Build #70

Plan branch:
Next Generation of pyClowder

Build: #70 was successful

Job: Default Job was successful

Stages & jobs

  1. Default Stage

Build log

The build generated 195 lines of output. Download or view full build log.

18-Apr-2018 16:45:34 Build Clowder - pyclowder2 - Default Job #70 (CATS-PYC2-JOB1-70) started building on agent buildserver-1.os.ncsa.edu
18-Apr-2018 16:45:34 Remote agent on host buildserver-1.os.ncsa.edu
18-Apr-2018 16:45:34 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC2-JOB1
18-Apr-2018 16:45:34 Executing build Clowder - pyclowder2 - Default Job #70 (CATS-PYC2-JOB1-70)
18-Apr-2018 16:45:34 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
18-Apr-2018 16:45:34 Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC2-JOB1
18-Apr-2018 16:45:34 Updating source code to revision: a8d8eac940bc94eafbb0514ca11a7fbd1fd1b1f0
18-Apr-2018 16:45:34 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC2-JOB1/.git'.
18-Apr-2018 16:45:34 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC2-JOB1/.git/
18-Apr-2018 16:45:34 Fetching 'refs/heads/master' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git'. Will try to do a shallow fetch.
18-Apr-2018 16:45:34 Warning: Permanently added '[127.0.0.1]:34990' (RSA) to the list of known hosts.
18-Apr-2018 16:45:34 From ssh://127.0.0.1:34990/cats/pyclowder2
18-Apr-2018 16:45:34 * [new branch]      master     -> master
18-Apr-2018 16:45:34 Checking out revision a8d8eac940bc94eafbb0514ca11a7fbd1fd1b1f0.
18-Apr-2018 16:45:34 Already on 'master'
18-Apr-2018 16:45:34 Updated source code to revision: a8d8eac940bc94eafbb0514ca11a7fbd1fd1b1f0
18-Apr-2018 16:45:34 Finished task 'Checkout Default Repository' with result: Success
18-Apr-2018 16:45:34 Running pre-build action: VCS Version Collector
18-Apr-2018 16:45:34 Starting task 'pytest' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
18-Apr-2018 16:45:34
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18-Apr-2018 16:45:35 New python executable in /tmp/virtualenv/pyclowder2/bin/python2
18-Apr-2018 16:45:35 Also creating executable in /tmp/virtualenv/pyclowder2/bin/python
18-Apr-2018 16:45:37 Installing setuptools, pkg_resources, pip, wheel...done.
18-Apr-2018 16:45:37 Running virtualenv with interpreter /usr/bin/python2
18-Apr-2018 16:45:37 Collecting enum34==1.1.6 (from -r requirements.txt (line 1))
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18-Apr-2018 16:45:37 Collecting pika==0.11.2 (from -r requirements.txt (line 2))
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18-Apr-2018 16:45:37 Collecting PyYAML==3.12 (from -r requirements.txt (line 3))
18-Apr-2018 16:45:37 Collecting requests==2.18.4 (from -r requirements.txt (line 4))
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18-Apr-2018 16:45:37 Collecting wheel==0.24.0 (from -r requirements.txt (line 5))
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18-Apr-2018 16:45:38   Found existing installation: wheel 0.31.0
18-Apr-2018 16:45:38     Uninstalling wheel-0.31.0:
18-Apr-2018 16:45:38       Successfully uninstalled wheel-0.31.0
18-Apr-2018 16:45:39 Successfully installed PyYAML-3.12 apipkg-1.4 certifi-2018.4.16 chardet-3.0.4 enum34-1.1.6 execnet-1.5.0 idna-2.6 pep8-1.7.1 pika-0.11.2 py-1.5.3 pytest-3.0.3 pytest-cache-1.0 pytest-pep8-1.0.6 requests-2.18.4 urllib3-1.22 wheel-0.24.0
18-Apr-2018 16:45:39 ============================= test session starts ==============================
18-Apr-2018 16:45:39 platform linux2 -- Python 2.7.12, pytest-3.0.3, py-1.5.3, pluggy-0.4.0
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18-Apr-2018 16:45:39 plugins: pep8-1.0.6
18-Apr-2018 16:45:39 collected 16 items
18-Apr-2018 16:45:39
18-Apr-2018 16:45:39 setup.py .
18-Apr-2018 16:45:39 docs/source/conf.py .
18-Apr-2018 16:45:39 pyclowder/__init__.py .
18-Apr-2018 16:45:39 pyclowder/client.py .
18-Apr-2018 16:45:39 pyclowder/collections.py .
18-Apr-2018 16:45:39 pyclowder/connectors.py .
18-Apr-2018 16:45:39 pyclowder/datasets.py .
18-Apr-2018 16:45:39 pyclowder/extractors.py .
18-Apr-2018 16:45:39 pyclowder/files.py .
18-Apr-2018 16:45:39 pyclowder/geostreams.py .
18-Apr-2018 16:45:39 pyclowder/sections.py .
18-Apr-2018 16:45:39 pyclowder/utils.py .
18-Apr-2018 16:45:39 sample-extractors/binary-preview/binary_extractor.py .
18-Apr-2018 16:45:39 sample-extractors/echo/echo.py .
18-Apr-2018 16:45:39 sample-extractors/wordcount/wordcount.py .
18-Apr-2018 16:45:39 tests/clientTest.py .
18-Apr-2018 16:45:39
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18-Apr-2018 16:45:39 ========================== 16 passed in 0.33 seconds ===========================
18-Apr-2018 16:45:39 Finished task 'pytest' with result: Success
18-Apr-2018 16:45:39 Starting task 'docker build and push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
18-Apr-2018 16:45:39
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bamboo_planKey=CATS-PYC2
bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git
bamboo_planRepository_username=
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_repository_118947887_previous_revision_number=0ccb9308244a22803659e3aa24bfb3b7318dee18
bamboo_planRepository_1_branchName=master
18-Apr-2018 16:45:39 Sending build context to Docker daemon    212kB
18-Apr-2018 16:45:39
18-Apr-2018 16:45:40 Step 1/8 : FROM ubuntu:16.04
18-Apr-2018 16:45:40 ---> c9d990395902
18-Apr-2018 16:45:40 Step 2/8 : ENV RABBITMQ_URI="amqp://guest:guest@rabbitmq:5672/%2F"     RABBITMQ_EXCHANGE="clowder"     RABBITMQ_QUEUE=""     REGISTRATION_ENDPOINTS="https://clowder.ncsa.illinois.edu/extractors"     MAIN_SCRIPT=""
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> 5c9ccfd18309
18-Apr-2018 16:45:40 Step 3/8 : RUN apt-get -q -q update && apt-get install -y --no-install-recommends         python         python-pip     && pip install --upgrade setuptools     && rm -rf /var/lib/apt/lists/*
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> fb04c0d2a389
18-Apr-2018 16:45:40 Step 4/8 : COPY pyclowder /tmp/pyclowder/pyclowder
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> 93abe67397b9
18-Apr-2018 16:45:40 Step 5/8 : COPY setup.py description.rst /tmp/pyclowder/
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> e09554111e4b
18-Apr-2018 16:45:40 Step 6/8 : RUN pip install --upgrade /tmp/pyclowder     && rm -rf /tmp/pyclowder
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> 792462113402
18-Apr-2018 16:45:40 Step 7/8 : WORKDIR /home/clowder
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> 599e55d54abe
18-Apr-2018 16:45:40 Step 8/8 : CMD python "./${MAIN_SCRIPT}"
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> f2d8b51eccc3
18-Apr-2018 16:45:40 Successfully built f2d8b51eccc3
18-Apr-2018 16:45:40 Successfully tagged clowder/pyclowder:latest
18-Apr-2018 16:45:40 Sending build context to Docker daemon  210.4kB
18-Apr-2018 16:45:40
18-Apr-2018 16:45:40 Step 1/6 : FROM clowder/pyclowder
18-Apr-2018 16:45:40 ---> f2d8b51eccc3
18-Apr-2018 16:45:40 Step 2/6 : ONBUILD COPY packages.* Dockerfile /home/clowder/
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> 443eaee61a66
18-Apr-2018 16:45:40 Step 3/6 : ONBUILD RUN if [ -e packages.apt ]; then                 apt-get -q -q update                 && xargs apt-get -y install --no-install-recommends < packages.apt                 && rm -rf /var/lib/apt/lists/*;             fi
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> ddf4a6edd31c
18-Apr-2018 16:45:40 Step 4/6 : ONBUILD COPY requirements.txt* Dockerfile /home/clowder/
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> ae50c07cbd4a
18-Apr-2018 16:45:40 Step 5/6 : ONBUILD RUN if [ -e requirements.txt ]; then                 pip install --no-cache-dir -r requirements.txt;             fi
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> 5ced522ecf95
18-Apr-2018 16:45:40 Step 6/6 : ONBUILD ADD . /home/clowder/
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> a346ec5464c4
18-Apr-2018 16:45:40 Successfully built a346ec5464c4
18-Apr-2018 16:45:40 Successfully tagged clowder/pyclowder:onbuild
18-Apr-2018 16:45:40 Sending build context to Docker daemon  12.29kB
18-Apr-2018 16:45:40
18-Apr-2018 16:45:40 Step 1/5 : FROM clowder/pyclowder:onbuild
18-Apr-2018 16:45:40 # Executing 5 build triggers
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> c8577eca2eb0
18-Apr-2018 16:45:40 Step 2/5 : ENV MAIN_SCRIPT="binary_extractor.py"     RABBITMQ_QUEUE=""     IMAGE_BINARY=""     IMAGE_TYPE=""     IMAGE_THUMBNAIL_COMMAND=""     IMAGE_PREVIEW_COMMAND=""     PREVIEW_BINARY=""     PREVIEW_TYPE=""     PREVIEW_COMMAND=""
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> 392c3bfc68b5
18-Apr-2018 16:45:40 Step 3/5 : ONBUILD COPY packages.* Dockerfile /home/clowder/
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> 575115af93e5
18-Apr-2018 16:45:40 Step 4/5 : ONBUILD RUN if [ -e packages.apt ]; then                 apt-get -q -q update                 && xargs apt-get -y install --no-install-recommends < packages.apt                 && rm -rf /var/lib/apt/lists/*;             fi
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> e2fa16ed5637
18-Apr-2018 16:45:40 Step 5/5 : ONBUILD COPY extractor_info.json /home/clowder/
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> 9fd358a66c21
18-Apr-2018 16:45:40 Successfully built 9fd358a66c21
18-Apr-2018 16:45:40 Successfully tagged clowder/extractors-binary-preview:onbuild
18-Apr-2018 16:45:40 Sending build context to Docker daemon  9.216kB
18-Apr-2018 16:45:40
18-Apr-2018 16:45:40 Step 1/2 : FROM clowder/pyclowder:onbuild
18-Apr-2018 16:45:40 # Executing 5 build triggers
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> 0227191b5a17
18-Apr-2018 16:45:40 Step 2/2 : ENV MAIN_SCRIPT="wordcount.py"
18-Apr-2018 16:45:40 ---> Using cache
18-Apr-2018 16:45:40 ---> d177468074f1
18-Apr-2018 16:45:40 Successfully built d177468074f1
18-Apr-2018 16:45:40 Successfully tagged clowder/extractors-wordcount:latest
18-Apr-2018 16:45:40 Finished task 'docker build and push' with result: Success
18-Apr-2018 16:45:40 Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit'
18-Apr-2018 16:45:40 Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC2-JOB1...
18-Apr-2018 16:45:40 Finished task 'test results' with result: Success
18-Apr-2018 16:45:40 Running post build plugin 'Docker Container Cleanup'
18-Apr-2018 16:45:40 Running post build plugin 'NCover Results Collector'
18-Apr-2018 16:45:40 Running post build plugin 'Clover Results Collector'
18-Apr-2018 16:45:40 Running post build plugin 'npm Cache Cleanup'
18-Apr-2018 16:45:40 Running post build plugin 'Artifact Copier'
18-Apr-2018 16:45:40 Finalising the build...
18-Apr-2018 16:45:40 Stopping timer.
18-Apr-2018 16:45:40 Build CATS-PYC2-JOB1-70 completed.
18-Apr-2018 16:45:40 Running on server: post build plugin 'NCover Results Collector'
18-Apr-2018 16:45:40 Running on server: post build plugin 'Build Hanging Detection Configuration'
18-Apr-2018 16:45:40 Running on server: post build plugin 'Clover Delta Calculator'
18-Apr-2018 16:45:40 Running on server: post build plugin 'Maven Dependencies Postprocessor'
18-Apr-2018 16:45:40 All post build plugins have finished
18-Apr-2018 16:45:40 Generating build results summary...
18-Apr-2018 16:45:40 Saving build results to disk...
18-Apr-2018 16:45:40 Logging substituted variables...
18-Apr-2018 16:45:40 Indexing build results...
18-Apr-2018 16:45:40 Finished building CATS-PYC2-JOB1-70.