructor, create a sequence of tasks that will allow an application to go from the input to the output format.

SoftwareServerAuxiliary.Task(Vector<SoftwareServerAuxiliary.Application>) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

Class constructor.

SoftwareServerAuxiliary.TaskInfo - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

A structure storing a task name, its inputs, and its outputs.

SoftwareServerAuxiliary.TaskInfo(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.TaskInfo

Class constructor.

SoftwareServerAuxiliary.TaskInfo(SoftwareServerAuxiliary.Application, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.TaskInfo

Class constructor.

SoftwareServerAuxiliary.TaskInfo - Class in edu.illinois.ncsa.isda.softwareserver

A structure storing a task name, its inputs, and its outputs.

SoftwareServerAuxiliary.TaskInfo(String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.TaskInfo

Class constructor.

SoftwareServerAuxiliary.TaskInfo(SoftwareServerAuxiliary.Application, String) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.TaskInfo

Class constructor.

SoftwareServerClient - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

An Imposed Code Reuse client interface.

SoftwareServerClient(String, int) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Class constructor.

SoftwareServerClient(SoftwareServerClient) - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Class copy constructor.

SoftwareServerClient - Class in edu.illinois.ncsa.isda.softwareserver

A Software Server client interface.

SoftwareServerClient(String, int) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Class constructor.

SoftwareServerClient(SoftwareServerClient) - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Class copy constructor.

SoftwareServerReslet - Class in edu.illinois.ncsa.isda.softwareserver.parametrized

A restful interface for a software reuse server.

SoftwareServerReslet() - Constructor for class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerReslet

SoftwareServerRESTEasy - Class in edu.illinois.ncsa.isda.softwareserver

A restful interface for a software server.

SoftwareServerRESTEasy() - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Class constructor.

SoftwareServerRESTEasyInterface - Interface in edu.illinois.ncsa.isda.softwareserver

SoftwareServerRestlet - Class in edu.illinois.ncsa.isda.softwareserver

A restful interface for a software server.

SoftwareServerRestlet() - Constructor for class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

softwareWriteAllScripts(String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

start_time - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.RequestInformation

startFocusThief(int) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Start up an iconified JFrame for the sole purpose of stealing screen focus when needed.

startScript(String, File) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

wrap call to scriptRun

stealFocus(int) - Method in class edu.illinois.ncsa.isda.softwareserver.MonkeyScript

Steal window focus as best as possible.

stop() - Method in class edu.illinois.ncsa.isda.softwareserver.DistributedSoftwareServerRestlet

Stop the REST interface.

stop() - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Stop the REST interface.

stop() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

Stop the REST interface.

stop() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotServer

Stop the Polyglot server.

stop() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Stop the PolyglotSteward thread.

stop() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Stop the Software Server.

stop() - Static method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to stop the servlet server

stop() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRestlet

Stop the REST interface and underlying Software Server.

success - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.RequestInformation

swparameters - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

swparameters - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

T

task - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.RemoteTaskInfo

task - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.RemoteTaskInfo

taskPost(MultipartFormDataInput, String, String, UriInfo, HttpServletRequest, String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Process a file submitted to Polyglot and return a link to the produced file

taskPost(MultipartFormDataInput, String, String, UriInfo, HttpServletRequest, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasyInterface

taskPost(MultipartFormDataInput, String, String, UriInfo, String, String, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Process a file submitted to the Software Server and return a link to the produced file

taskPost(MultipartFormDataInput, String, String, UriInfo, String, String, String) - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

tasks() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Used to know the number of task processed since the server starts

tasks() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

text - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.Point2D

timings(int, int, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

timings(int, int, int) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2

tjws - Static variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

tjws - Static variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Application

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Data

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FormatParameters

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Operation

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.OperationParameters

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.RemoteTaskInfo

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

toString(int) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

display parameters selected (for debug purposes)

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Task

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.TaskInfo

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Return a string representation of this object.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel_JUNG.UniqueString

Return the string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.FileInformation

Convert this class to a string.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.RequestInformation

Return a string representation of the Polyglot request information.

toString(Collection<String>) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Convert a Collection of strings to a line separated list of strings.

toString(Collection<String>) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

Convert a Collection of strings to a line separated list of strings.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Application

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Data

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Operation

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.RemoteTaskInfo

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Task

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.TaskInfo

Get a string representation of this instance.

toString() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Return a string representation of this object.

toString_old(int) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

display parameters selected (for debug purposes)

transform(V) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel_JUNG.ToAbbreviatedStringLabeller

Transform a vertex to a string.

transformEdgeWeights(String) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraph

Transform edge weights according to the given expression.

type - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

type - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

types - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.Script

types - Variable in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.Script

U

uncache(int, String) - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.CachedFileData

Retrieve the file data from the cache.

uncache(int, String) - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.CachedFileData

Retrieve the file data from the cache.

UNKNOWN_WEIGHT - Static variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.Conversion2

unload() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.FileData

Clear stored data.

unload() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerAuxiliary.FileData

Clear stored data.

updateMongo() - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Push logged information to mongo.

updateMongo(PolyglotAuxiliary.RequestInformation) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRESTEasy

Push request information to mongo.

updateMongo() - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

Push logged information to mongo.

updateMongo(PolyglotAuxiliary.RequestInformation) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotRestlet

Push request information to mongo.

updateOutputFormats() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotWebInterface

Update and write out available output formats.

uploadFile(String, File) - Static method in class edu.illinois.ncsa.isda.softwareserver.polyglot.VersusServiceCompare

useWeights(boolean) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.weighted.IOGraph2Panel

V

value - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.SingleParameter

valueChanged(TreeSelectionEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphPanel

The tree selection listener used to handle selections in the side tree.

valueChanged(TreeSelectionEvent) - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.IOGraphWeightsTool

Handle selection events from the side JTree.

version - Variable in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerAuxiliary.ScriptHeader

VersusCompare - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

A small program to compare two files using the Versus library.

VersusCompare() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.VersusCompare

VersusServiceCompare - Class in edu.illinois.ncsa.isda.softwareserver.polyglot

VersusServiceCompare() - Constructor for class edu.illinois.ncsa.isda.softwareserver.polyglot.VersusServiceCompare

W

waitOnPending() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServerClient

Wait for all pending asynchronous calls to complete.

waitOnPending() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.Polyglot

Wait for all pending asynchronous calls to complete.

waitOnPending() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerClient

Wait for all pending asynchronous calls to complete.

waitUntilRunning() - Method in class edu.illinois.ncsa.isda.softwareserver.parametrized.SoftwareServer

Wait until the servers main thread is running.

waitUntilRunning() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Wait until the servers main thread is running.

waitUntilStopped() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotServer

Wait until the servers main thread stops.

waitUntilStopped() - Method in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotSteward

Wait until the steward's threads have stopped.

waitUntilStopped() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServer

Wait until the servers main thread stops.

WelcomeToSoftwareServer() - Method in class edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasy

Returns SoftwareServer greetings

WelcomeToSoftwareServer() - Method in interface edu.illinois.ncsa.isda.softwareserver.SoftwareServerRESTEasyInterface

writeScript(String, String) - Static method in class edu.illinois.ncsa.isda.softwareserver.AHKScriptBuilder

loops over all input files to build the script - it assumes that the file #0 will have the "run" command

X

x - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.Point2D

Y

y - Variable in class edu.illinois.ncsa.isda.softwareserver.polyglot.PolyglotAuxiliary.Point2D

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