Build: #3 was successful
Job: Default Job was successful
Build log
The build generated 578 lines of output. Download or view full build log.
| 13-Apr-2017 11:23:45 | Build Clowder - extractors-msc - master - Default Job #3 (CATS-MSC1-JOB1-3) started building on agent buildserver-1.os.ncsa.edu |
| 13-Apr-2017 11:23:45 | Remote agent on host buildserver-1.os.ncsa.edu |
| 13-Apr-2017 11:23:45 | Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1 |
| 13-Apr-2017 11:23:45 | Executing build Clowder - extractors-msc - master - Default Job #3 (CATS-MSC1-JOB1-3) |
| 13-Apr-2017 11:23:45 | Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' |
| 13-Apr-2017 11:23:45 | Updating source code to revision: 6aaab3692bc88bb1c0016521723c45399615c5f2 |
| 13-Apr-2017 11:23:45 | Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1/.git'. |
| 13-Apr-2017 11:23:45 | Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1/.git/ |
| 13-Apr-2017 11:23:45 | Fetching 'refs/heads/master' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git'. Will try to do a shallow fetch. |
| 13-Apr-2017 11:23:45 | Warning: Permanently added '[127.0.0.1]:45799' (RSA) to the list of known hosts. |
| 13-Apr-2017 11:23:46 | From ssh://127.0.0.1:45799/cats/extractors-msc |
| 13-Apr-2017 11:23:46 | * [new branch] master -> master |
| 13-Apr-2017 11:23:46 | Checking out revision 6aaab3692bc88bb1c0016521723c45399615c5f2. |
| 13-Apr-2017 11:23:46 | Already on 'master' |
| 13-Apr-2017 11:23:46 | Updated source code to revision: 6aaab3692bc88bb1c0016521723c45399615c5f2 |
| 13-Apr-2017 11:23:46 | Finished task 'Checkout Default Repository' with result: Success |
| 13-Apr-2017 11:23:46 | Running pre-build action: VCS Version Collector |
| 13-Apr-2017 11:23:46 | Starting task 'docker build' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' |
| 13-Apr-2017 11:23:46 | Beginning to execute external process for build 'Clowder - extractors-msc - master - Default Job #3 (CATS-MSC1-JOB1-3)' ... running command line: /bin/sh docker.sh ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1 ... using extra environment variables: bamboo_planRepository_1_branch=master bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster bamboo_planRepository_1_branchDisplayName=master bamboo_repository_revision_number=6aaab3692bc88bb1c0016521723c45399615c5f2 bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-MSC1-JOB1-3 bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build bamboo_planRepository_1_name=extractors-msc bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1 bamboo_buildKey=CATS-MSC1-JOB1 bamboo_capability_system_os=linux bamboo_shortPlanName=master bamboo_repository_127172629_branch_name=master bamboo_planRepository_name=extractors-msc bamboo_buildNumber=3 bamboo_repository_127172629_git_username= bamboo_shortJobName=Default Job bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-MSC1-JOB1-3 bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git bamboo_agentId=140673027 bamboo_planName=Clowder - extractors-msc - master bamboo_shortPlanKey=MSC1 bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt bamboo_repository_127172629_git_branch=master bamboo_shortJobKey=JOB1 bamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node bamboo_repository_127172629_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git bamboo_repository_127172629_name=extractors-msc bamboo_planRepository_revision=6aaab3692bc88bb1c0016521723c45399615c5f2 bamboo_repository_previous_revision_number=85e47c135cd2d896597c8dd58362bfc12d4463d0 bamboo_buildTimeStamp=2017-04-13T11:23:45.044-05:00 bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm bamboo_planRepository_previousRevision=85e47c135cd2d896597c8dd58362bfc12d4463d0 bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1 bamboo_buildResultKey=CATS-MSC1-JOB1-3 bamboo_repository_git_branch=master bamboo_repository_branch_name=master bamboo_buildPlanName=Clowder - extractors-msc - master - Default Job bamboo_planRepository_1_revision=6aaab3692bc88bb1c0016521723c45399615c5f2 bamboo_capability_system_builder_command_python3=/usr/bin/python3 bamboo_repository_name=extractors-msc bamboo_capability_system_docker_executable=/usr/bin/docker bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt bamboo_planRepository_branch=master bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir bamboo_capability_system_git_executable=/usr/bin/git bamboo_planRepository_1_previousRevision=85e47c135cd2d896597c8dd58362bfc12d4463d0 bamboo_repository_git_username= bamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13 bamboo_planRepository_branchDisplayName=master bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs bamboo_planRepository_1_type=bbserver bamboo_planRepository_branchName=master bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7 bamboo_repository_127172629_previous_revision_number=85e47c135cd2d896597c8dd58362bfc12d4463d0 bamboo_capability_system_hostname=buildserver-1 bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66 bamboo_capability_system_software_mongo=/usr/bin/mongo bamboo_plan_storageTag=plan-126976039 bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs bamboo_planRepository_type=bbserver bamboo_planRepository_1_username= bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66 bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4 bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9 bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-MSC1-JOB1 bamboo_planKey=CATS-MSC1 bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/extractors-msc.git bamboo_planRepository_username= bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66 bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41 bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60 bamboo_planRepository_1_branchName=master bamboo_repository_127172629_revision_number=6aaab3692bc88bb1c0016521723c45399615c5f2 |
| 13-Apr-2017 11:23:47 | Sending build context to Docker daemon 2.284 MB |
| 13-Apr-2017 11:23:47 | |
| 13-Apr-2017 11:23:47 | Step 1/11 : FROM clowder/pyclowder:1 |
| 13-Apr-2017 11:23:47 | ---> 2dd17798784b |
| 13-Apr-2017 11:23:47 | Step 2/11 : MAINTAINER Rob Kooper <kooper@illinois.edu> |
| 13-Apr-2017 11:23:47 | ---> Using cache |
| 13-Apr-2017 11:23:47 | ---> 25d6b5080f64 |
| 13-Apr-2017 11:23:47 | Step 3/11 : VOLUME /matlab |
| 13-Apr-2017 11:23:47 | ---> Using cache |
| 13-Apr-2017 11:23:47 | ---> ede0a0d3c320 |
| 13-Apr-2017 11:23:47 | Step 4/11 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.diagnosis" MATLAB_BINARY "/matlab/bin/matlab" MAIN_SCRIPT "diagnosis.py" |
| 13-Apr-2017 11:23:47 | ---> Using cache |
| 13-Apr-2017 11:23:47 | ---> e41d78828e2e |
| 13-Apr-2017 11:23:47 | Step 5/11 : USER root |
| 13-Apr-2017 11:23:47 | ---> Using cache |
| 13-Apr-2017 11:23:47 | ---> d0c45edca894 |
| 13-Apr-2017 11:23:47 | Step 6/11 : RUN pip install --upgrade pip |
| 13-Apr-2017 11:23:47 | ---> Using cache |
| 13-Apr-2017 11:23:47 | ---> d21763e96731 |
| 13-Apr-2017 11:23:47 | Step 7/11 : RUN apt-get -qq -y update && apt-get -y install libxext6 libxmu6 libxt6 wget && mkdir -p /matlab && rm -rf /var/lib/apt/lists/* |
| 13-Apr-2017 11:23:47 | ---> Using cache |
| 13-Apr-2017 11:23:47 | ---> fbbb991f9177 |
| 13-Apr-2017 11:23:47 | Step 8/11 : USER clowder |
| 13-Apr-2017 11:23:47 | ---> Using cache |
| 13-Apr-2017 11:23:47 | ---> 0e2b3727481d |
| 13-Apr-2017 11:23:47 | Step 9/11 : COPY entrypoint.sh *.py *.m data/*.mat *.json /home/clowder/ |
| 13-Apr-2017 11:23:48 | ---> 9d05d0a68672 |
| 13-Apr-2017 11:23:48 | Removing intermediate container 2b81eb939f5d |
| 13-Apr-2017 11:23:48 | Step 10/11 : ENTRYPOINT /home/clowder/entrypoint.sh |
| 13-Apr-2017 11:23:48 | ---> Running in 3d71baa6ac86 |
| 13-Apr-2017 11:23:48 | ---> 59143dc46d67 |
| 13-Apr-2017 11:23:48 | Removing intermediate container 3d71baa6ac86 |
| 13-Apr-2017 11:23:48 | Step 11/11 : CMD extractor |
| 13-Apr-2017 11:23:48 | ---> Running in 489aa01f9b5d |
| 13-Apr-2017 11:23:48 | ---> 9e981d09e7cd |
| 13-Apr-2017 11:23:49 | Removing intermediate container 489aa01f9b5d |
| 13-Apr-2017 11:23:49 | Successfully built 9e981d09e7cd |
| 13-Apr-2017 11:23:49 | The push refers to a repository [docker.io/clowder/extractors-msc-kidney] |
| 13-Apr-2017 11:23:49 | e14b7f0f2b41: Preparing |
| 13-Apr-2017 11:23:49 | f7012088fb0f: Preparing |
| 13-Apr-2017 11:23:49 | fad976092c90: Preparing |
| 13-Apr-2017 11:23:49 | 5e269aa11a2f: Preparing |
| 13-Apr-2017 11:23:49 | 7d760664bbad: Preparing |
| 13-Apr-2017 11:23:49 | a2688f6622a7: Preparing |
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| 13-Apr-2017 11:23:49 | 5eb5bd4c5014: Preparing |
| 13-Apr-2017 11:23:49 | d195a7a18c70: Preparing |
| 13-Apr-2017 11:23:49 | af605e724c5a: Preparing |
| 13-Apr-2017 11:23:49 | a2688f6622a7: Waiting |
| 13-Apr-2017 11:23:49 | 59f161c3069d: Preparing |
| 13-Apr-2017 11:23:49 | 4f03495a4d7d: Preparing |
| 13-Apr-2017 11:23:49 | e24a372680fc: Waiting |
| 13-Apr-2017 11:23:49 | af605e724c5a: Waiting |
| 13-Apr-2017 11:23:49 | 5eb5bd4c5014: Waiting |
| 13-Apr-2017 11:23:49 | d195a7a18c70: Waiting |
| 13-Apr-2017 11:23:49 | 4f03495a4d7d: Waiting |
| 13-Apr-2017 11:23:49 | 5e269aa11a2f: Mounted from clowder/extractors-geo-tiff |
| 13-Apr-2017 11:23:50 | 7d760664bbad: Mounted from clowder/extractors-geo-tiff |
| 13-Apr-2017 11:23:50 | a2688f6622a7: Mounted from clowder/extractors-geo-tiff |
| 13-Apr-2017 11:23:50 | e24a372680fc: Mounted from clowder/extractors-geo-tiff |
| 13-Apr-2017 11:23:50 | 5eb5bd4c5014: Mounted from clowder/extractors-geo-tiff |
| 13-Apr-2017 11:23:51 | d195a7a18c70: Mounted from clowder/extractors-geo-tiff |
| 13-Apr-2017 11:23:51 | e14b7f0f2b41: Pushed |
| 13-Apr-2017 11:23:51 | f7012088fb0f: Pushed |
| 13-Apr-2017 11:23:52 | 59f161c3069d: Mounted from clowder/extractors-geo-tiff |
| 13-Apr-2017 11:23:52 | 4f03495a4d7d: Mounted from clowder/extractors-geo-tiff |
| 13-Apr-2017 11:23:52 | fad976092c90: Pushed |
| 13-Apr-2017 11:23:54 | af605e724c5a: Mounted from clowder/extractors-geo-tiff |
| 13-Apr-2017 11:23:57 | master: digest: sha256:43972a77b756b511332846697c3628c07d35d8617ae36ae34533b9df5407ef39 size: 2826 |
| 13-Apr-2017 11:23:57 | The push refers to a repository [docker.io/clowder/extractors-msc-kidney] |
| 13-Apr-2017 11:23:57 | e14b7f0f2b41: Preparing |
| 13-Apr-2017 11:23:57 | f7012088fb0f: Preparing |
| 13-Apr-2017 11:23:57 | fad976092c90: Preparing |
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| 13-Apr-2017 11:23:57 | af605e724c5a: Preparing |
| 13-Apr-2017 11:23:57 | 59f161c3069d: Preparing |
| 13-Apr-2017 11:23:57 | 4f03495a4d7d: Preparing |
| 13-Apr-2017 11:23:57 | d195a7a18c70: Waiting |
| 13-Apr-2017 11:23:57 | af605e724c5a: Waiting |
| 13-Apr-2017 11:23:57 | a2688f6622a7: Waiting |
| 13-Apr-2017 11:23:57 | e24a372680fc: Waiting |
| 13-Apr-2017 11:23:57 | 5eb5bd4c5014: Waiting |
| 13-Apr-2017 11:23:57 | 4f03495a4d7d: Waiting |
| 13-Apr-2017 11:23:57 | 7d760664bbad: Layer already exists |
| 13-Apr-2017 11:23:57 | fad976092c90: Layer already exists |
| 13-Apr-2017 11:23:57 | f7012088fb0f: Layer already exists |
| 13-Apr-2017 11:23:57 | 5e269aa11a2f: Layer already exists |
| 13-Apr-2017 11:23:57 | e14b7f0f2b41: Layer already exists |
| 13-Apr-2017 11:23:57 | af605e724c5a: Layer already exists |
| 13-Apr-2017 11:23:57 | e24a372680fc: Layer already exists |
| 13-Apr-2017 11:23:57 | d195a7a18c70: Layer already exists |
| 13-Apr-2017 11:23:57 | a2688f6622a7: Layer already exists |
| 13-Apr-2017 11:23:57 | 5eb5bd4c5014: Layer already exists |
| 13-Apr-2017 11:23:58 | 59f161c3069d: Layer already exists |
| 13-Apr-2017 11:23:58 | 4f03495a4d7d: Layer already exists |
| 13-Apr-2017 11:23:58 | latest: digest: sha256:43972a77b756b511332846697c3628c07d35d8617ae36ae34533b9df5407ef39 size: 2826 |
| 13-Apr-2017 11:23:58 | Untagged: 13148:latest |
| 13-Apr-2017 11:23:58 | Sending build context to Docker daemon 67.07 kB |
| 13-Apr-2017 11:23:58 | |
| 13-Apr-2017 11:23:58 | Step 1/11 : FROM clowder/pyclowder:1 |
| 13-Apr-2017 11:23:58 | ---> 2dd17798784b |
| 13-Apr-2017 11:23:58 | Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu> |
| 13-Apr-2017 11:23:58 | ---> Using cache |
| 13-Apr-2017 11:23:58 | ---> bc9047907227 |
| 13-Apr-2017 11:23:58 | Step 3/11 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.IsletExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Islet.py" |
| 13-Apr-2017 11:23:58 | ---> Using cache |
| 13-Apr-2017 11:23:58 | ---> 9ceb63774634 |
| 13-Apr-2017 11:23:58 | Step 4/11 : USER root |
| 13-Apr-2017 11:23:58 | ---> Using cache |
| 13-Apr-2017 11:23:58 | ---> ba9cdcd753c0 |
| 13-Apr-2017 11:23:58 | Step 5/11 : COPY requirements.txt /home/clowder/ |
| 13-Apr-2017 11:23:58 | ---> Using cache |
| 13-Apr-2017 11:23:58 | ---> db24dd66192d |
| 13-Apr-2017 11:23:58 | Step 6/11 : RUN pip install --upgrade pip |
| 13-Apr-2017 11:23:58 | ---> Using cache |
| 13-Apr-2017 11:23:58 | ---> d5975c0da0d8 |
| 13-Apr-2017 11:23:58 | Step 7/11 : RUN pip install -r /home/clowder/requirements.txt |
| 13-Apr-2017 11:23:58 | ---> Using cache |
| 13-Apr-2017 11:23:58 | ---> 9dc5b4d4fd4c |
| 13-Apr-2017 11:23:58 | Step 8/11 : USER clowder |
| 13-Apr-2017 11:23:58 | ---> Using cache |
| 13-Apr-2017 11:23:58 | ---> 4574e4c8d885 |
| 13-Apr-2017 11:23:58 | Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/ |
| 13-Apr-2017 11:23:59 | ---> c1d774007e13 |
| 13-Apr-2017 11:23:59 | Removing intermediate container 58be289dc481 |
| 13-Apr-2017 11:23:59 | Step 10/11 : ENTRYPOINT /home/clowder/entrypoint.sh |
| 13-Apr-2017 11:23:59 | ---> Running in 18f9dd2363c5 |
| 13-Apr-2017 11:23:59 | ---> a9304997b6b0 |
| 13-Apr-2017 11:23:59 | Removing intermediate container 18f9dd2363c5 |
| 13-Apr-2017 11:23:59 | Step 11/11 : CMD extractor |
| 13-Apr-2017 11:23:59 | ---> Running in ff5e99d9c020 |
| 13-Apr-2017 11:23:59 | ---> 784fa9def69a |
| 13-Apr-2017 11:23:59 | Removing intermediate container ff5e99d9c020 |
| 13-Apr-2017 11:23:59 | Successfully built 784fa9def69a |
| 13-Apr-2017 11:23:59 | The push refers to a repository [docker.io/clowder/extractors-msc-islet] |
| 13-Apr-2017 11:24:00 | 1b67db9566db: Preparing |
| 13-Apr-2017 11:24:00 | 8e498a665c7d: Preparing |
| 13-Apr-2017 11:24:00 | 7c7c71d2f9d6: Preparing |
| 13-Apr-2017 11:24:00 | 327cd9a955a7: Preparing |
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| 13-Apr-2017 11:24:00 | a2688f6622a7: Preparing |
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| 13-Apr-2017 11:24:00 | 5eb5bd4c5014: Preparing |
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| 13-Apr-2017 11:24:00 | 4f03495a4d7d: Preparing |
| 13-Apr-2017 11:24:00 | 5eb5bd4c5014: Waiting |
| 13-Apr-2017 11:24:00 | d195a7a18c70: Waiting |
| 13-Apr-2017 11:24:00 | af605e724c5a: Waiting |
| 13-Apr-2017 11:24:00 | 59f161c3069d: Waiting |
| 13-Apr-2017 11:24:00 | 4f03495a4d7d: Waiting |
| 13-Apr-2017 11:24:00 | e24a372680fc: Waiting |
| 13-Apr-2017 11:24:00 | a2688f6622a7: Waiting |
| 13-Apr-2017 11:24:00 | 5e269aa11a2f: Mounted from clowder/extractors-msc-kidney |
| 13-Apr-2017 11:24:01 | 7d760664bbad: Mounted from clowder/extractors-msc-kidney |
| 13-Apr-2017 11:24:01 | 1b67db9566db: Pushed |
| 13-Apr-2017 11:24:01 | a2688f6622a7: Mounted from clowder/extractors-msc-kidney |
| 13-Apr-2017 11:24:01 | e24a372680fc: Mounted from clowder/extractors-msc-kidney |
| 13-Apr-2017 11:24:01 | 327cd9a955a7: Pushed |
| 13-Apr-2017 11:24:02 | d195a7a18c70: Mounted from clowder/extractors-msc-kidney |
| 13-Apr-2017 11:24:02 | 5eb5bd4c5014: Mounted from clowder/extractors-msc-kidney |
| 13-Apr-2017 11:24:02 | af605e724c5a: Mounted from clowder/extractors-msc-kidney |
| 13-Apr-2017 11:24:02 | 59f161c3069d: Mounted from clowder/extractors-msc-kidney |
| 13-Apr-2017 11:24:02 | 4f03495a4d7d: Mounted from clowder/extractors-msc-kidney |
| 13-Apr-2017 11:24:03 | 8e498a665c7d: Pushed |
| 13-Apr-2017 11:24:03 | 7c7c71d2f9d6: Pushed |
| 13-Apr-2017 11:24:06 | master: digest: sha256:fdc07b39f1b2ff11d947eed7e38fbd710b48686ab4e4f3f8571bcbf89c1ab2d3 size: 3031 |
| 13-Apr-2017 11:24:06 | The push refers to a repository [docker.io/clowder/extractors-msc-islet] |
| 13-Apr-2017 11:24:06 | 1b67db9566db: Preparing |
| 13-Apr-2017 11:24:06 | 8e498a665c7d: Preparing |
| 13-Apr-2017 11:24:06 | 7c7c71d2f9d6: Preparing |
| 13-Apr-2017 11:24:06 | 327cd9a955a7: Preparing |
| 13-Apr-2017 11:24:06 | 5e269aa11a2f: Preparing |
| 13-Apr-2017 11:24:06 | 7d760664bbad: Preparing |
| 13-Apr-2017 11:24:06 | a2688f6622a7: Preparing |
| 13-Apr-2017 11:24:06 | e24a372680fc: Preparing |
| 13-Apr-2017 11:24:06 | 5eb5bd4c5014: Preparing |
| 13-Apr-2017 11:24:06 | d195a7a18c70: Preparing |
| 13-Apr-2017 11:24:06 | af605e724c5a: Preparing |
| 13-Apr-2017 11:24:06 | 59f161c3069d: Preparing |
| 13-Apr-2017 11:24:06 | 4f03495a4d7d: Preparing |
| 13-Apr-2017 11:24:06 | e24a372680fc: Waiting |
| 13-Apr-2017 11:24:06 | 5eb5bd4c5014: Waiting |
| 13-Apr-2017 11:24:06 | d195a7a18c70: Waiting |
| 13-Apr-2017 11:24:06 | af605e724c5a: Waiting |
| 13-Apr-2017 11:24:06 | 59f161c3069d: Waiting |
| 13-Apr-2017 11:24:06 | 4f03495a4d7d: Waiting |
| 13-Apr-2017 11:24:06 | 7d760664bbad: Waiting |
| 13-Apr-2017 11:24:06 | a2688f6622a7: Waiting |
| 13-Apr-2017 11:24:06 | 8e498a665c7d: Layer already exists |
| 13-Apr-2017 11:24:06 | 5e269aa11a2f: Layer already exists |
| 13-Apr-2017 11:24:06 | 1b67db9566db: Layer already exists |
| 13-Apr-2017 11:24:06 | 327cd9a955a7: Layer already exists |
| 13-Apr-2017 11:24:06 | 7c7c71d2f9d6: Layer already exists |
| 13-Apr-2017 11:24:06 | a2688f6622a7: Layer already exists |
| 13-Apr-2017 11:24:06 | e24a372680fc: Layer already exists |
| 13-Apr-2017 11:24:06 | 7d760664bbad: Layer already exists |
| 13-Apr-2017 11:24:06 | d195a7a18c70: Layer already exists |
| 13-Apr-2017 11:24:06 | 5eb5bd4c5014: Layer already exists |
| 13-Apr-2017 11:24:06 | af605e724c5a: Layer already exists |
| 13-Apr-2017 11:24:06 | 59f161c3069d: Layer already exists |
| 13-Apr-2017 11:24:06 | 4f03495a4d7d: Layer already exists |
| 13-Apr-2017 11:24:07 | latest: digest: sha256:fdc07b39f1b2ff11d947eed7e38fbd710b48686ab4e4f3f8571bcbf89c1ab2d3 size: 3031 |
| 13-Apr-2017 11:24:07 | Untagged: 13148:latest |
| 13-Apr-2017 11:24:07 | Sending build context to Docker daemon 66.05 kB |
| 13-Apr-2017 11:24:07 | |
| 13-Apr-2017 11:24:07 | Step 1/11 : FROM clowder/pyclowder:1 |
| 13-Apr-2017 11:24:07 | ---> 2dd17798784b |
| 13-Apr-2017 11:24:07 | Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu> |
| 13-Apr-2017 11:24:07 | ---> Using cache |
| 13-Apr-2017 11:24:07 | ---> bc9047907227 |
| 13-Apr-2017 11:24:07 | Step 3/11 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.ChemCBCExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Chem.py" |
| 13-Apr-2017 11:24:07 | ---> Using cache |
| 13-Apr-2017 11:24:07 | ---> f9533b555a2c |
| 13-Apr-2017 11:24:07 | Step 4/11 : USER root |
| 13-Apr-2017 11:24:07 | ---> Using cache |
| 13-Apr-2017 11:24:07 | ---> e895b7bbafa3 |
| 13-Apr-2017 11:24:07 | Step 5/11 : COPY requirements.txt /home/clowder/ |
| 13-Apr-2017 11:24:07 | ---> Using cache |
| 13-Apr-2017 11:24:07 | ---> bd4cac8f5785 |
| 13-Apr-2017 11:24:07 | Step 6/11 : RUN pip install --upgrade pip |
| 13-Apr-2017 11:24:07 | ---> Using cache |
| 13-Apr-2017 11:24:07 | ---> 3a830dd14194 |
| 13-Apr-2017 11:24:07 | Step 7/11 : RUN pip install -r /home/clowder/requirements.txt |
| 13-Apr-2017 11:24:07 | ---> Using cache |
| 13-Apr-2017 11:24:07 | ---> a3fab8f49c15 |
| 13-Apr-2017 11:24:07 | Step 8/11 : USER clowder |
| 13-Apr-2017 11:24:07 | ---> Using cache |
| 13-Apr-2017 11:24:07 | ---> 3b2a96fa0433 |
| 13-Apr-2017 11:24:07 | Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/ |
| 13-Apr-2017 11:24:08 | ---> 180926de3ff2 |
| 13-Apr-2017 11:24:08 | Removing intermediate container bf88c9195515 |
| 13-Apr-2017 11:24:08 | Step 10/11 : ENTRYPOINT /home/clowder/entrypoint.sh |
| 13-Apr-2017 11:24:08 | ---> Running in c4ceadb94f8c |
| 13-Apr-2017 11:24:08 | ---> b06a54f1e451 |
| 13-Apr-2017 11:24:08 | Removing intermediate container c4ceadb94f8c |
| 13-Apr-2017 11:24:08 | Step 11/11 : CMD extractor |
| 13-Apr-2017 11:24:08 | ---> Running in 9b03b09fc4ac |
| 13-Apr-2017 11:24:08 | ---> d3b265d4848a |
| 13-Apr-2017 11:24:08 | Removing intermediate container 9b03b09fc4ac |
| 13-Apr-2017 11:24:08 | Successfully built d3b265d4848a |
| 13-Apr-2017 11:24:08 | The push refers to a repository [docker.io/clowder/extractors-msc-chemcbc] |
| 13-Apr-2017 11:24:08 | 547f2efd0d66: Preparing |
| 13-Apr-2017 11:24:08 | b55df840f97d: Preparing |
| 13-Apr-2017 11:24:08 | ad97842ae705: Preparing |
| 13-Apr-2017 11:24:08 | a0145b94122b: Preparing |
| 13-Apr-2017 11:24:08 | 5e269aa11a2f: Preparing |
| 13-Apr-2017 11:24:08 | 7d760664bbad: Preparing |
| 13-Apr-2017 11:24:08 | a2688f6622a7: Preparing |
| 13-Apr-2017 11:24:08 | e24a372680fc: Preparing |
| 13-Apr-2017 11:24:08 | 5eb5bd4c5014: Preparing |
| 13-Apr-2017 11:24:08 | d195a7a18c70: Preparing |
| 13-Apr-2017 11:24:08 | af605e724c5a: Preparing |
| 13-Apr-2017 11:24:08 | 59f161c3069d: Preparing |
| 13-Apr-2017 11:24:08 | 4f03495a4d7d: Preparing |
| 13-Apr-2017 11:24:08 | 7d760664bbad: Waiting |
| 13-Apr-2017 11:24:08 | a2688f6622a7: Waiting |
| 13-Apr-2017 11:24:08 | e24a372680fc: Waiting |
| 13-Apr-2017 11:24:08 | 5eb5bd4c5014: Waiting |
| 13-Apr-2017 11:24:08 | d195a7a18c70: Waiting |
| 13-Apr-2017 11:24:08 | af605e724c5a: Waiting |
| 13-Apr-2017 11:24:08 | 59f161c3069d: Waiting |
| 13-Apr-2017 11:24:08 | 4f03495a4d7d: Waiting |
| 13-Apr-2017 11:24:09 | 5e269aa11a2f: Mounted from clowder/extractors-msc-islet |
| 13-Apr-2017 11:24:10 | 7d760664bbad: Mounted from clowder/extractors-msc-islet |
| 13-Apr-2017 11:24:10 | a2688f6622a7: Mounted from clowder/extractors-msc-islet |
| 13-Apr-2017 11:24:10 | 547f2efd0d66: Pushed |
| 13-Apr-2017 11:24:10 | a0145b94122b: Pushed |
| 13-Apr-2017 11:24:11 | e24a372680fc: Mounted from clowder/extractors-msc-islet |
| 13-Apr-2017 11:24:11 | d195a7a18c70: Mounted from clowder/extractors-msc-islet |
| 13-Apr-2017 11:24:11 | b55df840f97d: Pushed |
| 13-Apr-2017 11:24:11 | 5eb5bd4c5014: Mounted from clowder/extractors-msc-islet |
| 13-Apr-2017 11:24:11 | af605e724c5a: Mounted from clowder/extractors-msc-islet |
| 13-Apr-2017 11:24:11 | 59f161c3069d: Mounted from clowder/extractors-msc-islet |
| 13-Apr-2017 11:24:11 | ad97842ae705: Pushed |
| 13-Apr-2017 11:24:11 | 4f03495a4d7d: Mounted from clowder/extractors-msc-islet |
| 13-Apr-2017 11:24:13 | master: digest: sha256:ff341a4c44e6956d0d1d2429595b337f8503d8f13c8b7761978ada9feed1aa3b size: 3031 |
| 13-Apr-2017 11:24:13 | The push refers to a repository [docker.io/clowder/extractors-msc-chemcbc] |
| 13-Apr-2017 11:24:13 | 547f2efd0d66: Preparing |
| 13-Apr-2017 11:24:13 | b55df840f97d: Preparing |
| 13-Apr-2017 11:24:13 | ad97842ae705: Preparing |
| 13-Apr-2017 11:24:13 | a0145b94122b: Preparing |
| 13-Apr-2017 11:24:13 | 5e269aa11a2f: Preparing |
| 13-Apr-2017 11:24:13 | 7d760664bbad: Preparing |
| 13-Apr-2017 11:24:13 | a2688f6622a7: Preparing |
| 13-Apr-2017 11:24:13 | e24a372680fc: Preparing |
| 13-Apr-2017 11:24:13 | 5eb5bd4c5014: Preparing |
| 13-Apr-2017 11:24:13 | d195a7a18c70: Preparing |
| 13-Apr-2017 11:24:13 | af605e724c5a: Preparing |
| 13-Apr-2017 11:24:13 | 59f161c3069d: Preparing |
| 13-Apr-2017 11:24:13 | 4f03495a4d7d: Preparing |
| 13-Apr-2017 11:24:13 | 7d760664bbad: Waiting |
| 13-Apr-2017 11:24:13 | a2688f6622a7: Waiting |
| 13-Apr-2017 11:24:13 | e24a372680fc: Waiting |
| 13-Apr-2017 11:24:13 | 5eb5bd4c5014: Waiting |
| 13-Apr-2017 11:24:13 | d195a7a18c70: Waiting |
| 13-Apr-2017 11:24:13 | af605e724c5a: Waiting |
| 13-Apr-2017 11:24:13 | 59f161c3069d: Waiting |
| 13-Apr-2017 11:24:14 | 5e269aa11a2f: Layer already exists |
| 13-Apr-2017 11:24:14 | ad97842ae705: Layer already exists |
| 13-Apr-2017 11:24:14 | b55df840f97d: Layer already exists |
| 13-Apr-2017 11:24:14 | 547f2efd0d66: Layer already exists |
| 13-Apr-2017 11:24:14 | a0145b94122b: Layer already exists |
| 13-Apr-2017 11:24:14 | 7d760664bbad: Layer already exists |
| 13-Apr-2017 11:24:14 | a2688f6622a7: Layer already exists |
| 13-Apr-2017 11:24:14 | e24a372680fc: Layer already exists |
| 13-Apr-2017 11:24:14 | 5eb5bd4c5014: Layer already exists |
| 13-Apr-2017 11:24:14 | d195a7a18c70: Layer already exists |
| 13-Apr-2017 11:24:14 | af605e724c5a: Layer already exists |
| 13-Apr-2017 11:24:14 | 59f161c3069d: Layer already exists |
| 13-Apr-2017 11:24:14 | 4f03495a4d7d: Layer already exists |
| 13-Apr-2017 11:24:14 | latest: digest: sha256:ff341a4c44e6956d0d1d2429595b337f8503d8f13c8b7761978ada9feed1aa3b size: 3031 |
| 13-Apr-2017 11:24:15 | Untagged: 13148:latest |
| 13-Apr-2017 11:24:15 | Sending build context to Docker daemon 198.1 kB |
| 13-Apr-2017 11:24:15 | |
| 13-Apr-2017 11:24:15 | Step 1/11 : FROM clowder/pyclowder:1 |
| 13-Apr-2017 11:24:15 | ---> 2dd17798784b |
| 13-Apr-2017 11:24:15 | Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu> |
| 13-Apr-2017 11:24:15 | ---> Using cache |
| 13-Apr-2017 11:24:15 | ---> bc9047907227 |
| 13-Apr-2017 11:24:15 | Step 3/11 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.MonitorExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Monitor.py" |
| 13-Apr-2017 11:24:15 | ---> Using cache |
| 13-Apr-2017 11:24:15 | ---> b661a0041567 |
| 13-Apr-2017 11:24:15 | Step 4/11 : USER root |
| 13-Apr-2017 11:24:15 | ---> Using cache |
| 13-Apr-2017 11:24:15 | ---> e7bc66966044 |
| 13-Apr-2017 11:24:15 | Step 5/11 : COPY requirements.txt /home/clowder/ |
| 13-Apr-2017 11:24:15 | ---> Using cache |
| 13-Apr-2017 11:24:15 | ---> 3ec5ab59c61d |
| 13-Apr-2017 11:24:15 | Step 6/11 : RUN pip install --upgrade pip |
| 13-Apr-2017 11:24:15 | ---> Using cache |
| 13-Apr-2017 11:24:15 | ---> 89e0ef8225af |
| 13-Apr-2017 11:24:15 | Step 7/11 : RUN pip install -r /home/clowder/requirements.txt |
| 13-Apr-2017 11:24:15 | ---> Using cache |
| 13-Apr-2017 11:24:15 | ---> 6170f134661c |
| 13-Apr-2017 11:24:15 | Step 8/11 : USER clowder |
| 13-Apr-2017 11:24:15 | ---> Using cache |
| 13-Apr-2017 11:24:15 | ---> d72ea4deba96 |
| 13-Apr-2017 11:24:15 | Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/ |
| 13-Apr-2017 11:24:15 | ---> 0267abc16a58 |
| 13-Apr-2017 11:24:15 | Removing intermediate container dbd71df7ea1f |
| 13-Apr-2017 11:24:15 | Step 10/11 : ENTRYPOINT /home/clowder/entrypoint.sh |
| 13-Apr-2017 11:24:16 | ---> Running in b55f23cdab57 |
| 13-Apr-2017 11:24:16 | ---> ee0620fca904 |
| 13-Apr-2017 11:24:16 | Removing intermediate container b55f23cdab57 |
| 13-Apr-2017 11:24:16 | Step 11/11 : CMD extractor |
| 13-Apr-2017 11:24:16 | ---> Running in a59187e3a5db |
| 13-Apr-2017 11:24:16 | ---> 776a615243cb |
| 13-Apr-2017 11:24:16 | Removing intermediate container a59187e3a5db |
| 13-Apr-2017 11:24:16 | Successfully built 776a615243cb |
| 13-Apr-2017 11:24:16 | The push refers to a repository [docker.io/clowder/extractors-msc-monitor] |
| 13-Apr-2017 11:24:16 | df9d07df8405: Preparing |
| 13-Apr-2017 11:24:16 | 1687def61c7d: Preparing |
| 13-Apr-2017 11:24:16 | 2df1b7187a19: Preparing |
| 13-Apr-2017 11:24:16 | de586ccf9c4a: Preparing |
| 13-Apr-2017 11:24:16 | 5e269aa11a2f: Preparing |
| 13-Apr-2017 11:24:16 | 7d760664bbad: Preparing |
| 13-Apr-2017 11:24:16 | a2688f6622a7: Preparing |
| 13-Apr-2017 11:24:16 | e24a372680fc: Preparing |
| 13-Apr-2017 11:24:16 | 5eb5bd4c5014: Preparing |
| 13-Apr-2017 11:24:16 | d195a7a18c70: Preparing |
| 13-Apr-2017 11:24:16 | af605e724c5a: Preparing |
| 13-Apr-2017 11:24:16 | 59f161c3069d: Preparing |
| 13-Apr-2017 11:24:16 | 4f03495a4d7d: Preparing |
| 13-Apr-2017 11:24:16 | 5eb5bd4c5014: Waiting |
| 13-Apr-2017 11:24:16 | 7d760664bbad: Waiting |
| 13-Apr-2017 11:24:16 | a2688f6622a7: Waiting |
| 13-Apr-2017 11:24:16 | e24a372680fc: Waiting |
| 13-Apr-2017 11:24:16 | d195a7a18c70: Waiting |
| 13-Apr-2017 11:24:16 | 59f161c3069d: Waiting |
| 13-Apr-2017 11:24:16 | af605e724c5a: Waiting |
| 13-Apr-2017 11:24:16 | 4f03495a4d7d: Waiting |
| 13-Apr-2017 11:24:17 | 5e269aa11a2f: Mounted from clowder/extractors-msc-chemcbc |
| 13-Apr-2017 11:24:17 | 7d760664bbad: Mounted from clowder/extractors-msc-chemcbc |
| 13-Apr-2017 11:24:18 | a2688f6622a7: Mounted from clowder/extractors-msc-chemcbc |
| 13-Apr-2017 11:24:18 | df9d07df8405: Pushed |
| 13-Apr-2017 11:24:18 | de586ccf9c4a: Pushed |
| 13-Apr-2017 11:24:18 | 5eb5bd4c5014: Mounted from clowder/extractors-msc-chemcbc |
| 13-Apr-2017 11:24:18 | e24a372680fc: Mounted from clowder/extractors-msc-chemcbc |
| 13-Apr-2017 11:24:19 | 2df1b7187a19: Pushed |
| 13-Apr-2017 11:24:19 | d195a7a18c70: Mounted from clowder/extractors-msc-chemcbc |
| 13-Apr-2017 11:24:19 | 59f161c3069d: Mounted from clowder/extractors-msc-chemcbc |
| 13-Apr-2017 11:24:19 | af605e724c5a: Mounted from clowder/extractors-msc-chemcbc |
| 13-Apr-2017 11:24:19 | 1687def61c7d: Pushed |
| 13-Apr-2017 11:24:19 | 4f03495a4d7d: Mounted from clowder/extractors-msc-chemcbc |
| 13-Apr-2017 11:24:21 | master: digest: sha256:70ce8595532dde51de7778847162fbbc8ab8ce320f2e302590a2ac72e207b92a size: 3031 |
| 13-Apr-2017 11:24:21 | The push refers to a repository [docker.io/clowder/extractors-msc-monitor] |
| 13-Apr-2017 11:24:21 | df9d07df8405: Preparing |
| 13-Apr-2017 11:24:21 | 1687def61c7d: Preparing |
| 13-Apr-2017 11:24:21 | 2df1b7187a19: Preparing |
| 13-Apr-2017 11:24:21 | de586ccf9c4a: Preparing |
| 13-Apr-2017 11:24:21 | 5e269aa11a2f: Preparing |
| 13-Apr-2017 11:24:21 | 7d760664bbad: Preparing |
| 13-Apr-2017 11:24:21 | a2688f6622a7: Preparing |
| 13-Apr-2017 11:24:21 | e24a372680fc: Preparing |
| 13-Apr-2017 11:24:21 | 5eb5bd4c5014: Preparing |
| 13-Apr-2017 11:24:21 | d195a7a18c70: Preparing |
| 13-Apr-2017 11:24:21 | af605e724c5a: Preparing |
| 13-Apr-2017 11:24:21 | 59f161c3069d: Preparing |
| 13-Apr-2017 11:24:21 | 4f03495a4d7d: Preparing |
| 13-Apr-2017 11:24:21 | a2688f6622a7: Waiting |
| 13-Apr-2017 11:24:21 | e24a372680fc: Waiting |
| 13-Apr-2017 11:24:21 | 7d760664bbad: Waiting |
| 13-Apr-2017 11:24:21 | 5eb5bd4c5014: Waiting |
| 13-Apr-2017 11:24:21 | d195a7a18c70: Waiting |
| 13-Apr-2017 11:24:21 | af605e724c5a: Waiting |
| 13-Apr-2017 11:24:21 | 59f161c3069d: Waiting |
| 13-Apr-2017 11:24:21 | 4f03495a4d7d: Waiting |
| 13-Apr-2017 11:24:22 | df9d07df8405: Layer already exists |
| 13-Apr-2017 11:24:22 | 5e269aa11a2f: Layer already exists |
| 13-Apr-2017 11:24:22 | de586ccf9c4a: Layer already exists |
| 13-Apr-2017 11:24:22 | 2df1b7187a19: Layer already exists |
| 13-Apr-2017 11:24:22 | 1687def61c7d: Layer already exists |
| 13-Apr-2017 11:24:22 | 7d760664bbad: Layer already exists |
| 13-Apr-2017 11:24:22 | a2688f6622a7: Layer already exists |
| 13-Apr-2017 11:24:22 | e24a372680fc: Layer already exists |
| 13-Apr-2017 11:24:22 | 5eb5bd4c5014: Layer already exists |
| 13-Apr-2017 11:24:22 | d195a7a18c70: Layer already exists |
| 13-Apr-2017 11:24:22 | af605e724c5a: Layer already exists |
| 13-Apr-2017 11:24:22 | 59f161c3069d: Layer already exists |
| 13-Apr-2017 11:24:22 | 4f03495a4d7d: Layer already exists |
| 13-Apr-2017 11:24:23 | latest: digest: sha256:70ce8595532dde51de7778847162fbbc8ab8ce320f2e302590a2ac72e207b92a size: 3031 |
| 13-Apr-2017 11:24:23 | Untagged: 13148:latest |
| 13-Apr-2017 11:24:23 | Sending build context to Docker daemon 12.1 MB |
| 13-Apr-2017 11:24:23 | |
| 13-Apr-2017 11:24:23 | Step 1/11 : FROM clowder/pyclowder:1 |
| 13-Apr-2017 11:24:23 | ---> 2dd17798784b |
| 13-Apr-2017 11:24:23 | Step 2/11 : MAINTAINER Yan Zhao <yanzhao3@illinois.edu> |
| 13-Apr-2017 11:24:23 | ---> Using cache |
| 13-Apr-2017 11:24:23 | ---> bc9047907227 |
| 13-Apr-2017 11:24:23 | Step 3/11 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_VHOST "%2F" RABBITMQ_QUEUE "ncsa.msc.PhenotypeExtractor" MONGO_URI "" DB_USERNAME "" DB_PASSWORD "" MAIN_SCRIPT "extractor-Phenotype.py" |
| 13-Apr-2017 11:24:23 | ---> Using cache |
| 13-Apr-2017 11:24:23 | ---> 5f5007e3b206 |
| 13-Apr-2017 11:24:23 | Step 4/11 : USER root |
| 13-Apr-2017 11:24:23 | ---> Using cache |
| 13-Apr-2017 11:24:23 | ---> 0a6e79b664c6 |
| 13-Apr-2017 11:24:23 | Step 5/11 : COPY requirements.txt /home/clowder/ |
| 13-Apr-2017 11:24:23 | ---> Using cache |
| 13-Apr-2017 11:24:23 | ---> 7bacfaeeca18 |
| 13-Apr-2017 11:24:23 | Step 6/11 : RUN pip install --upgrade pip |
| 13-Apr-2017 11:24:23 | ---> Using cache |
| 13-Apr-2017 11:24:23 | ---> af96bba085db |
| 13-Apr-2017 11:24:23 | Step 7/11 : RUN pip install -r /home/clowder/requirements.txt |
| 13-Apr-2017 11:24:23 | ---> Using cache |
| 13-Apr-2017 11:24:23 | ---> b7818941ea67 |
| 13-Apr-2017 11:24:23 | Step 8/11 : USER clowder |
| 13-Apr-2017 11:24:23 | ---> Using cache |
| 13-Apr-2017 11:24:23 | ---> f81f136db980 |
| 13-Apr-2017 11:24:23 | Step 9/11 : COPY entrypoint.sh *.py *.json /home/clowder/ |
| 13-Apr-2017 11:24:24 | ---> 4759a7b18e70 |
| 13-Apr-2017 11:24:24 | Removing intermediate container 8d9fffc2536e |
| 13-Apr-2017 11:24:24 | Step 10/11 : ENTRYPOINT /home/clowder/entrypoint.sh |
| 13-Apr-2017 11:24:24 | ---> Running in cb8853e5a24f |
| 13-Apr-2017 11:24:24 | ---> 3ccc5564c5a1 |
| 13-Apr-2017 11:24:24 | Removing intermediate container cb8853e5a24f |
| 13-Apr-2017 11:24:24 | Step 11/11 : CMD extractor |
| 13-Apr-2017 11:24:24 | ---> Running in 9e79656c1569 |
| 13-Apr-2017 11:24:24 | ---> 74a6e7ef4110 |
| 13-Apr-2017 11:24:24 | Removing intermediate container 9e79656c1569 |
| 13-Apr-2017 11:24:24 | Successfully built 74a6e7ef4110 |
| 13-Apr-2017 11:24:24 | The push refers to a repository [docker.io/clowder/extractors-msc-phenotype] |
| 13-Apr-2017 11:24:24 | 7c148820c5f8: Preparing |
| 13-Apr-2017 11:24:24 | 9ee39071d09d: Preparing |
| 13-Apr-2017 11:24:24 | 6bece1ab73e7: Preparing |
| 13-Apr-2017 11:24:24 | 1ad5df38e0be: Preparing |
| 13-Apr-2017 11:24:24 | 5e269aa11a2f: Preparing |
| 13-Apr-2017 11:24:24 | 7d760664bbad: Preparing |
| 13-Apr-2017 11:24:24 | a2688f6622a7: Preparing |
| 13-Apr-2017 11:24:24 | e24a372680fc: Preparing |
| 13-Apr-2017 11:24:24 | 5eb5bd4c5014: Preparing |
| 13-Apr-2017 11:24:24 | d195a7a18c70: Preparing |
| 13-Apr-2017 11:24:24 | af605e724c5a: Preparing |
| 13-Apr-2017 11:24:24 | 59f161c3069d: Preparing |
| 13-Apr-2017 11:24:24 | 4f03495a4d7d: Preparing |
| 13-Apr-2017 11:24:24 | 5eb5bd4c5014: Waiting |
| 13-Apr-2017 11:24:24 | d195a7a18c70: Waiting |
| 13-Apr-2017 11:24:24 | af605e724c5a: Waiting |
| 13-Apr-2017 11:24:24 | 59f161c3069d: Waiting |
| 13-Apr-2017 11:24:24 | 7d760664bbad: Waiting |
| 13-Apr-2017 11:24:24 | 4f03495a4d7d: Waiting |
| 13-Apr-2017 11:24:24 | a2688f6622a7: Waiting |
| 13-Apr-2017 11:24:24 | e24a372680fc: Waiting |
| 13-Apr-2017 11:24:25 | 5e269aa11a2f: Mounted from clowder/extractors-msc-monitor |
| 13-Apr-2017 11:24:25 | 7d760664bbad: Mounted from clowder/extractors-msc-monitor |
| 13-Apr-2017 11:24:26 | a2688f6622a7: Mounted from clowder/extractors-msc-monitor |
| 13-Apr-2017 11:24:26 | 1ad5df38e0be: Pushed |
| 13-Apr-2017 11:24:26 | e24a372680fc: Mounted from clowder/extractors-msc-monitor |
| 13-Apr-2017 11:24:27 | 6bece1ab73e7: Pushed |
| 13-Apr-2017 11:24:27 | d195a7a18c70: Mounted from clowder/extractors-msc-monitor |
| 13-Apr-2017 11:24:27 | 5eb5bd4c5014: Mounted from clowder/extractors-msc-monitor |
| 13-Apr-2017 11:24:27 | 59f161c3069d: Mounted from clowder/extractors-msc-monitor |
| 13-Apr-2017 11:24:27 | af605e724c5a: Mounted from clowder/extractors-msc-monitor |
| 13-Apr-2017 11:24:27 | 9ee39071d09d: Pushed |
| 13-Apr-2017 11:24:27 | 7c148820c5f8: Pushed |
| 13-Apr-2017 11:24:28 | 4f03495a4d7d: Mounted from clowder/extractors-msc-monitor |
| 13-Apr-2017 11:24:30 | master: digest: sha256:a70117e6dc272f2d0cd2e763768f9fdbb81cabc247bf354099021e85b341ec3d size: 3031 |
| 13-Apr-2017 11:24:30 | The push refers to a repository [docker.io/clowder/extractors-msc-phenotype] |
| 13-Apr-2017 11:24:30 | 7c148820c5f8: Preparing |
| 13-Apr-2017 11:24:30 | 9ee39071d09d: Preparing |
| 13-Apr-2017 11:24:30 | 6bece1ab73e7: Preparing |
| 13-Apr-2017 11:24:30 | 1ad5df38e0be: Preparing |
| 13-Apr-2017 11:24:30 | 5e269aa11a2f: Preparing |
| 13-Apr-2017 11:24:30 | 7d760664bbad: Preparing |
| 13-Apr-2017 11:24:30 | a2688f6622a7: Preparing |
| 13-Apr-2017 11:24:30 | e24a372680fc: Preparing |
| 13-Apr-2017 11:24:30 | 5eb5bd4c5014: Preparing |
| 13-Apr-2017 11:24:30 | d195a7a18c70: Preparing |
| 13-Apr-2017 11:24:30 | af605e724c5a: Preparing |
| 13-Apr-2017 11:24:30 | 59f161c3069d: Preparing |
| 13-Apr-2017 11:24:30 | 4f03495a4d7d: Preparing |
| 13-Apr-2017 11:24:30 | 7d760664bbad: Waiting |
| 13-Apr-2017 11:24:30 | a2688f6622a7: Waiting |
| 13-Apr-2017 11:24:30 | e24a372680fc: Waiting |
| 13-Apr-2017 11:24:30 | 5eb5bd4c5014: Waiting |
| 13-Apr-2017 11:24:30 | d195a7a18c70: Waiting |
| 13-Apr-2017 11:24:30 | af605e724c5a: Waiting |
| 13-Apr-2017 11:24:30 | 59f161c3069d: Waiting |
| 13-Apr-2017 11:24:30 | 4f03495a4d7d: Waiting |
| 13-Apr-2017 11:24:30 | 1ad5df38e0be: Layer already exists |
| 13-Apr-2017 11:24:30 | 7c148820c5f8: Layer already exists |
| 13-Apr-2017 11:24:30 | 9ee39071d09d: Layer already exists |
| 13-Apr-2017 11:24:30 | 5e269aa11a2f: Layer already exists |
| 13-Apr-2017 11:24:30 | 6bece1ab73e7: Layer already exists |
| 13-Apr-2017 11:24:30 | e24a372680fc: Layer already exists |
| 13-Apr-2017 11:24:30 | d195a7a18c70: Layer already exists |
| 13-Apr-2017 11:24:30 | 7d760664bbad: Layer already exists |
| 13-Apr-2017 11:24:30 | 5eb5bd4c5014: Layer already exists |
| 13-Apr-2017 11:24:30 | a2688f6622a7: Layer already exists |
| 13-Apr-2017 11:24:30 | af605e724c5a: Layer already exists |
| 13-Apr-2017 11:24:30 | 59f161c3069d: Layer already exists |
| 13-Apr-2017 11:24:31 | 4f03495a4d7d: Layer already exists |
| 13-Apr-2017 11:24:31 | latest: digest: sha256:a70117e6dc272f2d0cd2e763768f9fdbb81cabc247bf354099021e85b341ec3d size: 3031 |
| 13-Apr-2017 11:24:31 | Untagged: 13148:latest |
| 13-Apr-2017 11:24:31 | Finished task 'docker build' with result: Success |
| 13-Apr-2017 11:24:31 | Running post build plugin 'Docker Container Cleanup' |
| 13-Apr-2017 11:24:31 | Running post build plugin 'NCover Results Collector' |
| 13-Apr-2017 11:24:31 | Running post build plugin 'Clover Results Collector' |
| 13-Apr-2017 11:24:31 | Running post build plugin 'npm Cache Cleanup' |
| 13-Apr-2017 11:24:31 | Running post build plugin 'Artifact Copier' |
| 13-Apr-2017 11:24:31 | Finalising the build... |
| 13-Apr-2017 11:24:31 | Stopping timer. |
| 13-Apr-2017 11:24:31 | Build CATS-MSC1-JOB1-3 completed. |
| 13-Apr-2017 11:24:31 | Running on server: post build plugin 'NCover Results Collector' |
| 13-Apr-2017 11:24:31 | Running on server: post build plugin 'Build Hanging Detection Configuration' |
| 13-Apr-2017 11:24:31 | Running on server: post build plugin 'Clover Delta Calculator' |
| 13-Apr-2017 11:24:31 | Running on server: post build plugin 'Maven Dependencies Postprocessor' |
| 13-Apr-2017 11:24:31 | All post build plugins have finished |
| 13-Apr-2017 11:24:31 | Generating build results summary... |
| 13-Apr-2017 11:24:31 | Saving build results to disk... |
| 13-Apr-2017 11:24:31 | Logging substituted variables... |
| 13-Apr-2017 11:24:31 | Indexing build results... |
| 13-Apr-2017 11:24:31 | Finished building CATS-MSC1-JOB1-3. |